View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21081_low_17 (Length: 266)
Name: NF21081_low_17
Description: NF21081
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21081_low_17 |
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Alignment Details
Target: chr5 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 6227155 - 6227410
Alignment:
| Q |
1 |
ccagttattcgtgttgattatacacctccgattgcgggtatgtttgtaccctcatacctgaaggcttttgtgaaagagatgactactctgtcctccgatg |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6227155 |
ccagttattcgtgttgattatacacctccgattgcgggtatgtttgtacctccatacctgaaggcttttgtgaaagagatgactactctgtcctccgatg |
6227254 |
T |
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| Q |
101 |
acaagaacaagaattcttttctggtagtcgtaggcaacctcccgcccgagacaaggaaccatgatttgcttcaacttttccagccttttggtcatgtcat |
200 |
Q |
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|||||||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6227255 |
acaagaacaagaattcttttctggtagtaggaggcaacctcccacccgagacaaggaaccatgatttgcttcaacttttccagccttttggtcatgtcat |
6227354 |
T |
|
| Q |
201 |
cggtgccgatgttgctattgctcatcacactggccttagtggccgttttgcctttg |
256 |
Q |
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|||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
6227355 |
cggtgccgatattgctattgctcaacacactggccttagtggccgttttgcctttg |
6227410 |
T |
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