View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21081_low_9 (Length: 428)

Name: NF21081_low_9
Description: NF21081
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21081_low_9
NF21081_low_9
[»] chr5 (15 HSPs)
chr5 (209-405)||(3301352-3301544)
chr5 (209-410)||(3394209-3394405)
chr5 (209-400)||(1288176-1288363)
chr5 (209-400)||(20318499-20318686)
chr5 (211-399)||(24178033-24178217)
chr5 (209-400)||(1274773-1274960)
chr5 (209-400)||(2076061-2076248)
chr5 (209-400)||(10638806-10638992)
chr5 (209-379)||(28977444-28977610)
chr5 (209-303)||(16347989-16348083)
chr5 (209-327)||(12492974-12493088)
chr5 (209-303)||(27302534-27302628)
chr5 (209-267)||(36200419-36200477)
chr5 (209-258)||(43558401-43558450)
chr5 (209-358)||(17341788-17341933)
[»] chr4 (18 HSPs)
chr4 (209-400)||(23906888-23907075)
chr4 (209-400)||(48174680-48174867)
chr4 (209-400)||(56374798-56374985)
chr4 (209-400)||(435737-435924)
chr4 (209-400)||(31960401-31960588)
chr4 (213-410)||(27450764-27450957)
chr4 (209-400)||(1777602-1777789)
chr4 (209-400)||(53707302-53707489)
chr4 (209-379)||(39707986-39708152)
chr4 (209-398)||(48623114-48623299)
chr4 (209-303)||(33226810-33226904)
chr4 (211-410)||(16002412-16002622)
chr4 (209-303)||(47265791-47265885)
chr4 (210-258)||(30807244-30807292)
chr4 (209-387)||(10776006-10776180)
chr4 (209-250)||(50286625-50286666)
chr4 (209-267)||(55768964-55769022)
chr4 (209-267)||(55833220-55833278)
[»] chr7 (13 HSPs)
chr7 (209-375)||(32630140-32630302)
chr7 (209-400)||(33350393-33350580)
chr7 (209-400)||(37616424-37616611)
chr7 (209-400)||(46356438-46356625)
chr7 (209-400)||(36651502-36651689)
chr7 (209-400)||(31004732-31004918)
chr7 (209-376)||(49028799-49028962)
chr7 (209-410)||(36869876-36870073)
chr7 (209-400)||(39906966-39907153)
chr7 (209-374)||(38606540-38606700)
chr7 (209-400)||(11593461-11593655)
chr7 (209-410)||(24177782-24177979)
chr7 (209-321)||(48918975-48919083)
[»] chr2 (16 HSPs)
chr2 (209-410)||(41763636-41763833)
chr2 (209-400)||(2610036-2610223)
chr2 (209-410)||(24584193-24584390)
chr2 (209-410)||(45368211-45368409)
chr2 (209-400)||(452209-452390)
chr2 (209-369)||(4807131-4807287)
chr2 (209-405)||(30743126-30743318)
chr2 (236-400)||(12475035-12475195)
chr2 (209-400)||(38453207-38453392)
chr2 (209-341)||(11992693-11992821)
chr2 (209-334)||(8180354-8180475)
chr2 (209-304)||(13148913-13149008)
chr2 (209-303)||(3865673-3865767)
chr2 (209-267)||(37281746-37281804)
chr2 (209-258)||(876778-876827)
chr2 (209-268)||(3244238-3244292)
[»] chr6 (11 HSPs)
chr6 (209-405)||(10100444-10100636)
chr6 (209-411)||(5258737-5258935)
chr6 (209-410)||(9706274-9706471)
chr6 (209-403)||(5631322-5631512)
chr6 (209-410)||(20428223-20428421)
chr6 (236-410)||(30670386-30670556)
chr6 (229-410)||(33495705-33495882)
chr6 (305-410)||(2680729-2680834)
chr6 (209-267)||(3632653-3632711)
chr6 (209-387)||(27790677-27790851)
chr6 (209-247)||(2689313-2689351)
[»] chr1 (18 HSPs)
chr1 (209-405)||(32083332-32083524)
chr1 (209-400)||(43240968-43241155)
chr1 (209-400)||(51601566-51601753)
chr1 (209-400)||(8671428-8671615)
chr1 (209-400)||(51441351-51441538)
chr1 (209-400)||(49347980-49348168)
chr1 (209-327)||(1210326-1210440)
chr1 (305-410)||(7813993-7814097)
chr1 (209-376)||(37463452-37463612)
chr1 (212-303)||(27445499-27445590)
chr1 (209-257)||(40419328-40419376)
chr1 (209-301)||(46226899-46226991)
chr1 (209-260)||(34827689-34827740)
chr1 (209-258)||(6640772-6640821)
chr1 (209-250)||(19936175-19936216)
chr1 (209-258)||(28528227-28528276)
chr1 (221-258)||(32405083-32405120)
chr1 (213-257)||(7921574-7921618)
[»] scaffold0018 (1 HSPs)
scaffold0018 (211-400)||(30976-31161)
[»] chr3 (15 HSPs)
chr3 (209-410)||(25190877-25191074)
chr3 (209-400)||(47542298-47542485)
chr3 (209-379)||(52138357-52138523)
chr3 (209-400)||(51448296-51448483)
chr3 (209-410)||(19736664-19736861)
chr3 (209-410)||(38849592-38849789)
chr3 (209-303)||(19757669-19757763)
chr3 (209-387)||(27917093-27917267)
chr3 (244-410)||(19757482-19757644)
chr3 (209-357)||(9258434-9258574)
chr3 (209-385)||(29817028-29817200)
chr3 (209-248)||(28245093-28245132)
chr3 (209-258)||(1470684-1470733)
chr3 (209-258)||(48221430-48221479)
chr3 (209-257)||(26489964-26490012)
[»] chr8 (15 HSPs)
chr8 (209-400)||(12492429-12492616)
chr8 (209-410)||(42854591-42854797)
chr8 (209-400)||(36544660-36544847)
chr8 (209-400)||(36565828-36566015)
chr8 (209-402)||(15215857-15216046)
chr8 (212-335)||(4033084-4033203)
chr8 (278-371)||(13984167-13984256)
chr8 (209-296)||(8880021-8880108)
chr8 (209-258)||(18849702-18849751)
chr8 (211-260)||(29735461-29735510)
chr8 (209-257)||(43732231-43732279)
chr8 (209-252)||(45332074-45332117)
chr8 (209-267)||(13984672-13984730)
chr8 (209-258)||(25985188-25985235)
chr8 (209-258)||(41444891-41444940)
[»] scaffold0113 (1 HSPs)
scaffold0113 (209-376)||(12185-12348)
[»] scaffold0570 (1 HSPs)
scaffold0570 (209-303)||(2857-2951)
[»] scaffold0171 (1 HSPs)
scaffold0171 (209-261)||(5835-5887)
[»] scaffold0045 (1 HSPs)
scaffold0045 (213-398)||(88514-88702)
[»] scaffold0024 (1 HSPs)
scaffold0024 (209-261)||(82364-82416)
[»] scaffold0220 (1 HSPs)
scaffold0220 (342-374)||(24937-24969)


Alignment Details
Target: chr5 (Bit Score: 108; Significance: 4e-54; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 209 - 405
Target Start/End: Complemental strand, 3301544 - 3301352
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatataaatac 308  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||  | || |||||| ||||||||||||||||||    ||||    
T  3301544 tatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctccaaggtagacccacttctccttttgctgaagttacattccat----atac 3301449  T
Q  309 tccgtcttgcttcaactcaggtggaaatcatacacttataaggcttgtctccaggtctctaacctcccgtttaattccttccgcgactcaccaagca 405  Q
    ||||||||||||| ||||||| ||||| ||||| ||| ||||||||| ||||||||||||| |||||| |||||||||| || | ||||||||||||    
T  3301448 tccgtcttgcttctactcaggcggaaaccatactcttctaaggcttgcctccaggtctctagcctcccatttaattcctccctcaactcaccaagca 3301352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 209 - 410
Target Start/End: Complemental strand, 3394405 - 3394209
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatataaatac 308  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||  | || |||||| |||||| ||||||||||||||    |    
T  3394405 tatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctccaaggtagacccacttctccttttgctgaa-ttacattccatata----c 3394311  T
Q  309 tccgtcttgcttcaactcaggtggaaatcatacacttataaggcttgtctccaggtctctaacctcccgtttaattccttccgcgactcaccaagcacga 408  Q
    || |||||||||| ||||||| ||||| ||||| ||| ||||||||| ||||||||||||| |||||| ||||| |||| || |||||||||||||| ||    
T  3394310 tctgtcttgcttctactcaggcggaaaccatacgcttctaaggcttgcctccaggtctctagcctcccatttaactcctccctcgactcaccaagcaaga 3394211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 209 - 400
Target Start/End: Original strand, 1288176 - 1288363
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatataaatac 308  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| || |||||  ||||||||||||||||||    ||||    
T  1288176 tatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctccaaggtagacttacttctccttccgctgaagttacattccat----atac 1288271  T
Q  309 tccgtcttgcttcaactcaggtggaaatcatacacttataaggcttgtctccaggtctctaacctcccgtttaattccttccgcgactcacc 400  Q
    ||||||||||||| ||||| |  |||  ||||| ||| |||||||||||||||||||||||  |||||||| | ||||| || ||| |||||    
T  1288272 tccgtcttgcttctactcaagcagaatccatacgcttctaaggcttgtctccaggtctctagtctcccgttcacttcctccctcgaatcacc 1288363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 209 - 400
Target Start/End: Complemental strand, 20318686 - 20318499
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatataaatac 308  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||  || || |||||  ||||||||||||||||||    ||||    
T  20318686 tatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctccaaggtagaactacttctccttccgctgaagttacattccat----atac 20318591  T
Q  309 tccgtcttgcttcaactcaggtggaaatcatacacttataaggcttgtctccaggtctctaacctcccgtttaattccttccgcgactcacc 400  Q
    ||||||||||||| ||||| | ||||  ||||| ||| ||||||||| ||||||||||||| ||||||||| | ||||| || |||||||||    
T  20318590 tccgtcttgcttctactcaagcggaatccatacgcttctaaggcttgcctccaggtctctagcctcccgttcacttcctccctcgactcacc 20318499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 211 - 399
Target Start/End: Complemental strand, 24178217 - 24178033
Alignment:
Q  211 tttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatataaatactc 310  Q
    ||||||||||||||||| |||||| |||||||||||||||||||| ||||| |||||| || || |||||  ||||||||||||||||||    ||||||    
T  24178217 tttaaaccgtgtaacttagggtatgatatgatctccaactttcacttccaaggtagacctacttctccttccgctgaagttacattccat----atactc 24178122  T
Q  311 cgtcttgcttcaactcaggtggaaatcatacacttataaggcttgtctccaggtctctaacctcccgtttaattccttccgcgactcac 399  Q
    ||||||||||| ||||| | ||||  ||||||||| ||||||||| || |||||||||| ||||||||| | ||||| || ||||||||    
T  24178121 cgtcttgcttctactcaagcggaatccatacacttctaaggcttgccttcaggtctctagcctcccgttcacttcctccctcgactcac 24178033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 209 - 400
Target Start/End: Complemental strand, 1274960 - 1274773
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatataaatac 308  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||| || || |||||| ||||||||||||||||||    ||||    
T  1274960 tatttaaaccgtgtaacttggggtatgatatgatctccaactttcatctccaaggtagacctacttctcctttcgctgaagttacattccat----atac 1274865  T
Q  309 tccgtcttgcttcaactcaggtggaaatcatacacttataaggcttgtctccaggtctctaacctcccgtttaattccttccgcgactcacc 400  Q
    ||||||||||||| |||||   ||||  ||||| ||| ||||||||| ||||||||||||| ||||  ||| | ||||| || |||||||||    
T  1274864 tccgtcttgcttctactcaaccggaatccatacgcttctaaggcttgcctccaggtctctagcctcatgttcacttcctccctcgactcacc 1274773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 209 - 400
Target Start/End: Original strand, 2076061 - 2076248
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatataaatac 308  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||  |  || |||||  ||||||||||||||||||     |||    
T  2076061 tatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctccaaggtagaactgcttctccttccgctgaagttacattccat----gtac 2076156  T
Q  309 tccgtcttgcttcaactcaggtggaaatcatacacttataaggcttgtctccaggtctctaacctcccgtttaattccttccgcgactcacc 400  Q
    || |||||||||| ||||| | ||||  ||||| ||| ||||||||| |||||| |||||| ||||||||| | ||||| ||  ||||||||    
T  2076157 tctgtcttgcttctactcaagcggaatccatacgcttctaaggcttgcctccagctctctagcctcccgttcacttcctcccttgactcacc 2076248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 209 - 400
Target Start/End: Complemental strand, 10638992 - 10638806
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatataaatac 308  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||||||| |||||| || || |||||   ||||||||||||||||||||    |    
T  10638992 tatttaaaccgtgtaacttggggtatgatatgatttccaactttcacctccaaggtagacctacttctccttccactgaagttacattccatata----c 10638897  T
Q  309 tccgtcttgcttcaactcaggtggaaatcatacacttataaggcttgtctccaggtctctaacctcccgtttaattccttccgcgactcacc 400  Q
    |||||||| |||| ||||| | | ||  ||||| ||| ||||||||| ||||||||||||| ||| ||||| | ||||| || |||||||||    
T  10638896 tccgtctttcttctactcaagcg-aatccatacgcttctaaggcttgcctccaggtctctagcctaccgttcacttcctccctcgactcacc 10638806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 209 - 379
Target Start/End: Original strand, 28977444 - 28977610
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatataaatac 308  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||| || |||||| || || |||||  | ||||||||||||||||    ||||    
T  28977444 tatttaaaccgtgtgacttggggtatgatatgatctccaactttcacctctaaggtagacctacttctccttccgttgaagttacattccat----atac 28977539  T
Q  309 tccgtcttgcttcaactcaggtggaaatcatacacttataaggcttgtctccaggtctctaacctcccgtt 379  Q
    ||||||||||||| ||||| | ||||  ||||| ||| ||||||||| ||||||| || || |||||||||    
T  28977540 tccgtcttgcttctactcaagcggaatccatacgcttctaaggcttgcctccaggcctatagcctcccgtt 28977610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 209 - 303
Target Start/End: Original strand, 16347989 - 16348083
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatata 303  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| || || |||||| |||||||||||||| ||||||    
T  16347989 tatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctccaaggtagacctacttctccttttgctgaagttacatttcatata 16348083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 12492974 - 12493088
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatataaatac 308  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||  || || |||||  ||||||||||||||||||    ||||    
T  12492974 tatttaaaccgtgtaacttggggtatgatatgatctccaacttttacctccaaggtagagctacttctccttccgctgaagttacattccat----atac 12493069  T
Q  309 tccgtcttgcttcaactca 327  Q
    ||||||||||||| |||||    
T  12493070 tccgtcttgcttctactca 12493088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 209 - 303
Target Start/End: Original strand, 27302534 - 27302628
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatata 303  Q
    |||||||||||||||  ||| ||||| ||||||||||||||  |||||| ||| |||||  || ||| ||||| | |||||||||||||||||||    
T  27302534 tatttaaaccgtgtagtttgaggtatgatatgatctccaacactcaccttcaaggtagaactactttaccttttgttgaagttacattccatata 27302628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 209 - 267
Target Start/End: Complemental strand, 36200477 - 36200419
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtaga 267  Q
    ||||||||| |||||||||| ||||| |||||| |||| ||||||||||||| ||||||    
T  36200477 tatttaaacggtgtaacttgaggtatgatatgacctcccactttcacctccatagtaga 36200419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 209 - 258
Target Start/End: Original strand, 43558401 - 43558450
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctc 258  Q
    |||||||| ||||||||||| |||||  ||||||||||||||||||||||    
T  43558401 tatttaaatcgtgtaacttgtggtatgctatgatctccaactttcacctc 43558450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 358
Target Start/End: Original strand, 17341788 - 17341933
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatataaatac 308  Q
    |||||||||| ||||| ||  ||||| |||||||||||||||| ||||||||| |||||   | ||  |||||  || ||||||||||||||    ||||    
T  17341788 tatttaaaccatgtaatttcaggtatgatatgatctccaacttccacctccaaggtagaaccatttggcctttttctaaagttacattccat----atac 17341883  T
Q  309 tccgtcttgcttcaactcaggtggaaatcatacacttataaggcttgtct 358  Q
    ||  | ||||||| | ||||| | ||| ||||||||||| ||||||||||    
T  17341884 tcaattttgcttctattcaggcgaaaaccatacacttatgaggcttgtct 17341933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 95; Significance: 2e-46; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 209 - 400
Target Start/End: Original strand, 23906888 - 23907075
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatataaatac 308  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| || || |||||  | ||||||||||||||||    ||||    
T  23906888 tatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctccaaggtagacctacttctccttccgttgaagttacattccat----atac 23906983  T
Q  309 tccgtcttgcttcaactcaggtggaaatcatacacttataaggcttgtctccaggtctctaacctcccgtttaattccttccgcgactcacc 400  Q
    ||||||||||||| ||||| | ||||  ||||| ||| ||||||||| ||||||||||||| ||||||||| | |||||||| |||||||||    
T  23906984 tccgtcttgcttctactcaagcggaatccatacgcttctaaggcttgcctccaggtctctagcctcccgttcacttccttcctcgactcacc 23907075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 209 - 400
Target Start/End: Original strand, 48174680 - 48174867
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatataaatac 308  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| || || |||||  ||||||||||||||||||    ||||    
T  48174680 tatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctccaaggtagacctacttctccttccgctgaagttacattccat----atac 48174775  T
Q  309 tccgtcttgcttcaactcaggtggaaatcatacacttataaggcttgtctccaggtctctaacctcccgtttaattccttccgcgactcacc 400  Q
    ||||||||||||| ||||| | |||| |||||| ||| ||||||||| ||||||||||||| ||||||||| | |||||  | |||||||||    
T  48174776 tccgtcttgcttctactcaagcggaattcatacgcttctaaggcttgcctccaggtctctagcctcccgttcacttcctctctcgactcacc 48174867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 209 - 400
Target Start/End: Complemental strand, 56374985 - 56374798
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatataaatac 308  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||| || || |||||  ||||||||||||||||||    ||||    
T  56374985 tatttaaaccgtgtaacttggggtatgatatgctctccaactttcacctccaaggtagacctacttctccttccgctgaagttacattccat----atac 56374890  T
Q  309 tccgtcttgcttcaactcaggtggaaatcatacacttataaggcttgtctccaggtctctaacctcccgtttaattccttccgcgactcacc 400  Q
    ||||||||||||| ||||| | ||||  ||||||||| ||||||||| ||||||||||||| ||||||||| | ||||| || |||||||||    
T  56374889 tccgtcttgcttctactcaagcggaatccatacacttctaaggcttgcctccaggtctctagcctcccgttcacttcctccctcgactcacc 56374798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 209 - 400
Target Start/End: Complemental strand, 435924 - 435737
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatataaatac 308  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| || || |||||  ||||||||||||||||||    ||||    
T  435924 tatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctccaaggtagacctacttctccttccgctgaagttacattccat----atac 435829  T
Q  309 tccgtcttgcttcaactcaggtggaaatcatacacttataaggcttgtctccaggtctctaacctcccgtttaattccttccgcgactcacc 400  Q
    |||||| |||||| ||||| | ||||  ||||| ||| ||||||||| ||||||||||||| ||||||||| | ||||| || |||||||||    
T  435828 tccgtcgtgcttctactcaagcggaatccatacgcttctaaggcttgcctccaggtctctagcctcccgttcacttcctccctcgactcacc 435737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 209 - 400
Target Start/End: Original strand, 31960401 - 31960588
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatataaatac 308  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||| || || |||||  ||||||||||||||||||    ||||    
T  31960401 tatttaaaccgtgtaaattggggtatgatatgatctccaactttcacctccaaggtagacctacttctccttccgctgaagttacattccat----atac 31960496  T
Q  309 tccgtcttgcttcaactcaggtggaaatcatacacttataaggcttgtctccaggtctctaacctcccgtttaattccttccgcgactcacc 400  Q
    || |||||||||| ||||| | ||||  ||||| ||| ||||||||| ||||||||||||| ||||||||||| ||||| || |||||||||    
T  31960497 tctgtcttgcttctactcaagcggaatccatacgcttctaaggcttgcctccaggtctctagcctcccgtttagttcctccctcgactcacc 31960588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 213 - 410
Target Start/End: Original strand, 27450764 - 27450957
Alignment:
Q  213 taaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatataaatactccg 312  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||||| ||| ||  | || |||||| ||||||||||||||||    ||||||||||    
T  27450764 taaactgtgtaacttggggtatgatatgatctccaactttcacctccaaggtatacccacttctccttttgctgaagttacattcc----aaatactccg 27450859  T
Q  313 tcttgcttcaactcaggtggaaatcatacacttataaggcttgtctccaggtctctaacctcccgtttaattccttccgcgactcaccaagcacgact 410  Q
    ||||||||| ||||| | ||||| ||||| ||| ||||||||| ||| ||||||||| |||||| ||| | |||| || |||||||||||||| ||||    
T  27450860 tcttgcttctactcaagcggaaaccatacgcttctaaggcttgcctcgaggtctctagcctcccatttgactcctccctcgactcaccaagcaagact 27450957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 209 - 400
Target Start/End: Original strand, 1777602 - 1777789
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatataaatac 308  Q
    |||||||| ||||||||||||||||| ||||||| |||||||||||||||||| |||||| || || |||||  ||||||||||||||||||    ||||    
T  1777602 tatttaaaacgtgtaacttggggtatgatatgatttccaactttcacctccaaggtagacctacttctccttccgctgaagttacattccat----atac 1777697  T
Q  309 tccgtcttgcttcaactcaggtggaaatcatacacttataaggcttgtctccaggtctctaacctcccgtttaattccttccgcgactcacc 400  Q
    ||||| ||||||| ||||| | ||||  ||||| ||| ||||| ||| ||||||||||||| ||||||||| | ||||| || |||||||||    
T  1777698 tccgtattgcttctactcaagcggaatccatacgcttctaaggtttgcctccaggtctctagcctcccgttcacttcctccctcgactcacc 1777789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 209 - 400
Target Start/End: Complemental strand, 53707489 - 53707302
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatataaatac 308  Q
    |||||| ||||||||||||||||||| ||||||||| |||||||||||||||| |||||| || || |||||   |||||||||||||| ||    ||||    
T  53707489 tatttagaccgtgtaacttggggtatgatatgatcttcaactttcacctccaaggtagacctacttctccttccactgaagttacattcgat----atac 53707394  T
Q  309 tccgtcttgcttcaactcaggtggaaatcatacacttataaggcttgtctccaggtctctaacctcccgtttaattccttccgcgactcacc 400  Q
    ||||||||||||| ||||| | ||||  ||||| ||| ||||||||| ||||||||||||| ||||||||| | ||||| || |||||||||    
T  53707393 tccgtcttgcttctactcaagcggaatccatacgcttctaaggcttgcctccaggtctctagcctcccgttcacttcctccctcgactcacc 53707302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 209 - 379
Target Start/End: Complemental strand, 39708152 - 39707986
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatataaatac 308  Q
    |||||||||||  ||||||| ||||| ||||||||||||| ||||||||||||  ||||| ||||| |||||| |||||||||| |||||||    ||||    
T  39708152 tatttaaaccgcataacttgaggtataatatgatctccaaatttcacctccaagatagacctaattctccttttgctgaagttatattccat----atac 39708057  T
Q  309 tccgtcttgcttcaactcaggtggaaatcatacacttataaggcttgtctccaggtctctaacctcccgtt 379  Q
    ||||||||||||| |||||||  |||| ||||| ||| ||||||||||| ||| ||||||| |||||||||    
T  39708056 tccgtcttgcttctactcaggcagaaaccatacgcttctaaggcttgtcaccatgtctctagcctcccgtt 39707986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 209 - 398
Target Start/End: Original strand, 48623114 - 48623299
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatataaatac 308  Q
    |||||||| ||||||| ||||||||| ||||| |||||||||||||||||||| |||||| || || |||||  ||||||||||||||||||    ||||    
T  48623114 tatttaaatcgtgtaatttggggtatgatatgctctccaactttcacctccaaggtagacctacttctccttccgctgaagttacattccat----atac 48623209  T
Q  309 tccgtcttgcttcaactcaggtggaaatcatacacttataaggcttgtctccaggtctctaacctcccgtttaattccttccgcgactca 398  Q
    ||||||||||||| ||||| | ||||  ||||| ||| ||||||||| |||||| ||| || ||||||||| | ||||| || |||||||    
T  48623210 tccgtcttgcttctactcaagcggaatccatacgcttctaaggcttgcctccagatctatagcctcccgttcacttcctccctcgactca 48623299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 209 - 303
Target Start/End: Complemental strand, 33226904 - 33226810
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatata 303  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| || || |||||  |||||||||||||||||||||    
T  33226904 tatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctccaaggtagacctacttgtccttccgctgaagttacattccatata 33226810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 211 - 410
Target Start/End: Complemental strand, 16002622 - 16002412
Alignment:
Q  211 tttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccata--------- 301  Q
    |||||||||||||| ||||||||| ||||||| ||||||||| |||||||| ||||||| | || |||||| ||| |||||| ||||||||             
T  16002622 tttaaaccgtgtaatttggggtatgatatgatttccaacttttacctccaaggtagactaacttctccttttgctaaagttatattccataaagttatat 16002523  T
Q  302 --taaatactccgtcttgcttcaactcaggtggaaatcatacacttataaggcttgtctccaggtctctaacctcccgtttaattccttccgcgactcac 399  Q
       | |||||  |||||||||| ||||| | | ||| ||||| ||| ||||||||||||| ||||||||| ||||||||| ||||||| || | ||||||    
T  16002522 tccatatactttgtcttgcttctactcaagcgcaaaccatacgcttctaaggcttgtctctaggtctctagcctcccgttcaattcctccctcaactcac 16002423  T
Q  400 caagcacgact 410  Q
    |||||| ||||    
T  16002422 caagcaagact 16002412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 209 - 303
Target Start/End: Original strand, 47265791 - 47265885
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatata 303  Q
    |||||||||  ||||||||||||||| |||||| ||||||||||||||||||| |||||| || || |||||| |||||||||||||| ||||||    
T  47265791 tatttaaactatgtaacttggggtatgatatgacctccaactttcacctccaaggtagacctacttctccttttgctgaagttacatttcatata 47265885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 210 - 258
Target Start/End: Complemental strand, 30807292 - 30807244
Alignment:
Q  210 atttaaaccgtgtaacttggggtattatatgatctccaactttcacctc 258  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  30807292 atttaaaccgtgtaacttgtggtatgatatgatctccaactttcacctc 30807244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 209 - 387
Target Start/End: Original strand, 10776006 - 10776180
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatataaatac 308  Q
    |||||||||| ||||||||| ||||| |||||||||||||||||| |||| ||| ||||   | ||  ||||| ||| || |||||||||||    |||     
T  10776006 tatttaaaccatgtaacttgtggtatgatatgatctccaactttcccctctaaactagaaacatttcgccttttgctaaaattacattccat----atag 10776101  T
Q  309 tccgtcttgcttcaactcaggtggaaatcatacacttataaggcttgtctccaggtctctaacctcccgtttaattcct 387  Q
    |  ||| ||||||  |||||| ||||  |||||| || ||||||||||||||| || ||  ||||||| ||||||||||    
T  10776102 tatgtcgtgcttctgctcaggcggaagccatacatttctaaggcttgtctccaagtgtcctacctcccatttaattcct 10776180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 209 - 250
Target Start/End: Complemental strand, 50286666 - 50286625
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaact 250  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  50286666 tatttaaaccgtgtaacttggggtatgatatgatctccaact 50286625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 209 - 267
Target Start/End: Original strand, 55768964 - 55769022
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtaga 267  Q
    |||||||||||||| ||||| ||||| | ||||||| ||||||||||||| || |||||    
T  55768964 tatttaaaccgtgttacttgtggtatgacatgatcttcaactttcacctctaaggtaga 55769022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 209 - 267
Target Start/End: Original strand, 55833220 - 55833278
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtaga 267  Q
    |||||||||||||| ||||| ||||| | ||||||| ||||||||||||| || |||||    
T  55833220 tatttaaaccgtgttacttgtggtatgacatgatcttcaactttcacctctaaggtaga 55833278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 94; Significance: 1e-45; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 209 - 375
Target Start/End: Complemental strand, 32630302 - 32630140
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatataaatac 308  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||  | || |||||| ||||||||||||||||||    ||||    
T  32630302 tatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctccaaggtagacccacttctccttttgctgaagttacattccat----atac 32630207  T
Q  309 tccgtcttgcttcaactcaggtggaaatcatacacttataaggcttgtctccaggtctctaacctcc 375  Q
    ||||||||||||| ||||||| ||||| ||||| ||| ||||||||| ||||||||||||| |||||    
T  32630206 tccgtcttgcttctactcaggcggaaaccatacgcttctaaggcttgcctccaggtctctagcctcc 32630140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 209 - 400
Target Start/End: Original strand, 33350393 - 33350580
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatataaatac 308  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| || || | |||  ||||||||||||||||||    ||||    
T  33350393 tatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctccaaggtagacctacttcttcttccgctgaagttacattccat----atac 33350488  T
Q  309 tccgtcttgcttcaactcaggtggaaatcatacacttataaggcttgtctccaggtctctaacctcccgtttaattccttccgcgactcacc 400  Q
    | ||||||||||| ||||| | ||||  ||||| ||| ||||||||| ||||||||||||| ||||||||| | ||||| || |||||||||    
T  33350489 ttcgtcttgcttctactcaagcggaatccatacgcttctaaggcttgcctccaggtctctagcctcccgttcacttcctccctcgactcacc 33350580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 209 - 400
Target Start/End: Complemental strand, 37616611 - 37616424
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatataaatac 308  Q
    |||||||| ||||||||||||||||| |||||||||||| ||||||||||||| |||||| || || |||||  ||||||||||||||||||    ||||    
T  37616611 tatttaaatcgtgtaacttggggtatgatatgatctccacctttcacctccaaggtagacctacttctccttctgctgaagttacattccat----atac 37616516  T
Q  309 tccgtcttgcttcaactcaggtggaaatcatacacttataaggcttgtctccaggtctctaacctcccgtttaattccttccgcgactcacc 400  Q
    ||||||||||||| ||||| | ||||  ||||| ||| ||||||||| ||||||||||||| ||||||||| | ||||| || |||||||||    
T  37616515 tccgtcttgcttctactcaagcggaatccatacgcttctaaggcttgcctccaggtctctagcctcccgttcacttcctccctcgactcacc 37616424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 209 - 400
Target Start/End: Original strand, 46356438 - 46356625
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatataaatac 308  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| || || |||||  ||||||||||||||||||    ||||    
T  46356438 tatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctccaaggtagacctacttctccttccgctgaagttacattccat----atac 46356533  T
Q  309 tccgtcttgcttcaactcaggtggaaatcatacacttataaggcttgtctccaggtctctaacctcccgtttaattccttccgcgactcacc 400  Q
    ||||||||||||| ||||| | || |  ||||| ||| ||||||||| ||||||||||||| | ||||||| | ||||| || |||||||||    
T  46356534 tccgtcttgcttctactcaagcggtatccatacgcttctaaggcttgcctccaggtctctagcttcccgttcacttcctccctcgactcacc 46356625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 209 - 400
Target Start/End: Complemental strand, 36651689 - 36651502
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatataaatac 308  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||||||||| |||||| || || | |||  ||||||||| ||||||||    ||||    
T  36651689 tatttaaaccgcgtaacttggggtatgatatgatctccaactttcacctccaaggtagacctacttcttcttccgctgaagttccattccat----atac 36651594  T
Q  309 tccgtcttgcttcaactcaggtggaaatcatacacttataaggcttgtctccaggtctctaacctcccgtttaattccttccgcgactcacc 400  Q
    ||||||||||||| ||||| | ||||  ||||| ||| ||||||||| ||||||||||||| ||||||||| | ||||| || |||||||||    
T  36651593 tccgtcttgcttctactcaagcggaatccatacgcttctaaggcttgcctccaggtctctagcctcccgttcacttcctccctcgactcacc 36651502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 209 - 400
Target Start/End: Complemental strand, 31004918 - 31004732
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatataaatac 308  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||| |||||| || || |||||  |||||||| |||||||||    ||||    
T  31004918 tatttaaac-gtgtaacttggggtatgatatgatctccaactttcacctccaaggtagacctacttctccttccgctgaagtaacattccat----atac 31004824  T
Q  309 tccgtcttgcttcaactcaggtggaaatcatacacttataaggcttgtctccaggtctctaacctcccgtttaattccttccgcgactcacc 400  Q
    || |||||||||| ||||| | ||||  ||||| ||| ||||||||| ||||||||||||| ||||||||| | ||||| || |||||||||    
T  31004823 tctgtcttgcttctactcaagcggaatccatacgcttctaaggcttgcctccaggtctctagcctcccgttcacttcctccctcgactcacc 31004732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 209 - 376
Target Start/End: Complemental strand, 49028962 - 49028799
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatataaatac 308  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||| || || |||||   |||||||||||||||||    ||||    
T  49028962 tatttaaaccgtgtaacttggggtatgatctgatctccaactttcacctccaaggtagacctacttctccttcccctgaagttacattccat----atac 49028867  T
Q  309 tccgtcttgcttcaactcaggtggaaatcatacacttataaggcttgtctccaggtctctaacctccc 376  Q
    ||||||||||||| ||||| | ||||  ||||| ||| ||||||||| ||||||||||||| ||||||    
T  49028866 tccgtcttgcttctactcaagcggaatccatacgcttctaaggcttgcctccaggtctctagcctccc 49028799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 209 - 410
Target Start/End: Original strand, 36869876 - 36870073
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatataaatac 308  Q
    ||||||||||| |||| ||||||||| ||||| |||||||||||||||||||  |||||| || ||| |||||  ||||||||||||||||||||    |    
T  36869876 tatttaaaccgcgtaatttggggtatgatatgctctccaactttcacctccagggtagacatactttcccttttcctgaagttacattccatata----c 36869971  T
Q  309 tccgtcttgcttcaactcaggtggaaatcatacacttataaggcttgtctccaggtctctaacctcccgtttaattccttccgcgactcaccaagcacga 408  Q
    |  |||||||||| ||||| | ||||| ||||| ||| ||| ||||| ||||||| ||||| ||||||||| ||||||| || |||||||||||||| ||    
T  36869972 tatgtcttgcttctactcaagcggaaaccatacgcttctaaagcttgcctccaggcctctagcctcccgttcaattcctccctcgactcaccaagcaaga 36870071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 209 - 400
Target Start/End: Original strand, 39906966 - 39907153
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatataaatac 308  Q
    ||||||||||||||||| |||| ||| |||||||||||||||||||||||||| |||||| || || |||||  ||||||||||||||||||    ||||    
T  39906966 tatttaaaccgtgtaacatgggatatgatatgatctccaactttcacctccaaggtagacctacttctccttccgctgaagttacattccat----atac 39907061  T
Q  309 tccgtcttgcttcaactcaggtggaaatcatacacttataaggcttgtctccaggtctctaacctcccgtttaattccttccgcgactcacc 400  Q
    ||||||||||||| ||||| | ||||  ||||  ||| ||||  ||| ||||||||||||| ||||||||| | ||||| || |||||||||    
T  39907062 tccgtcttgcttctactcaagcggaatccatatgcttctaagatttgcctccaggtctctagcctcccgttcacttcctccctcgactcacc 39907153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 209 - 374
Target Start/End: Complemental strand, 38606700 - 38606540
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatataaatac 308  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||| || ||||||  | || |||||| ||  || ||||||||||||||    |    
T  38606700 tatttaaaccgtgtaacttgggatatgatatgatctccaactttcacctc-aaggtagacccacttctccttttgcaaaaattacattccatata----c 38606606  T
Q  309 tccgtcttgcttcaactcaggtggaaatcatacacttataaggcttgtctccaggtctctaacctc 374  Q
    ||||||||||||| ||||||| ||||| ||||||||| ||||||||| ||||||||||||| ||||    
T  38606605 tccgtcttgcttctactcaggcggaaaccatacacttctaaggcttgcctccaggtctctagcctc 38606540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 209 - 400
Target Start/End: Complemental strand, 11593655 - 11593461
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttccttt-agctgaagttacattccatata--aa 305  Q
    |||||||||||| ||||||||||||| ||||||||| |||||||||||||||| |||||| || || ||||||  |||||||||||||| ||||||        
T  11593655 tatttaaaccgtctaacttggggtatgatatgatcttcaactttcacctccaaggtagacctacttctcctttccgctgaagttacatttcatatactcc 11593556  T
Q  306 tactccgtcttgcttcaactcaggtggaaatcatacacttataaggcttgtctccaggtctctaacctcccgtttaattccttccgcgactcacc 400  Q
      |||||||||||||| ||||| | ||||  ||||| ||| |||| |||| ||||||||||||| ||||||||| | ||||| || |||||||||    
T  11593555 gtctccgtcttgcttctactcaagcggaatccatacgcttctaagacttgcctccaggtctctagcctcccgttcacttcctccctcgactcacc 11593461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 209 - 410
Target Start/End: Original strand, 24177782 - 24177979
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatataaatac 308  Q
    |||||||||||||||| ||||||||| |||||||||||||| |||| || |||  ||||| || || | |||| |||||||||||||||||||||    |    
T  24177782 tatttaaaccgtgtaaattggggtatgatatgatctccaaccttcatctacaagctagacctacttcttcttttgctgaagttacattccatata----c 24177877  T
Q  309 tccgtcttgcttcaactcaggtggaaatcatacacttataaggcttgtctccaggtctctaacctcccgtttaattccttccgcgactcaccaagcacga 408  Q
    ||| ||||| | | ||||| |  |||| |||||  || ||||||||| |||||||||||||  ||||||||||| |||| || |||||||||||||| ||    
T  24177878 tccatcttgatgctactcatgcagaaaccatacgtttctaaggcttgcctccaggtctctagtctcccgtttaaatcctccctcgactcaccaagcaaga 24177977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 209 - 321
Target Start/End: Complemental strand, 48919083 - 48918975
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatataaatac 308  Q
    |||||||||||||||||||||||| | ||||||||||| ||||| |||| ||| |||||| || || ||| || |||||||| |||||||||    ||||    
T  48919083 tatttaaaccgtgtaacttggggtgtaatatgatctcctacttttaccttcaatgtagacctacttctccatttgctgaagtcacattccat----atac 48918988  T
Q  309 tccgtcttgcttc 321  Q
    |||||||||||||    
T  48918987 tccgtcttgcttc 48918975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 93; Significance: 4e-45; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 209 - 410
Target Start/End: Original strand, 41763636 - 41763833
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatataaatac 308  Q
    |||||||| |||| |||||||||||| |||| ||||||||||||||||||||| ||||||  | || |||||| ||||||||||||||||||    ||||    
T  41763636 tatttaaatcgtgcaacttggggtatgatataatctccaactttcacctccaaggtagacccacttctccttttgctgaagttacattccat----atac 41763731  T
Q  309 tccgtcttgcttcaactcaggtggaaatcatacacttataaggcttgtctccaggtctctaacctcccgtttaattccttccgcgactcaccaagcacga 408  Q
    ||||||||||||| ||||||| ||||| ||||| ||  ||||||||| ||||||||||||| |||||| ||||| |||| || |||||||||||||| ||    
T  41763732 tccgtcttgcttctactcaggcggaaaccatacgctactaaggcttgcctccaggtctctagcctcccatttaactcctccctcgactcaccaagcaaga 41763831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 209 - 400
Target Start/End: Complemental strand, 2610223 - 2610036
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatataaatac 308  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| || || |||||  |||||||||||||| |||    ||||    
T  2610223 tatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctccaaggtagacctacttctccttctgctgaagttacatttcat----atac 2610128  T
Q  309 tccgtcttgcttcaactcaggtggaaatcatacacttataaggcttgtctccaggtctctaacctcccgtttaattccttccgcgactcacc 400  Q
    ||||||||||||| ||||| | ||||  ||||| ||| ||||||||| |||||||| |||| ||||||||| | ||||| || |||||||||    
T  2610127 tccgtcttgcttctactcaagcggaatccatacgcttctaaggcttgcctccaggtttctagcctcccgttcacttcctccctcgactcacc 2610036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 209 - 410
Target Start/End: Original strand, 24584193 - 24584390
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatataaatac 308  Q
    |||||||||||||||||||| ||| | |||||||||||||||||||||||||| |||||| ||||| |||||| ||||||||||||||||||    ||||    
T  24584193 tatttaaaccgtgtaacttgcggtctgatatgatctccaactttcacctccaaggtagacataattctccttttgctgaagttacattccat----atac 24584288  T
Q  309 tccgtcttgcttcaactcaggtggaaatcatacacttataaggcttgtctccaggtctctaacctcccgtttaattccttccgcgactcaccaagcacga 408  Q
    ||||||||| ||| ||||| | ||||||||||| ||| |||| || | ||   |||||||| ||||||||| ||||||| ||  ||||||||||||| ||    
T  24584289 tccgtcttgtttctactcaagcggaaatcatacgcttctaagactggcctttgggtctctagcctcccgttcaattcctcccttgactcaccaagcaaga 24584388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 209 - 410
Target Start/End: Original strand, 45368211 - 45368409
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaa--ttttcctttagctgaagttacattccatataaat 306  Q
    |||||||||||||||| ||||| ||| |||||||||||||||||||||||||| ||||||  |   || |||||| | |||||||||||||||||||       
T  45368211 tatttaaaccgtgtaatttggg-tatgatatgatctccaactttcacctccaaggtagacccacacttctccttttgttgaagttacattccatata--- 45368306  T
Q  307 actccgtcttgcttcaactcaggtggaaatcatacacttataaggcttgtctccaggtctctaacctcccgtttaattccttccgcgactcaccaagcac 406  Q
     | |||||||||||| ||||||| | ||| ||||| ||| ||||||||| ||||||||||||| |||||| ||||| |||| || ||||||||||||||     
T  45368307 -ccccgtcttgcttctactcaggcgaaaaccatacgcttctaaggcttgcctccaggtctctagcctcccatttaactcctccctcgactcaccaagcaa 45368405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 209 - 400
Target Start/End: Original strand, 452209 - 452390
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatataaatac 308  Q
    |||||||||||||||||||||||||| ||||||||||||||      |||||| |||||| || || |||||  |||||||||||||||||||||    |    
T  452209 tatttaaaccgtgtaacttggggtatgatatgatctccaac------ctccaaggtagacctacttctccttccgctgaagttacattccatata----c 452298  T
Q  309 tccgtcttgcttcaactcaggtggaaatcatacacttataaggcttgtctccaggtctctaacctcccgtttaattccttccgcgactcacc 400  Q
    ||||||||||||| ||||| ||||||  ||||| ||| ||||||||| ||||||||||||| ||||||||| | ||||| || | |||||||    
T  452299 tccgtcttgcttctactcaagtggaatccatacgcttctaaggcttgcctccaggtctctagcctcccgttcacttcctccctcaactcacc 452390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 209 - 369
Target Start/End: Complemental strand, 4807287 - 4807131
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatataaatac 308  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||| |||||| || || |||||   |||||||||||||||||    ||||    
T  4807287 tatttaaactgtgtaacttggggtatgatatgatctccaactttcacctccaaggtagacctacttctccttccactgaagttacattccat----atac 4807192  T
Q  309 tccgtcttgcttcaactcaggtggaaatcatacacttataaggcttgtctccaggtctcta 369  Q
    ||||||||||||| ||||| | ||||  ||||| ||| ||||||||| ||||| |||||||    
T  4807191 tccgtcttgcttctactcaagcggaatccatacgcttctaaggcttgcctccaagtctcta 4807131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 209 - 405
Target Start/End: Complemental strand, 30743318 - 30743126
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatataaatac 308  Q
    |||||||||||||||||||||| |||  ||||||||||||||||||||||||| ||||||  | || |||||| ||||||||||||||||||    ||||    
T  30743318 tatttaaaccgtgtaacttgggatatggtatgatctccaactttcacctccaaggtagaccaatttctccttttgctgaagttacattccat----atac 30743223  T
Q  309 tccgtcttgcttcaactcaggtggaaatcatacacttataaggcttgtctccaggtctctaacctcccgtttaattccttccgcgactcaccaagca 405  Q
    || ||||| |||| || |||| ||||| ||||  ||| ||||| ||||||||| ||||||| |  || ||| ||||||| || ||||||||||||||    
T  30743222 tctgtctttcttctacccaggcggaaaccatatgcttctaaggtttgtctccaagtctctagcgaccagttcaattcctccctcgactcaccaagca 30743126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 236 - 400
Target Start/End: Original strand, 12475035 - 12475195
Alignment:
Q  236 atatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatataaatactccgtcttgcttcaactcaggtggaaa 335  Q
    ||||||||||||||||||||||| || |||||| || || |||||  ||||||||||||||||||    ||||||||||||||||  ||||| | ||||     
T  12475035 atatgatctccaactttcacctctaaggtagacctacttctccttccgctgaagttacattccat----atactccgtcttgcttatactcaagaggaat 12475130  T
Q  336 tcatacacttataaggcttgtctccaggtctctaacctcccgtttaattccttccgcgactcacc 400  Q
     ||||| ||| ||||||||| ||||||||||||| ||||||||| | ||||| || |||||||||    
T  12475131 ccatacgcttctaaggcttgcctccaggtctctagcctcccgttcacttcctccctcgactcacc 12475195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 209 - 400
Target Start/End: Original strand, 38453207 - 38453392
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatataaatac 308  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||| || || |||||  ||||| ||||||||||||    ||||    
T  38453207 tatttaaatcgtgtaacttggggtatgatatgatctccaactttcacctccaaggtagac-tacttctccttccgctgatgttacattccat----atac 38453301  T
Q  309 tccgtcttgcttcaactcaggtggaaatcatacacttataaggcttgtctccaggtctctaacctcccgtttaattccttccgcgactcacc 400  Q
    ||||||||||||| ||| | | ||||  ||||| ||| || || ||| ||||| ||||||| ||||||||| | ||||| || |||||||||    
T  38453302 tccgtcttgcttctacttaagcggaatccatacgcttctatggtttgcctcca-gtctctagcctcccgttcacttcctccctcgactcacc 38453392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 209 - 341
Target Start/End: Original strand, 11992693 - 11992821
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatataaatac 308  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||||  | || || |||  |||||||||||||||||    ||||    
T  11992693 tatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctctaaggtagacccacttctctttttactgaagttacattccat----atac 11992788  T
Q  309 tccgtcttgcttcaactcaggtggaaatcatac 341  Q
    | ||||||||||| ||||||| ||||| |||||    
T  11992789 ttcgtcttgcttctactcaggcggaaaccatac 11992821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 209 - 334
Target Start/End: Complemental strand, 8180475 - 8180354
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatataaatac 308  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||||| |||||| || || |||||   ||||| |||||||||||    ||||    
T  8180475 tatttaaaccgtgtaacttggagtatgatatgatctccaactttcacctccaaggtagacctacttctccttccactgaaattacattccat----atac 8180380  T
Q  309 tccgtcttgcttcaactcaggtggaa 334  Q
    || |||||||||| ||||| ||||||    
T  8180379 tctgtcttgcttctactcaagtggaa 8180354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 209 - 304
Target Start/End: Complemental strand, 13149008 - 13148913
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatataa 304  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||  |  || || |||||| ||||||||||||  ||||||||    
T  13149008 tatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctccaaggttaaactatttctccttttgctgaagttacaccccatataa 13148913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 209 - 303
Target Start/End: Complemental strand, 3865767 - 3865673
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatata 303  Q
    |||| ||||||||||||||||| ||  |||||||||||||||||||||||||| |||||| || || |||||  |||||||||||||| ||||||    
T  3865767 tattgaaaccgtgtaacttgggatacaatatgatctccaactttcacctccaaggtagacgtacttctccttccgctgaagttacatttcatata 3865673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 209 - 267
Target Start/End: Complemental strand, 37281804 - 37281746
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtaga 267  Q
    ||||||||  |||||||||||||||| | |||||||| ||||||||||||||| |||||    
T  37281804 tatttaaaatgtgtaacttggggtatgacatgatctcaaactttcacctccaaggtaga 37281746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 209 - 258
Target Start/End: Complemental strand, 876827 - 876778
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctc 258  Q
    ||||||||| |||||||||| ||||  |||||||||||||||||||||||    
T  876827 tatttaaactgtgtaacttgtggtaggatatgatctccaactttcacctc 876778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 268
Target Start/End: Original strand, 3244238 - 3244292
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagac 268  Q
    ||||||||||||||||||||||     ||||||||| |||||||||||||||| ||||||    
T  3244238 tatttaaaccgtgtaacttggg-----atatgatcttcaactttcacctccaaggtagac 3244292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 92; Significance: 2e-44; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 209 - 405
Target Start/End: Original strand, 10100444 - 10100636
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatataaatac 308  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| || || || ||| ||| ||||||||||||||    ||||    
T  10100444 tatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctccaaggtagacctacttctcattttgctaaagttacattccat----atac 10100539  T
Q  309 tccgtcttgcttcaactcaggtggaaatcatacacttataaggcttgtctccaggtctctaacctcccgtttaattccttccgcgactcaccaagca 405  Q
    ||||||||||||| ||||||| ||||| ||||  ||| |||||||   |||| |||||||| ||||| |||||||||||||| |||||||| |||||    
T  10100540 tccgtcttgcttctactcaggcggaaaccatatgcttctaaggctcacctcctggtctctagcctccagtttaattccttcctcgactcactaagca 10100636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 209 - 411
Target Start/End: Original strand, 5258737 - 5258935
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatataaatac 308  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||| ||||| ||||||  | || |||||| |||||||||||||||||||||    |    
T  5258737 tatttaaactgtgtaacttggggtatgatatgatctccaactttcacttccaaggtagacccacttctccttttgctgaagttacattccatata----c 5258832  T
Q  309 tccgtcttgcttcaactcaggtggaaatcatacacttataaggcttgtctccaggtctctaacctcccgtttaattccttccgcgactcaccaagcacga 408  Q
    |  |||||||||| ||||||| ||||  ||||| ||| ||||||||| ||||||||||||| |||||| ||||| |||| || |||||||||||||| ||    
T  5258833 tttgtcttgcttctactcaggcggaagccatacgcttctaaggcttgcctccaggtctctagcctcccatttaactcctccctcgactcaccaagcaaga 5258932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 209 - 410
Target Start/End: Complemental strand, 9706471 - 9706274
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatataaatac 308  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||||| ||| ||  | || |||||| ||||||||||||||||||    ||||    
T  9706471 tatttaaaccgtgtaacttggggtatgatatgatctccaactttcatctccaaggtatacccacttctccttttgctgaagttacattccat----atac 9706376  T
Q  309 tccgtcttgcttcaactcaggtggaaatcatacacttataaggcttgtctccaggtctctaacctcccgtttaattccttccgcgactcaccaagcacga 408  Q
    ||| ||||||||| ||||||| || || ||||| ||| ||||||||| ||||||||||||| |||||| ||||| | || || |||||||||||||| ||    
T  9706375 tccatcttgcttctactcaggcgggaaccatactcttctaaggcttgcctccaggtctctagcctcccatttaacttctccctcgactcaccaagcaaga 9706276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 209 - 403
Target Start/End: Complemental strand, 5631512 - 5631322
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatataaatac 308  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||| ||| ||||||  | || |||||| |||||||||||||||||||||    |    
T  5631512 tatttaaaccgtgtaacttggggtatgatatgatctctaactttcacctgcaaggtagacccacttctccttttgctgaagttacattccatata----c 5631417  T
Q  309 tccgtcttgcttcaactcaggtggaaatcatacacttataaggcttgtctccaggtctctaacctcccgtttaattccttccgcgactcaccaag 403  Q
    |  |||||||||| ||||| | ||||| ||||| ||| ||||||||| || |||||||| | |||||| ||||| |||| || ||||||||||||    
T  5631416 tttgtcttgcttctactcatgcggaaaccatactcttctaaggcttgcctacaggtctccagcctcccatttaactcctccctcgactcaccaag 5631322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 209 - 410
Target Start/End: Original strand, 20428223 - 20428421
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatataaatac 308  Q
    ||||||||||| |||||||| ||||| |||||||||||||||||||||||| | |||||| ||||| |||||| ||||||||||||||||||    ||||    
T  20428223 tatttaaaccgcgtaacttgtggtatgatatgatctccaactttcacctcctaggtagacctaattctccttttgctgaagttacattccat----atac 20428318  T
Q  309 tccgtcttgcttcaactca-ggtggaaatcatacacttataaggcttgtctccaggtctctaacctcccgtttaattccttccgcgactcaccaagcacg 407  Q
    ||||||||||||| ||||| || | ||| ||||| ||| ||||||||| ||| || | |||| |||||| ||||| |||| ||  ||||||||||||| |    
T  20428319 tccgtcttgcttccactcatggcgaaaaccatacgcttctaaggcttgcctctagatatctagcctcccatttaactcctcccttgactcaccaagcaag 20428418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 236 - 410
Target Start/End: Complemental strand, 30670556 - 30670386
Alignment:
Q  236 atatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatataaatactccgtcttgcttcaactcaggtggaaa 335  Q
    |||||||||||||||||||||||||| ||| || || || |||||| ||| ||| ||||||| |||||    ||||||||||||||  |||| | | |||    
T  30670556 atatgatctccaactttcacctccaaggtatacctacttctccttttgctaaagatacattctatata----ctccgtcttgcttcttctcaagcgaaaa 30670461  T
Q  336 tcatacacttataaggcttgtctccaggtctctaacctcccgtttaattccttccgcgactcaccaagcacgact 410  Q
     ||||| ||||||||||||| ||| ||||||||||||||||||| ||||||| || |||||||||||||| ||||    
T  30670460 ccatacgcttataaggcttgcctctaggtctctaacctcccgttcaattcctccctcgactcaccaagcaagact 30670386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 229 - 410
Target Start/End: Complemental strand, 33495882 - 33495705
Alignment:
Q  229 gggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatataaatactccgtcttgcttcaactcag 328  Q
    |||||| ||||||||| |||||||||||||||| |||||| || || |||||| | ||||||||||||||||    |||||| |||||||||| ||||||    
T  33495882 gggtatgatatgatcttcaactttcacctccaaggtagacctacttctccttttgatgaagttacattccat----atactctgtcttgcttctactcag 33495787  T
Q  329 gtggaaatcatacacttataaggcttgtctccaggtctctaacctcccgtttaattccttccgcgactcaccaagcacgact 410  Q
    | ||||| ||||| ||| ||||| ||| ||||| ||||||| ||||| ||| ||||||| || | |||||||||||| ||||    
T  33495786 gcggaaaccatacgcttttaaggtttgactccaagtctctagcctcctgttcaattcctccctcaactcaccaagcaagact 33495705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 305 - 410
Target Start/End: Original strand, 2680729 - 2680834
Alignment:
Q  305 atactccgtcttgcttcaactcaggtggaaatcatacacttataaggcttgtctccaggtctctaacctcccgtttaattccttccgcgactcaccaagc 404  Q
    |||||| |||||||||| || ||| || ||||||||| ||| ||||||||||||||| ||||||| | ||||||| | |||||  | ||||||| |||||    
T  2680729 atactctgtcttgcttctacgcagatgaaaatcatacgcttctaaggcttgtctccaagtctctagcatcccgttcagttcctcactcgactcatcaagc 2680828  T
Q  405 acgact 410  Q
    | ||||    
T  2680829 aagact 2680834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 209 - 267
Target Start/End: Complemental strand, 3632711 - 3632653
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtaga 267  Q
    |||||||| ||||||| || |||||| ||||||||||||||||||||||| || |||||    
T  3632711 tatttaaatcgtgtaatttagggtatgatatgatctccaactttcacctcaaaggtaga 3632653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 209 - 387
Target Start/End: Complemental strand, 27790851 - 27790677
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatataaatac 308  Q
    |||||||||| ||||| |||| ||||| ||||| |||| || ||||||||||  |||||  || || |||||| | |||||||||| ||||||||    |    
T  27790851 tatttaaaccatgtaatttggagtattttatgacctcccaccttcacctccatggtagaactacttatccttttgttgaagttacactccatata----c 27790756  T
Q  309 tccgtcttgcttcaactcaggtggaaatcatacacttataaggcttgtctccaggtctctaacctcccgtttaattcct 387  Q
     | |||||||||| || |||| | || | ||||||||  ||||||||| || | || ||||||||||| || |||||||    
T  27790755 cctgtcttgcttctacccaggcgaaagttatacacttcaaaggcttgtatcaaagtatctaacctcccattcaattcct 27790677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 209 - 247
Target Start/End: Complemental strand, 2689351 - 2689313
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctcca 247  Q
    ||||||||||||||||||| |||||| ||||||||||||    
T  2689351 tatttaaaccgtgtaacttagggtatgatatgatctcca 2689313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 92; Significance: 2e-44; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 209 - 405
Target Start/End: Original strand, 32083332 - 32083524
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatataaatac 308  Q
    ||||||||  ||| |||||||||||| |||||||||||||||||||||||||| ||||||  | || |||||| ||||||||||||||||||    ||||    
T  32083332 tatttaaattgtgcaacttggggtatgatatgatctccaactttcacctccaaggtagacccacttctccttttgctgaagttacattccat----atac 32083427  T
Q  309 tccgtcttgcttcaactcaggtggaaatcatacacttataaggcttgtctccaggtctctaacctcccgtttaattccttccgcgactcaccaagca 405  Q
    ||||||||||||| ||||||| ||||| ||||| ||| | ||||||| ||||||||||||| |||||| ||||| |||| || ||||||||||||||    
T  32083428 tccgtcttgcttctactcaggcggaaaccatacgcttctgaggcttgcctccaggtctctagcctcccatttaactcctccctcgactcaccaagca 32083524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 209 - 400
Target Start/End: Original strand, 43240968 - 43241155
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatataaatac 308  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||  || || |||||  ||||||||||||||||||    ||||    
T  43240968 tatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctccaaggtagatctacttctccttccgctgaagttacattccat----atac 43241063  T
Q  309 tccgtcttgcttcaactcaggtggaaatcatacacttataaggcttgtctccaggtctctaacctcccgtttaattccttccgcgactcacc 400  Q
    ||||||||||||| ||||| ||||||  ||||| ||| ||||||||  ||||||||||||| ||||||||| | ||||| || |||||||||    
T  43241064 tccgtcttgcttctactcaagtggaatccatacgcttctaaggcttacctccaggtctctagcctcccgttcacttcctccctcgactcacc 43241155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 209 - 400
Target Start/End: Complemental strand, 51601753 - 51601566
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatataaatac 308  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| || || |||||  ||||||||||||||||||    ||||    
T  51601753 tatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctccaaggtagacctacttctccttccgctgaagttacattccat----atac 51601658  T
Q  309 tccgtcttgcttcaactcaggtggaaatcatacacttataaggcttgtctccaggtctctaacctcccgtttaattccttccgcgactcacc 400  Q
    ||||||||||||  ||||| | ||||  ||||| ||| ||||||||| ||||||||||||| ||||||||| | ||||| || |||||||||    
T  51601657 tccgtcttgcttttactcaagcggaatccatacgcttctaaggcttgcctccaggtctctagcctcccgttcacttcctccctcgactcacc 51601566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 209 - 400
Target Start/End: Complemental strand, 8671615 - 8671428
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatataaatac 308  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||| || || |||||  ||||||||||||||||||    ||||    
T  8671615 tatttaaaccgtgtaacttagggtatgatatgatctccaactttcacctccaaggtagacctacttctccttctgctgaagttacattccat----atac 8671520  T
Q  309 tccgtcttgcttcaactcaggtggaaatcatacacttataaggcttgtctccaggtctctaacctcccgtttaattccttccgcgactcacc 400  Q
    ||||||||||||| ||||| | ||||  ||||| ||| ||||||||| ||||| ||||||| ||||||||| | ||||| || |||||||||    
T  8671519 tccgtcttgcttctactcaagcggaatccatacgcttctaaggcttgcctccaagtctctagcctcccgttcacttcctccctcgactcacc 8671428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 209 - 400
Target Start/End: Original strand, 51441351 - 51441538
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatataaatac 308  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||| ||| |||||| || || |||||  ||||||||||||||||||    ||||    
T  51441351 tatttaaactgtgtaacttggggtatgatatgatctccaactttcaccttcaaggtagacctacttctccttccgctgaagttacattccat----atac 51441446  T
Q  309 tccgtcttgcttcaactcaggtggaaatcatacacttataaggcttgtctccaggtctctaacctcccgtttaattccttccgcgactcacc 400  Q
    ||||||||||||| ||||| | ||||  ||||| ||| ||||||||| ||||||||||||| ||||||||| | ||||| || |||||||||    
T  51441447 tccgtcttgcttctactcaagcggaatccatactcttctaaggcttgcctccaggtctctagcctcccgttcacttcctccctcgactcacc 51441538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 209 - 400
Target Start/End: Original strand, 49347980 - 49348168
Alignment:
Q  209 tatttaaacc-gtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatataaata 307  Q
    |||||||||| |||||||||||||||| |||||||||||||||||||||||||| |||||| || || |||||  ||||||||||||||| ||    |||    
T  49347980 tatttaaaccagtgtaacttggggtatgatatgatctccaactttcacctccaaggtagacctacttctccttccgctgaagttacattcgat----ata 49348075  T
Q  308 ctccgtcttgcttcaactcaggtggaaatcatacacttataaggcttgtctccaggtctctaacctcccgtttaattccttccgcgactcacc 400  Q
    |||||||||||||| ||||| |  |||  ||||| ||| ||||||||| ||||||||||||| ||||||||| | ||||| || |||||||||    
T  49348076 ctccgtcttgcttctactcaagcagaatccatacgcttctaaggcttgcctccaggtctctagcctcccgttcacttcctccctcgactcacc 49348168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 1210440 - 1210326
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatataaatac 308  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||| |||||| || || |||||  ||||||||||||||||||    ||||    
T  1210440 tatttaaactgtgtaacttggggtatgatatgatctccaactttcacctccaaggtagacctacttctccttccgctgaagttacattccat----atac 1210345  T
Q  309 tccgtcttgcttcaactca 327  Q
    ||||||||||||| |||||    
T  1210344 tccgtcttgcttctactca 1210326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 305 - 410
Target Start/End: Complemental strand, 7814097 - 7813993
Alignment:
Q  305 atactccgtcttgcttcaactcaggtggaaatcatacacttataaggcttgtctccaggtctctaacctcccgtttaattccttccgcgactcaccaagc 404  Q
    |||||| |||||||||| ||||| | ||||  ||||||||||||||||||||||||| ||||| |||||||| || ||||||| || |||||| | ||||    
T  7814097 atactctgtcttgcttctactcaagcggaagccatacacttataaggcttgtctccaagtctc-aacctcccattcaattcctccctcgactctcgaagc 7813999  T
Q  405 acgact 410  Q
    | ||||    
T  7813998 atgact 7813993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 209 - 376
Target Start/End: Original strand, 37463452 - 37463612
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatataaatac 308  Q
    ||||||||| |||||||| || |||| |||||||||||||||||||||||||| |||||   | |    |||| ||||||||||||||||||    ||||    
T  37463452 tatttaaactgtgtaactcggagtatgatatgatctccaactttcacctccaaggtaga---actccggcttttgctgaagttacattccat----atac 37463544  T
Q  309 tccgtcttgcttcaactcaggtggaaatcatacacttataaggcttgtctccaggtctctaacctccc 376  Q
    || |||||| ||| ||  | |  |||  ||||||||| ||||||||||||| | ||||||||||||||    
T  37463545 tctgtcttgtttctacaaaagcagaagccatacacttctaaggcttgtctcaaagtctctaacctccc 37463612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 212 - 303
Target Start/End: Complemental strand, 27445590 - 27445499
Alignment:
Q  212 ttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatata 303  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||| ||| ||| |  || || | ||||  || |||||||||||||||||    
T  27445590 ttaaaccgtgtaacttggggtatgataagatctccaactttcacctgcaaggtaaagctacttcttctttgactaaagttacattccatata 27445499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 209 - 257
Target Start/End: Complemental strand, 40419376 - 40419328
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacct 257  Q
    ||||||||| |||||||||| ||||| ||||||||||||||||||||||    
T  40419376 tatttaaactgtgtaacttgtggtatgatatgatctccaactttcacct 40419328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 209 - 301
Target Start/End: Original strand, 46226899 - 46226991
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccata 301  Q
    ||||||||||||||||||   |||||  ||||||||||||||| ||||||||||||||   || | | ||||| |||||||||||||| ||||    
T  46226899 tatttaaaccgtgtaactcaaggtatggtatgatctccaacttgcacctccaaagtagtactactctgccttttgctgaagttacatttcata 46226991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 209 - 260
Target Start/End: Original strand, 34827689 - 34827740
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctcca 260  Q
    |||||||||| |||||||| |||||| ||||||||||| |||||||||||||    
T  34827689 tatttaaaccttgtaacttagggtatgatatgatctcccactttcacctcca 34827740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 209 - 258
Target Start/End: Complemental strand, 6640821 - 6640772
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctc 258  Q
    |||||||||||||||||||| ||| | |||||||||| ||||||||||||    
T  6640821 tatttaaaccgtgtaacttgtggtgtaatatgatctctaactttcacctc 6640772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 209 - 250
Target Start/End: Complemental strand, 19936216 - 19936175
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaact 250  Q
    |||||||||| ||||||||||||||| |||||||||||||||    
T  19936216 tatttaaaccatgtaacttggggtatgatatgatctccaact 19936175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 209 - 258
Target Start/End: Complemental strand, 28528276 - 28528227
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctc 258  Q
    ||||||||| |||||||||| |||||  ||||||||||||||||||||||    
T  28528276 tatttaaactgtgtaacttgtggtatgctatgatctccaactttcacctc 28528227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 258
Target Start/End: Original strand, 32405083 - 32405120
Alignment:
Q  221 gtaacttggggtattatatgatctccaactttcacctc 258  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  32405083 gtaacttggggtatgatatgatctccaactttaacctc 32405120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 257
Target Start/End: Complemental strand, 7921618 - 7921574
Alignment:
Q  213 taaaccgtgtaacttggggtattatatgatctccaactttcacct 257  Q
    |||| ||||||||||| ||||  ||||||||||||||||||||||    
T  7921618 taaatcgtgtaacttgtggtaagatatgatctccaactttcacct 7921574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 89; Significance: 9e-43; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 211 - 400
Target Start/End: Complemental strand, 31161 - 30976
Alignment:
Q  211 tttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatataaatactc 310  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||| || || |||||  ||||||||||||||||||    ||||||    
T  31161 tttaaaccgtgtaacttggggtatgatatgatctccaactttcacttccaaggtagacctacttctccttccgctgaagttacattccat----atactc 31066  T
Q  311 cgtcttgcttcaactcaggtggaaatcatacacttataaggcttgtctccaggtctctaacctcccgtttaattccttccgcgactcacc 400  Q
     |||||||||| ||||| | ||||  ||||||||| ||||||||| ||||||||||||| ||||||||| | ||||| || |||||||||    
T  31065 agtcttgcttctactcaagcggaatccatacacttctaaggcttgcctccaggtctctagcctcccgttcacttcctccctcgactcacc 30976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 89; Significance: 9e-43; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 209 - 410
Target Start/End: Complemental strand, 25191074 - 25190877
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatataaatac 308  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||  | || |||||| ||||||||||||||||||    ||||    
T  25191074 tatttaaaccgtgtaacttgggctatgatatgatctccaactttcacctccaaggtagacccacttctccttttgctgaagttacattccat----atac 25190979  T
Q  309 tccgtcttgcttcaactcaggtggaaatcatacacttataaggcttgtctccaggtctctaacctcccgtttaattccttccgcgactcaccaagcacga 408  Q
    ||||||||||||| ||| |   |||||||| |||||| |||||| || ||| ||||||||| |||||| ||||| |||| || |||||||||||||| ||    
T  25190978 tccgtcttgcttctacttaatcggaaatcacacacttctaaggcgtgcctctaggtctctagcctcccatttaactcctccctcgactcaccaagcaaga 25190879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 209 - 400
Target Start/End: Original strand, 47542298 - 47542485
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatataaatac 308  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||| || || |||||  ||||||||||||||||||    | ||    
T  47542298 tatttaaaccgtgtaacttggggtatgaaatgatctccaactttcacctccaaggtagacctacttctccttctgctgaagttacattccat----acac 47542393  T
Q  309 tccgtcttgcttcaactcaggtggaaatcatacacttataaggcttgtctccaggtctctaacctcccgtttaattccttccgcgactcacc 400  Q
    ||||||||||||| ||||| | ||||  ||||| ||| ||||||||| ||||||||||||| ||||||||| | ||||| || |||||||||    
T  47542394 tccgtcttgcttctactcaagcggaatccatacgcttctaaggcttgcctccaggtctctagcctcccgttcacttcctccctcgactcacc 47542485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 209 - 379
Target Start/End: Complemental strand, 52138523 - 52138357
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatataaatac 308  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| || || |||||  ||||||||||||||||||    ||||    
T  52138523 tatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctccaaggtagacctacttctccttccgctgaagttacattccat----atac 52138428  T
Q  309 tccgtcttgcttcaactcaggtggaaatcatacacttataaggcttgtctccaggtctctaacctcccgtt 379  Q
    ||||||||||||| |||||    |||  ||||| ||| ||||||||| ||||||||||||| |||||||||    
T  52138427 tccgtcttgcttctactcaaacagaatccatacgcttctaaggcttgcctccaggtctctagcctcccgtt 52138357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 209 - 400
Target Start/End: Original strand, 51448296 - 51448483
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatataaatac 308  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| || || |||||  |||||||||||||| |||    ||||    
T  51448296 tatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctccaaggtagacctacttctccttccgctgaagttacatttcat----atac 51448391  T
Q  309 tccgtcttgcttcaactcaggtggaaatcatacacttataaggcttgtctccaggtctctaacctcccgtttaattccttccgcgactcacc 400  Q
    ||||||||||||| ||||| | ||||  ||||| ||| |||| |||| ||| ||||||||| | ||||||| | ||||| || | |||||||    
T  51448392 tccgtcttgcttctactcaagcggaatccatacgcttctaagacttgcctctaggtctctagcgtcccgttcacttcctccctcaactcacc 51448483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 209 - 410
Target Start/End: Complemental strand, 19736861 - 19736664
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatataaatac 308  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||||   || | | ||||| ||||||||||||||||||    ||||    
T  19736861 tatttaaaccatgtaacttggggtatgatatgatctccaactttcacctccaaggtaggactactctgccttttgctgaagttacattccat----atac 19736766  T
Q  309 tccgtcttgcttcaactcaggtggaaatcatacacttataaggcttgtctccaggtctctaacctcccgtttaattccttccgcgactcaccaagcacga 408  Q
    || |||||||||| ||| ||| |||   ||||||||| ||||||||||||| | |||||||| ||||| || ||||||| || | |||| ||||||| ||    
T  19736765 tctgtcttgcttctactaaggcggatgccatacacttctaaggcttgtctctaagtctctaatctcccattcaattcctccctcaactctccaagcagga 19736666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 209 - 410
Target Start/End: Complemental strand, 38849789 - 38849592
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatataaatac 308  Q
    |||||||||||||||| ||| ||||| |||||||||||||||||||||||||| |||||| || || |||||| | || |||||||||||||    ||||    
T  38849789 tatttaaaccgtgtaaattgaggtatgatatgatctccaactttcacctccaaggtagacctacttctccttttgatgtagttacattccat----atac 38849694  T
Q  309 tccgtcttgcttcaactcaggtggaaatcatacacttataaggcttgtctccaggtctctaacctcccgtttaattccttccgcgactcaccaagcacga 408  Q
    |||||||| |||  ||||| | ||||| |||||  ||||| |||||| |||||| |||||| |||||  || ||||||| |  |||||||||||||| ||    
T  38849693 tccgtcttacttttactcaagcggaaaccatacgattatagggcttgcctccagatctctagcctcctattcaattcctccttcgactcaccaagcaaga 38849594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 209 - 303
Target Start/End: Complemental strand, 19757763 - 19757669
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatata 303  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||||   || ||| ||||| ||| |||||||||||||||||    
T  19757763 tatttaaaccatgtaacttggggtatgatatgatctccaactttcacctccaaggtaggactactttgccttttgctaaagttacattccatata 19757669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 209 - 387
Target Start/End: Complemental strand, 27917267 - 27917093
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatataaatac 308  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||| ||| |||||  || || ||||||  ||||||||||| |||||||||        
T  27917267 tatttaaaccgtgtaacttgggatatgatatgatctccaactttcaccttcaaggtagaactagttctccttttactgaagttacaatccatataa---- 27917172  T
Q  309 tccgtcttgcttcaactcaggtggaaatcatacacttataaggcttgtctccaggtctctaacctcccgtttaattcct 387  Q
    |   ||||| ||| |||| ||  ||| |||||| |||||||||||||||| || |||| ||||||| | || |||||||    
T  27917171 tttatcttgattctactctggcagaagtcatacgcttataaggcttgtcttcaagtctttaacctctcattcaattcct 27917093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 244 - 410
Target Start/End: Complemental strand, 19757644 - 19757482
Alignment:
Q  244 tccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatataaatactccgtcttgcttcaactcaggtggaaatcatacac 343  Q
    |||||||||||||||||| ||||   || ||| ||||| ||| |||||||||||||||||    ||| |||||||||| ||| ||| |||   ||||| |    
T  19757644 tccaactttcacctccaaggtaggactactttgccttttgctaaagttacattccatata----ctctgtcttgcttctactaaggcggatgccatacgc 19757549  T
Q  344 ttataaggcttgtctccaggtctctaacctcccgtttaattccttccgcgactcaccaagcacgact 410  Q
    || ||||||||||||||| |||||||||||||| || ||||||| || | |||| ||||||| ||||    
T  19757548 ttctaaggcttgtctccaagtctctaacctcccattcaattcctccctcaactctccaagcaggact 19757482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 209 - 357
Target Start/End: Complemental strand, 9258574 - 9258434
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatataaatac 308  Q
    |||||||||||||||||||||| ||| ||||||| || ||  |||||||| ||    ||| || || |||||| | |||||||||||||||||||    |    
T  9258574 tatttaaaccgtgtaacttgggatatgatatgatatctaatgttcacctctaa----gacctacttctccttttgttgaagttacattccatata----c 9258483  T
Q  309 tccgtcttgcttcaactcaggtggaaatcatacacttataaggcttgtc 357  Q
    ||||||||||||| ||||||| ||||| || || ||| |||||||||||    
T  9258482 tccgtcttgcttctactcaggcggaaaccacacgcttttaaggcttgtc 9258434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 209 - 385
Target Start/End: Complemental strand, 29817200 - 29817028
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatataaatac 308  Q
    ||||| |||||||||||||  ||||| ||||||||||||||||||||||||||  ||||   | ||  ||||| | ||||||||||||||||    ||||    
T  29817200 tatttgaaccgtgtaacttatggtatgatatgatctccaactttcacctccaagatagaacaacttcaccttttgatgaagttacattccat----atac 29817105  T
Q  309 tccgtcttgcttcaactcaggtggaaatcatacacttataaggcttgtctccaggtctctaacctcccgtttaattc 385  Q
    || |||||| ||| | |||||  |||  || |||||| ||||||||||||| | |||| ||| ||| |||| |||||    
T  29817104 tctgtcttgattctattcaggcagaagccacacacttctaaggcttgtctctaagtctataagctcgcgttcaattc 29817028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 209 - 248
Target Start/End: Complemental strand, 28245132 - 28245093
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaa 248  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  28245132 tatttaagccgtgtaacttggggtattatatgatctccaa 28245093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 258
Target Start/End: Original strand, 1470684 - 1470733
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctc 258  Q
    |||||||||| || |||||  ||||| |||||||||||||||||||||||    
T  1470684 tatttaaaccatgcaacttttggtatgatatgatctccaactttcacctc 1470733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 258
Target Start/End: Complemental strand, 48221479 - 48221430
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctc 258  Q
    ||||||||  |||||||||| ||||| ||||||||| |||||||||||||    
T  48221479 tatttaaaatgtgtaacttgtggtatgatatgatcttcaactttcacctc 48221430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 257
Target Start/End: Complemental strand, 26490012 - 26489964
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacct 257  Q
    |||||||| | |||||||||| |||| ||||||||||| ||||||||||    
T  26490012 tatttaaatcatgtaacttggagtatgatatgatctcccactttcacct 26489964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 87; Significance: 1e-41; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 209 - 400
Target Start/End: Original strand, 12492429 - 12492616
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatataaatac 308  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| || || |||||  ||||||||||||||||||    ||||    
T  12492429 tatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctccaaggtagacctacttatccttccgctgaagttacattccat----atac 12492524  T
Q  309 tccgtcttgcttcaactcaggtggaaatcatacacttataaggcttgtctccaggtctctaacctcccgtttaattccttccgcgactcacc 400  Q
    ||||||||||||| ||||| | ||||  ||||| ||| ||||||||  ||||||||||||| ||||| ||| | ||||| || |||||||||    
T  12492525 tccgtcttgcttctactcaagcggaatccatacgcttctaaggcttacctccaggtctctagcctccagttcacttcctccctcgactcacc 12492616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 209 - 410
Target Start/End: Original strand, 42854591 - 42854797
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagct---------gaagttacattcca 299  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||||||| ||||||  | || |||||| |||         ||||||||||||||    
T  42854591 tatttaaaccgtgtaacttggggtatgatatgatctccacctttcacctccaaggtagacccacttctccttttgctccttttgctgaagttacattcca 42854690  T
Q  300 tataaatactccgtcttgcttcaactcaggtggaaatcatacacttataaggcttgtctccaggtctctaacctcccgtttaattccttccgcgactcac 399  Q
    ||||    |||||||||||||| ||||||| ||||| ||||| ||| ||||||||| ||||||||||||| |||||| ||||| |||| || ||||||||    
T  42854691 tata----ctccgtcttgcttctactcaggcggaaaccatacgcttttaaggcttgcctccaggtctctagcctcccatttaactcctccctcgactcac 42854786  T
Q  400 caagcacgact 410  Q
    |||||| ||||    
T  42854787 caagcaagact 42854797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 209 - 400
Target Start/End: Complemental strand, 36544847 - 36544660
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatataaatac 308  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||||| || || |||||  ||| ||||||||||||||    ||||    
T  36544847 tatttaaaccttgtaacttggggtatgatatgatctccaactttcacctccaaggtagacctacttctccttccgctaaagttacattccat----atac 36544752  T
Q  309 tccgtcttgcttcaactcaggtggaaatcatacacttataaggcttgtctccaggtctctaacctcccgtttaattccttccgcgactcacc 400  Q
    || |||||||||| ||||| ||||||  |||||  || ||||||||| ||| ||||||||| ||||||||| | ||||| || |||||||||    
T  36544751 tctgtcttgcttctactcaagtggaatccatacggttctaaggcttgcctctaggtctctagcctcccgttcacttcctccctcgactcacc 36544660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 209 - 400
Target Start/End: Original strand, 36565828 - 36566015
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatataaatac 308  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| || || |||||  | |||||||||||| ||||||    |    
T  36565828 tatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctccaaggtagacctacttctccttccgttgaagttacatttcatata----c 36565923  T
Q  309 tccgtcttgcttcaactcaggtggaaatcatacacttataaggcttgtctccaggtctctaacctcccgtttaattccttccgcgactcacc 400  Q
    ||  ||||||||| ||||| | ||||  ||||| ||| ||||||||| ||||||||||||| ||||||||| | ||||| || |||||||||    
T  36565924 tctatcttgcttctactcaagcggaatccatacgcttctaaggcttgcctccaggtctctagcctcccgttcacttcctccctcgactcacc 36566015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 209 - 402
Target Start/End: Original strand, 15215857 - 15216046
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatataaatac 308  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||||||  ||||||  | || |||||| |||||||||||||| |||     |||    
T  15215857 tatttaaaccgtgtaactttgggtatgatatgatctccaactttcacctccatggtagacccacttctccttttgctgaagttacatttcat----gtac 15215952  T
Q  309 tccgtcttgcttcaactcaggtggaaatcatacacttataaggcttgtctccaggtctctaacctcccgtttaattccttccgcgactcaccaa 402  Q
    ||||||||||||| ||||||| ||||| ||||  ||| ||||  ||| ||||||||||||| ||||||  |||| |||| || |||||||||||    
T  15215953 tccgtcttgcttctactcaggcggaaaccatatgcttctaagttttgcctccaggtctctagcctcccacttaagtcctccctcgactcaccaa 15216046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 212 - 335
Target Start/End: Original strand, 4033084 - 4033203
Alignment:
Q  212 ttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatataaatactcc 311  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||| |  |  |||||| ||||||||||||||||||    |||||||    
T  4033084 ttaaaccgtgtaacttggggtatgatatgatctccaactttcatctccaaggtagaccttctactccttttgctgaagttacattccat----atactcc 4033179  T
Q  312 gtcttgcttcaactcaggtggaaa 335  Q
    |||||| ||| ||||||| |||||    
T  4033180 gtcttgtttctactcaggcggaaa 4033203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 278 - 371
Target Start/End: Complemental strand, 13984256 - 13984167
Alignment:
Q  278 ctttagctgaagttacattccatataaatactccgtcttgcttcaactcaggtggaaatcatacacttataaggcttgtctccaggtctctaac 371  Q
    |||| |||||||||||||||||||||    ||| |||||||||| ||||| | |||| |||||||||| ||||||||||||||| |||||||||    
T  13984256 cttttgctgaagttacattccatata----ctctgtcttgcttctactcatgcggaagtcatacacttctaaggcttgtctccaagtctctaac 13984167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 209 - 296
Target Start/End: Original strand, 8880021 - 8880108
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacatt 296  Q
    |||||||||||||||||||||| ||| ||||||| | |||||||||||| ||  || ||| || || |||||| ||||||||||||||    
T  8880021 tatttaaaccgtgtaacttgggatatgatatgattttcaactttcaccttcacggtcgacctacttctccttttgctgaagttacatt 8880108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 209 - 258
Target Start/End: Original strand, 18849702 - 18849751
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctc 258  Q
    |||||||||||||||||||||||||| ||||||||||||| ||| |||||    
T  18849702 tatttaaaccgtgtaacttggggtatgatatgatctccaatttttacctc 18849751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 211 - 260
Target Start/End: Complemental strand, 29735510 - 29735461
Alignment:
Q  211 tttaaaccgtgtaacttggggtattatatgatctccaactttcacctcca 260  Q
    |||||| ||| ||||||||||||| ||||||||||| |||||||||||||    
T  29735510 tttaaatcgtataacttggggtatgatatgatctcccactttcacctcca 29735461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 257
Target Start/End: Original strand, 43732231 - 43732279
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacct 257  Q
    |||||||||||||| ||||| | ||| ||||||||||||||||||||||    
T  43732231 tatttaaaccgtgttacttgtgctatgatatgatctccaactttcacct 43732279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 252
Target Start/End: Original strand, 45332074 - 45332117
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaacttt 252  Q
    |||||||||||||||||||| ||||| | |||||||||||||||    
T  45332074 tatttaaaccgtgtaacttgtggtatgacatgatctccaacttt 45332117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 209 - 267
Target Start/End: Complemental strand, 13984730 - 13984672
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtaga 267  Q
    ||||||||||||||| |||||||||| ||||||||| |  ||||||||| ||| |||||    
T  13984730 tatttaaaccgtgtatcttggggtatgatatgatcttcttctttcaccttcaaggtaga 13984672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 209 - 258
Target Start/End: Complemental strand, 25985235 - 25985188
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctc 258  Q
    |||||||||||||||||||| ||||| ||||||  |||||||||||||||    
T  25985235 tatttaaaccgtgtaacttgtggtatgatatga--tccaactttcacctc 25985188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 258
Target Start/End: Original strand, 41444891 - 41444940
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctc 258  Q
    ||||||||||  |||||||| ||||| |||||||||||| ||||||||||    
T  41444891 tatttaaaccaagtaacttgtggtatgatatgatctccacctttcacctc 41444940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 71; Significance: 5e-32; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 209 - 376
Target Start/End: Original strand, 12185 - 12348
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatataaatac 308  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||| | || |||||| || || |||||| ||||||||||||||| ||||||        
T  12185 tatttaaaccatgtaacttggggtatgatatgatctccaactttcaccgcgaaggtagacctacttctccttttgctgaagttacattctatataa---- 12280  T
Q  309 tccgtcttgcttcaactcaggtggaaatcatacacttataaggcttgtctccaggtctctaacctccc 376  Q
    |||||||| |||| ||||| | ||||| ||||| ||| ||||||||| ||| ||||||||| ||||||    
T  12281 tccgtcttacttctactcaagcggaaaccatacgcttctaaggcttgcctctaggtctctagcctccc 12348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0570 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 209 - 303
Target Start/End: Original strand, 2857 - 2951
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatata 303  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| | || |||||  |||||||||||||||||||||    
T  2857 tatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctccaatgtagactgacttctccttccgctgaagttacattccatata 2951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 209 - 261
Target Start/End: Complemental strand, 5887 - 5835
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaa 261  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  5887 tatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctccaa 5835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 213 - 398
Target Start/End: Original strand, 88514 - 88702
Alignment:
Q  213 taaaccgtgtaacttggggtattatatgatctccaactttcacctccaaagtagacttaattttcctttagctgaagttacattccatataaatactccg 312  Q
    |||||| |||||||||  ||||  |||||| |||| |||||| |||||| ||| || || || |||||| ||||||||||||||||||    |||||| |    
T  88514 taaaccatgtaacttgaagtatggtatgatttccatctttcatctccaaggtaaacctacttctccttttgctgaagttacattccat----atactctg 88609  T
Q  313 tcttgcttc-------aactcaggtggaaatcatacacttataaggcttgtctccaggtctctaacctcccgtttaattccttccgcgactca 398  Q
    |||||||||        ||||| ||||||| ||||| ||| ||||||||| |||||  |||||| ||||||||| ||||| | || |||||||    
T  88610 tcttgcttcctctacgtactcatgtggaaaccatacgcttctaaggcttgcctccaaatctctagcctcccgttcaattcatccctcgactca 88702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 209 - 261
Target Start/End: Complemental strand, 82416 - 82364
Alignment:
Q  209 tatttaaaccgtgtaacttggggtattatatgatctccaactttcacctccaa 261  Q
    |||||||||||||||||||| ||||| |||| ||||||||||||| |||||||    
T  82416 tatttaaaccgtgtaacttgtggtatgatataatctccaactttcgcctccaa 82364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 374
Target Start/End: Original strand, 24937 - 24969
Alignment:
Q  342 acttataaggcttgtctccaggtctctaacctc 374  Q
    |||||||||||||||||||| ||||||||||||    
T  24937 acttataaggcttgtctccaagtctctaacctc 24969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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