View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21082_high_11 (Length: 335)

Name: NF21082_high_11
Description: NF21082
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21082_high_11
NF21082_high_11
[»] chr6 (55 HSPs)
chr6 (1-320)||(29518597-29518916)
chr6 (1-188)||(10074240-10074427)
chr6 (1-169)||(16454669-16454838)
chr6 (1-169)||(2578730-2578899)
chr6 (1-158)||(2579779-2579936)
chr6 (1-188)||(2377848-2378034)
chr6 (1-169)||(2579387-2579556)
chr6 (1-169)||(16107772-16107943)
chr6 (1-130)||(2579045-2579173)
chr6 (5-180)||(26544147-26544321)
chr6 (1-89)||(32741273-32741361)
chr6 (1-88)||(16455001-16455088)
chr6 (1-88)||(29519014-29519101)
chr6 (1-127)||(35210298-35210423)
chr6 (1-88)||(2578420-2578507)
chr6 (205-320)||(16107943-16108057)
chr6 (1-66)||(3409754-3409819)
chr6 (1-130)||(12071626-12071755)
chr6 (1-88)||(2843649-2843736)
chr6 (11-188)||(3409405-3409567)
chr6 (1-89)||(1846842-1846929)
chr6 (35-119)||(2975033-2975117)
chr6 (1-55)||(3409353-3409407)
chr6 (1-135)||(12084965-12085098)
chr6 (1-86)||(5832007-5832091)
chr6 (1-75)||(14748332-14748402)
chr6 (4-67)||(2378223-2378286)
chr6 (4-76)||(3415555-3415629)
chr6 (1-169)||(10073887-10074055)
chr6 (27-160)||(31714788-31714922)
chr6 (1-66)||(3058320-3058385)
chr6 (209-320)||(2579653-2579765)
chr6 (1-88)||(10073593-10073680)
chr6 (254-320)||(10074152-10074219)
chr6 (6-64)||(16108150-16108208)
chr6 (205-320)||(2579269-2579387)
chr6 (1-78)||(593694-593773)
chr6 (226-317)||(33605879-33605969)
chr6 (1-62)||(6999799-6999860)
chr6 (1-172)||(33605740-33605906)
chr6 (210-320)||(10073775-10073884)
chr6 (258-320)||(16454838-16454901)
chr6 (258-315)||(12092201-12092261)
chr6 (150-188)||(14789403-14789441)
chr6 (5-50)||(1950200-1950245)
chr6 (205-320)||(2578606-2578730)
chr6 (275-320)||(3409611-3409656)
chr6 (5-126)||(12092421-12092542)
chr6 (1-65)||(1127454-1127518)
chr6 (284-320)||(10074524-10074560)
chr6 (284-320)||(35210449-35210485)
chr6 (286-315)||(8481888-8481917)
chr6 (1-66)||(17135068-17135133)
chr6 (257-320)||(2378059-2378122)
chr6 (1-57)||(10902438-10902494)
[»] chr7 (60 HSPs)
chr7 (1-176)||(37533253-37533428)
chr7 (1-179)||(37532897-37533074)
chr7 (4-197)||(22566905-22567100)
chr7 (192-320)||(7553891-7554019)
chr7 (1-137)||(1085544-1085680)
chr7 (1-173)||(47129189-47129360)
chr7 (1-75)||(37167875-37167949)
chr7 (1-87)||(37532729-37532815)
chr7 (1-169)||(8128336-8128505)
chr7 (1-170)||(45433335-45433502)
chr7 (1-169)||(45754809-45754976)
chr7 (1-89)||(47129463-47129550)
chr7 (3-173)||(28300470-28300630)
chr7 (1-168)||(40094664-40094838)
chr7 (8-172)||(30245256-30245421)
chr7 (1-74)||(23368-23441)
chr7 (8-105)||(30253671-30253768)
chr7 (1-75)||(11845285-11845359)
chr7 (8-105)||(30244453-30244550)
chr7 (205-320)||(48243241-48243356)
chr7 (1-88)||(34218011-34218098)
chr7 (1-75)||(30032661-30032735)
chr7 (93-186)||(14681323-14681415)
chr7 (247-320)||(14681431-14681506)
chr7 (1-76)||(30244364-30244439)
chr7 (1-63)||(9901737-9901799)
chr7 (1-72)||(6054654-6054725)
chr7 (1-89)||(30245171-30245255)
chr7 (4-66)||(24177532-24177594)
chr7 (1-74)||(45434730-45434803)
chr7 (193-289)||(47129343-47129439)
chr7 (1-86)||(30253586-30253667)
chr7 (1-57)||(36939741-36939797)
chr7 (226-320)||(37345819-37345913)
chr7 (1-55)||(19122825-19122879)
chr7 (1-78)||(7517674-7517751)
chr7 (4-172)||(37345678-37345846)
chr7 (1-66)||(41854728-41854793)
chr7 (140-188)||(45697752-45697800)
chr7 (1-65)||(118299-118365)
chr7 (209-320)||(1085413-1085526)
chr7 (1-63)||(28300255-28300317)
chr7 (254-320)||(40094555-40094621)
chr7 (254-320)||(45697841-45697907)
chr7 (1-62)||(29157659-29157720)
chr7 (204-313)||(45434514-45434625)
chr7 (254-320)||(30244628-30244695)
chr7 (1-100)||(36623054-36623153)
chr7 (107-169)||(48243356-48243419)
chr7 (2-56)||(4719305-4719359)
chr7 (28-88)||(5825562-5825621)
chr7 (217-320)||(30245385-30245488)
chr7 (273-320)||(30245024-30245071)
chr7 (1-52)||(45755021-45755072)
chr7 (8-62)||(20599417-20599471)
chr7 (258-318)||(10342192-10342253)
chr7 (1-42)||(24838724-24838765)
chr7 (204-317)||(28300365-28300476)
chr7 (1-33)||(7554119-7554151)
chr7 (276-320)||(30244220-30244264)
[»] chr3 (75 HSPs)
chr3 (1-199)||(22303820-22304019)
chr3 (16-188)||(22304302-22304476)
chr3 (1-158)||(53577458-53577616)
chr3 (1-172)||(15772948-15773119)
chr3 (1-153)||(29644811-29644966)
chr3 (1-160)||(37990881-37991041)
chr3 (6-169)||(3135350-3135513)
chr3 (1-173)||(33803143-33803316)
chr3 (1-169)||(54018093-54018262)
chr3 (5-169)||(32462795-32462960)
chr3 (1-101)||(43346754-43346855)
chr3 (38-188)||(41360014-41360164)
chr3 (35-161)||(9239941-9240067)
chr3 (1-88)||(32589797-32589884)
chr3 (214-320)||(37990803-37990908)
chr3 (1-78)||(37990626-37990703)
chr3 (1-101)||(54017780-54017880)
chr3 (2-81)||(25755489-25755568)
chr3 (1-63)||(42342092-42342154)
chr3 (1-119)||(52634769-52634886)
chr3 (1-66)||(22304663-22304728)
chr3 (1-92)||(42342360-42342452)
chr3 (1-169)||(41359660-41359829)
chr3 (1-66)||(12114561-12114626)
chr3 (1-66)||(35946616-35946681)
chr3 (1-66)||(41359490-41359555)
chr3 (204-313)||(8328259-8328368)
chr3 (251-320)||(22304495-22304565)
chr3 (1-66)||(25739424-25739489)
chr3 (1-65)||(31190103-31190167)
chr3 (11-78)||(8328374-8328441)
chr3 (1-88)||(29644558-29644645)
chr3 (254-320)||(32462723-32462790)
chr3 (1-88)||(15773286-15773375)
chr3 (51-144)||(53577627-53577721)
chr3 (210-316)||(54017984-54018090)
chr3 (1-62)||(22303662-22303723)
chr3 (5-57)||(39934963-39935015)
chr3 (208-319)||(21832505-21832614)
chr3 (204-273)||(8328154-8328222)
chr3 (1-62)||(45395656-45395717)
chr3 (1-66)||(50612446-50612511)
chr3 (192-319)||(3135237-3135364)
chr3 (1-88)||(32462536-32462622)
chr3 (274-320)||(15773140-15773186)
chr3 (1-66)||(21832344-21832407)
chr3 (278-320)||(42342254-42342296)
chr3 (1-54)||(39914346-39914399)
chr3 (4-65)||(45901811-45901872)
chr3 (1-117)||(8327998-8328115)
chr3 (35-78)||(1634302-1634345)
chr3 (234-320)||(11661858-11661945)
chr3 (1-56)||(39389164-39389219)
chr3 (4-66)||(44160546-44160606)
chr3 (69-135)||(3135033-3135098)
chr3 (5-39)||(3135099-3135133)
chr3 (286-320)||(22304208-22304242)
chr3 (8-74)||(43978856-43978922)
chr3 (278-320)||(52634889-52634931)
chr3 (1-90)||(54017522-54017612)
chr3 (1-66)||(53117974-53118039)
chr3 (133-188)||(4823507-4823563)
chr3 (1-73)||(11662046-11662117)
chr3 (2-57)||(49336694-49336750)
chr3 (1-48)||(4823749-4823796)
chr3 (254-320)||(9240079-9240146)
chr3 (36-67)||(37726625-37726656)
chr3 (275-320)||(4823606-4823651)
chr3 (70-103)||(50329573-50329606)
chr3 (6-58)||(9240248-9240300)
chr3 (18-78)||(33175646-33175706)
chr3 (192-260)||(33803094-33803161)
chr3 (1-33)||(39336002-39336034)
chr3 (20-119)||(39336177-39336276)
chr3 (69-97)||(47157662-47157690)
[»] chr8 (81 HSPs)
chr8 (1-188)||(1014122-1014309)
chr8 (1-188)||(3669781-3669967)
chr8 (10-188)||(9309085-9309262)
chr8 (1-137)||(34834970-34835104)
chr8 (1-138)||(18371921-18372058)
chr8 (1-173)||(147545-147718)
chr8 (1-130)||(40518165-40518294)
chr8 (7-135)||(18372214-18372342)
chr8 (1-165)||(37544391-37544554)
chr8 (1-76)||(40579258-40579333)
chr8 (1-137)||(3038217-3038354)
chr8 (209-321)||(3038091-3038202)
chr8 (1-65)||(5915961-5916025)
chr8 (1-169)||(9483084-9483251)
chr8 (1-61)||(3670154-3670214)
chr8 (1-168)||(8919042-8919208)
chr8 (1-88)||(30441179-30441266)
chr8 (1-75)||(6876852-6876926)
chr8 (211-316)||(40518470-40518575)
chr8 (18-158)||(3037874-3038016)
chr8 (238-320)||(3669973-3670056)
chr8 (1-137)||(30359365-30359500)
chr8 (247-320)||(1014033-1014107)
chr8 (1-66)||(6651588-6651653)
chr8 (4-105)||(40579466-40579567)
chr8 (1-160)||(45122718-45122882)
chr8 (6-61)||(9482608-9482663)
chr8 (1-88)||(20870550-20870637)
chr8 (1-80)||(41129082-41129161)
chr8 (1-75)||(34835303-34835377)
chr8 (1-75)||(34835569-34835643)
chr8 (1-75)||(34835835-34835909)
chr8 (204-320)||(147712-147823)
chr8 (1-74)||(43274626-43274699)
chr8 (208-320)||(8918928-8919039)
chr8 (1-171)||(9608839-9609018)
chr8 (1-55)||(45122067-45122121)
chr8 (5-57)||(6731993-6732045)
chr8 (1-88)||(18371637-18371725)
chr8 (214-317)||(18371821-18371925)
chr8 (1-61)||(30359703-30359763)
chr8 (214-320)||(18372533-18372640)
chr8 (1-64)||(33113368-33113431)
chr8 (1-55)||(147914-147968)
chr8 (1-63)||(40518676-40518738)
chr8 (227-320)||(45122907-45123000)
chr8 (1-66)||(1513914-1513979)
chr8 (6-119)||(9620624-9620737)
chr8 (5-57)||(1013879-1013931)
chr8 (3-75)||(9309451-9309522)
chr8 (257-320)||(30359539-30359603)
chr8 (1-119)||(4154614-4154730)
chr8 (273-320)||(18372418-18372465)
chr8 (1-88)||(41972255-41972341)
chr8 (3-65)||(25561815-25561877)
chr8 (8-66)||(45123107-45123165)
chr8 (1-81)||(32640515-32640596)
chr8 (279-320)||(34835427-34835468)
chr8 (279-320)||(34835693-34835734)
chr8 (204-320)||(45122515-45122627)
chr8 (1-65)||(8918764-8918828)
chr8 (225-320)||(9482766-9482857)
chr8 (1-77)||(45121898-45121974)
chr8 (274-320)||(9309303-9309349)
chr8 (274-320)||(45121819-45121865)
chr8 (258-314)||(4154449-4154506)
chr8 (85-169)||(9482921-9483005)
chr8 (5-58)||(45121663-45121716)
chr8 (276-320)||(6731856-6731900)
chr8 (4-67)||(70272-70335)
chr8 (1-56)||(12283966-12284021)
chr8 (258-320)||(18373094-18373157)
chr8 (43-95)||(3038020-3038074)
chr8 (274-320)||(43274731-43274777)
chr8 (205-242)||(9483047-9483084)
chr8 (273-310)||(18372870-18372907)
chr8 (1-66)||(32305571-32305636)
chr8 (4-44)||(9609182-9609222)
chr8 (5-45)||(16524463-16524503)
chr8 (5-64)||(18380020-18380077)
chr8 (2-58)||(34629708-34629764)
[»] chr5 (64 HSPs)
chr5 (1-186)||(6500544-6500729)
chr5 (1-172)||(38427313-38427486)
chr5 (1-188)||(9498534-9498718)
chr5 (1-176)||(32487487-32487661)
chr5 (1-165)||(25328029-25328195)
chr5 (5-170)||(623916-624080)
chr5 (4-172)||(3295246-3295406)
chr5 (1-88)||(40296292-40296379)
chr5 (5-137)||(299587-299720)
chr5 (1-87)||(3294993-3295079)
chr5 (1-75)||(15370193-15370267)
chr5 (4-88)||(27502013-27502097)
chr5 (1-99)||(6500916-6501015)
chr5 (1-75)||(42405588-42405660)
chr5 (4-130)||(6224293-6224418)
chr5 (192-312)||(13415931-13416051)
chr5 (1-90)||(34753001-34753089)
chr5 (1-66)||(41632876-41632941)
chr5 (212-320)||(3295180-3295287)
chr5 (7-165)||(26075058-26075219)
chr5 (1-88)||(26899995-26900081)
chr5 (1-64)||(36492218-36492281)
chr5 (1-75)||(624290-624364)
chr5 (4-78)||(1028504-1028578)
chr5 (5-80)||(15370500-15370575)
chr5 (1-100)||(12662614-12662716)
chr5 (261-320)||(24489365-24489424)
chr5 (1-51)||(13415774-13415824)
chr5 (1-130)||(35150100-35150228)
chr5 (1-66)||(41170728-41170793)
chr5 (204-320)||(624077-624192)
chr5 (1-61)||(18603124-18603184)
chr5 (1-61)||(33747865-33747925)
chr5 (4-78)||(36568556-36568628)
chr5 (251-320)||(6500749-6500819)
chr5 (238-319)||(9498411-9498493)
chr5 (4-88)||(301048-301132)
chr5 (70-173)||(13416033-13416136)
chr5 (4-43)||(795254-795293)
chr5 (5-72)||(11416970-11417037)
chr5 (5-64)||(24489207-24489266)
chr5 (273-320)||(26074946-26074993)
chr5 (258-320)||(36522057-36522120)
chr5 (258-311)||(31509555-31509609)
chr5 (204-313)||(35150607-35150719)
chr5 (9-61)||(24489583-24489635)
chr5 (192-319)||(26074477-26074605)
chr5 (54-173)||(35150491-35150613)
chr5 (228-320)||(38427461-38427553)
chr5 (1-45)||(5723811-5723855)
chr5 (5-57)||(38427645-38427697)
chr5 (254-320)||(13785770-13785837)
chr5 (37-188)||(13785879-13786029)
chr5 (1-56)||(26074155-26074210)
chr5 (1-56)||(26074706-26074761)
chr5 (45-127)||(3622828-3622910)
chr5 (4-66)||(35167837-35167899)
chr5 (261-320)||(36522398-36522459)
chr5 (84-129)||(24489515-24489560)
chr5 (5-66)||(26590909-26590970)
chr5 (12-89)||(35150810-35150886)
chr5 (29-88)||(795081-795141)
chr5 (5-65)||(13785632-13785692)
chr5 (292-320)||(15370380-15370408)
[»] chr4 (75 HSPs)
chr4 (1-183)||(3340901-3341083)
chr4 (1-199)||(10246013-10246212)
chr4 (1-318)||(44621096-44621418)
chr4 (1-188)||(41370451-41370637)
chr4 (32-168)||(45496675-45496812)
chr4 (1-170)||(23817572-23817743)
chr4 (1-173)||(20825930-20826104)
chr4 (1-164)||(39404112-39404276)
chr4 (1-129)||(44620753-44620880)
chr4 (1-130)||(49076766-49076893)
chr4 (1-128)||(22028303-22028431)
chr4 (1-170)||(16889429-16889598)
chr4 (195-320)||(39404273-39404392)
chr4 (1-105)||(25483430-25483534)
chr4 (1-169)||(31691246-31691415)
chr4 (1-81)||(39792842-39792922)
chr4 (1-169)||(43174235-43174405)
chr4 (17-118)||(19895406-19895506)
chr4 (1-78)||(36629331-36629408)
chr4 (1-105)||(50002520-50002625)
chr4 (204-320)||(54108796-54108912)
chr4 (5-169)||(2740798-2740953)
chr4 (210-319)||(2740956-2741067)
chr4 (192-319)||(20826086-20826213)
chr4 (93-188)||(18933008-18933102)
chr4 (1-130)||(44620447-44620568)
chr4 (192-320)||(16889315-16889444)
chr4 (1-78)||(43827533-43827610)
chr4 (1-78)||(50630740-50630817)
chr4 (1-88)||(36608636-36608723)
chr4 (1-170)||(54108631-54108799)
chr4 (1-67)||(54343004-54343070)
chr4 (1-66)||(55933121-55933186)
chr4 (1-64)||(1731646-1731709)
chr4 (1-55)||(54109006-54109060)
chr4 (1-58)||(32941128-32941185)
chr4 (21-81)||(11702281-11702341)
chr4 (4-64)||(50459818-50459878)
chr4 (3-55)||(52884792-52884844)
chr4 (1-64)||(39404492-39404555)
chr4 (4-75)||(54017583-54017654)
chr4 (6-88)||(34004560-34004642)
chr4 (1-62)||(4390102-4390163)
chr4 (1-66)||(22183261-22183326)
chr4 (1-89)||(22027935-22028023)
chr4 (1-65)||(36572113-36572177)
chr4 (258-318)||(44620592-44620652)
chr4 (1-88)||(18879900-18879987)
chr4 (4-67)||(18932745-18932808)
chr4 (192-313)||(45489501-45489622)
chr4 (210-320)||(49076610-49076722)
chr4 (1-75)||(54936290-54936363)
chr4 (204-304)||(22028163-22028263)
chr4 (1-65)||(16888814-16888878)
chr4 (1-53)||(19504790-19504842)
chr4 (4-60)||(20826314-20826370)
chr4 (15-75)||(49076439-49076499)
chr4 (1-65)||(49303000-49303064)
chr4 (1-64)||(34646648-34646711)
chr4 (1-128)||(45489650-45489776)
chr4 (1-119)||(11783498-11783615)
chr4 (259-320)||(36629172-36629234)
chr4 (5-89)||(39698918-39699002)
chr4 (4-64)||(45489331-45489391)
chr4 (1-48)||(4955332-4955379)
chr4 (20-61)||(23817457-23817498)
chr4 (88-168)||(50627668-50627748)
chr4 (69-101)||(27426771-27426803)
chr4 (254-305)||(41707340-41707392)
chr4 (1-61)||(43174601-43174661)
chr4 (1-33)||(45496899-45496931)
chr4 (281-311)||(5882092-5882122)
chr4 (257-313)||(18932926-18932983)
chr4 (12-61)||(41370763-41370812)
chr4 (205-278)||(43174405-43174477)
[»] chr1 (68 HSPs)
chr1 (7-169)||(44290720-44290882)
chr1 (1-188)||(50051902-50052087)
chr1 (1-185)||(11977038-11977224)
chr1 (1-197)||(26661766-26661962)
chr1 (1-188)||(48588364-48588552)
chr1 (1-173)||(34649532-34649705)
chr1 (56-188)||(48588739-48588870)
chr1 (1-168)||(22077392-22077559)
chr1 (1-320)||(34364601-34364919)
chr1 (1-171)||(66366-66536)
chr1 (1-130)||(31767097-31767225)
chr1 (1-127)||(9956003-9956129)
chr1 (6-119)||(37850547-37850659)
chr1 (3-172)||(22077722-22077891)
chr1 (1-169)||(37555823-37555990)
chr1 (1-170)||(41157085-41157257)
chr1 (1-65)||(3537599-3537663)
chr1 (1-130)||(41184341-41184475)
chr1 (1-88)||(45084470-45084557)
chr1 (1-102)||(17294671-17294773)
chr1 (1-75)||(44290448-44290522)
chr1 (1-65)||(32168698-32168762)
chr1 (205-320)||(37555990-37556105)
chr1 (1-67)||(11977374-11977440)
chr1 (1-67)||(14318961-14319027)
chr1 (7-67)||(41142473-41142533)
chr1 (209-309)||(41184198-41184298)
chr1 (1-65)||(41759577-41759641)
chr1 (1-75)||(40082500-40082574)
chr1 (251-320)||(50051813-50051883)
chr1 (1-66)||(26661521-26661586)
chr1 (222-320)||(66250-66349)
chr1 (258-320)||(3537309-3537372)
chr1 (1-56)||(37556205-37556260)
chr1 (5-64)||(41157473-41157532)
chr1 (251-320)||(44290620-44290690)
chr1 (247-320)||(48588650-48588724)
chr1 (4-81)||(3875315-3875392)
chr1 (6-75)||(21378049-21378118)
chr1 (1-50)||(38804370-38804419)
chr1 (1-66)||(45493973-45494038)
chr1 (1-65)||(5319965-5320029)
chr1 (257-320)||(22077656-22077719)
chr1 (234-320)||(26661686-26661773)
chr1 (5-88)||(50051666-50051748)
chr1 (1-61)||(3550814-3550871)
chr1 (254-323)||(47379942-47380012)
chr1 (88-179)||(3537410-3537496)
chr1 (258-320)||(24448212-24448274)
chr1 (5-67)||(24600312-24600374)
chr1 (273-319)||(30630800-30630846)
chr1 (1-55)||(45839725-45839779)
chr1 (1-66)||(29798293-29798358)
chr1 (1-66)||(39066200-39066264)
chr1 (6-65)||(4266798-4266855)
chr1 (208-320)||(22077283-22077393)
chr1 (1-57)||(34365019-34365075)
chr1 (244-309)||(3537495-3537562)
chr1 (254-320)||(1188392-1188457)
chr1 (10-88)||(24131965-24132043)
chr1 (274-316)||(41157323-41157365)
chr1 (1-86)||(19283434-19283519)
chr1 (1-66)||(22077109-22077174)
chr1 (1-171)||(47380060-47380231)
chr1 (83-116)||(30630586-30630619)
chr1 (1-34)||(32594747-32594780)
chr1 (255-320)||(50469242-50469306)
chr1 (1-57)||(5528762-5528818)
[»] chr2 (66 HSPs)
chr2 (1-163)||(36178508-36178669)
chr2 (1-137)||(37106018-37106154)
chr2 (1-198)||(29676623-29676819)
chr2 (1-188)||(14745544-14745731)
chr2 (1-188)||(5542876-5543062)
chr2 (1-171)||(6421479-6421648)
chr2 (1-173)||(7598322-7598494)
chr2 (4-173)||(23346333-23346502)
chr2 (1-130)||(6421825-6421954)
chr2 (1-125)||(42514743-42514866)
chr2 (196-320)||(3672954-3673079)
chr2 (1-130)||(35580659-35580788)
chr2 (1-129)||(962692-962818)
chr2 (1-172)||(40733976-40734149)
chr2 (4-88)||(5542602-5542686)
chr2 (192-320)||(36785727-36785854)
chr2 (1-88)||(36178148-36178235)
chr2 (1-173)||(3672795-3672968)
chr2 (208-320)||(42514899-42515009)
chr2 (4-66)||(6422207-6422269)
chr2 (1-63)||(37106282-37106344)
chr2 (1-89)||(6713071-6713160)
chr2 (1-65)||(15511495-15511559)
chr2 (1-73)||(15880357-15880429)
chr2 (258-320)||(40679790-40679852)
chr2 (4-78)||(41283462-41283536)
chr2 (6-90)||(1769991-1770075)
chr2 (1-88)||(31899080-31899166)
chr2 (257-319)||(40733813-40733876)
chr2 (1-75)||(3673162-3673236)
chr2 (1-63)||(33731742-33731804)
chr2 (1-75)||(36005870-36005944)
chr2 (1-62)||(40679632-40679693)
chr2 (1-173)||(40733611-40733777)
chr2 (1-100)||(30313271-30313370)
chr2 (1-88)||(40163349-40163436)
chr2 (1-51)||(5367549-5367599)
chr2 (251-320)||(5542787-5542857)
chr2 (197-307)||(23346489-23346594)
chr2 (216-320)||(38796382-38796487)
chr2 (1-66)||(6421720-6421785)
chr2 (204-316)||(6421996-6422109)
chr2 (204-320)||(7598488-7598605)
chr2 (1-103)||(38796578-38796684)
chr2 (210-320)||(28531475-28531583)
chr2 (17-78)||(16590993-16591054)
chr2 (4-60)||(7598698-7598754)
chr2 (279-319)||(40734231-40734271)
chr2 (5-64)||(29677006-29677065)
chr2 (29-100)||(30312912-30312983)
chr2 (258-312)||(30313110-30313165)
chr2 (1-60)||(37632602-37632661)
chr2 (258-320)||(41678530-41678593)
chr2 (274-320)||(29676851-29676897)
chr2 (258-315)||(30323396-30323454)
chr2 (252-312)||(14745463-14745524)
chr2 (268-320)||(34481589-34481642)
chr2 (83-131)||(36785880-36785927)
chr2 (1-46)||(28254258-28254301)
chr2 (1-63)||(28531316-28531378)
chr2 (281-319)||(40733472-40733510)
chr2 (192-240)||(6421632-6421679)
chr2 (35-103)||(12911432-12911500)
chr2 (277-317)||(35580552-35580592)
chr2 (292-320)||(37106156-37106184)
chr2 (60-188)||(37894968-37895094)
[»] scaffold0734 (2 HSPs)
scaffold0734 (192-320)||(5643-5771)
scaffold0734 (1-173)||(5491-5661)
[»] scaffold0702 (3 HSPs)
scaffold0702 (1-188)||(392-578)
scaffold0702 (4-67)||(145-208)
scaffold0702 (257-320)||(304-367)
[»] scaffold0078 (2 HSPs)
scaffold0078 (1-188)||(5076-5262)
scaffold0078 (238-316)||(5268-5347)
[»] scaffold0391 (6 HSPs)
scaffold0391 (192-320)||(1270-1398)
scaffold0391 (35-157)||(1591-1713)
scaffold0391 (216-320)||(3149-3254)
scaffold0391 (1-75)||(1096-1170)
scaffold0391 (89-170)||(1383-1465)
scaffold0391 (209-318)||(1464-1575)
[»] scaffold0027 (1 HSPs)
scaffold0027 (1-66)||(47454-47519)
[»] scaffold0113 (2 HSPs)
scaffold0113 (1-125)||(39549-39672)
scaffold0113 (258-314)||(39771-39828)
[»] scaffold0171 (1 HSPs)
scaffold0171 (277-320)||(17620-17663)


Alignment Details
Target: chr6 (Bit Score: 300; Significance: 1e-169; HSPs: 55)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 300; E-Value: 1e-169
Query Start/End: Original strand, 1 - 320
Target Start/End: Original strand, 29518597 - 29518916
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagag 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||||    
T  29518597 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcctctcataacccaacagtggtatcagag 29518696  T
Q  101 ccccggttcgacgaagggtgcgaccgaggccgccggttagttgcgcagaaagcagcaacgacggtacaagcagcaagtggctccttgtacggcaacggca 200  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29518697 ccccggttcgacgaagggtgcgaccgagaccgccggttagttgcgcagaaagcagcaacgacggtacaagcagcaagtggctccttgtacggcaacggca 29518796  T
Q  201 gtgcaagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttgagggggagcacgatgaattgatggactc 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  29518797 gtgcaagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttccgcttgagggggagcacgatgaattgatggactc 29518896  T
Q  301 acacttgagggggagtgttg 320  Q
    ||||||||||||||||||||    
T  29518897 acacttgagggggagtgttg 29518916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 10074427 - 10074240
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagag 100  Q
    |||||||||||||||||||||||||  || ||| |||||||||||||||||||||||  |||||||  ||||||||  ||| |||||  | |||||||||    
T  10074427 ttgggtaagagtgtggtgtctctctcactagtgtggttgttctagcctcgatgtggatagtcccccaggctccccttgtgacccaactcttgtatcagag 10074328  T
Q  101 ccccggttcgacgaagggtgcgaccgaggccgccggttagttgcgcagaaagcagcaacgacggtacaagcagcaagtggctccttgt 188  Q
    ||||||||||| ||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  10074327 ccccggttcgaagaagggtacgaccgaggccgccggtcagttgcgcagaaagtagcaacgacggtacaagcagcaagtggctcattgt 10074240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 16454669 - 16454838
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagag 100  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||    
T  16454669 ttggataagagtgtggcgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgagctcccctcgtgacccaacagtggtatcagag 16454768  T
Q  101 ccccggttcgacgaagggtgcgaccgaggccgccggttag-ttgcgcagaaagcagcaacgacggtacaa 169  Q
    ||| ||||||||||||||| |||||||||   |||||  | |||||||||||||| ||||||||||||||    
T  16454769 cccaggttcgacgaagggtacgaccgaggtaaccggtccgtttgcgcagaaagcaacaacgacggtacaa 16454838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 2578899 - 2578730
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagag 100  Q
    ||||||||||||||||||||||| ||||||||| |||||||||  |||||||||||||||||||||  |||||||||||||  |||||||||||||||||    
T  2578899 ttgggtaagagtgtggtgtctcttttgcttgtgtggttgttctgacctcgatgtggacggtcccccaggctcccctcatgaatcaacagtggtatcagag 2578800  T
Q  101 ccccggttcgacgaagggtgcgaccgaggccgccggttag-ttgcgcagaaagcagcaacgacggtacaa 169  Q
    ||||||||||||||||||| |||||||||| ||||||  | ||| |||||||||||||||| || |||||    
T  2578799 ccccggttcgacgaagggtacgaccgaggcagccggtccgcttgggcagaaagcagcaacggcgttacaa 2578730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 2579936 - 2579779
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagag 100  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||  ||||||||||| | ||||||||||||||||||    
T  2579936 ttgggtaagaatgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggaaggt-ccccaagctcccctcattacccaacagtggtatcagag 2579838  T
Q  101 ccccggttcgacgaagggtgcgaccgaggccgccggttag-ttgcgcagaaagcagcaa 158  Q
    ||||||||| ||||||||| |||||||||| ||| ||| | ||||||||||||||||||    
T  2579837 ccccggttccacgaagggtacgaccgaggcagccagttcgtttgcgcagaaagcagcaa 2579779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 2377848 - 2378034
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagag 100  Q
    ||||||||||||||||||||| ||||||||| | |||| |||||||||||||||||| ||||||||| ||| |||   ||| ||||||||||||||||||    
T  2377848 ttgggtaagagtgtggtgtctttcttgcttgagtggtttttctagcctcgatgtggaaggtcccccgagcttccccagtgacccaacagtggtatcagag 2377947  T
Q  101 ccccggttcgacgaagggtgcgaccgaggccgccggttagttgcgcagaaagcagcaacgacggtacaagcagcaagtggctccttgt 188  Q
    ||||||||||||||||||||| |||||||  | ||| | |||||| ||||||  |||||  | |||||||||||||||||||||||||    
T  2377948 ccccggttcgacgaagggtgcaaccgaggtagtcgg-tcgttgcgaagaaagtcgcaacagcagtacaagcagcaagtggctccttgt 2378034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 2579556 - 2579387
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagag 100  Q
    |||||||| ||| |||||||||||||||||||| |||||||||| |||||||||||| ||| || |  |||||||||| ||  |||||||||||||||||    
T  2579556 ttgggtaaaagtatggtgtctctcttgcttgtgtggttgttctaacctcgatgtggatggttccacaggctcccctcacgaatcaacagtggtatcagag 2579457  T
Q  101 ccccggttcgacgaagggtgcgaccgaggccgccggt-tagttgcgcagaaagcagcaacgacggtacaa 169  Q
    ||||||||||||||| ||| |||||||||| ||||||  | |||||||||||||||||||| ||||||||    
T  2579456 ccccggttcgacgaacggtacgaccgaggcagccggtccacttgcgcagaaagcagcaacggcggtacaa 2579387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 16107772 - 16107943
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccc-tca-tgatccaacagtggtatcag 98  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||| ||||   |||||| ||| ||| ||||||||||||||||    
T  16107772 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgctctagcctcgatgtgggtggtacccctaactccccttcagtgacccaacagtggtatcag 16107871  T
Q  99 agccccggttcgacgaagggtgcgaccgaggccgccggt-tagttgcgcagaaagcagcaacgacggtacaa 169  Q
    |||||||||||||||||||||  ||||||||| ||||||  | ||| |||||||||||||||| ||||||||    
T  16107872 agccccggttcgacgaagggtatgaccgaggcagccggtccatttgtgcagaaagcagcaacggcggtacaa 16107943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 2579173 - 2579045
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagag 100  Q
    |||| |||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||| ||||| ||||||||||||| ||||||||| ||||||||    
T  2579173 ttggctaagagtgtggtgtctctcttgctcgtgtggttgttctagcctcgatgtgcacggt-ccccgagctcccctcatgacccaacagtgatatcagag 2579075  T
Q  101 ccccggttcgacgaagggtgcgaccgaggc 130  Q
     |||||||||||||||||| ||||||||||    
T  2579074 tcccggttcgacgaagggtacgaccgaggc 2579045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 5 - 180
Target Start/End: Original strand, 26544147 - 26544321
Alignment:
Q  5 gtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagcccc 104  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||| ||||| |  |||||||| ||| |||   ||| |||||| |||||| ||||||||    
T  26544147 gtaagagtgtgatgtctctcttgcttgtgcgattgttctagcctcaatgtgaagagtcccccgagcttccccagtgacccaacactggtattagagcccc 26544246  T
Q  105 ggttcgacgaagggtgcgaccgaggccgccggttagttgcgcagaaagcagcaacgacggtacaagcagcaagtgg 180  Q
    ||||||| |||||||||||||||||| ||||| || ||||| ||||||| ||||||  ||||||| ||||||||||    
T  26544247 ggttcgatgaagggtgcgaccgaggcagccgg-tatttgcgtagaaagccgcaacgctggtacaaacagcaagtgg 26544321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 32741273 - 32741361
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacag 89  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | |||||||    
T  32741273 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcctctcataacccaacag 32741361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 16455001 - 16455088
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaaca 88  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  16455001 ttgggtaagagtgtggcgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgagctcccctcataatccaaca 16455088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 29519014 - 29519101
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaaca 88  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||    
T  29519014 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcctctcataacccaaca 29519101  T

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Target: chr6; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 35210298 - 35210423
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagag 100  Q
    ||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||| | |||||||   ||| ||||||||||||||| ||    
T  35210298 ttgggtaagagtgtggtgtttcttttgcttgtgcggttgctctagcctcgatgtggacggtcccctg-gctcccccagtgacccaacagtggtatcaaag 35210396  T
Q  101 ccccggttcgacgaagggtgcgaccga 127  Q
    || |||||||||||||||| |||||||    
T  35210397 cctcggttcgacgaagggtacgaccga 35210423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 2578507 - 2578420
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaaca 88  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  || |||||||||| ||||||    
T  2578507 ttgggtaagagtgtggtgtctcttttgcttgtgcggttgttctagcctcgatgtggacggtccccctagcccccctcatgacccaaca 2578420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 205 - 320
Target Start/End: Original strand, 16107943 - 16108057
Alignment:
Q  205 aagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttgagggggagcacgatgaattgatggactcacac 304  Q
    |||||||||||||| ||||| | ||||||||||||||| ||  || | |||||||||||||| |||||| |||||||| |||||||||||||||||||||    
T  16107943 aagcagtgtcggtctgtttgcgaagaaaccagcaacggcgatgcaag-aaagtaagagcttccgcttgaaggggagcatgatgaattgatggactcacac 16108041  T
Q  305 ttgagggggagtgttg 320  Q
    ||||||||||||||||    
T  16108042 ttgagggggagtgttg 16108057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 3409754 - 3409819
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtccccc 66  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3409754 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtccccc 3409819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 12071755 - 12071626
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagag 100  Q
    |||||||||||||||| ||||||||  |||||| ||||||||||||||||||||| |||||||||   ||||||||||||| | ||||||||||||||||    
T  12071755 ttgggtaagagtgtggcgtctctctcacttgtgtggttgttctagcctcgatgtgaacggtcccctaagctcccctcatgacctaacagtggtatcagag 12071656  T
Q  101 ccccggttcgacgaagggtgcgaccgaggc 130  Q
     |||| ||||| |||| || ||||| ||||    
T  12071655 tcccgattcgatgaagagtacgaccaaggc 12071626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 2843649 - 2843736
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaaca 88  Q
    ||||||||||||||||| ||||||||||||| | ||||||||||||||||||||||||||||||||   |||||||||||||||||||    
T  2843649 ttgggtaagagtgtggtatctctcttgcttgagtggttgttctagcctcgatgtggacggtccccctaactcccctcatgatccaaca 2843736  T

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Target: chr6; HSP #20
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 11 - 188
Target Start/End: Original strand, 3409405 - 3409567
Alignment:
Q  11 gtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcg 110  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||   |||| |           ||| |||| |||||||||||||||||||||||    
T  3409405 gtgtggtgtctctcttgcttatgcggttgttctagcctcgatgtggac---ccccag-----------tgacccaatagtggtatcagagccccggttcg 3409490  T
Q  111 acgaagggtgcgaccgaggccgccggttagttgcgcagaaagcagcaacgacggtacaagcagcaagtggctccttgt 188  Q
    ||||||  |  ||||||||| ||||||  |||||| | |||||||||||| ||||||||| |||||||||||||||||    
T  3409491 acgaagtatatgaccgaggcagccggtc-gttgcgtaaaaagcagcaacggcggtacaagtagcaagtggctccttgt 3409567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 1846842 - 1846929
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacag 89  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||| |||||||    
T  1846842 ttggataagagtgtggtgtctcttttgcttgtgcggttgttctagcctcgatgtggacggtcccccgagcttccc-catgacccaacag 1846929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 35 - 119
Target Start/End: Original strand, 2975033 - 2975117
Alignment:
Q  35 ggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggt 119  Q
    ||||||||||||||||||||||  |||||| |||||||| ||||||||||||||||| ||||||||||||||||||| |||||||    
T  2975033 ggttgttctagcctcgatgtggcaggtcccacgcgctcctctcatgatccaacagtgatatcagagccccggttcgaagaagggt 2975117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 3409353 - 3409407
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtg 55  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3409353 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtg 3409407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 12085098 - 12084965
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagag 100  Q
    |||||||||||||||| ||||||||  |||||| ||||||||||||||||||| | |||||| ||   ||||||||||||| || |||||||||||||||    
T  12085098 ttgggtaagagtgtggcgtctctctcacttgtgtggttgttctagcctcgatgcgaacggtctcctaagctcccctcatga-cccacagtggtatcagag 12085000  T
Q  101 ccccggttcgacgaagggtgcgaccgaggccgccg 135  Q
     ||||||| || |||| || |||| ||||| ||||    
T  12084999 tcccggtttgatgaagagtacgactgaggcagccg 12084965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 5832091 - 5832007
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaa 86  Q
    |||||||| ||||||||||||||||| |||||| |||||||||||||||||||| |||||||||| | ||||||||||||| ||||    
T  5832091 ttgggtaaaagtgtggtgtctctcttacttgtgtggttgttctagcctcgatgtagacggtccccag-gctcccctcatgacccaa 5832007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 14748402 - 14748332
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccc 75  Q
    |||||||||||||||||    |||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  14748402 ttgggtaagagtgtggt----ctcttgcttgtgtggttgttctagcctcgatgtggacggtcccccgcgctcccc 14748332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 2378223 - 2378286
Alignment:
Q  4 ggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccg 67  Q
    ||||||| |||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  2378223 ggtaagaatgtggtgtctctcttgcttgagtggttgttctagcctcgatgtggacggtcccccg 2378286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 3415555 - 3415629
Alignment:
Q  4 ggtaagagtgtggtgtctctcttgcttgtgcggttgt--tctagcctcgatgtggacggtcccccgcgctcccct 76  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||  ||||||||    
T  3415555 ggtaagagtgtggtgtctctcttgcttgtgcggttgttctctagcctcgatgtggaaggtcccccaagctcccct 3415629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 10074055 - 10073887
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctc-atgatccaacagtggtatcaga 99  Q
    |||||||| |||||||||||||||| |||| |  ||||||||||||||||| ||||||||| ||||   ||  |||| |||| |||||| ||||||||||    
T  10074055 ttgggtaaaagtgtggtgtctctctcgcttatttggttgttctagcctcgacgtggacggt-cccctaactatcctcaatgacccaacaatggtatcaga 10073957  T
Q  100 gccccggttcgacgaagggtgcgaccgaggccgccggttag-ttgcgcagaaagcagcaacgacggtacaa 169  Q
     ||||||||| ||||| ||| |||||||||| ||||||  | ||||| |||||| |||||| |||||||||    
T  10073956 tccccggttcaacgaaaggtacgaccgaggcagccggtccgtttgcgtagaaagtagcaac-acggtacaa 10073887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 27 - 160
Target Start/End: Original strand, 31714788 - 31714922
Alignment:
Q  27 gcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctc-atgatccaacagtggtatcagagccccggttcgacgaagggtgcgacc 125  Q
    ||||||| ||||| |||||||||||||||||||||| |||   |||||||| |||| ||||| |||| || |||| ||||||| |||||||||| |||||    
T  31714788 gcttgtgtggttgctctagcctcgatgtggacggtctcccagactcccctcaatgacccaactgtggaattagagtcccggtttgacgaagggtacgacc 31714887  T
Q  126 gaggccgccggttagttgcgcagaaagcagcaacg 160  Q
    |||||  | |||   ||| ||||||||||||||||    
T  31714888 gaggcaactggtgttttgtgcagaaagcagcaacg 31714922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 3058320 - 3058385
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtccccc 66  Q
    ||||||||||||||||||||||||||||||||  ||| |||||| ||||||||||||| |||||||    
T  3058320 ttgggtaagagtgtggtgtctctcttgcttgtagggtggttctaacctcgatgtggaccgtccccc 3058385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 209 - 320
Target Start/End: Complemental strand, 2579765 - 2579653
Alignment:
Q  209 agtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttga-gggggagcacgatgaattgatggactcacacttg 307  Q
    |||| |||||| |||| |||||||||| |||| |||| |||  ||||||||||||||  |||||| |||||| || ||||||| || |||||||||||||    
T  2579765 agtgacggtccatttgcggagaaaccaacaacagagatacaaacaaagtaagagctttcgcttgaagggggaccatgatgaatagacggactcacacttg 2579666  T
Q  308 agggggagtgttg 320  Q
    |||| ||||||||    
T  2579665 agggagagtgttg 2579653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 10073680 - 10073593
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaaca 88  Q
    |||||||||||||||||||||||||  || ||| |||||||||||| ||||||||||||||||  |  ||||||||| ||| ||||||    
T  10073680 ttgggtaagagtgtggtgtctctctcactagtgtggttgttctagcatcgatgtggacggtccttcaggctcccctcgtgacccaaca 10073593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 254 - 320
Target Start/End: Complemental strand, 10074219 - 10074152
Alignment:
Q  254 aagtaagagcttctgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttg 320  Q
    ||||||||||||| |||||| ||||||||| ||||||||||| ||||| |||||||||||||||||||    
T  10074219 aagtaagagcttccgcttgaagggggagcatgatgaattgatagactcgcacttgagggggagtgttg 10074152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 64
Target Start/End: Original strand, 16108150 - 16108208
Alignment:
Q  6 taagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtccc 64  Q
    |||| ||||||||||||||||||||||| ||||||| || |||||||||||||||||||    
T  16108150 taagggtgtggtgtctctcttgcttgtggggttgttataacctcgatgtggacggtccc 16108208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 205 - 320
Target Start/End: Complemental strand, 2579387 - 2579269
Alignment:
Q  205 aagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttgag-ggggagcac---gatgaattgatggactc 300  Q
    |||| ||||||||| |||||  |||||||||||||||| || |||  ||| ||||||||||| ||||||  ||||||||    ||||||| |||||||||    
T  2579387 aagcggtgtcggtctgtttgcagagaaaccagcaacggcgatacaaacaa-gtaagagcttccgcttgaaaggggagcaacatgatgaatagatggactc 2579289  T
Q  301 acacttgagggggagtgttg 320  Q
    ||||||||||||||||||||    
T  2579288 acacttgagggggagtgttg 2579269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 593773 - 593694
Alignment:
Q  1 ttgggtaagagtgtggtgtctctct--tgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctca 78  Q
    |||||||| |||||||| |||||||  | ||||| |||||||||||| |||||||| |||||||||||| ||||||||||    
T  593773 ttgggtaatagtgtggtatctctctcttacttgtacggttgttctaggctcgatgttgacggtcccccgagctcccctca 593694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 317
Target Start/End: Original strand, 33605879 - 33605969
Alignment:
Q  226 ggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttgagggggagcacgatgaattgatggactcacacttgagggggagtg 317  Q
    ||||||||||||||||  || ||| |||| ||||||||||| ||| || |  | ||||| ||||||||||||||||||||||||||||||||    
T  33605879 ggagaaaccagcaacgacgatacaagcaa-gtaagagcttccgctcgaagaagggcacggtgaattgatggactcacacttgagggggagtg 33605969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 6999860 - 6999799
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtc 62  Q
    |||| ||||||||||| ||||||||||||  || ||||||||||| ||||||||||||||||    
T  6999860 ttggataagagtgtggcgtctctcttgctaatgtggttgttctagtctcgatgtggacggtc 6999799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 33605740 - 33605906
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctca-tgatccaacagtggtatcaga 99  Q
    ||||||||| ||||||| ||||||| |||| |||      ||||||||| ||||||   ||| |||  |||||||||| |||  |||||||||||| |||    
T  33605740 ttgggtaagtgtgtggtatctctctcgcttatgc------tctagcctcaatgtgggttgtcaccctggctcccctcaatgacacaacagtggtattaga 33605833  T
Q  100 gccccggttcgacgaagggtgcgaccgaggccgccggttagttgcgcagaaagcagcaacgacggtacaagca 172  Q
    |||| | | |||||||||||  ||||||||| |||| |  |||||| ||||| ||||||||||| ||||||||    
T  33605834 gccctgctacgacgaagggtaggaccgaggcagccgatccgttgcggagaaaccagcaacgacgatacaagca 33605906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 320
Target Start/End: Complemental strand, 10073884 - 10073775
Alignment:
Q  210 gtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttga-gggggagcacgatgaattgatggactcacacttga 308  Q
    ||||||||||||| | |||||||||| |||| | || ||| | ||||||||| |||| |||||| |||||| || ||||||||||||||||||||||| |    
T  10073884 gtgtcggtccgtt-gcggagaaaccatcaacagtgatacaag-aaagtaagaccttccgcttgaagggggaacatgatgaattgatggactcacacttaa 10073787  T
Q  309 gggggagtgttg 320  Q
    | ||| ||||||    
T  10073786 gagggggtgttg 10073775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 16454838 - 16454901
Alignment:
Q  258 aagagcttctgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttg 320  Q
    ||||||||| |||||| ||||||||| | |||||||||||| ||||| ||||||||||||||||    
T  16454838 aagagcttccgcttgaagggggagcatgctgaattgatggagtcacagttgagggggagtgttg 16454901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 315
Target Start/End: Complemental strand, 12092261 - 12092201
Alignment:
Q  258 aagagcttctgcttgaggggg---agcacgatgaattgatggactcacacttgagggggag 315  Q
    ||||||||| ||| |||||||   |||| ||||||||||||||||||||||||||||||||    
T  12092261 aagagcttccgctagaggggggtgagcatgatgaattgatggactcacacttgagggggag 12092201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 188
Target Start/End: Complemental strand, 14789441 - 14789403
Alignment:
Q  150 aagcagcaacgacggtacaagcagcaagtggctccttgt 188  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  14789441 aagcagcaacgacggtaaaagcagcaagtggctccttgt 14789403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 1950245 - 1950200
Alignment:
Q  5 gtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcg 50  Q
    |||||||||||  ||||||||| |||||||||||||||||||||||    
T  1950245 gtaagagtgtgacgtctctcttacttgtgcggttgttctagcctcg 1950200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 205 - 320
Target Start/End: Complemental strand, 2578730 - 2578606
Alignment:
Q  205 aagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaaga------gcttctgcttga----gggggagcacgatgaattgat 294  Q
    |||||||||||||| ||||| |||||||||| |||||| || ||| || ||||||||      ||||| ||||||    || | |||| ||||||| |||    
T  2578730 aagcagtgtcggtctgtttgcggagaaaccaacaacggcgatacaagc-aagtaagagcttccgcttccgcttgaaaagggagcagcatgatgaatagat 2578632  T
Q  295 ggactcacacttgagggggagtgttg 320  Q
    ||||||||||||||||||||||||||    
T  2578631 ggactcacacttgagggggagtgttg 2578606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 275 - 320
Target Start/End: Original strand, 3409611 - 3409656
Alignment:
Q  275 ggggagcacgatgaattgatggactcacacttgagggggagtgttg 320  Q
    |||||||||| | || ||||||||||||||||||||||||||||||    
T  3409611 ggggagcacgttaaagtgatggactcacacttgagggggagtgttg 3409656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 126
Target Start/End: Complemental strand, 12092542 - 12092421
Alignment:
Q  5 gtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagcccc 104  Q
    |||||| ||||||||||||||  |||||| ||||| ||| |||| |||||||  |||||||   || |||||| ||  |||||  |||||| |||||| |    
T  12092542 gtaagactgtggtgtctctctcacttgtgaggttgctctggcctggatgtgggtggtccccttggcccccctcgtgtcccaactctggtattagagccgc 12092443  T
Q  105 ggttcgacgaagggtgcgaccg 126  Q
    |||| |||||||||| ||||||    
T  12092442 ggtttgacgaagggttcgaccg 12092421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 1127454 - 1127518
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccc 65  Q
    |||||||||||||||| ||||||||| ||| || ||||| |||| |||||||||||  |||||||    
T  1127454 ttgggtaagagtgtggcgtctctcttacttatgtggttgctctaacctcgatgtgggtggtcccc 1127518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 320
Target Start/End: Complemental strand, 10074560 - 10074524
Alignment:
Q  284 gatgaattgatggactcacacttgagggggagtgttg 320  Q
    ||||||||||||||||||||||| |||||||||||||    
T  10074560 gatgaattgatggactcacacttaagggggagtgttg 10074524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 320
Target Start/End: Original strand, 35210449 - 35210485
Alignment:
Q  284 gatgaattgatggactcacacttgagggggagtgttg 320  Q
    |||| ||||||||||||||||||||||||||||||||    
T  35210449 gatggattgatggactcacacttgagggggagtgttg 35210485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 315
Target Start/End: Original strand, 8481888 - 8481917
Alignment:
Q  286 tgaattgatggactcacacttgagggggag 315  Q
    ||||||||||||||||||||||||||||||    
T  8481888 tgaattgatggactcacacttgagggggag 8481917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 17135133 - 17135068
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtccccc 66  Q
    |||| ||||||||||  | |||| | ||||||||||||||||  |||| |||||||||||||||||    
T  17135133 ttggataagagtgtgacggctctttcgcttgtgcggttgttccggccttgatgtggacggtccccc 17135068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 320
Target Start/End: Original strand, 2378059 - 2378122
Alignment:
Q  257 taagagcttctgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttg 320  Q
    |||||||||| |||||| ||||||||| |||||||  ||||||||||| ||| ||||||||||||    
T  2378059 taagagcttccgcttgaagggggagcatgatgaataaatggactcacatttg-gggggagtgttg 2378122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 10902494 - 10902438
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtgga 57  Q
    |||||||||||||||||||||||||  |||||  |||||||||  ||| ||||||||    
T  10902494 ttgggtaagagtgtggtgtctctctcacttgtatggttgttctgacctagatgtgga 10902438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 156; Significance: 7e-83; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 37533428 - 37533253
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagag 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  37533428 ttgggtaagagtgtggtgtctcttttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcgtgacccaacagtggtatcagag 37533329  T
Q  101 ccccggttcgacgaagggtgcgaccgaggccgccggttagttgcgcagaaagcagcaacgacggtacaagcagcaa 176  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  37533328 ccccggttcgacgaagggtgcgaccgaggccgccggtcagttgcgtagaaagcagcaacgacggtacaagcagcaa 37533253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 37533074 - 37532897
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagag 100  Q
    |||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| || ||| ||||||||||||||||||    
T  37533074 ttgggtaa-agtgtggtgtctctcttgcttgtgcgcttgttctaacctcgatgtggacggtcccccgcgctcccatcgtgacccaacagtggtatcagag 37532976  T
Q  101 ccccggttcgacgaagggtgcgaccgaggccgccggttagttgcgcagaaagcagcaacgacggtacaagcagcaagtg 179  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  37532975 ccccggttcgacgaagggtgcgaccgaggccgccggtcagttgcgcagaaagcagcaacgactgtacaagcagcaagtg 37532897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 4 - 197
Target Start/End: Complemental strand, 22567100 - 22566905
Alignment:
Q  4 ggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcat-gatccaacagtggtatcagagcc 102  Q
    |||||||||||||||||||||||||||||| ||||||||  ||||||||||||| ||||||||| ||||||||||  || |||| |||||||||||||||    
T  22567100 ggtaagagtgtggtgtctctcttgcttgtggggttgttcgggcctcgatgtggatggtcccccgagctcccctcaacgacccaatagtggtatcagagcc 22567001  T
Q  103 cc-ggttcgacgaagggtgcgaccgaggccgccggttagttgcgcagaaagcagcaacgacggtacaagcagcaagtggctccttgtacggcaacg 197  Q
    || ||| ||||||||||| ||||| ||||| ||||||||||| ||||||| |||||| ||||||||||| ||||||||||||||||| | ||||||    
T  22567000 cccggtccgacgaagggtacgaccaaggccaccggttagttgtgcagaaaacagcaaagacggtacaagaagcaagtggctccttgtgcagcaacg 22566905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 192 - 320
Target Start/End: Original strand, 7553891 - 7554019
Alignment:
Q  192 gcaacggcagtgcaagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttgagggggagcacgatgaatt 291  Q
    |||| ||| ||||||||||||| ||||||||||  |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  7553891 gcaatggcggtgcaagcagtgttggtccgtttgcagagaaaccagcaacggcgacacatgcaaagtaagagcttccgcttgagggggagcacgatgaatt 7553990  T
Q  292 gatggactcacacttgagggggagtgttg 320  Q
    |||||||||||||||||||||||||||||    
T  7553991 gatggactcacacttgagggggagtgttg 7554019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 1085680 - 1085544
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagag 100  Q
    |||||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||| ||    
T  1085680 ttgggtaagagtgtggcgtctctcttacttgtgtggttgttctagcctcgatgtggacggtccccctggctcccctcatgacccaacagtggtatcatag 1085581  T
Q  101 ccccggttcgacgaagggtgcgaccgaggccgccggt 137  Q
    ||||||||||| |||||||  ||||||||| ||||||    
T  1085580 ccccggttcgatgaagggtatgaccgaggcagccggt 1085544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 47129189 - 47129360
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagag 100  Q
    ||||||| |||||||||||||||||  |  ||| ||||||||||||||| |||| |||||||||| | ||||||||||||||||||||||||||||||||    
T  47129189 ttgggtaggagtgtggtgtctctctcacaagtgtggttgttctagcctcaatgtagacggtcccc-gagctcccctcatgatccaacagtggtatcagag 47129287  T
Q  101 ccccggttcgacgaagggtgcgaccgaggccgccggttag-ttgcgcagaaagcagcaacgacggtacaagcag 173  Q
    |||| |||||| ||| ||||||| |||||| ||||||  | ||||| |||||||| ||||| |||| |||||||    
T  47129288 cccc-gttcgatgaatggtgcgatcgaggcagccggtccgtttgcgtagaaagcaacaacggcggtgcaagcag 47129360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 37167875 - 37167949
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccc 75  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  37167875 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcctccgcgctcccc 37167949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 37532815 - 37532729
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaac 87  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  37532815 ttgggtaagagtgtggtgtctctctagcttgtgctgttgttctagcctcgatgtggacggtcctccgcgctcccctcgtgatccaac 37532729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 8128505 - 8128336
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctca-tgatccaacagtggtatcaga 99  Q
    |||| ||||||||||||||| |||| |||| || |||||||||||| |||||||| || ||||||||| ||||||||| | | ||||||||||||||| |    
T  8128505 ttggttaagagtgtggtgtcactctcgcttatgtggttgttctagcatcgatgtgaacagtcccccgcactcccctcactaacccaacagtggtatcaaa 8128406  T
Q  100 gccccggttcgacgaagggtgcgaccgaggccgccggttagttgcgcagaaagcagcaacgacggtacaa 169  Q
    |||| ||||||||||||||| ||| ||| || |||| |  |||||| ||||| ||||||||||| |||||    
T  8128405 gccctggttcgacgaagggtacgatcgaagcagccgttccgttgcggagaaaccagcaacgacgatacaa 8128336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 45433335 - 45433502
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctc-atgatccaacagtggtatcaga 99  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||  ||||||||| |||| ||  ||   ||||||||    
T  45433335 ttgggtaagagtgtggtgtctctcttgcttgtggggttgttctagcctcgatgtggtcggtccccctggctcccctctatgaccctgca---gtatcaga 45433431  T
Q  100 gccccggttcgacgaagggtgcgaccgaggccgccggttag-ttgcgcagaaagcagcaacgacggtacaag 170  Q
    | ||||||||||| |||||| |||||||||| || |||  | ||||||| |||||||||||| |||| ||||    
T  45433432 g-cccggttcgacaaagggtacgaccgaggcagctggtccgtttgcgcataaagcagcaacggcggttcaag 45433502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 45754809 - 45754976
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagag 100  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||||||| | ||||| | || |||||||  |||| ||||||||||||||||||    
T  45754809 ttgggtaagagtgtggtgtctctcttgcttgtgtggttgttcaagcctcgatgtag-cggtcactcgagctcccccaatgacccaacagtggtatcagag 45754907  T
Q  101 ccccggttcgacgaagggtgcgaccgaggccgccggttag-ttgcgcagaaagcagcaacgacggtacaa 169  Q
    |||| ||||| ||||||||  ||||||||| ||| ||  | |||  ||||||||||||| ||||||||||    
T  45754908 cccc-gttcggcgaagggtatgaccgaggcagccagtccgtttgtacagaaagcagcaaagacggtacaa 45754976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 47129463 - 47129550
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacag 89  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||| |||||||    
T  47129463 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgatctagcctcgatgtggacggt-ccccgagctcccctcatgacccaacag 47129550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 3 - 173
Target Start/End: Complemental strand, 28300630 - 28300470
Alignment:
Q  3 gggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagcc 102  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||      ||     |||| |||||| ||||||||||| |    
T  28300630 gggtaagagtgtggtgtctctcttgcttgtgtggttattctagcctcgatgtggacgatccc-----ttc----aatgaaccaacactggtatcagag-c 28300541  T
Q  103 ccggttcgacgaagggtgcgaccgaggccgccggttagttgcgcagaaagcagcaacgacggtacaagcag 173  Q
    | | ||||||||||||| |||||||||| | ||||   |||||||||||||||||||||||||||||||||    
T  28300540 ctgattcgacgaagggtacgaccgaggcagtcggtccattgcgcagaaagcagcaacgacggtacaagcag 28300470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 40094838 - 40094664
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccg-------cgctcccctcatgatccaacagtggt 93  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||||||||||| ||||||||||       | | |||| |  || | |||||||||    
T  40094838 ttgggtaagagtgtggcgtctctcttgcttgtgaggttgttctagcctcgatgtggtcggtcccccgagtccccccccccccccccgacctaacagtggt 40094739  T
Q  94 atcagagccccggttcgacgaagggtgcgaccgaggccgccggttag-ttgcgcagaaagcagcaacgacggtaca 168  Q
    ||||||| ||| |||||||||||||| |||||||||| ||||||  | |||||||||||| ||||||| |||||||    
T  40094738 atcagag-ccctgttcgacgaagggtacgaccgaggcagccggtccgtttgcgcagaaagtagcaacggcggtaca 40094664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 8 - 172
Target Start/End: Original strand, 30245256 - 30245421
Alignment:
Q  8 agagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggt 107  Q
    ||||||||||||||||||  |||||| |||||||| |||||| ||||||||||||||||  |||||||| |||| |||||||||||||||||||||| |     
T  30245256 agagtgtggtgtctctctcacttgtgtggttgttcaagcctcaatgtggacggtcccccatgctccccttatgacccaacagtggtatcagagcccc-gc 30245354  T
Q  108 tcgac-gaagggtgcgaccgaggccgccggttag-ttgcgcagaaagcagcaacgacggtacaagca 172  Q
    |||||  |||||| ||| |||||| |||| |  | ||||||||| |||||||||| || ||||||||    
T  30245355 tcgacaaaagggtacgatcgaggcagccgatccgtttgcgcagagagcagcaacggcgatacaagca 30245421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 23441 - 23368
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctccc 74  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||    
T  23441 ttgggtaagagtgtggtgtctctcttgcatgtgcggttgttctagcctcgatttggacggtcccccgagctccc 23368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 8 - 105
Target Start/End: Original strand, 30253671 - 30253768
Alignment:
Q  8 agagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccg 105  Q
    ||||||||||||||||||  |||||| |||||||| ||||||||||||||| |||||||  ||||||||||||| |||||| ||||||||||||||||    
T  30253671 agagtgtggtgtctctctcacttgtgtggttgttcaagcctcgatgtggactgtcccccaggctcccctcatgacccaacaatggtatcagagccccg 30253768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 11845285 - 11845359
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccc 75  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||    
T  11845285 ttggataagagtgtggtgtctctcttgcttgtgcagttgttctagcctcgatgtagacggtcccccgtgctcccc 11845359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 8 - 105
Target Start/End: Original strand, 30244453 - 30244550
Alignment:
Q  8 agagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccg 105  Q
    ||||||||||||||||||  |||||| |||||||| ||||||||||||||||||||| |  ||||||||||||| |||||| |||||||| |||||||    
T  30244453 agagtgtggtgtctctctcacttgtgtggttgttcaagcctcgatgtggacggtccctcaggctcccctcatgacccaacaatggtatcaaagccccg 30244550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 205 - 320
Target Start/End: Complemental strand, 48243356 - 48243241
Alignment:
Q  205 aagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttga-gggggagcacgatgaattgatggactcaca 303  Q
    ||||||||||||| |||| | ||||||||||||||||| || ||| |||| |||||| ||||  ||||| ||||||||| |||||||||||||| |||||    
T  48243356 aagcagtgtcggttcgttggcggagaaaccagcaacggcgatacaagcaa-gtaagaacttccacttgaagggggagcatgatgaattgatggattcaca 48243258  T
Q  304 cttgagggggagtgttg 320  Q
    |||||||||||||||||    
T  48243257 cttgagggggagtgttg 48243241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 34218098 - 34218011
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaaca 88  Q
    ||||||||||||||||||||||||| ||||||  |||||||| |||||||||||||||||||| ||| ||||||| ||| ||||||||    
T  34218098 ttgggtaagagtgtggtgtctctctcgcttgtatggttgttcaagcctcgatgtggacggtcctccgagctccccccataatccaaca 34218011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 30032661 - 30032735
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccc 75  Q
    |||||||||||||||   |||||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  30032661 ttgggtaagagtgtgacatctctcttgcttgtgcggttgttctatcctcgatgtggacggtcccccgagctcccc 30032735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 93 - 186
Target Start/End: Original strand, 14681323 - 14681415
Alignment:
Q  93 tatcagagccccggttcgacgaagggtgcgaccgaggccgccggttagttgcgcagaaagcagcaacgacggtacaagcagcaagtggctcctt 186  Q
    |||||||||||||||| || |||||||||||||||||| ||||||| |||||||||||||| |||||  |||||||| |||||| |||||||||    
T  14681323 tatcagagccccggttggatgaagggtgcgaccgaggcagccggtt-gttgcgcagaaagccgcaacagcggtacaaacagcaaatggctcctt 14681415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 247 - 320
Target Start/End: Original strand, 14681431 - 14681506
Alignment:
Q  247 acatgcaaagtaagagcttctgcttga--gggggagcacgatgaattgatggactcacacttgagggggagtgttg 320  Q
    |||||||||||||||||||| ||||||  ||||||||| ||||||| |||||||||||||||||||||||||||||    
T  14681431 acatgcaaagtaagagcttccgcttgaaggggggagcatgatgaatagatggactcacacttgagggggagtgttg 14681506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 30244364 - 30244439
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccct 76  Q
    |||||||||||||||||||||||||  |||||| |||||||| |||||||||||||| ||||||||| ||||||||    
T  30244364 ttgggtaagagtgtggtgtctctctcacttgtgtggttgttcaagcctcgatgtggatggtcccccgagctcccct 30244439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 9901737 - 9901799
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcc 63  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||    
T  9901737 ttgggtaagagtgtggtgtctctcttgctagtgcggttgttctagcctcggtgtggactgtcc 9901799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 6054654 - 6054725
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctc 72  Q
    |||||||||||||||||||||||| | |||||  |||||||||||||| |||||||||||||||||| ||||    
T  6054654 ttgggtaagagtgtggtgtctctcctacttgtatggttgttctagccttgatgtggacggtcccccgagctc 6054725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 30245171 - 30245255
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacag 89  Q
    |||||||||||||||||||||||||||    || |||||||| |||||||||||||| ||||||||| ||||||||| ||| |||||||    
T  30245171 ttgggtaagagtgtggtgtctctcttg----tgtggttgttcaagcctcgatgtggatggtcccccgagctcccctcgtgacccaacag 30245255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 24177532 - 24177594
Alignment:
Q  4 ggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtccccc 66  Q
    ||||||||||||| |||||||||||||||||||||||  ||||||||| ||||||||||||||    
T  24177532 ggtaagagtgtggcgtctctcttgcttgtgcggttgtcttagcctcgacgtggacggtccccc 24177594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 45434730 - 45434803
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctccc 74  Q
    ||||||||||||||| |||||||||| ||||||  ||||||||||||||||||||  ||||||||| |||||||    
T  45434730 ttgggtaagagtgtgatgtctctcttacttgtggagttgttctagcctcgatgtgatcggtccccctcgctccc 45434803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 193 - 289
Target Start/End: Original strand, 47129343 - 47129439
Alignment:
Q  193 caacggcagtgcaagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttg-agggggagcacgatgaa 289  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||||   | ||| || ||||||||||||| ||||| |||||||||| ||||||    
T  47129343 caacggcggtgcaagcagtgtcggtccgtttgcggagaaaccagcaacgacaatacaagc-aagtaagagcttccgcttgaagggggagcatgatgaa 47129439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 30253586 - 30253667
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaa 86  Q
    |||||||||||||||||||||||||||    || |||||||| |||||||||||||| ||||||||| ||||||||| ||| ||||    
T  30253586 ttgggtaagagtgtggtgtctctcttg----tgtggttgttcaagcctcgatgtggatggtcccccgagctcccctcgtgacccaa 30253667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 36939797 - 36939741
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtgga 57  Q
    |||||||| |||||||||| |||||||||| ||||||||||||||||||||||||||    
T  36939797 ttgggtaaaagtgtggtgtttctcttgcttatgcggttgttctagcctcgatgtgga 36939741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 226 - 320
Target Start/End: Original strand, 37345819 - 37345913
Alignment:
Q  226 ggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttg 320  Q
    ||||||| ||||||||| || ||| |||| |||| ||||||  ||||| |||||||||||||||||||||| |||||||||||| |||||||||||    
T  37345819 ggagaaagcagcaacggcgatacaagcaa-gtaaaagcttccacttgacgggggagcacgatgaattgatgaactcacacttgaaggggagtgttg 37345913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 19122825 - 19122879
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtg 55  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||    
T  19122825 ttgggtaagagtgtggtgtctatcttgcttgtgtggttgttctagtctcgatgtg 19122879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 7517674 - 7517751
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctca 78  Q
    ||||||||||||||||||||| |||  |||||| ||||||||||||||||||||||  |||||||   ||||||||||    
T  7517674 ttgggtaagagtgtggtgtctgtctcacttgtgtggttgttctagcctcgatgtgggtggtccccttggctcccctca 7517751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 4 - 172
Target Start/End: Original strand, 37345678 - 37345846
Alignment:
Q  4 ggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccc-tcatgatccaacagtggtatcagagcc 102  Q
    ||||||||| ||  ||||||||  ||||| |||||| ||| |||| ||||||   ||||| ||| ||||||| || ||| ||||||||||||||||||||    
T  37345678 ggtaagagtctgacgtctctctcacttgtacggttgctct-gcctggatgtgagtggtccgccgggctccccctcttgacccaacagtggtatcagagcc 37345776  T
Q  103 ccggttcgacgaagggtgcgaccgaggccgccggttagttgcgcagaaagcagcaacgacggtacaagca 172  Q
    |||||||   ||||||| | | |||||| |||| |  |||||| |||||||||||||| || ||||||||    
T  37345777 ccggttcagtgaagggtacaatcgaggcagccgatccgttgcggagaaagcagcaacggcgatacaagca 37345846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 41854728 - 41854793
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtccccc 66  Q
    |||||||||||||||  |||| |||| |||||||||||||||||||||| |||| |||||||||||    
T  41854728 ttgggtaagagtgtgacgtctttcttacttgtgcggttgttctagcctcaatgtagacggtccccc 41854793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 140 - 188
Target Start/End: Original strand, 45697752 - 45697800
Alignment:
Q  140 gttgcgcagaaagcagcaacgacggtacaagcagcaagtggctccttgt 188  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  45697752 gttgcgcagaaagcagcaacggcggtacaagaagcaagtggctccttgt 45697800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 118365 - 118299
Alignment:
Q  1 ttgggtaagagtgtggtgtct--ctcttgcttgtgcggttgttctagcctcgatgtggacggtcccc 65  Q
    |||||||||||||||| ||||  |||||||||||| |||||||||||| | ||||||||||||||||    
T  118365 ttgggtaagagtgtggcgtctatctcttgcttgtgtggttgttctagctttgatgtggacggtcccc 118299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 320
Target Start/End: Complemental strand, 1085526 - 1085413
Alignment:
Q  209 agtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttg-agggggagcacgatgaattgatgg--actcacact 305  Q
    |||||||||||||||| ||||||||||||||| | || ||| || |||||||||||||  |||| ||||| |||| ||||||  |||||  |||||||||    
T  1085526 agtgtcggtccgtttgcggagaaaccagcaacagcgatacaagc-aagtaagagcttccccttgaaggggtagcatgatgaaaagatggacactcacact 1085428  T
Q  306 tgagggggagtgttg 320  Q
    ||| |||||||||||    
T  1085427 tgaaggggagtgttg 1085413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 28300317 - 28300255
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcc 63  Q
    |||||||||||||||| |||||||||||  ||| ||||||||  |||||||||||||||||||    
T  28300317 ttgggtaagagtgtggcgtctctcttgcaagtgtggttgttcgggcctcgatgtggacggtcc 28300255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 254 - 320
Target Start/End: Complemental strand, 40094621 - 40094555
Alignment:
Q  254 aagtaagagcttctgcttgagggggagcacgatgaattgatggactcacacttgagggggagtgttg 320  Q
    ||||||||||||| ||||||||| ||||  ||||||| ||||||||||||||| ||| |||||||||    
T  40094621 aagtaagagcttccgcttgagggagagcgtgatgaatagatggactcacactttaggaggagtgttg 40094555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 254 - 320
Target Start/End: Original strand, 45697841 - 45697907
Alignment:
Q  254 aagtaagagcttctgcttgagggggagcacgatgaattgatggactcacacttgagggggagtgttg 320  Q
    ||||||||||||| |||||| |||||||| ||||||| |||  |||||||||||||| |||||||||    
T  45697841 aagtaagagcttccgcttgaaggggagcatgatgaatagataaactcacacttgaggaggagtgttg 45697907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 29157659 - 29157720
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtc 62  Q
    ||||||||||||||||||||||||||||| |||  |||| ||||| || |||||||||||||    
T  29157659 ttgggtaagagtgtggtgtctctcttgctcgtgtagttgctctagtcttgatgtggacggtc 29157720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 313
Target Start/End: Original strand, 45434514 - 45434625
Alignment:
Q  204 caagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaaga--gcttctgcttga-gggggagcacgatgaattgatggactc 300  Q
    |||| |||||||||| ||||| |||||||| |||||||| || ||| |||| |||| |  ||||| |||||| ||||||||| |||||||||| ||||||    
T  45434514 caagtagtgtcggtctgtttgcggagaaactagcaacggcgatacaagcaa-gtaaaaaagcttccgcttgaagggggagcatgatgaattgaaggactc 45434612  T
Q  301 acacttgaggggg 313  Q
    ||||||| |||||    
T  45434613 acacttggggggg 45434625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 254 - 320
Target Start/End: Original strand, 30244628 - 30244695
Alignment:
Q  254 aagtaagagcttctgcttgagggggagcacgatgaatt-gatggactcacacttgagggggagtgttg 320  Q
    ||||||||||||| |||| | |||||||| ||||||   |||||||||||||||||||||||||||||    
T  30244628 aagtaagagcttccgcttcaaggggagcatgatgaaaaagatggactcacacttgagggggagtgttg 30244695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 36623054 - 36623153
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagag 100  Q
    ||||||| |||| ||||| ||||||| |||||| | |||||||  ||| |||||||||||||||  | ||||||||||||| |||||  |||||| ||||    
T  36623054 ttgggtaggagtatggtgcctctcttacttgtgtgattgttctgaccttgatgtggacggtcccttgagctcccctcatgacccaactctggtatgagag 36623153  T

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Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 107 - 169
Target Start/End: Complemental strand, 48243419 - 48243356
Alignment:
Q  107 ttcgacgaagggtgcgaccgaggccgccggttagtt-gcgcagaaagcagcaacgacggtacaa 169  Q
    ||||||||||||| |||||||||| ||||||  ||| |||||||||||||||||| ||||||||    
T  48243419 ttcgacgaagggtacgaccgaggcagccggtccgtttgcgcagaaagcagcaacggcggtacaa 48243356  T

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Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 4719359 - 4719305
Alignment:
Q  2 tgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtgg 56  Q
    |||||||||||||||| | ||||||| ||||||||||| |||||||||| |||||    
T  4719359 tgggtaagagtgtggtatttctcttgtttgtgcggttgctctagcctcgttgtgg 4719305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 5825621 - 5825562
Alignment:
Q  28 cttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaaca 88  Q
    ||||||||||||||||||||| ||||||||||||| |||  ||| ||||||||| ||||||    
T  5825621 cttgtgcggttgttctagccttgatgtggacggtctcccaagct-ccctcatgacccaaca 5825562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 320
Target Start/End: Original strand, 30245385 - 30245488
Alignment:
Q  217 tccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttgagggggagcacgatg-aattgatggactcacacttgagggggag 315  Q
    |||||||| | ||| | ||||||||| || ||| |||| ||||||||||| ||||||||||||||| |||| ||  || |||| |||||||||||||||     
T  30245385 tccgtttgcgcagagagcagcaacggcgatacaagcaa-gtaagagcttccgcttgagggggagcatgatgaaaaagacggacacacacttgagggggac 30245483  T
Q  316 tgttg 320  Q
    |||||    
T  30245484 tgttg 30245488  T

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Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 320
Target Start/End: Original strand, 30245024 - 30245071
Alignment:
Q  273 agggggagcacgatgaattgatggactcacacttgagggggagtgttg 320  Q
    |||||||||| ||||| | ||||||||| |||||||||||||||||||    
T  30245024 agggggagcatgatgattagatggactcgcacttgagggggagtgttg 30245071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 45755021 - 45755072
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgat 52  Q
    |||||||| ||||||||||||| ||| |||||| |||||||| |||||||||    
T  45755021 ttgggtaaaagtgtggtgtctcccttacttgtgtggttgttcaagcctcgat 45755072  T

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Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 20599417 - 20599471
Alignment:
Q  8 agagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtc 62  Q
    |||||||||||||||||||||||||  ||||||| || ||| |||||| ||||||    
T  20599417 agagtgtggtgtctctcttgcttgtatggttgttttaaccttgatgtgaacggtc 20599471  T

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Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 318
Target Start/End: Original strand, 10342192 - 10342253
Alignment:
Q  258 aagagcttctgcttgaggggg-agcacgatgaattgatggactcacacttgagggggagtgt 318  Q
    |||||||||  |||||||||| |||| |||||||||  ||||||| ||||||||||||||||    
T  10342192 aagagcttccacttgagggggcagcatgatgaattggcggactcatacttgagggggagtgt 10342253  T

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Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 24838765 - 24838724
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttc 42  Q
    |||||||||||||||  |||||||||||||||| ||||||||    
T  24838765 ttgggtaagagtgtgacgtctctcttgcttgtgtggttgttc 24838724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 317
Target Start/End: Complemental strand, 28300476 - 28300365
Alignment:
Q  204 caagcagtgtcggtccgtttg-tggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttga--gggggagcacgatgaattgatggactc 300  Q
    |||||||||||||||| |||| |||||||||||||||||  |  ||| |||| |     ||||| ||||||  || |||||| ||||||| |||||||||    
T  28300476 caagcagtgtcggtccatttgctggagaaaccagcaacgacgttacaagcaagg-----gcttccgcttgaaaggaggagcatgatgaatagatggactc 28300382  T
Q  301 acacttgagggggagtg 317  Q
    ||||||||| |||||||    
T  28300381 acacttgagagggagtg 28300365  T

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Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 7554119 - 7554151
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtg 33  Q
    ||||||||||||||||||||||||| |||||||    
T  7554119 ttgggtaagagtgtggtgtctctctcgcttgtg 7554151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 276 - 320
Target Start/End: Original strand, 30244220 - 30244264
Alignment:
Q  276 gggagcacgatgaattgatggactcacacttgagggggagtgttg 320  Q
    ||||||| ||||| | |||| ||||||||||||||||||||||||    
T  30244220 gggagcatgatgactagatgaactcacacttgagggggagtgttg 30244264  T

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Target: chr3 (Bit Score: 124; Significance: 9e-64; HSPs: 75)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 22304019 - 22303820
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcg-ctcccctcatgatccaacagtggtatcaga 99  Q
    |||| |||||||||||||||||||||||||| | |||||||||||||||||||||||  |||||||  | ||||||   ||| | |||||||||||||||    
T  22304019 ttggataagagtgtggtgtctctcttgcttgagtggttgttctagcctcgatgtggattgtcccccaaggctcccccagtgacctaacagtggtatcaga 22303920  T
Q  100 gccccggttcgacgaagggtgcgaccgaggccgccggttagttgcgcagaaagcagcaacgacggtacaagcagcaagtggctccttgtacggcaacggc 199  Q
    ||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||    
T  22303919 gccccggttcgacgaagggtgcgacagaggccgccggtcagttgcgcagaaagcagcaacgacggtacaagcagcaagtggcttcttgtgcagcaacggc 22303820  T

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Target: chr3; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 16 - 188
Target Start/End: Original strand, 22304302 - 22304476
Alignment:
Q  16 gtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgc-tcccctca-tgatccaacagtggtatcagagccccggttcgacg 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  || |||||||| ||| |||||||||||||||||||||||||||||||    
T  22304302 gtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtccccctagcttcccctcactgacccaacagtggtatcagagccccggttcgacg 22304401  T
Q  114 aagggtgcgaccgaggccgccggttagttgcgcagaaagc-agcaacgacggtacaagcagcaagtggctccttgt 188  Q
    |||||| |||||||||| ||||| | |||||||||||||| ||||||  | ||||||| || ||||||||||||||    
T  22304402 aagggtacgaccgaggcagccgg-tcgttgcgcagaaagcaagcaacagctgtacaagtagtaagtggctccttgt 22304476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 53577458 - 53577616
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctca-tgatccaacagtggtatcaga 99  Q
    ||||||||||||||||||||||||||||  ||| |||||||||||||||| |||||| |||||||||  |||| ||   ||| |||||||||||||||||    
T  53577458 ttgggtaagagtgtggtgtctctcttgcaagtgtggttgttctagcctcggtgtggatggtcccccgaactcctctttgtgacccaacagtggtatcaga 53577557  T
Q  100 gccccggttcgacgaagggtgcgaccgaggccgccggttagttgcgcagaaagcagcaa 158  Q
    | |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  53577558 gtcccggttcgacgaagggtacgaccgaggccgccggtcagttgcgcagaaagcagcaa 53577616  T

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Target: chr3; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 15772948 - 15773119
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagag 100  Q
    |||| |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||      |||||||||||| ||||||||||||||||||    
T  15772948 ttggataagagtgtggtgtctctcttgcttgtgtggttgttctaacctcgatgtggacggtccttttgactcccctcatgacccaacagtggtatcagag 15773047  T
Q  101 ccccggttcgacgaagggtgcgaccgaggccgccggttagttgcgcagaaagcagcaacgacggtacaagca 172  Q
    ||| | ||||||||||||| ||| ||||||||||||| ||||  |||||||||||||||  || ||||||||    
T  15773048 ccctgattcgacgaagggtacgatcgaggccgccggtcagttatgcagaaagcagcaacagcgatacaagca 15773119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 29644966 - 29644811
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagag 100  Q
    |||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||  ||||||||| ||| ||| |  |||||||| ||    
T  29644966 ttgggtaagagtgtggcgtctctcttgcttatgcggttgttttagcctcgatgtggacggtcccccaagctcccctcgtgacccagctttggtatcaaag 29644867  T
Q  101 ccc---cggttcgacgaagggtgcgaccgaggccgccggttagttgcgcagaaagc 153  Q
    |||   |||||||||||||||| ||||||||||||||| | | |||||||||||||    
T  29644866 ccccgtcggttcgacgaagggtacgaccgaggccgccgttcaattgcgcagaaagc 29644811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 37991041 - 37990881
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgct-cccctcatgatccaacagtggtatcaga 99  Q
    |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||| |  ||| |||||||||| ||||||||||||||||     
T  37991041 ttgggtaagagtgtggtgtctctcttgcttatgtggttgttctagcctcgatgtggacggtccctcaggctccccctcatgacccaacagtggtatcagg 37990942  T
Q  100 gccccggttcgacgaagggtgcgaccgaggccgccggttag-ttgcgcagaaagcagcaacg 160  Q
    |||||  |||||| |||||| ||| |||||| ||||||| | ||||||||||| ||||||||    
T  37990941 gcccc-attcgacaaagggtacgatcgaggcagccggttcgtttgcgcagaaaccagcaacg 37990881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 6 - 169
Target Start/End: Complemental strand, 3135513 - 3135350
Alignment:
Q  6 taagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccg 105  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||   ||| |||||||| ||||| ||||||||||||||||     
T  3135513 taagagtgtggtgtctcttttgcttgtgcggttgttctagcctcgatgtggacggtccccctgactctcctcatgacccaactgtggtatcagagcccc- 3135415  T
Q  106 gttcgacgaagggtgcgaccgaggccgccggttag-ttgcgcagaaagcagcaacgacggtacaa 169  Q
     |||||| |||||| ||| |||||| |  |||  | || ||||||||||||||||| ||||||||    
T  3135414 attcgacaaagggtacgaacgaggcagttggtccgtttacgcagaaagcagcaacggcggtacaa 3135350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 33803316 - 33803143
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctc-atgatccaacagtggtatcaga 99  Q
    |||||||||||||||| ||||| ||  |||||| ||||||||||||||||||||||||||||||||   ||||| || |||| |||||||||||||||||    
T  33803316 ttgggtaagagtgtggcgtctccctctcttgtgtggttgttctagcctcgatgtggacggtcccccaaactcccatcaatga-ccaacagtggtatcaga 33803218  T
Q  100 gccccggttcgacgaagggtgcgaccgaggccgccggttag-ttgcgcagaaagcagcaacgacggtacaagcag 173  Q
    ||| || ||||||||||||| |||| ||||| ||| ||  | ||||||| |||||||||||||| ||||||||||    
T  33803217 gcctcgattcgacgaagggtacgactgaggcagccagtccgtttgcgcataaagcagcaacgacagtacaagcag 33803143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 54018262 - 54018093
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagag 100  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||||||| |||||||||   ||||     ||| | |||||||| |||||||    
T  54018262 ttgggtaagagtgtggtgtctctcatgcttgtgtggttgttctagcctcgatgtgggcggtccccctgactcctacggtgaccaaacagtggcatcagag 54018163  T
Q  101 ccccggttcgacgaagggtgcgaccgaggccgccggttag-ttgcgcagaaagcagcaacgacggtacaa 169  Q
    | ||||||| ||||||||||||| |||||| ||||||  | |||||||||||||||||| | ||||||||    
T  54018162 ctccggttcaacgaagggtgcgatcgaggcagccggtccgtttgcgcagaaagcagcaatggcggtacaa 54018093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 5 - 169
Target Start/End: Complemental strand, 32462960 - 32462795
Alignment:
Q  5 gtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctca-tgatccaacagtggtatcagagccc 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||  |||||||| | || || |||||||| ||||||| ||    
T  32462960 gtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtgtacggtcttccaagctccccttagtgttctaacagtggcatcagag-cc 32462862  T
Q  104 cggttcgacgaagggtgcgaccgaggccgccggttag-ttgcgcagaaagcagcaacgacggtacaa 169  Q
      |||||||||||||| ||||||  || | ||||| | |||||||||||||||||||| ||||||||    
T  32462861 tagttcgacgaagggtacgaccggagcagtcggttcgtttgcgcagaaagcagcaacggcggtacaa 32462795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 43346855 - 43346754
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccg-cgctcccctcatgatccaacagtggtatcaga 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||  ||||||||||||  | |||||||||||||||    
T  43346855 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctctatgtggacggtcctccgaagctcccctcatgtcctaacagtggtatcaga 43346756  T
Q  100 gc 101  Q
    ||    
T  43346755 gc 43346754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 38 - 188
Target Start/End: Complemental strand, 41360164 - 41360014
Alignment:
Q  38 tgttctagcctcgatgtggacggtcccccgcgctcccctcatgatcc-aacagtggtatcagagccccggttcgacgaagggtgcgaccgaggccgccgg 136  Q
    |||||||||||||||||||||||| ||||| |||||||||    ||| ||||||||||||||||| |||||||||||||| || ||||||  || |||||    
T  41360164 tgttctagcctcgatgtggacggttccccgggctcccctcgctgtcctaacagtggtatcagagcgccggttcgacgaagagtacgaccg--gcagccgg 41360067  T
Q  137 ttagttgcgcagaaagcagcaacgacggtacaagc--agcaagtggctccttgt 188  Q
    |  |||| |||||||||||||||||||||||||||  |||||||||||||||||    
T  41360066 tc-gttgtgcagaaagcagcaacgacggtacaagcagagcaagtggctccttgt 41360014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 35 - 161
Target Start/End: Original strand, 9239941 - 9240067
Alignment:
Q  35 ggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtgcgaccgaggccgcc 134  Q
    |||| |||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||| || |||||| || |||||| ||| |||||| | |    
T  9239941 ggtttttctagcctcgatgtggacggtcccccaagctcccctcatgatccaacagtagtatcagaacctcggttcaacaaagggtacgatcgaggcagtc 9240040  T
Q  135 ggttagttgcgcagaaagcagcaacga 161  Q
     ||  ||||||||||||||||||||||    
T  9240041 agtccgttgcgcagaaagcagcaacga 9240067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 32589797 - 32589884
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaaca 88  Q
    ||||||||||||| | ||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||| |||||||||||||    
T  32589797 ttgggtaagagtgcgatgtctctcttgcttgtgtggttgttctaggctcgatgtggacggtccccctcgctcccttcatgatccaaca 32589884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 214 - 320
Target Start/End: Complemental strand, 37990908 - 37990803
Alignment:
Q  214 cggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttgagggggagcacgatgaattgatggactcacacttgaggggg 313  Q
    |||| |||||| | ||||||||||||||| || ||||||||||||| |||||| ||||||||||| ||| |||||||||||||||||||| |||||||||    
T  37990908 cggttcgtttgcgcagaaaccagcaacggcgatacatgcaaagtaaaagcttccgcttgaggggg-gcatgatgaattgatggactcacagttgaggggg 37990810  T
Q  314 agtgttg 320  Q
    |||||||    
T  37990809 agtgttg 37990803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 37990703 - 37990626
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctca 78  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| |||| |||||    
T  37990703 ttgggtaagagtgtggtgtctctcttgcttgtgtgattgttctagcctcgatgtggacggtcccccgagctctcctca 37990626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 54017880 - 54017780
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagag 100  Q
    |||||||||||||||||||||||||| |||||| |||||||||||| ||||||||| |||||||||  |||||||   ||| ||||||||||||||||||    
T  54017880 ttgggtaagagtgtggtgtctctcttacttgtgtggttgttctagcttcgatgtgggcggtccccctggctcccccagtgacccaacagtggtatcagag 54017781  T
Q  101 c 101  Q
    |    
T  54017780 c 54017780  T

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Target: chr3; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 81
Target Start/End: Original strand, 25755489 - 25755568
Alignment:
Q  2 tgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatga 81  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||    
T  25755489 tgggtaaaagtgtggcgtctctcttgcttgtgcggttgttctagcctcgatgtggatggtcccccgaactcccctcatga 25755568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 42342154 - 42342092
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcc 63  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  42342154 ttgggtaagagtgtggcgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcc 42342092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 52634769 - 52634886
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagag 100  Q
    |||||||||||||||  ||||||||||||||||| ||||||||||||| ||||| ||| |||||||| |||||||   ||| ||||||||| ||||||||    
T  52634769 ttgggtaagagtgtgacgtctctcttgcttgtgcagttgttctagccttgatgtagactgtcccccgagctcccccagtgacccaacagtgatatcagag 52634868  T
Q  101 ccccggttcgacgaagggt 119  Q
    ||||  |||||||||||||    
T  52634869 cccc-cttcgacgaagggt 52634886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 22304663 - 22304728
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtccccc 66  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  22304663 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagtctcgatgtggacagtccccc 22304728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 42342452 - 42342360
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctca-tgatccaacagtgg 92  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||||||||||  |||||||| | ||| ||||||||||    
T  42342452 ttgggtaagagtgtgacgtctctcttgcttgtgcggttgttctagcctcaatgtggacggtccccctggctccccttagtgacccaacagtgg 42342360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 41359829 - 41359660
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggt-cccccgcgctcccctcatgatccaacagtggtatcaga 99  Q
    |||||||||| ||||| |||||||| ||||||| |||||||||||||||||||||| |||| |||||| |||||||   ||| |||| |||||||||| |    
T  41359829 ttgggtaagaatgtggcgtctctctcgcttgtgtggttgttctagcctcgatgtgggcggtccccccgagctcccccagtgacccaatagtggtatcata 41359730  T
Q  100 gccccggttcgacgaagggtgcgaccgaggccgccggttagt-tgcgcagaaagcagcaacgacggtacaa 169  Q
    |||||  |||||||||||||  || |||||| ||| ||  || |||||| |||||||||||  ||||||||    
T  41359729 gcccc-attcgacgaagggtaagatcgaggcagccagtccgtctgcgcataaagcagcaacagcggtacaa 41359660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 12114626 - 12114561
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtccccc 66  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||    
T  12114626 ttgggtaagagtgtggtgtctctcttacttgtgcggttgttctagccacgatgtggtcggtccccc 12114561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 35946616 - 35946681
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtccccc 66  Q
    |||||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  35946616 ttgggtaaaagtgtggtgtctctcttgcttgtgcaattgttctagcctcgatgtggacggtccccc 35946681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 41359555 - 41359490
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtccccc 66  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  41359555 ttgggtaagagtgtggcgtctcttttgcttgtgcggttgttctagcctcaatgtggacggtccccc 41359490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 313
Target Start/End: Original strand, 8328259 - 8328368
Alignment:
Q  204 caagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttga-gggggagcacgatgaattgatggactcac 302  Q
    |||||||||||| || ||||| |||||||||| |||||| || ||| |||| ||||||||||| |||||| |||||||  ||||| ||||||||||||||    
T  8328259 caagcagtgtcgatcagtttgcggagaaaccaacaacggtgatacaagcaa-gtaagagcttccgcttgaagggggagatcgatgcattgatggactcac 8328357  T
Q  303 acttgaggggg 313  Q
    |||||||||||    
T  8328358 acttgaggggg 8328368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 251 - 320
Target Start/End: Original strand, 22304495 - 22304565
Alignment:
Q  251 gcaaagtaagagcttctgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttg 320  Q
    |||||||||||||||| |||||| ||||||||| ||||||| |||||||||||||||||||||||||||||    
T  22304495 gcaaagtaagagcttccgcttgaagggggagcatgatgaatagatggactcacacttgagggggagtgttg 22304565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 25739489 - 25739424
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtccccc 66  Q
    |||||||||||||||  |||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  25739489 ttgggtaagagtgtgacgtctctctagcttgtgcggtagttctagcctcgatgtggacggtccccc 25739424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 31190103 - 31190167
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccc 65  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||| |||||    
T  31190103 ttgggtaagagtgtggtgtctctcttgcttgtcgggttgttctagcctcgatttggacgctcccc 31190167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 78
Target Start/End: Original strand, 8328374 - 8328441
Alignment:
Q  11 gtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctca 78  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||  |||||||||    
T  8328374 gtgtggtgtctctcttgcttgtggggttgttttagcctcgatgtggacggtcccacgaactcccctca 8328441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 29644645 - 29644558
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaaca 88  Q
    |||||||||||||||| ||||||||||||| |||||||||| |||| |||||||||| ||||||||   |||||||| ||| ||||||    
T  29644645 ttgggtaagagtgtggcgtctctcttgcttatgcggttgttttagcttcgatgtggatggtcccccaaactcccctcgtgacccaaca 29644558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 254 - 320
Target Start/End: Complemental strand, 32462790 - 32462723
Alignment:
Q  254 aagtaagagcttctgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttg 320  Q
    ||||||||||||  |||||| ||||||||| |||||||||||||||||||||||||||||||||||||    
T  32462790 aagtaagagctttcgcttgaagggggagcatgatgaattgatggactcacacttgagggggagtgttg 32462723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 15773286 - 15773375
Alignment:
Q  1 ttgggtaagagtgtggtgtctct--cttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaaca 88  Q
    ||||||||||||||| |||||||  |||||||||| |||||||||| |||||||||||||| ||| ||   |||||||||||||||||||    
T  15773286 ttgggtaagagtgtgatgtctcttgcttgcttgtgtggttgttctaacctcgatgtggacgatcctcctaactcccctcatgatccaaca 15773375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 51 - 144
Target Start/End: Original strand, 53577627 - 53577721
Alignment:
Q  51 atgtggacggtcccccgcgctcccctca-tgatccaacagtggtatcagagccccggttcgacgaagggtgcgaccgaggccgccggttagttgc 144  Q
    |||||||||||||||||  |||| ||   ||| |||||||||||||||||| |||||||||| ||||||| ||||||||||||||||| ||||||    
T  53577627 atgtggacggtcccccgaactcctctttgtgacccaacagtggtatcagagtcccggttcgaagaagggtacgaccgaggccgccggtcagttgc 53577721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 210 - 316
Target Start/End: Complemental strand, 54018090 - 54017984
Alignment:
Q  210 gtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttgagggggagcacgatgaattgatggactcacacttgag 309  Q
    ||||| ||||||||| |||||||||| |||| | || ||| ||||   ||||||||| |||||||||||| || ||||||  ||||||||||||||||||    
T  54018090 gtgtcagtccgtttgcggagaaaccaacaacagtgatacaagcaagtaaagagcttccgcttgagggggaacatgatgaaaagatggactcacacttgag 54017991  T
Q  310 ggggagt 316  Q
    |||||||    
T  54017990 ggggagt 54017984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 22303723 - 22303662
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtc 62  Q
    ||||||||||||||||||| |||||| |||||||| |||||||||||||||||| |||||||    
T  22303723 ttgggtaagagtgtggtgtttctcttacttgtgcgattgttctagcctcgatgtagacggtc 22303662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 39935015 - 39934963
Alignment:
Q  5 gtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtgga 57  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  39935015 gtaagagtgtgatgtctctcttgcttgtgtggttgttctagcctcgatgtgga 39934963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 208 - 319
Target Start/End: Complemental strand, 21832614 - 21832505
Alignment:
Q  208 cagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttgagggggagcacgatgaattgatggactcacacttg 307  Q
    ||||||||||||||| | ||||||||||||||||  || ||| |||| ||| |||||||   |||| |||||||| ||||||| ||||||||||||||||    
T  21832614 cagtgtcggtccgtt-gcggagaaaccagcaacgacgatacaagcaa-gtatgagcttccatttgatggggagcatgatgaatagatggactcacacttg 21832517  T
Q  308 agggggagtgtt 319  Q
    ||| ||||||||    
T  21832516 aggcggagtgtt 21832505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 204 - 273
Target Start/End: Original strand, 8328154 - 8328222
Alignment:
Q  204 caagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttga 273  Q
    ||||||||||||||||||||| ||||||||||||||||| || ||| || ||||||||||||| ||||||    
T  8328154 caagcagtgtcggtccgtttgcggagaaaccagcaacggcgatacaagc-aagtaagagcttccgcttga 8328222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 45395717 - 45395656
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtc 62  Q
    |||||||||||||||||||||||||  |||||| ||||| ||||||||||||||||| ||||    
T  45395717 ttgggtaagagtgtggtgtctctctcacttgtggggttgctctagcctcgatgtggagggtc 45395656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 50612511 - 50612446
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtccccc 66  Q
    ||||||||||||||| ||||||||||||||| | |||||||| | |||||| ||||||||||||||    
T  50612511 ttgggtaagagtgtgatgtctctcttgcttgagtggttgttccatcctcgacgtggacggtccccc 50612446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 192 - 319
Target Start/End: Complemental strand, 3135364 - 3135237
Alignment:
Q  192 gcaacggcagtgcaagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagag-cttctgcttgagggggagcacgatgaat 290  Q
    |||||||| || ||| ||||||||||| ||||| ||||||||||||||||  || |||  |||   ||| | |||| ||| |||||||||||||||||||    
T  3135364 gcaacggcggtacaaacagtgtcggtctgtttgcggagaaaccagcaacgacgatacaaacaagtaaagtggcttccgctagagggggagcacgatgaat 3135265  T
Q  291 tgatggactcacacttgagggggagtgtt 319  Q
    |||| ||||||||||||| || |||||||    
T  3135264 tgat-gactcacacttgatggtgagtgtt 3135237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 32462622 - 32462536
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaaca 88  Q
    |||| ||||||||||| |||||||||| ||||| | ||||| |||||||||||| ||||| |||||   |||||||||||||||||||    
T  32462622 ttggataagagtgtggggtctctcttgtttgtgggattgttttagcctcgatgtagacgg-cccccaaactcccctcatgatccaaca 32462536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 274 - 320
Target Start/End: Original strand, 15773140 - 15773186
Alignment:
Q  274 gggggagcacgatgaattgatggactcacacttgagggggagtgttg 320  Q
    ||||||||||||| || ||||||||||||||||||||||||||||||    
T  15773140 gggggagcacgataaagtgatggactcacacttgagggggagtgttg 15773186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 21832407 - 21832344
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtccccc 66  Q
    |||||||||||||  | |||||||||||||||  |||||||||||||||||||||||| |||||||    
T  21832407 ttgggtaagagtg--gcgtctctcttgcttgtctggttgttctagcctcgatgtggacagtccccc 21832344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 278 - 320
Target Start/End: Complemental strand, 42342296 - 42342254
Alignment:
Q  278 gagcacgatgaattgatggactcacacttgagggggagtgttg 320  Q
    ||||| |||||||||||||||||||||||||||||||||||||    
T  42342296 gagcatgatgaattgatggactcacacttgagggggagtgttg 42342254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 39914346 - 39914399
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgt 54  Q
    |||| ||||||||||||||||||||  ||| |||||||||||||||||||||||    
T  39914346 ttggataagagtgtggtgtctctctcacttatgcggttgttctagcctcgatgt 39914399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 45901811 - 45901872
Alignment:
Q  4 ggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccc 65  Q
    ||||||||||||||||||||||| ||| |  |||||||||| | ||||||||||||||||||    
T  45901811 ggtaagagtgtggtgtctctcttacttatagggttgttctaacttcgatgtggacggtcccc 45901872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 8327998 - 8328115
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcg----gttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatc 96  Q
    |||||||||||||||||||||||||  |  ||| |    |||||||||||||||||||||||| ||||| | |||  |||  ||||||||| ||||||||    
T  8327998 ttgggtaagagtgtggtgtctctctcacaagtgagtgcagttgttctagcctcgatgtggacgctcccctgagct--cctagtgatccaactgtggtatc 8328095  T
Q  97 agagccccggttcgacgaagg 117  Q
    |||| ||||||||||| ||||    
T  8328096 agag-cccggttcgacaaagg 8328115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 1634345 - 1634302
Alignment:
Q  35 ggttgttctagcctcgatgtggacggtcccccgcgctcccctca 78  Q
    ||||||||||||||||||||||||||||||||  ||||||||||    
T  1634345 ggttgttctagcctcgatgtggacggtccccctagctcccctca 1634302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 234 - 320
Target Start/End: Original strand, 11661858 - 11661945
Alignment:
Q  234 cagcaacggagacacatgcaaagtaaga-gcttctgcttgagggggagcacgatgaattgatggactcacacttgagggggagtgttg 320  Q
    ||||||||| || ||||||||||||| | ||||| |||  ||| |||||||||| || ||||||||||||||||  ||||||||||||    
T  11661858 cagcaacggcgatacatgcaaagtaaaaagcttccgctctaggaggagcacgataaagtgatggactcacacttttgggggagtgttg 11661945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 39389164 - 39389219
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtgg 56  Q
    ||||||||||||||||||||||| |||| |||||  |||||||||||| |||||||    
T  39389164 ttgggtaagagtgtggtgtctcttttgcctgtgcaattgttctagccttgatgtgg 39389219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 44160606 - 44160546
Alignment:
Q  4 ggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtccccc 66  Q
    ||||||| ||||| ||||||||| ||||  || ||||||||||||||||||||||||||||||    
T  44160606 ggtaagaatgtggcgtctctcttacttg--cgattgttctagcctcgatgtggacggtccccc 44160546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 3135098 - 3135033
Alignment:
Q  69 gctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtgcgaccgaggccgccg 135  Q
    ||||||||||||| |||| |||||||||||||| || ||||||| |||||| |||||||||| ||||    
T  3135098 gctcccctcatgacccaatagtggtatcagagcacc-gttcgacaaagggtacgaccgaggcagccg 3135033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 39
Target Start/End: Complemental strand, 3135133 - 3135099
Alignment:
Q  5 gtaagagtgtggtgtctctcttgcttgtgcggttg 39  Q
    |||||||||||||||||||||||||||||||||||    
T  3135133 gtaagagtgtggtgtctctcttgcttgtgcggttg 3135099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 320
Target Start/End: Original strand, 22304208 - 22304242
Alignment:
Q  286 tgaattgatggactcacacttgagggggagtgttg 320  Q
    |||||||||||||||||||||||||||||||||||    
T  22304208 tgaattgatggactcacacttgagggggagtgttg 22304242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 74
Target Start/End: Complemental strand, 43978922 - 43978856
Alignment:
Q  8 agagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctccc 74  Q
    ||||||||| ||||||||  |||||| | |||||||| ||||||||||||| |||||||| ||||||    
T  43978922 agagtgtggcgtctctctcacttgtgtgtttgttctaacctcgatgtggactgtcccccgagctccc 43978856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 320
Target Start/End: Original strand, 52634889 - 52634931
Alignment:
Q  278 gagcacgatgaattgatggactcacacttgagggggagtgttg 320  Q
    ||||||||||||||||| |||||||||||||||| ||||||||    
T  52634889 gagcacgatgaattgattgactcacacttgagggagagtgttg 52634931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 54017612 - 54017522
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctc-atgatccaacagt 90  Q
    ||||||||||||||||||||||| || ||| || | ||||| | |||||||||||| |||||||||   |||||||| |||| ||||||||    
T  54017612 ttgggtaagagtgtggtgtctctattacttatgtgattgttttggcctcgatgtggtcggtccccctaactcccctctatgacccaacagt 54017522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 53118039 - 53117974
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtccccc 66  Q
    |||||||||||||| ||||||||||  |  ||| |||||||||||| |||||||| ||||||||||    
T  53118039 ttgggtaagagtgtagtgtctctctcacaagtgtggttgttctagcatcgatgtgaacggtccccc 53117974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 188
Target Start/End: Original strand, 4823507 - 4823563
Alignment:
Q  133 ccggttagttgcgcagaaagca-gcaacgacggtacaagcagcaagtggctccttgt 188  Q
    ||||| |||||||||||||||| ||||||  |||||||||| |||||||||||||||    
T  4823507 ccggtcagttgcgcagaaagcaagcaacggtggtacaagcaacaagtggctccttgt 4823563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 11662046 - 11662117
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcc 73  Q
    ||||||||||||| |||||||||||   ||||| ||||||||||||||||||||| || ||||| || |||||    
T  11662046 ttgggtaagagtgaggtgtctctctca-ttgtgtggttgttctagcctcgatgtgaacagtcccacgagctcc 11662117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 49336750 - 49336694
Alignment:
Q  2 tgggtaagagtgtggtgtctctc-ttgcttgtgcggttgttctagcctcgatgtgga 57  Q
    ||||||||||||||||||||||| ||  |||||||||||||||| |||| |||||||    
T  49336750 tgggtaagagtgtggtgtctctctttttttgtgcggttgttctatcctcaatgtgga 49336694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 4823749 - 4823796
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcct 48  Q
    ||||||||||||||||||||| | |||||| ||||| |||||||||||    
T  4823749 ttgggtaagagtgtggtgtcttttttgcttatgcggatgttctagcct 4823796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 254 - 320
Target Start/End: Original strand, 9240079 - 9240146
Alignment:
Q  254 aagtaagagcttctgcttgagggg-gagcacgatgaattgatggactcacacttgagggggagtgttg 320  Q
    ||||||||| ||| |||||||||| |||||  | |||| ||||||||||||||||||| |||||||||    
T  9240079 aagtaagagtttccgcttgaggggagagcataacgaatggatggactcacacttgaggaggagtgttg 9240146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 67
Target Start/End: Original strand, 37726625 - 37726656
Alignment:
Q  36 gttgttctagcctcgatgtggacggtcccccg 67  Q
    ||||||||||||||||||||||||||||||||    
T  37726625 gttgttctagcctcgatgtggacggtcccccg 37726656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 320
Target Start/End: Original strand, 4823606 - 4823651
Alignment:
Q  275 ggggagcacgatgaattgatggactcacacttgagggggagtgttg 320  Q
    |||||||||| | || |||||||||||||||||| |||||||||||    
T  4823606 ggggagcacgttaaagtgatggactcacacttgaaggggagtgttg 4823651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 103
Target Start/End: Complemental strand, 50329606 - 50329573
Alignment:
Q  70 ctcccctcatgatccaacagtggtatcagagccc 103  Q
    ||||||||||||||||||||| ||||||||||||    
T  50329606 ctcccctcatgatccaacagtagtatcagagccc 50329573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 9240248 - 9240300
Alignment:
Q  6 taagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggac 58  Q
    ||||| ||||||||||||||   | |||||||| |||||||||||||||||||    
T  9240248 taagaatgtggtgtctctctcaatagtgcggttattctagcctcgatgtggac 9240300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 33175706 - 33175646
Alignment:
Q  18 gtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctca 78  Q
    ||||||||  |||||| | |||||||||||||| ||||| | |||||||| ||||||||||    
T  33175706 gtctctctcacttgtgtgattgttctagcctcggtgtgggcagtcccccgagctcccctca 33175646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 192 - 260
Target Start/End: Complemental strand, 33803161 - 33803094
Alignment:
Q  192 gcaacggcagtgcaagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaag 260  Q
    |||||| |||| ||||||||||||||||| ||| |||||| |||||||||| || ||| |||| |||||    
T  33803161 gcaacgacagtacaagcagtgtcggtccg-ttgcggagaagccagcaacggcgatacaagcaaggtaag 33803094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 39336034 - 39336002
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtg 33  Q
    ||||||||||||||||||||||||| |||||||    
T  39336034 ttgggtaagagtgtggtgtctctctcgcttgtg 39336002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 119
Target Start/End: Complemental strand, 39336276 - 39336177
Alignment:
Q  20 ctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcg-ctcccctcatgatccaacagtggtatcagagccccggttcgacgaaggg 118  Q
    |||||| ||| ||| ||||| ||| |||| |||||||| ||||||||  | |||||||| |||||||||| ||||||||||| |  ||||| ||||||||    
T  39336276 ctctctcgctcgtgtggttgctct-gcctggatgtggatggtcccccttggctcccctcgtgatccaacattggtatcagagtcgtggttcaacgaaggg 39336178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 69 - 97
Target Start/End: Original strand, 47157662 - 47157690
Alignment:
Q  69 gctcccctcatgatccaacagtggtatca 97  Q
    |||||||||||||||||||||||||||||    
T  47157662 gctcccctcatgatccaacagtggtatca 47157690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 121; Significance: 6e-62; HSPs: 81)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 1014309 - 1014122
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacgg-tcccccgcgctcccctcatgatccaacagtggtatcaga 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || ||||||| |||||||   |||| ||||||||||||||||    
T  1014309 ttgggtaagagtgtggtgtctctcctgcttgtgcggttgttctagcctcgatgtggatggttcccccgagctcccccagtgatacaacagtggtatcaga 1014210  T
Q  100 gccccggttcgacgaagggtgcgaccgaggccgccggttagttgcgcagaaagcagcaacgacggtacaagcagcaagtggctccttgt 188  Q
    |||||||||||||||||||| |||| ||||| ||||| | |||||||||||||| |||||| |||||||||||||||||||||||||||    
T  1014209 gccccggttcgacgaagggtacgactgaggcagccgg-tcgttgcgcagaaagccgcaacggcggtacaagcagcaagtggctccttgt 1014122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 3669781 - 3669967
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagag 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||||||| ||| ||||| ||||||||||||    
T  3669781 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggatggtccccctagctcccctcgtgacccaacggtggtatcagag 3669880  T
Q  101 ccccggttcgacgaagggtgcgaccgaggccgccggttagttgcgcagaaagcagcaacgacggtacaagcagcaagtggctccttgt 188  Q
    ||||  ||| | ||||||| ||| |||||| ||||| | |||||||||||||| ||||| |||||||||||| |||||||||||||||    
T  3669881 ccccccttcaatgaagggtacgatcgaggcagccgg-tcgttgcgcagaaagccgcaacaacggtacaagcaacaagtggctccttgt 3669967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 10 - 188
Target Start/End: Original strand, 9309085 - 9309262
Alignment:
Q  10 agtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttc 109  Q
    ||||||||||||||||  ||  || ||||||||||||||||||||||||||||||||| |||||||   ||| |||| |||||||||||| |||| ||||    
T  9309085 agtgtggtgtctctctcacta-tgtggttgttctagcctcgatgtggacggtcccccgagctcccccagtgacccaaaagtggtatcagaaccccagttc 9309183  T
Q  110 gacgaagggtgcgaccgaggccgccggttagttgcgcagaaagcagcaacgacggtacaagcagcaagtggctccttgt 188  Q
    |||| ||||| ||||||||||||||||| ||||||| |||||||| ||||||||| |||||||||||||||||||||||    
T  9309184 gacggagggtacgaccgaggccgccggtcagttgcgtagaaagcaacaacgacggcacaagcagcaagtggctccttgt 9309262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 34834970 - 34835104
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagag 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | ||||  ||||| ||||  ||| ||||||||||||||||||    
T  34834970 ttgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggatgatcccttgcgct-ccctagtgacccaacagtggtatcagag 34835068  T
Q  101 ccccggttcgacgaagggtgcgaccgaggccgccggt 137  Q
     |||||||||||||||||| |||||||||| ||||||    
T  34835069 -cccggttcgacgaagggtacgaccgaggcagccggt 34835104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 18372058 - 18371921
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacgg-tcccccgcgctcccctcatgatccaacagtggtatcaga 99  Q
    ||||||||||||||||||| ||||| ||||||||||||| ||||||||| ||||| |||| ||||||| ||||||||||||| |||||||||||||||||    
T  18372058 ttgggtaagagtgtggtgtttctctcgcttgtgcggttgctctagcctcaatgtgaacggttcccccgagctcccctcatgacccaacagtggtatcaga 18371959  T
Q  100 gccccggttcgacgaagggtgcgaccgaggccgccggtt 138  Q
    | || |||||||| |||||| |||||||||| |||||||    
T  18371958 g-cctggttcgacaaagggtacgaccgaggcagccggtt 18371921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 147545 - 147718
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtccccc-gcgctcccctcatgatccaacagtggtatcaga 99  Q
    |||||||||||||||| |||||||||||||||||||| |||||||| | |||||||  ||||||||   ||||||| ||||| ||||||||| |||||||    
T  147545 ttgggtaagagtgtggcgtctctcttgcttgtgcggtagttctagcattgatgtgggtggtcccccatagctcccc-catgacccaacagtgatatcaga 147643  T
Q  100 gccccggttcgacgaagggtgcgaccgaggccgccggttag-ttgcgcagaaagcagcaacgacggtacaagcag 173  Q
    ||||||||||||| |||||| ||| |||||| ||| ||  | |||||||||||||||||||  ||||||||||||    
T  147644 gccccggttcgacaaagggtacgatcgaggcagccagtccgtttgcgcagaaagcagcaacagcggtacaagcag 147718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 40518165 - 40518294
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctc-atgatccaacagtggtatcaga 99  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||| |  ||| | |||| ||||||||||    
T  40518165 ttgggtaagagtgtggcgtctctcttgcttgtgtggttgttctagccttgatgtggacggtcccccgagctccccccggtgaccaaacaatggtatcaga 40518264  T
Q  100 gccccggttcgacgaagggtgcgaccgaggc 130  Q
    ||||| |||||||||||||| ||||||||||    
T  40518265 gcccc-gttcgacgaagggtacgaccgaggc 40518294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 7 - 135
Target Start/End: Complemental strand, 18372342 - 18372214
Alignment:
Q  7 aagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacgg-tcccccgcgctcccctcatgatccaacagtggtatcagagccccg 105  Q
    ||||||||||||||||||| ||||||||||||| | ||| |||||||||||||| ||||||| ||||||||||||| |||| ||||||||||||| || |    
T  18372342 aagagtgtggtgtctctctcgcttgtgcggttgctttagtctcgatgtggacggttcccccgagctcccctcatgacccaatagtggtatcagag-cctg 18372244  T
Q  106 gttcgacgaagggtgcgaccgaggccgccg 135  Q
    ||||||| |||||| |||||||||| ||||    
T  18372243 gttcgacaaagggtacgaccgaggcagccg 18372214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 37544554 - 37544391
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagag 100  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| | ||||| | ||||||||||| |||||  || ||||||||    
T  37544554 ttgggtaagagtgtggtgtctttcttacttgtgcggttgttctagcctcgatgtggacgat-ccccgagttcccctcatgacccaactctgatatcagag 37544456  T
Q  101 ccccggttcgacgaagggtgcgaccgaggccgccggttag-ttgcgcagaaagcagcaacgacggt 165  Q
    ||||  |||| |||||| ||||| |||| | ||||||| | ||| ||| |||||||||||||||||    
T  37544455 cccc-cttcgtcgaaggatgcgatcgagacagccggttcgtttgtgcataaagcagcaacgacggt 37544391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 40579333 - 40579258
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccct 76  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  40579333 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggactgtcccccgagctcccct 40579258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 3038354 - 3038217
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctccc-ctca-tgatccaacagtggtatcag 98  Q
    ||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||| |||| ||| ||||||||||||||||    
T  3038354 ttgggtaagagtgtggcatctctcttgcttgtgtggttgttctagcctcgatgtggacggtcctccgagctccctctcagtgacccaacagtggtatcag 3038255  T
Q  99 agccccggttcgacgaagggtgcgaccgaggccgccggt 137  Q
    |||| | ||||||| ||||||  |||| |||| ||||||    
T  3038254 agcctc-gttcgacaaagggtaggaccaaggcagccggt 3038217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 209 - 321
Target Start/End: Complemental strand, 3038202 - 3038091
Alignment:
Q  209 agtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttgagggggagcacgatgaattgatggactcacacttga 308  Q
    |||||||||||||||| ||||||||||||||||| || |||    ||||||||||||| |||||||||||||| |||||||||||||||||||||||| |    
T  3038202 agtgtcggtccgtttgaggagaaaccagcaacggcgatacaaagcaagtaagagcttccgcttgagggggagctcgatgaattgatggactcacacttta 3038103  T
Q  309 gggggagtgttga 321  Q
     ||||||||||||    
T  3038102 -ggggagtgttga 3038091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 5915961 - 5916025
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccc 65  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5915961 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccc 5916025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 9483251 - 9483084
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgat-ccaacagtggtatcaga 99  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| |||   ||||||||||  || |||||| |||  |||||    
T  9483251 ttgggtaagagtgtggtgtctcttttgctcgtgcggttgttctagcctcgatgtggacggttcccatagctcccctcagtatcccaacaatgg--tcaga 9483154  T
Q  100 gccccggttcgacgaagggtgcgaccgaggccgccggttag-ttgcgcagaaagcagcaacgacggtacaa 169  Q
    |||||  || |||||||||| | |||||||| | ||||  | |||||||||||||||||||| ||||||||    
T  9483153 gcccc-tttggacgaagggtacaaccgaggcagtcggtccgtttgcgcagaaagcagcaacggcggtacaa 9483084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 3670154 - 3670214
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggt 61  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3670154 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggt 3670214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 8919208 - 8919042
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagag 100  Q
    |||| |||||||||||||||||| ||||||||| |||||||||||| |||||||||||||||||||  ||| ||||| |||  ||||| |||||||||||    
T  8919208 ttggataagagtgtggtgtctcttttgcttgtgtggttgttctagcttcgatgtggacggtccccc-agcttccctcgtgactcaacaatggtatcagag 8919110  T
Q  101 ccccggttcgacgaagggtgcgaccgaggccgccggttag-ttgcgcagaaagcagcaacgacggtaca 168  Q
     ||| |||| |||||||||  ||||||||  ||||||  | ||| ||| |||| |||||||||||||||    
T  8919109 tccc-gttcaacgaagggtatgaccgaggtagccggtccgattgtgcataaagtagcaacgacggtaca 8919042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 30441179 - 30441266
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaaca 88  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||   ||||||||| ||| ||||||    
T  30441179 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacagtcaccttggctcccctcgtgacccaaca 30441266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 6876926 - 6876852
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccc 75  Q
    ||||||||||||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||| |||||||    
T  6876926 ttgggtaagagtgtggtgtttctcttgtttgtgtggttgttctagcctcgatgtggacggtcccccgagctcccc 6876852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 211 - 316
Target Start/End: Original strand, 40518470 - 40518575
Alignment:
Q  211 tgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttgaggggg-agcacgatgaattgatggactcacacttgag 309  Q
    |||||||||||||| ||||||||||||||||  || ||| |||| |||||||||||  |||||||||| |||| ||||||||||||||||||||||||||    
T  40518470 tgtcggtccgtttgcggagaaaccagcaacgacgatacaagcaa-gtaagagcttccacttgaggggggagcatgatgaattgatggactcacacttgag 40518568  T
Q  310 ggggagt 316  Q
    |||||||    
T  40518569 ggggagt 40518575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 158
Target Start/End: Complemental strand, 3038016 - 3037874
Alignment:
Q  18 gtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgct-cccctca-tgatccaacagtggtatcagagccccggttcgacgaa 115  Q
    ||||||||  |||||| ||||||||||||||||||||||||||||||||| ||| ||||||| ||| |||||||||||||||||||||| ||||||| ||    
T  3038016 gtctctctatcttgtgtggttgttctagcctcgatgtggacggtcccccgagctccccctcagtgacccaacagtggtatcagagcccc-gttcgacaaa 3037918  T
Q  116 gggtgcgaccgaggccgccggttag-ttgcgcagaaagcagcaa 158  Q
     |||  |||| |||| ||||||  | ||||| ||||||||||||    
T  3037917 aggtaggaccaaggcagccggtccgtttgcgtagaaagcagcaa 3037874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 238 - 320
Target Start/End: Original strand, 3669973 - 3670056
Alignment:
Q  238 aacggagacacatgcaaagtaagagcttctgcttgagggg-gagcacgatgaattgatggactcacacttgagggggagtgttg 320  Q
    ||||| || ||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||| |||||    
T  3669973 aacggcgatacatgcaaagtaagagcttctgcttgaagggtgagcatgatgaattgatggactcacacttgagggggactgttg 3670056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 30359365 - 30359500
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacgg-tcccccgcgctcccctc-atgatccaacagtggtatcag 98  Q
    |||||||||||||||||||||||||| ||||||  |||||| ||||||| ||||||| || |||| || ||||||||| |||| ||||||||||||||||    
T  30359365 ttgggtaagagtgtggtgtctctctttcttgtgatgttgttttagcctcaatgtggatggttccctcgagctcccctcaatgacccaacagtggtatcag 30359464  T
Q  99 agccccggttcgacgaagggtgcgaccgaggccgccggt 137  Q
    ||  || |||||||||||||  |||||||||| ||||||    
T  30359465 ag--cctgttcgacgaaggg-acgaccgaggcagccggt 30359500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 247 - 320
Target Start/End: Complemental strand, 1014107 - 1014033
Alignment:
Q  247 acatgcaaagtaagagcttctgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttg 320  Q
    |||||||||||||||||||| |||||| ||||||| | |||||||||||||||||||||||||||||||||||||    
T  1014107 acatgcaaagtaagagcttccgcttgaagggggagtatgatgaattgatggactcacacttgagggggagtgttg 1014033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 6651588 - 6651653
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtccccc 66  Q
    ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| ||||||||    
T  6651588 ttgggtaagagtgtggtgtctctcttgcttgtgcgattgttctaacctcgatgtggatggtccccc 6651653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 4 - 105
Target Start/End: Complemental strand, 40579567 - 40579466
Alignment:
Q  4 ggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccc 103  Q
    |||||||||||||||||||| |||||||| ||||||||||| |||||||||||||| ||| ||  ||||||| ||||| |||  | ||||||||||||||    
T  40579567 ggtaagagtgtggtgtctctattgcttgtacggttgttctatcctcgatgtggacgatcctccatgctccccacatgacccagtattggtatcagagccc 40579468  T
Q  104 cg 105  Q
    ||    
T  40579467 cg 40579466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 45122718 - 45122882
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcg-----ctcccctcatgatccaacagtggtat 95  Q
    ||||||| |||||||| |||||||||||||||| |||||||| |||||||||||||| ||||||||  |     |||||| ||||| | |||||||| ||    
T  45122718 ttgggtatgagtgtggcgtctctcttgcttgtgtggttgttcaagcctcgatgtggaaggtccccctggcccgactccccccatgaccaaacagtggcat 45122817  T
Q  96 cagagccccggttcgacgaagggtgcgaccgaggccgccggttag-ttgcgcagaaagcagcaacg 160  Q
    ||||| ||  |||||||||||||| |||||||||| ||| ||  | |||||||||||||| |||||    
T  45122818 cagag-cctagttcgacgaagggtacgaccgaggcagccagtccgtttgcgcagaaagcaacaacg 45122882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 6 - 61
Target Start/End: Complemental strand, 9482663 - 9482608
Alignment:
Q  6 taagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggt 61  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  9482663 taagagtgtggtatctctcttgcttgtgcggttgttctagcctcgatgtggacggt 9482608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 20870637 - 20870550
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaaca 88  Q
    |||| |||||||||||||||||||||||||||| |||||||||| ||| ||| |||||||||| ||  ||||||||||||| ||||||    
T  20870637 ttggataagagtgtggtgtctctcttgcttgtgtggttgttctaaccttgatatggacggtcctcctggctcccctcatgacccaaca 20870550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 41129082 - 41129161
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatg 80  Q
    ||||||| |||||||||||||||||| |||||| |||||||| | |||||||||||||||||||||  ||||||||||||    
T  41129082 ttgggtatgagtgtggtgtctctcttacttgtgtggttgttcaaacctcgatgtggacggtcccccaggctcccctcatg 41129161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 34835303 - 34835377
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccc 75  Q
    |||||||||||||||||||| |||||||||||| |||| ||||||||||||||| |||||||||||  |||||||    
T  34835303 ttgggtaagagtgtggtgtcactcttgcttgtgtggttattctagcctcgatgtagacggtccccctggctcccc 34835377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 34835569 - 34835643
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccc 75  Q
    |||||||||||||||||||| |||||||||||| |||| ||||||||||||||| |||||||||||  |||||||    
T  34835569 ttgggtaagagtgtggtgtcactcttgcttgtgtggttattctagcctcgatgtagacggtccccctggctcccc 34835643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 34835835 - 34835909
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccc 75  Q
    |||||||||||||||||||| |||||||||||| |||| ||||||||||||||| |||||||||||  |||||||    
T  34835835 ttgggtaagagtgtggtgtcactcttgcttgtgtggttattctagcctcgatgtagacggtccccctggctcccc 34835909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 204 - 320
Target Start/End: Original strand, 147712 - 147823
Alignment:
Q  204 caagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttga-gggggagcacgatgaattgatggactcac 302  Q
    ||||||||||||||||||||| |||||||||| |||||  || |||     |||||||||||| |||| | ||||||||  |||||||||||||||||||    
T  147712 caagcagtgtcggtccgtttgcggagaaaccaacaacgacgataca-----agtaagagcttccgcttaaagggggagct-gatgaattgatggactcac 147805  T
Q  303 acttgagggggagtgttg 320  Q
    ||||||||||||||||||    
T  147806 acttgagggggagtgttg 147823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 43274699 - 43274626
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctccc 74  Q
    ||||||| |||||||||||||||||| ||| || |||||||| |||||||||||||||||||||||| ||||||    
T  43274699 ttgggtatgagtgtggtgtctctcttacttatggggttgttccagcctcgatgtggacggtcccccgagctccc 43274626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 208 - 320
Target Start/End: Complemental strand, 8919039 - 8918928
Alignment:
Q  208 cagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttgagggggagcacgatgaattgatggactcacacttg 307  Q
    ||||||||||||||||| | ||||| ||||||||| || ||| |||| || |||||||| |||| | ||||  || ||||||| ||||||||||||||||    
T  8919039 cagtgtcggtccgtttgcgaagaaatcagcaacggcgatacaagcaa-gttagagcttccgcttaaagggggacatgatgaatagatggactcacacttg 8918941  T
Q  308 agggggagtgttg 320  Q
    |||||||||||||    
T  8918940 agggggagtgttg 8918928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 9608839 - 9609018
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatcca----------acagt 90  Q
    ||||||| |||||||| |||||||||||| ||| |||||||||||||||||||||||||| |||||  || |||||  ||| |||          |||||    
T  9608839 ttgggtatgagtgtggcgtctctcttgctagtgaggttgttctagcctcgatgtggacgg-ccccctggc-ccccttgtgacccaacagtggtatacagt 9608936  T
Q  91 ggtatcagagccccggttcgacgaagggtgcgaccgaggccgccggttag-ttgcgcagaaagcagcaacgacggtacaagc 171  Q
    |||||||| ||||||||||||| |||||| |||||||||   |||||  | ||||||| |||||||||||| ||||||||||    
T  9608937 ggtatcagtgccccggttcgacaaagggtacgaccgaggaaaccggtccgtttgcgcataaagcagcaacggcggtacaagc 9609018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 45122121 - 45122067
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtg 55  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  45122121 ttgggtaagagtgtggtgtctctcttacttgtggggttgttctagcctcgatgtg 45122067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 6731993 - 6732045
Alignment:
Q  5 gtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtgga 57  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  6731993 gtaagagtgtggtgtctctcttgcttatgcggttgttctaacctcgatgtgga 6732045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 18371725 - 18371637
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacgg-tcccccgcgctcccctcatgatccaaca 88  Q
    ||||||||||||||||||| |||||   ||||||||||| |||||| ||||||||||||| ||||||| |||| |||||||| ||||||    
T  18371725 ttgggtaagagtgtggtgtgtctctcatttgtgcggttgctctagcttcgatgtggacggttcccccgagctctcctcatgacccaaca 18371637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 214 - 317
Target Start/End: Complemental strand, 18371925 - 18371821
Alignment:
Q  214 cggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttga-gggggagcacgatgaattgatggactcacacttgagggg 312  Q
    |||| |||||| ||||||||||||| ||| || |||  ||||  ||||||||| |||||| ||||| ||||||| || ||||||||||||||||||||||    
T  18371925 cggttcgtttgcggagaaaccagcagcggcgatacaaacaaataaagagcttccgcttgaagggggggcacgataaagtgatggactcacacttgagggg 18371826  T
Q  313 gagtg 317  Q
    |||||    
T  18371825 gagtg 18371821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 30359703 - 30359763
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggt 61  Q
    |||||||||||||||||||||||||| ||| ||||||||||||| | ||||||||||||||    
T  30359703 ttgggtaagagtgtggtgtctctcttacttatgcggttgttctaacttcgatgtggacggt 30359763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 214 - 320
Target Start/End: Complemental strand, 18372640 - 18372533
Alignment:
Q  214 cggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttgaggggga-gcacgatgaattgatggactcacacttgagggg 312  Q
    ||||||||||| ||||||||||||| ||| ||  ||  ||||  |||||||||  ||||| ||||| ||||||| || ||||||||||||||||||||||    
T  18372640 cggtccgtttgcggagaaaccagcagcggcgattcaaacaaataaagagcttccccttgaaggggaagcacgataaagtgatggactcacacttgagggg 18372541  T
Q  313 gagtgttg 320  Q
    ||||||||    
T  18372540 gagtgttg 18372533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 33113431 - 33113368
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtccc 64  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||| ||| ||| ||||||||||    
T  33113431 ttgggtaagagtgtggtgtctctcttgctagtgtggttgttctaggctcaatgcggacggtccc 33113368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 147914 - 147968
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtg 55  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||| |||||    
T  147914 ttgggtaagagtgtggtgtctctcttacttgtgcagttgttctagcctcaatgtg 147968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 40518676 - 40518738
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcc 63  Q
    |||||||||||||||  ||| |||||||||||| ||||||||||||||| |||||||||||||    
T  40518676 ttgggtaagagtgtgacgtcactcttgcttgtgtggttgttctagcctcaatgtggacggtcc 40518738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 227 - 320
Target Start/End: Original strand, 45122907 - 45123000
Alignment:
Q  227 gagaaaccagcaacggagacacatgcaaagtaagagcttctgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttg 320  Q
    |||||||||||||||  || ||| |||| ||||||||||| |||||| |||||| || ||||||| |||||||| ||||||||||||||||||||    
T  45122907 gagaaaccagcaacgacgatacaagcaa-gtaagagcttccgcttgaagggggaacatgatgaatagatggacttacacttgagggggagtgttg 45123000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 1513979 - 1513914
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtccccc 66  Q
    |||||||| |||||||| |||||||| | |||| |||| |||||||||||||||||||||||||||    
T  1513979 ttgggtaaaagtgtggtatctctcttacatgtggggttattctagcctcgatgtggacggtccccc 1513914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 119
Target Start/End: Complemental strand, 9620737 - 9620624
Alignment:
Q  6 taagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccg 105  Q
    ||||||| || |||||||||  |||||| ||||| ||  |||| |||||||||||||||||| ||||||||| ||| |||||  |||||||||||    |    
T  9620737 taagagtttgatgtctctctcacttgtgtggttgctcaggcctggatgtggacggtcccccgggctcccctcgtgacccaacgatggtatcagagttgtg 9620638  T
Q  106 gttcgacgaagggt 119  Q
    ||||||||||||||    
T  9620637 gttcgacgaagggt 9620624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 1013931 - 1013879
Alignment:
Q  5 gtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtgga 57  Q
    ||||||||||| ||||||| || ||||||||||||||||||||||||||||||    
T  1013931 gtaagagtgtgttgtctcttttacttgtgcggttgttctagcctcgatgtgga 1013879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 9309451 - 9309522
Alignment:
Q  3 gggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccc 75  Q
    |||||||||||||||||||||||   |  || ||||||||||||||||||||||||||||||||| |||||||    
T  9309451 gggtaagagtgtggtgtctctctcagta-tgtggttgttctagcctcgatgtggacggtcccccgagctcccc 9309522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 257 - 320
Target Start/End: Original strand, 30359539 - 30359603
Alignment:
Q  257 taagagcttctgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttg 320  Q
    |||||||||| |||||| ||||||||| ||| ||||||||||||||||||||||||||| |||||    
T  30359539 taagagcttccgcttgaagggggagcatgataaattgatggactcacacttgagggggaatgttg 30359603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 4154730 - 4154614
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagag 100  Q
    |||||||||||||||| |||||||  ||||||| ||||| ||| |||| ||||||   |||||| ||  ||||| |||||| ||||||||||||||| ||    
T  4154730 ttgggtaagagtgtggcgtctctc--gcttgtgtggttgctctggcctagatgtgagtggtccctcggactcccttcatgacccaacagtggtatcaaag 4154633  T
Q  101 ccccggttcgacgaagggt 119  Q
    ||  | |||||||||||||    
T  4154632 ccgagtttcgacgaagggt 4154614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 273 - 320
Target Start/End: Complemental strand, 18372465 - 18372418
Alignment:
Q  273 agggggagcacgatgaattgatggactcacacttgagggggagtgttg 320  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||    
T  18372465 agggggagcacgataaagtgatggactcacacttgagggggagtgttg 18372418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 41972255 - 41972341
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaaca 88  Q
    |||||||||||||||| ||| |||||||||||| |||||||| |||||| || ||||||||| ||||  |||||| ||||| ||||||    
T  41972255 ttgggtaagagtgtggcgtcactcttgcttgtgtggttgttccagcctcaatatggacggtctcccgaactcccc-catgacccaaca 41972341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 25561877 - 25561815
Alignment:
Q  3 gggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccc 65  Q
    |||||||||||||   ||||||||||||||| ||||| ||||||||||||||||| |||||||    
T  25561877 gggtaagagtgtgacatctctcttgcttgtgtggttgctctagcctcgatgtggaaggtcccc 25561815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 45123107 - 45123165
Alignment:
Q  8 agagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtccccc 66  Q
    |||||||||||||||||||  ||||| ||||||||||  ||||||||||||||||||||    
T  45123107 agagtgtggtgtctctcttatttgtggggttgttctaatctcgatgtggacggtccccc 45123165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 32640596 - 32640515
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcc-cccgcgctcccctcatga 81  Q
    |||||||||||||| | ||||||||||||| || | |||||||||||||||||||  |||||| || | |||||||||||||    
T  32640596 ttgggtaagagtgttgcgtctctcttgcttttgtgattgttctagcctcgatgtgagcggtccgccagagctcccctcatga 32640515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 279 - 320
Target Start/End: Original strand, 34835427 - 34835468
Alignment:
Q  279 agcacgatgaattgatggactcacacttgagggggagtgttg 320  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  34835427 agcatgatgaattgatggactcacacttgagggggagtgttg 34835468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 279 - 320
Target Start/End: Original strand, 34835693 - 34835734
Alignment:
Q  279 agcacgatgaattgatggactcacacttgagggggagtgttg 320  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  34835693 agcatgatgaattgatggactcacacttgagggggagtgttg 34835734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 320
Target Start/End: Original strand, 45122515 - 45122627
Alignment:
Q  204 caagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttga-gggggagcacgatgaattgatggactcac 302  Q
    ||||||||||||||||||||| |||| ||||| ||||   || |||     |||||||||||| ||| || ||||||||| ||||||| || | ||||||    
T  45122515 caagcagtgtcggtccgtttgcggaggaaccaacaacatcgataca-----agtaagagcttccgctggaagggggagcatgatgaatagaagaactcac 45122609  T
Q  303 acttgagggggagtgttg 320  Q
    ||||||||||||||||||    
T  45122610 acttgagggggagtgttg 45122627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 8918828 - 8918764
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccc 65  Q
    |||||||||||||||  |||| |||||| |||| ||||||| || ||||||||||||||||||||    
T  8918828 ttgggtaagagtgtgacgtctttcttgcgtgtgtggttgttttaacctcgatgtggacggtcccc 8918764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 225 - 320
Target Start/End: Complemental strand, 9482857 - 9482766
Alignment:
Q  225 tggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttgagggggagcacgatgaattgatggactcacacttgagggggagtgttg 320  Q
    |||||||||||||||||| || ||| |||| ||||||||||| |||||| |||| ||||  ||||||| |||||||||  ||||||||||||||||    
T  9482857 tggagaaaccagcaacggcgatacaagcaa-gtaagagcttccgcttgaagggg-gcacagtgaattgttggactcac--ttgagggggagtgttg 9482766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 45121974 - 45121898
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctc 77  Q
    |||||||| ||||||| |||||| ||||| ||| |||| ||| |||||||||||||| ||||||||  |||||||||    
T  45121974 ttgggtaacagtgtggcgtctcttttgctcgtgtggttattcaagcctcgatgtggaaggtcccccaggctcccctc 45121898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 274 - 320
Target Start/End: Original strand, 9309303 - 9309349
Alignment:
Q  274 gggggagcacgatgaattgatggactcacacttgagggggagtgttg 320  Q
    ||||||||||||| || ||||||||||||| ||||||||||||||||    
T  9309303 gggggagcacgataaagtgatggactcacaattgagggggagtgttg 9309349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 274 - 320
Target Start/End: Complemental strand, 45121865 - 45121819
Alignment:
Q  274 gggggagcacgatgaattgatggactcacacttgagggggagtgttg 320  Q
    ||||||||||||| || |||||||||||||||| |||||||||||||    
T  45121865 gggggagcacgataaagtgatggactcacacttaagggggagtgttg 45121819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 314
Target Start/End: Complemental strand, 4154506 - 4154449
Alignment:
Q  258 aagagcttctgcttgagggg-gagcacgatgaattgatggactcacacttgaggggga 314  Q
    |||||||||||||||||||| ||||| || |  |||||||||||||||||||||||||    
T  4154506 aagagcttctgcttgaggggtgagcatgaagttttgatggactcacacttgaggggga 4154449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 85 - 169
Target Start/End: Complemental strand, 9483005 - 9482921
Alignment:
Q  85 aacagtggtatcagagccccggttcgacgaagggtgcgaccgaggccgccggttag-ttgcgcagaaagcagcaacgacggtacaa 169  Q
    |||| |||||||||||||||| ||||||||||||| |||||||||| | ||||  | |||| ||||||  ||||||||||||||||    
T  9483005 aacaatggtatcagagccccg-ttcgacgaagggtacgaccgaggcagtcggtccgtttgcacagaaaaaagcaacgacggtacaa 9482921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 45121716 - 45121663
Alignment:
Q  5 gtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggac 58  Q
    ||||||||||| | |||||||| ||| || ||||||||||||||||||||||||    
T  45121716 gtaagagtgtgatatctctcttacttatggggttgttctagcctcgatgtggac 45121663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 320
Target Start/End: Original strand, 6731856 - 6731900
Alignment:
Q  276 gggagcacgatgaattgatggactcacacttgagggggagtgttg 320  Q
    ||||||| ||||||| |||||||||||| ||||||||||||||||    
T  6731856 gggagcatgatgaatagatggactcacatttgagggggagtgttg 6731900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 70335 - 70272
Alignment:
Q  4 ggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccg 67  Q
    ||||||||||||  |||| ||||||||||| |||||||||| |||| ||| |||||||| ||||    
T  70335 ggtaagagtgtgacgtctatcttgcttgtgtggttgttctaacctcaatgcggacggtctcccg 70272  T

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Target: chr8; HSP #71
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 12283966 - 12284021
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtgg 56  Q
    |||| ||||||||| ||||||||||  |||||| ||||||||||||||| ||||||    
T  12283966 ttggataagagtgtagtgtctctctcacttgtgtggttgttctagcctctatgtgg 12284021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 18373157 - 18373094
Alignment:
Q  258 aagagcttctgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttg 320  Q
    |||||||||  ||||| ||||||||||||| || |||||||||||||||||||  |||||||||    
T  18373157 aagagcttccccttgatgggggagcacgataaagtgatggactcacacttgagatggagtgttg 18373094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 3038074 - 3038020
Alignment:
Q  43 tagcctcgatgtggacggtcccccgcgct-cccctca-tgatccaacagtggtat 95  Q
    ||||||||||||||||||||||||| ||| ||||||| ||| |||||||||||||    
T  3038074 tagcctcgatgtggacggtcccccgagctccccctcagtgacccaacagtggtat 3038020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 320
Target Start/End: Complemental strand, 43274777 - 43274731
Alignment:
Q  274 gggggagcacgatgaattgatggactcacacttgagggggagtgttg 320  Q
    ||||||||||||| || |||||||||||||||||||||  |||||||    
T  43274777 gggggagcacgataaagtgatggactcacacttgagggacagtgttg 43274731  T

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Target: chr8; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 242
Target Start/End: Complemental strand, 9483084 - 9483047
Alignment:
Q  205 aagcagtgtcggtccgtttgtggagaaaccagcaacgg 242  Q
    |||||||||||||||||||| |||||||||| ||||||    
T  9483084 aagcagtgtcggtccgtttgcggagaaaccatcaacgg 9483047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 310
Target Start/End: Complemental strand, 18372907 - 18372870
Alignment:
Q  273 agggggagcacgatgaattgatggactcacacttgagg 310  Q
    |||||||||||||| || ||||||||||||||||||||    
T  18372907 agggggagcacgataaagtgatggactcacacttgagg 18372870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 32305571 - 32305636
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtccccc 66  Q
    |||| ||||||||||| |||| | || ||| ||| ||||||||| ||| |||||||||||||||||    
T  32305571 ttggataagagtgtggcgtctttattacttatgcagttgttctaaccttgatgtggacggtccccc 32305636  T

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Target: chr8; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 9609182 - 9609222
Alignment:
Q  4 ggtaagagtgtggtgtctctcttgcttgtgcggttgttcta 44  Q
    ||||||||||||| |||||||||||| ||| ||||||||||    
T  9609182 ggtaagagtgtggcgtctctcttgctagtgtggttgttcta 9609222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 16524463 - 16524503
Alignment:
Q  5 gtaagagtgtggtgtctctcttgcttgtgcggttgttctag 45  Q
    |||||||||||||||||||||| |||||| ||||| |||||    
T  16524463 gtaagagtgtggtgtctctcttacttgtgtggttgctctag 16524503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 18380077 - 18380020
Alignment:
Q  5 gtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtccc 64  Q
    |||||||||||||| ||||  |||||||||| || ||||||| ||||||||||| |||||    
T  18380077 gtaagagtgtggtgcctct--tgcttgtgcgattcttctagcttcgatgtggacagtccc 18380020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 34629764 - 34629708
Alignment:
Q  2 tgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggac 58  Q
    ||||||||||||||| ||||||||  |||||||||| ||| | |||| |||||||||    
T  34629764 tgggtaagagtgtggcgtctctctcacttgtgcggtagttatggccttgatgtggac 34629708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 119; Significance: 9e-61; HSPs: 64)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 6500544 - 6500729
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctca-tgatccaacagtggtatcaga 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| | | |||||||||||||||||    
T  6500544 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccaggctcccctcacttacccaacagtggtatcaga 6500643  T
Q  100 gccccggttcgacgaagggtgcgaccgaggccgccggttagttgcgcagaaagcagcaacgacggtacaagcagcaagtggctcctt 186  Q
    |  ||||||||||||||||||| |||||||| ||| | | |||||||||||||| |||||| ||||| |||||||||||||||||||    
T  6500644 gttccggttcgacgaagggtgcaaccgaggcagccag-tcgttgcgcagaaagccgcaacggcggtataagcagcaagtggctcctt 6500729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 38427313 - 38427486
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctc-atgatccaacagtggtatcaga 99  Q
    |||||||||||||||| ||||||||||||||||||||||||||| ||||||||| | |||||||||| |||||| || |||||||||||||||||| |||    
T  38427313 ttgggtaagagtgtggcgtctctcttgcttgtgcggttgttctaacctcgatgttggcggtcccccgagctcccttcgatgatccaacagtggtattaga 38427412  T
Q  100 gccccggttcgacgaagggtgcgaccgaggccgccggt-tagttgcgcagaaagcagcaacgacggtacaagca 172  Q
    ||||||||||||||||||||| |||| || | ||| || |  ||||||||||| ||||||||||| ||||||||    
T  38427413 gccccggttcgacgaagggtgtgaccaagacagccagtctgtttgcgcagaaaccagcaacgacgatacaagca 38427486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 9498718 - 9498534
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagag 100  Q
    ||||||||||||||||||||||||||| || || | | || |||||||| ||||||||||||||||  ||||||||| ||| ||||  | ||||||||||    
T  9498718 ttgggtaagagtgtggtgtctctcttgtttatgtgctggt-ctagcctcaatgtggacggtccccctagctcccctcgtgacccaagtgcggtatcagag 9498620  T
Q  101 ccccggttcgacgaagggtgcgaccgaggccgccggttagttgcgcagaaagcagcaacgacggtacaagcagcaagtggctccttgt 188  Q
    ||||| |||||| |||||| |||||||||| ||||||  |||||||||||||| |||||| || ||||||||||||||||||||||||    
T  9498619 ccccg-ttcgacaaagggtacgaccgaggcagccggtc-gttgcgcagaaagctgcaacggcgctacaagcagcaagtggctccttgt 9498534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 32487487 - 32487661
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagag 100  Q
    |||||||||||||||  || |||||||||| || ||||||||||||||||||||||| ||||||||  ||| ||| ||||| |||||  |||||||||||    
T  32487487 ttgggtaagagtgtgacgtatctcttgcttatgtggttgttctagcctcgatgtggatggtcccccaagcttcccccatgacccaactctggtatcagag 32487586  T
Q  101 ccccggttcgacgaagggtgcgaccgaggccgccggttagttgcgcagaaagcagcaacgacggtacaagcagcaa 176  Q
    ||||| |||||||||||||||||| ||||| ||| | | |||| ||||||||| |||||| |||||||||||||||    
T  32487587 ccccgattcgacgaagggtgcgactgaggcagcc-gatcgttgtgcagaaagccgcaacggcggtacaagcagcaa 32487661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 25328029 - 25328195
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctca-tgatccaacagtggtatcaga 99  Q
    ||||||||||||||||||||||||||||  ||| ||||||||||||||| ||||||||||||||||| |||||||||| ||| |||||||||||| ||||    
T  25328029 ttgggtaagagtgtggtgtctctcttgcaagtgtggttgttctagcctcaatgtggacggtcccccgagctcccctcagtgacccaacagtggtaccaga 25328128  T
Q  100 gccccggttcgacgaagggtgcgaccgaggccgccggttag-ttgcgcagaaagcagcaacgacggt 165  Q
    |||||  ||||||||||||  ||| |||||| ||||||  | |||| || |||||||||||| ||||    
T  25328129 gccccccttcgacgaagggcacgaacgaggcagccggtccgtttgcacaaaaagcagcaacggcggt 25328195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 5 - 170
Target Start/End: Original strand, 623916 - 624080
Alignment:
Q  5 gtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctca-tgatccaacagtggtatcagagccc 103  Q
    |||||||||||||||||||||  |||||| ||||||||||||||| |||| |||||||||||| |||  ||||| ||| |||||||||||||||||| ||    
T  623916 gtaagagtgtggtgtctctctcacttgtggggttgttctagcctcaatgtagacggtcccccgagct--cctcagtgacccaacagtggtatcagag-cc 624012  T
Q  104 cggttcgacgaagggtgcgaccgaggccgccggttag-ttgcgcagaaagcagcaacgacggtacaag 170  Q
    | |||||| ||||||| |||||| ||| | ||||  | |||||||||||| |||||||||||||||||    
T  624013 ctgttcgaagaagggtacgaccgtggcagtcggtccgtttgcgcagaaagaagcaacgacggtacaag 624080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 4 - 172
Target Start/End: Complemental strand, 3295406 - 3295246
Alignment:
Q  4 ggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccc 103  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||  ||||       |||    
T  3295406 ggtaagagtgtgttgtctctcttgcttgtgtggttgttctagcctcgatgtggacggtccccctcactcccctcatgatccaactctggt-------ccc 3295314  T
Q  104 cggttcgacgaagggtgcgaccgaggccgccggttag-ttgcgcagaaagcagcaacgacggtacaagca 172  Q
    |  ||||| ||||||| |||||||||| | ||||  | |||||||||||||||||||| || ||||||||    
T  3295313 c--ttcgatgaagggtacgaccgaggcagtcggtccgtttgcgcagaaagcagcaacggcgatacaagca 3295246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 40296379 - 40296292
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaaca 88  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||  ||||||||| ||||||    
T  40296379 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccaggcctccctcatgacccaaca 40296292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 5 - 137
Target Start/End: Original strand, 299587 - 299720
Alignment:
Q  5 gtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtccccc-gcgctcccctcatga-tccaacagtggtatcagagcc 102  Q
    |||||||||||| |||||| |||||||| ||||||||||||| ||||||||||| ||||||| | |||||||||||||  ||||||||||||||||||||    
T  299587 gtaagagtgtggcgtctctattgcttgtacggttgttctagcatcgatgtggacagtcccccggagctcccctcatgaccccaacagtggtatcagagcc 299686  T
Q  103 ccggttcgacgaagggtgcgaccgaggccgccggt 137  Q
     | |||||||||||||||||| | |||| ||||||    
T  299687 tc-gttcgacgaagggtgcgatcaaggcagccggt 299720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 3295079 - 3294993
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaac 87  Q
    ||||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| ||||||| ||||||||||||||||||||    
T  3295079 ttgggtatgagtgtggtgtctctcttggttgtgtggttgttgtagcctcgatgtggacagtccccctcgctcccctcatgatccaac 3294993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 15370193 - 15370267
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccc 75  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| |||||||    
T  15370193 ttgggtaagagtgtggtgtctctcttgcttgtgggattgttctagcctcgatgtggacggtcccccgagctcccc 15370267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 27502097 - 27502013
Alignment:
Q  4 ggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaaca 88  Q
    ||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||  ||||||||||||| ||||||    
T  27502097 ggtaaaagtgtggtgtctctcttgcttgtgtggttgttctatcctcgatgtggacggtccccctagctcccctcatgacccaaca 27502013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 6500916 - 6501015
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctca-tgatccaacagtggtatcaga 99  Q
    |||| ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||  |||||||||| | | |||| ||||||||||||    
T  6500916 ttggataagagtgtggtgtctctcttacttgtgcggttattctagcctcgatgtggacggtcccccaggctcccctcacttacccaatagtggtatcaga 6501015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 42405660 - 42405588
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccc 75  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  42405660 ttgggtaagagtgtggtgtctct--tgcttgtgcggttgttctagcctcgatgtggacggtcccccgagctcccc 42405588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 4 - 130
Target Start/End: Original strand, 6224293 - 6224418
Alignment:
Q  4 ggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccc 103  Q
    ||||||||||||||| |||  ||||||||||||||| ||||||||| || |||||||||||||  ||||||||| || ||| ||||  ||||||||| ||    
T  6224293 ggtaagagtgtggtgcctcagttgcttgtgcggttggtctagcctcaatatggacggtcccccaggctcccctcgtgttcctacagcagtatcagag-cc 6224391  T
Q  104 cggttcgacgaagggtgcgaccgaggc 130  Q
    |||||||||||||||| |||| |||||    
T  6224392 cggttcgacgaagggtacgactgaggc 6224418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 192 - 312
Target Start/End: Complemental strand, 13416051 - 13415931
Alignment:
Q  192 gcaacggcagtgcaagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttg-agggggagcacgatgaat 290  Q
    |||||||| ||||||||||| |||||||||||| |||||||||| |||| | || ||| || ||||||||||||| ||||| |||||||||| | |||||    
T  13416051 gcaacggcggtgcaagcagtctcggtccgtttgcggagaaaccatcaacagcgatacaagc-aagtaagagcttccgcttgaagggggagcatgctgaat 13415953  T
Q  291 tgatggactcacacttgagggg 312  Q
     |||||||||||||||||||||    
T  13415952 agatggactcacacttgagggg 13415931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 34753089 - 34753001
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagt 90  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||  ||||||| ||||| ||||||||    
T  34753089 ttgggtaagagtgtggcgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtttcccaagctcccc-catgacccaacagt 34753001  T

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Target: chr5; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 41632876 - 41632941
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtccccc 66  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  41632876 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttttagtctcgatgtggacggtccccc 41632941  T

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Target: chr5; HSP #19
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 212 - 320
Target Start/End: Complemental strand, 3295287 - 3295180
Alignment:
Q  212 gtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttgagggggagcacgatgaattgatggactcacacttgaggg 311  Q
    ||||||||||||| | ||||| ||||||||| || ||| |||| ||||||||||| |||| |||||||||||||  || |||||||||||||||||||||    
T  3295287 gtcggtccgtttgcgcagaaagcagcaacggcgatacaagcaa-gtaagagcttccgcttaagggggagcacgaaaaagtgatggactcacacttgaggg 3295189  T
Q  312 ggagtgttg 320  Q
    |||||||||    
T  3295188 ggagtgttg 3295180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 7 - 165
Target Start/End: Complemental strand, 26075219 - 26075058
Alignment:
Q  7 aagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgc-gctcccctcatg--atccaacagtggtatcagagccc 103  Q
    |||||||||  |||||||||||  ||| ||||||| ||||||||||||||||  ||||||   |||||||| | |  ||||||||||||||||||||||     
T  26075219 aagagtgtgtcgtctctcttgcaagtgtggttgttttagcctcgatgtggactatccccctaagctcccctaaagcgatccaacagtggtatcagagcct 26075120  T
Q  104 cggttcgacgaagggtgcgaccgaggccgccggt-tagttgcgcagaaagcagcaacgacggt 165  Q
    || ||||||||||||| |||||||||| |||||| |  |||||||||||||||||||| ||||    
T  26075119 cg-ttcgacgaagggtacgaccgaggcagccggtctgtttgcgcagaaagcagcaacggcggt 26075058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 26900081 - 26899995
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaaca 88  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||||||||  ||||||| ||||| ||||||    
T  26900081 ttgggtaagagtgtggtgtctctcttgcttgtgggtttgttctagccttgatgtggacggtcccccaagctcccc-catgacccaaca 26899995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 36492281 - 36492218
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtccc 64  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  36492281 ttggataagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggacggtccc 36492218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 624290 - 624364
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccc 75  Q
    |||||||||||||||||||||||||  |||||| ||||||||||||||||||||||||||| ||||| |||||||    
T  624290 ttgggtaagagtgtggtgtctctctcacttgtggggttgttctagcctcgatgtggacggttccccgagctcccc 624364  T

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Target: chr5; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 1028578 - 1028504
Alignment:
Q  4 ggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctca 78  Q
    ||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  1028578 ggtaagagtgtggcgtctctctcacttgtgcggttgttctagcctcgatgtggacggtccccctagctcccctca 1028504  T

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Target: chr5; HSP #25
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 5 - 80
Target Start/End: Original strand, 15370500 - 15370575
Alignment:
Q  5 gtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatg 80  Q
    |||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||||| ||  ||||||||||||    
T  15370500 gtaagagtgtggcgtctctcttgtttgtggggttgttctagcctcgatgtggacggtcctccatgctcccctcatg 15370575  T

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Target: chr5; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 12662716 - 12662614
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctc---ccctcatgatccaacagtggtatca 97  Q
    |||||||||||||||||| || ||||||||||| |||| ||||||||||||||||| ||||||||| || ||   ||||||||| |||||  ||||||||    
T  12662716 ttgggtaagagtgtggtgcctttcttgcttgtggggttcttctagcctcgatgtggtcggtccccctcgttccctccctcatgacccaactctggtatca 12662617  T
Q  98 gag 100  Q
    |||    
T  12662616 gag 12662614  T

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Target: chr5; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 261 - 320
Target Start/End: Complemental strand, 24489424 - 24489365
Alignment:
Q  261 agcttctgcttgagggggagcacgatgaattgatggactcacacttgagggggagtgttg 320  Q
    |||||||| |||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  24489424 agcttctggttgaggggtagcatgatgaattgatggactcacacttgagggggagtgttg 24489365  T

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Target: chr5; HSP #28
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 13415824 - 13415774
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcga 51  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  13415824 ttgggtaagagtgtggcgtctctcttgcttgtgcggttgttctagcctcga 13415774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 35150100 - 35150228
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagag 100  Q
    |||||||| ||||||||||||||||  || ||| |||||||||| |||| |||||||| || ||||  ||||||| ||||| |||||  |||||||||||    
T  35150100 ttgggtaaaagtgtggtgtctctctcactagtgtggttgttctaacctcaatgtggaccgt-ccccttgctccccccatgacccaactctggtatcagag 35150198  T
Q  101 ccccggttcgacgaagggtgcgaccgaggc 130  Q
     | | |||||||||||||| ||||| ||||    
T  35150199 tcgcagttcgacgaagggtacgaccaaggc 35150228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 41170728 - 41170793
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtccccc 66  Q
    ||||||||||||||||||| | ||||||||||| |||||||||||||||| ||| |||||||||||    
T  41170728 ttgggtaagagtgtggtgtttttcttgcttgtgtggttgttctagcctcggtgtagacggtccccc 41170793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 204 - 320
Target Start/End: Original strand, 624077 - 624192
Alignment:
Q  204 caagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttgagggggagcacgatgaattgatggactcaca 303  Q
    |||| |||||||||||||||| |||||| |||||||||| || |||     |||||||||||| |||| | |||||||| ||||||| |||||| |||||    
T  624077 caagtagtgtcggtccgtttgcggagaacccagcaacggcgatacaaagcgagtaagagcttccgcttaaaggggagcatgatgaatagatgga-tcaca 624175  T
Q  304 cttgagggggagtgttg 320  Q
    ||||||||| |||||||    
T  624176 cttgaggggaagtgttg 624192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 18603184 - 18603124
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggt 61  Q
    ||||||||||||||||  ||||||||||||||| ||| |||||||||||||||||||||||    
T  18603184 ttgggtaagagtgtggcatctctcttgcttgtgtggtagttctagcctcgatgtggacggt 18603124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 33747865 - 33747925
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggt 61  Q
    |||| ||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||    
T  33747865 ttggataagagtgtggtgtctctcttccttatgcggttgttctagccttgatgtggacggt 33747925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 36568628 - 36568556
Alignment:
Q  4 ggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctca 78  Q
    ||||||||||||| ||||||||  |||||| |||||||||| |||||||||||| ||||||||| ||||||||||    
T  36568628 ggtaagagtgtggcgtctctct--cttgtgtggttgttctatcctcgatgtggaaggtcccccgagctcccctca 36568556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 251 - 320
Target Start/End: Original strand, 6500749 - 6500819
Alignment:
Q  251 gcaaagtaagagcttctgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttg 320  Q
    ||||||||||||||||  ||||| ||||||||| ||||||| ||||||||||||||||| |||||||||||    
T  6500749 gcaaagtaagagcttccccttgaagggggagcatgatgaatagatggactcacacttgatggggagtgttg 6500819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 238 - 319
Target Start/End: Complemental strand, 9498493 - 9498411
Alignment:
Q  238 aacggagacacatgcaaagtaagagcttctgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgtt 319  Q
    ||||| || ||| ||||||||||||||||  ||||| ||||||||| ||||||| |||||||||||||||||||||| |||||    
T  9498493 aacggtgatacaggcaaagtaagagcttccccttgaagggggagcatgatgaatagatggactcacacttgagggggtgtgtt 9498411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 301048 - 301132
Alignment:
Q  4 ggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaaca 88  Q
    |||||||||||||||||||||||||||||| || ||||| || ||||| ||| ||||||| |||  ||||||| |||| ||||||    
T  301048 ggtaagagtgtggtgtctctcttgcttgtgtggctgttcaagtctcgacgtgaacggtcctccgaactcccctaatgacccaaca 301132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 70 - 173
Target Start/End: Complemental strand, 13416136 - 13416033
Alignment:
Q  70 ctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtgcgaccgaggccgccggttagtt-gcgcagaaagcagcaacgacggtaca 168  Q
    |||||||  ||| |||||||||||||||||| |||| |||| |||||||| ||||||||||  |||||  ||| |||||||||||||||||| |||| ||    
T  13416136 ctcccctagtgacccaacagtggtatcagagtcccg-ttcgtcgaagggtacgaccgaggcaaccggtccgtttgcgcagaaagcagcaacggcggtgca 13416038  T
Q  169 agcag 173  Q
    |||||    
T  13416037 agcag 13416033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 43
Target Start/End: Complemental strand, 795293 - 795254
Alignment:
Q  4 ggtaagagtgtggtgtctctcttgcttgtgcggttgttct 43  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  795293 ggtaagagtgtggtgtctctcttgcttgtgcggttgttct 795254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 72
Target Start/End: Complemental strand, 11417037 - 11416970
Alignment:
Q  5 gtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctc 72  Q
    ||||||||||| | ||||||||||||||| | |||||||||| |||||||||| |||||||| |||||    
T  11417037 gtaagagtgtgatctctctcttgcttgtgggattgttctagcttcgatgtggatggtccccctcgctc 11416970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 24489266 - 24489207
Alignment:
Q  5 gtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtccc 64  Q
    |||||||||||| |||||| || |||||||||||||||||| |||||||||| |||||||    
T  24489266 gtaagagtgtggcgtctcttttacttgtgcggttgttctagtctcgatgtgggcggtccc 24489207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 273 - 320
Target Start/End: Complemental strand, 26074993 - 26074946
Alignment:
Q  273 agggggagcacgatgaattgatggactcacacttgagggggagtgttg 320  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||    
T  26074993 agggggagcttgatgaattgatggactcacacttgagggggagtgttg 26074946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 36522120 - 36522057
Alignment:
Q  258 aagagcttctgcttgagg-gggagcacgatgaattgatggactcacacttgagggggagtgttg 320  Q
    ||||||||| |||||||| ||||  |||||||||||||||||||||||||||||| ||||||||    
T  36522120 aagagcttccgcttgaggtgggataacgatgaattgatggactcacacttgagggagagtgttg 36522057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 258 - 311
Target Start/End: Original strand, 31509555 - 31509609
Alignment:
Q  258 aagagcttctgcttgagggg-gagcacgatgaattgatggactcacacttgaggg 311  Q
    ||||||||| |||||||||| ||||| ||||||||||||||||||||||||||||    
T  31509555 aagagcttccgcttgaggggtgagcatgatgaattgatggactcacacttgaggg 31509609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 313
Target Start/End: Original strand, 35150607 - 35150719
Alignment:
Q  204 caagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagt--aagagcttctgc-ttgagggggagcacgatgaattgatggactc 300  Q
    ||||||||||||||||||||| |||||| |||||||||| || |||    ||||  || |||||| || ||| ||| ||||| |||||||||||||||||    
T  35150607 caagcagtgtcggtccgtttgcggagaacccagcaacggtgatacaaagcaagtaaaaaagcttccgctttgggggtgagcatgatgaattgatggactc 35150706  T
Q  301 acacttgaggggg 313  Q
    ||||||| |||||    
T  35150707 acacttggggggg 35150719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 9 - 61
Target Start/End: Original strand, 24489583 - 24489635
Alignment:
Q  9 gagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggt 61  Q
    |||||||||||||||||||||||||| ||||||||| ||||||| || |||||    
T  24489583 gagtgtggtgtctctcttgcttgtgcagttgttctaacctcgatatgaacggt 24489635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 192 - 319
Target Start/End: Original strand, 26074477 - 26074605
Alignment:
Q  192 gcaacggcagtgcaagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttgaggggg-agcacgatgaat 290  Q
    |||||||| ||||||||| |||||||| ||||| | |||| ||| ||| ||  | |||    |||||||||||||  ||||| || | |||| ||| |||    
T  26074477 gcaacggcggtgcaagcaatgtcggtctgtttgcgaagaacccaacaatggcaatacaaagcaagtaagagcttccacttgaaggagtagcatgatcaat 26074576  T
Q  291 tgatggactcacacttgagggggagtgtt 319  Q
    |||||||||||||||||||||||||||||    
T  26074577 tgatggactcacacttgagggggagtgtt 26074605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 54 - 173
Target Start/End: Original strand, 35150491 - 35150613
Alignment:
Q  54 tggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtgcgaccgaggc----cgccggt-tagttgcgcag 148  Q
    |||||||||||||| ||| | | | ||| |||||||||||||||||||||| ||| ||||||||||  |||||||||     |||||| |  ||||||||    
T  35150491 tggacggtcccccgagcttctcac-tgacccaacagtggtatcagagcccc-gtttgacgaagggtatgaccgaggcaggtagccggtctgtttgcgcag 35150588  T
Q  149 aaagcagcaacgacggtacaagcag 173  Q
    |||||||||||||||| ||||||||    
T  35150589 aaagcagcaacgacggaacaagcag 35150613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 228 - 320
Target Start/End: Original strand, 38427461 - 38427553
Alignment:
Q  228 agaaaccagcaacggagacacatgcaaagtaagagcttctgcttgag-ggggagcacgatgaattgatggactcacacttgagggggagtgttg 320  Q
    ||||||||||||||  || ||| |||| |||||||||||  |||||  |||| |||  |||||| |||||||||||||||||||||||||||||    
T  38427461 agaaaccagcaacgacgatacaagcaa-gtaagagcttcctcttgaaaggggtgcatcatgaatagatggactcacacttgagggggagtgttg 38427553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 5723855 - 5723811
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctag 45  Q
    ||||| |||||| | ||||||||||||||||||||||||||||||    
T  5723855 ttgggaaagagtatagtgtctctcttgcttgtgcggttgttctag 5723811  T

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Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 38427645 - 38427697
Alignment:
Q  5 gtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtgga 57  Q
    |||||||||||  ||||||||  ||||||||||||||||| ||||||||||||    
T  38427645 gtaagagtgtgacgtctctctcacttgtgcggttgttctaacctcgatgtgga 38427697  T

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Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 254 - 320
Target Start/End: Complemental strand, 13785837 - 13785770
Alignment:
Q  254 aagtaagagcttctgcttgagggggag-cacgatgaattgatggactcacacttgagggggagtgttg 320  Q
    ||||||||||||| |||||| |||||  || ||||||| ||| |||||||| ||||||||||||||||    
T  13785837 aagtaagagcttccgcttgaaggggaaacatgatgaatagatagactcacatttgagggggagtgttg 13785770  T

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Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 37 - 188
Target Start/End: Complemental strand, 13786029 - 13785879
Alignment:
Q  37 ttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtgcgaccgaggccgccgg 136  Q
    ||||||| |||||| ||| ||||||||| |   |||||||||||| ||| || |||||||||||||  | || | | || ||  |||| ||||  |||||    
T  13786029 ttgttctggcctcgttgtcgacggtccctctaactcccctcatgacccatcaatggtatcagagcctag-ttgggcaaaaggcacgactgaggtagccgg 13785931  T
Q  137 ttagttgcgcagaaagcagcaacgacggtacaagcagcaagtggctccttgt 188  Q
    |  |||||||||||| || ||||||||||||| | |||||||||||| ||||    
T  13785930 tctgttgcgcagaaaacaacaacgacggtacatgtagcaagtggctctttgt 13785879  T

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Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 26074210 - 26074155
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtgg 56  Q
    |||||||||||||||||||||||||  || ||| ||||| |||| |||||||||||    
T  26074210 ttgggtaagagtgtggtgtctctctcactagtgtggttgctctaacctcgatgtgg 26074155  T

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Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 26074706 - 26074761
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtgg 56  Q
    |||||||||||||||||||||||||  || ||| ||||| |||| |||||||||||    
T  26074706 ttgggtaagagtgtggtgtctctctcactagtgtggttgctctaacctcgatgtgg 26074761  T

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Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 127
Target Start/End: Complemental strand, 3622910 - 3622828
Alignment:
Q  45 gcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtgcgaccga 127  Q
    |||| |||||||  ||||||| | ||| ||||||||| |||||| |||||||||||    ||||||||||||||| |||||||    
T  3622910 gcctggatgtgggtggtccccagggcttccctcatgacccaacaatggtatcagagttgaggttcgacgaagggttcgaccga 3622828  T

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Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 35167899 - 35167837
Alignment:
Q  4 ggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtccccc 66  Q
    |||||||||||| ||||||||   || ||| |||||||||||| ||||||||||| |||||||    
T  35167899 ggtaagagtgtgatgtctctcacactagtgtggttgttctagcatcgatgtggactgtccccc 35167837  T

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Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 320
Target Start/End: Complemental strand, 36522459 - 36522398
Alignment:
Q  261 agcttctgcttgagggg--gagcacgatgaattgatggactcacacttgagggggagtgttg 320  Q
    |||||| ||||||||||  || ||||||||||||||||| | ||| ||||||||||||||||    
T  36522459 agcttccgcttgaggggaggaacacgatgaattgatggatttacaattgagggggagtgttg 36522398  T

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Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 129
Target Start/End: Complemental strand, 24489560 - 24489515
Alignment:
Q  84 caacagtggtatcagagccccggttcgacgaagggtgcgaccgagg 129  Q
    |||||||||||||||| ||||| | ||||||||||| |||||||||    
T  24489560 caacagtggtatcagaaccccgatccgacgaagggtacgaccgagg 24489515  T

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Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 26590970 - 26590909
Alignment:
Q  5 gtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtccccc 66  Q
    |||||||||||| ||||||||  || ||| |||||||||| |||||||||||| ||| ||||    
T  26590970 gtaagagtgtggcgtctctctcactagtgtggttgttctaacctcgatgtggatggttcccc 26590909  T

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Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 89
Target Start/End: Original strand, 35150810 - 35150886
Alignment:
Q  12 tgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacag 89  Q
    ||||||||||||||  || ||| | ||||| ||||||||||||||| ||||||||  ||||||| ||||| |||||||    
T  35150810 tgtggtgtctctctcactagtgtgattgttttagcctcgatgtggatggtcccccttgctcccc-catgacccaacag 35150886  T

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Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 88
Target Start/End: Complemental strand, 795141 - 795081
Alignment:
Q  29 ttgtgcggttgttctagcctcgatgtggacggt-cccccgcgctcccctcatgatccaaca 88  Q
    ||||| |||| || |||||||||||| |||||| |||||| ||||||||||||| ||||||    
T  795141 ttgtgtggttattttagcctcgatgtagacggttcccccgagctcccctcatgacccaaca 795081  T

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Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 13785692 - 13785632
Alignment:
Q  5 gtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccc 65  Q
    |||| |||||||||| ||||| | ||||  |||||||||| | ||||||||||||||||||    
T  13785692 gtaaaagtgtggtgtttctctcgtttgtatggttgttctaacttcgatgtggacggtcccc 13785632  T

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Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 320
Target Start/End: Original strand, 15370380 - 15370408
Alignment:
Q  292 gatggactcacacttgagggggagtgttg 320  Q
    |||||||||||||||||||||||||||||    
T  15370380 gatggactcacacttgagggggagtgttg 15370408  T

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Target: chr4 (Bit Score: 119; Significance: 9e-61; HSPs: 75)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 3340901 - 3341083
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagag 100  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| || | |||||||   ||| ||||||||||||||||||    
T  3340901 ttgggtaagagtgtggtgtctttcttgcttgtggggttgttctagcctcgatgtggacggtctcctgagctcccccagtgacccaacagtggtatcagag 3341000  T
Q  101 ccccggttcgacgaagggtgcgaccgaggccgccggttagttgcgcagaaagcagcaacgacggtacaagcagcaagtggctc 183  Q
    ||||||||||||||| ||| ||||||||| ||| ||| ||||||||||||||||||||||||||||||| || ||||||||||    
T  3341001 ccccggttcgacgaacggtacgaccgaggtcgctggtcagttgcgcagaaagcagcaacgacggtacaaacaacaagtggctc 3341083  T

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Target: chr4; HSP #2
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 10246013 - 10246212
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctca-tgatccaacagtggtatcaga 99  Q
    |||||||||||||||||||||| |||||||||  ||||||||||||||||||||||||| ||||||  |||||||||  ||| |||||||||||||||||    
T  10246013 ttgggtaagagtgtggtgtctcccttgcttgtctggttgttctagcctcgatgtggacgctcccccaagctcccctcgctgacccaacagtggtatcaga 10246112  T
Q  100 gccccggttcgacgaagggtgcgaccgaggccgccggttagttgcgcagaaagcagcaacgacggtacaagcagcaagtggctccttgtacggcaacggc 199  Q
     ||||||||||| ||||||| |||| ||||||||| || ||||| |||||||||||||||||||||||||||| ||||||||| ||||| | ||||||||    
T  10246113 accccggttcgatgaagggtacgactgaggccgcctgtcagttgtgcagaaagcagcaacgacggtacaagcaacaagtggcttcttgtgcagcaacggc 10246212  T

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Target: chr4; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 318
Target Start/End: Original strand, 44621096 - 44621418
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagag 100  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||   |||||| ||||||||||||||||||||||||||    
T  44621096 ttgggtaagagtgtggtgtttctcttgcttgtgcggttattctagcctcgatgtggacggtccc---cgctcctctcatgatccaacagtggtatcagag 44621192  T
Q  101 ccccggttcgacgaagggtgcgaccgaggccgccggttag-ttgcgcagaaagcagcaacgacggtacaagcagcaagtggctccttgtacg-------- 191  Q
    ||| |||| |||||||||| |||||||| | ||||||  | || ||||||||||||||||| || |||||| ||   || | ||| | | ||            
T  44621193 ccctggtttgacgaagggtacgaccgagacagccggtccgttttcgcagaaagcagcaacggcgatacaagtag--tgtcggtccgttttcgcagaaagc 44621290  T
Q  192 -gcaacggcagtgcaagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttgagggggagcacgatgaat 290  Q
     ||||||||  | |||| ||||||||||| ||||  |||| ||||||||||  || |||  |||   ||||||||| ||||  |||||||||||||||||    
T  44621291 agcaacggcgatacaagtagtgtcggtccatttgcagagacaccagcaacgacgatacaaacaagtaaagagcttccgcttttgggggagcacgatgaat 44621390  T
Q  291 tgatggactcacacttgagggggagtgt 318  Q
    ||||||||||||||||||||||||||||    
T  44621391 tgatggactcacacttgagggggagtgt 44621418  T

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Target: chr4; HSP #4
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 41370451 - 41370637
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagag 100  Q
    |||||||||||||| |||||||||||||||| | |||||||||||||||||||||||||||||||||  || |||   ||| ||||||||| ||||||||    
T  41370451 ttgggtaagagtgtagtgtctctcttgcttgagtggttgttctagcctcgatgtggacggtcccccgaacttccccagtgacccaacagtgatatcagag 41370550  T
Q  101 ccccggttcgacgaagggtgcgaccgaggccgccggttagttgcgcagaaagcagcaacgacggtacaagcagcaagtggctccttgt 188  Q
    ||||  |||||||||||||||||||||||| ||||| | ||||| |||||||| |||||| ||||||||||||||||| |||||||||    
T  41370551 cccccattcgacgaagggtgcgaccgaggcagccgg-tcgttgcacagaaagccgcaacggcggtacaagcagcaagtagctccttgt 41370637  T

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Target: chr4; HSP #5
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 32 - 168
Target Start/End: Original strand, 45496675 - 45496812
Alignment:
Q  32 tgcggttgttctagcctcgatgtggacggtcccccgcgctcccctca-tgatccaacagtggtatcagagccccggttcgacgaagggtgcgaccgaggc 130  Q
    ||||||||||||||||||||||| ||||||||| || |||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  45496675 tgcggttgttctagcctcgatgtagacggtccctcgagctccccttactgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgaggc 45496774  T
Q  131 cgccggttagttgcgcagaaagcagcaacgacggtaca 168  Q
    ||||||| ||||||| ||||||||||||||||| ||||    
T  45496775 cgccggtcagttgcgtagaaagcagcaacgacgataca 45496812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 23817743 - 23817572
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtccccc-gcgctcccctc-atgatccaacagtggtatcag 98  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||   ||||||||| ||||||||||||||||||||     
T  23817743 ttgggtaagagtgtggtgtctctcttgctagtgtggttgttctagcctcgatgtggacggtcccccatagctcccctcgatgatccaacagtggtatcat 23817644  T
Q  99 agccccggttcgacgaagggtgcgaccgaggccgccggt-tagttgcgcagaaagcagcaacgacggtacaag 170  Q
    ||||||  ||||||||||||| ||| |||||| |||||| |  ||||||||||||||||||||||||||||||    
T  23817643 agcccc-attcgacgaagggtacgatcgaggcagccggtctgtttgcgcagaaagcagcaacgacggtacaag 23817572  T

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Target: chr4; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 20825930 - 20826104
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctc-atgatccaacagtggtatcaga 99  Q
    ||||||||||||||||||| |||||| ||| ||||||||||||||||| ||||||||| |||||||  |||||| || ||||||||||||||| ||||||    
T  20825930 ttgggtaagagtgtggtgtttctcttccttatgcggttgttctagccttgatgtggacagtcccccatgctcccttcaatgatccaacagtggcatcaga 20826029  T
Q  100 gccccggttcgacgaagggtgcgaccgaggccgccggt-tagttgcgcagaaagcagcaacgacggtacaagcag 173  Q
    |||||  ||||||||||||| |||||||||| ||||||  | |||||||||||||||||||| ||||||||||||    
T  20826030 gccccaattcgacgaagggtacgaccgaggcagccggtccatttgcgcagaaagcagcaacggcggtacaagcag 20826104  T

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Target: chr4; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 39404112 - 39404276
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctca-tgatccaacagtggtatcaga 99  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||||||||     
T  39404112 ttgggtaagagtgtggcgtctctcttgcttgtgtggttgttctagcctcgatgtggacggtcccccgagctcccctcactaatccaacagtggtatcag- 39404210  T
Q  100 gccccggttcgacgaagggtgcgaccgaggccgccggttag-ttgcgcagaaagcagcaacgacgg 164  Q
    | | | ||||||||||||||  ||||||||| ||||||  | ||||| ||||||||||||||||||    
T  39404211 gacactgttcgacgaagggtatgaccgaggcagccggtccgtttgcgtagaaagcagcaacgacgg 39404276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 44620753 - 44620880
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagag 100  Q
    ||||||||||||||||| ||||||||||||||||||||||| || |||||||||||||||||||||  |||||||||||||||||| |||||||||||||    
T  44620753 ttgggtaagagtgtggtttctctcttgcttgtgcggttgttatatcctcgatgtggacggtcccccaagctcccctcatgatccaatagtggtatcagag 44620852  T
Q  101 ccccggttcgacgaagggtgcgaccgagg 129  Q
    |||| ||||| | |||||| |||||||||    
T  44620853 cccc-gttcgtcaaagggtacgaccgagg 44620880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 49076893 - 49076766
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagag 100  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| | ||| ||||||||| ||||||||||||||||||    
T  49076893 ttgggttagagtgtggtgtctttcttgcttgtgcggttgttctagcctcgatgtggactgtcccctgagct-ccctcatgacccaacagtggtatcagag 49076795  T
Q  101 ccccggttcgacgaagggtgcgaccgaggc 130  Q
    |||| ||||||| |||||| | ||||||||    
T  49076794 cccc-gttcgacaaagggtactaccgaggc 49076766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 22028431 - 22028303
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtccccc-gcgctcccctca-tgatccaacagtggtatcag 98  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||   |||||||||| ||| |||||||||||||| |    
T  22028431 ttgggtaagagtgtggtgtctctcttgcttgtgaggttgttctagcctcaatgtggacggtcccccaaagctcccctcactgacccaacagtggtatcgg 22028332  T
Q  99 agccccggttcgacgaagggtgcgaccgag 128  Q
    |||||| ||||||||||||||  |||||||    
T  22028331 agcccc-gttcgacgaagggtatgaccgag 22028303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 16889598 - 16889429
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagag 100  Q
    |||||||||||| ||||||||||||| |||||| | |||||||| ||||||||||||||||||| || ||||||| | ||| |||||| ||||| |||||    
T  16889598 ttgggtaagagtatggtgtctctcttccttgtgtgattgttctaacctcgatgtggacggtccctcgagctccccacgtgacccaacaatggtaccagag 16889499  T
Q  101 ccccggttcgacgaagggtgcgaccgaggccgccggttag-ttgcgcagaaagcagcaacgacggtacaag 170  Q
     ||| |||||||||||||| |||| |||||  |||||  | ||| |||||||||||||||| |||||||||    
T  16889498 -ccctgttcgacgaagggtacgactgaggcaaccggtccgtttgtgcagaaagcagcaacggcggtacaag 16889429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 195 - 320
Target Start/End: Original strand, 39404273 - 39404392
Alignment:
Q  195 acggcagtgcaagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttgagggggagcacgatgaattgat 294  Q
    |||||||||||||||||||||||||||||| |||||||||| |||||| || |||     |||||||||||| ||||||||| |||||||||||||||||    
T  39404273 acggcagtgcaagcagtgtcggtccgtttgcggagaaaccatcaacggcgataca-----agtaagagcttccgcttgagggagagcacgatgaattgat 39404367  T
Q  295 ggactcacacttgagggggagtgttg 320  Q
    ||||| |||||||||| |||||||||    
T  39404368 ggact-acacttgaggaggagtgttg 39404392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 25483430 - 25483534
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagag 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||  |||||||   ||| ||||||||||||||| ||    
T  25483430 ttgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggacggtctccctggctcccccagtgacccaacagtggtatcatag 25483529  T
Q  101 ccccg 105  Q
    |||||    
T  25483530 ccccg 25483534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 31691246 - 31691415
Alignment:
Q  1 ttgggtaagagtgtggtgtct--ctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcag 98  Q
    |||||||||||||||| ||||  ||||||||||| || ||||||||||||||||||||||| |||  || |||||||  |||| ||||||||||||| ||    
T  31691246 ttgggtaagagtgtggcgtctatctcttgcttgtacgattgttctagcctcgatgtggacgatccttcgagctcccccaatgacccaacagtggtattag 31691345  T
Q  99 agccccggttcgacgaagggtgcgaccgaggccgccggttag-ttgcgcagaaagcagcaacgacggtacaa 169  Q
    |||||  ||| |||||||||| ||||||||||||| |||  | ||||||||||| ||||||  |||||||||    
T  31691346 agccc--gtttgacgaagggtacgaccgaggccgctggtccgtttgcgcagaaaacagcaaaaacggtacaa 31691415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 39792922 - 39792842
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatga 81  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | | |||||||||||||    
T  39792922 ttgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggacggtcctctgagctcccctcatga 39792842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 43174235 - 43174405
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccc-tcatgatcc-aacagtggtatcag 98  Q
    |||||||||||||||||||||||||  |||||| |||||||| ||||| |||||||||||||||||| ||||||| |||  | || |||||||||||||     
T  43174235 ttgggtaagagtgtggtgtctctctcacttgtgtggttgttcaagccttgatgtggacggtcccccgagctccccctcacaaacccaacagtggtatcaa 43174334  T
Q  99 agccccggttcgacgaagggtgcgaccgaggccgccggttagtt-gcgcagaaagcagcaacgacggtacaa 169  Q
    ||| ||| ||||||||| |||  || |||||| ||||||  ||| |||||||||| ||||||||||||||||    
T  43174335 agcaccg-ttcgacgaaaggtaagatcgaggcagccggtccgtttgcgcagaaagtagcaacgacggtacaa 43174405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 19895406 - 19895506
Alignment:
Q  17 tgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaag 116  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||   ||||||| ||||| |||||||||||||||||||  |||||||||||||    
T  19895406 tgtctctcttgcttgtgcggttgttctagcctcgatgtgg-tggtccccatagctccccccatgacccaacagtggtatcagagcttcggttcgacgaag 19895504  T
Q  117 gg 118  Q
    ||    
T  19895505 gg 19895506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 36629331 - 36629408
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctca 78  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |  ||||||||||    
T  36629331 ttgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggacggtcccacatgctcccctca 36629408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 50002520 - 50002625
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctca-tgatccaacagtggtatcaga 99  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||  |  |||| | ||| |||||| ||||||||||    
T  50002520 ttgggtaagagtgtggtgtctctcttacttgtgcggttgttctagcctcgatgtgggcggtcccccgaaccaccctaagtgacccaacaatggtatcaga 50002619  T
Q  100 gccccg 105  Q
    ||||||    
T  50002620 gccccg 50002625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 204 - 320
Target Start/End: Original strand, 54108796 - 54108912
Alignment:
Q  204 caagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttga-gggggagcacgatgaattgatggactcac 302  Q
    |||| ||||||||| |||||||||||||||||||||||| || ||| |||| ||||||||||| |||||| ||||||||| |||||||| || |||||||    
T  54108796 caagtagtgtcggttcgtttgtggagaaaccagcaacggcgatacaagcaa-gtaagagcttccgcttgaagggggagcatgatgaattaatagactcac 54108894  T
Q  303 acttgagggggagtgttg 320  Q
    |||| |||||||||||||    
T  54108895 acttaagggggagtgttg 54108912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 5 - 169
Target Start/End: Original strand, 2740798 - 2740953
Alignment:
Q  5 gtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagcccc 104  Q
    |||||||||||| ||||||||  ||||||  ||||||||||||||||| |||| ||||||||| ||||||||||       |||||||||||||||||||    
T  2740798 gtaagagtgtggcgtctctctcacttgtg--gttgttctagcctcgatatggatggtcccccgagctcccctca-------acagtggtatcagagcccc 2740888  T
Q  105 ggttcgacgaagggtgcgaccgaggccgccggttag-ttgcgcagaaagcagcaacgacggtacaa 169  Q
     |||||||||||||| |||||||||| |||| |  | |||||||||||||||||||  ||||||||    
T  2740889 -gttcgacgaagggtacgaccgaggcagccgatccgtttgcgcagaaagcagcaacagcggtacaa 2740953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 210 - 319
Target Start/End: Original strand, 2740956 - 2741067
Alignment:
Q  210 gtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttga--gggggagcacgatgaattgatggactcacacttg 307  Q
    |||||||||||||||  |||||||||||||||| || ||  |||||||||||||||| ||||||  ||| ||||| ||||||||||||||||||||||||    
T  2740956 gtgtcggtccgtttgcagagaaaccagcaacggcgatacgagcaaagtaagagcttccgcttgaaggggagagcatgatgaattgatggactcacacttg 2741055  T
Q  308 agggggagtgtt 319  Q
    | ||||||||||    
T  2741056 aaggggagtgtt 2741067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 192 - 319
Target Start/End: Original strand, 20826086 - 20826213
Alignment:
Q  192 gcaacggcagtgcaagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttga-gggggagcacgatgaat 290  Q
    |||||||| || |||||||||| | |||||||| ||||||||||||||||| || ||| |||| |||| ||| || |||||| ||||||||| |||||||    
T  20826086 gcaacggcggtacaagcagtgttgatccgtttgcggagaaaccagcaacggcgatacaagcaa-gtaatagcgtccgcttgaagggggagcatgatgaat 20826184  T
Q  291 tgatggactcacacttgagggggagtgtt 319  Q
     ||||||||||||||||||||||||||||    
T  20826185 agatggactcacacttgagggggagtgtt 20826213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 93 - 188
Target Start/End: Complemental strand, 18933102 - 18933008
Alignment:
Q  93 tatcagagccccggttcgacgaagggtgcgaccgaggccgccggttagttgcgcagaaagcagcaacgacggtacaagcagcaagtggctccttgt 188  Q
    |||||||||||||||||||||||| ||||||||||||| ||||| | |||| ||||||||  |||||| |||||||||||||||||||||||||||    
T  18933102 tatcagagccccggttcgacgaagtgtgcgaccgaggcagccgg-tggttgtgcagaaagtcgcaacggcggtacaagcagcaagtggctccttgt 18933008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 44620447 - 44620568
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagag 100  Q
    ||||||||||||||| ||| ||||||||||||| |||||||||| ||| ||||||||||||||||   ||||| ||||||||||||||||||||||        
T  44620447 ttgggtaagagtgtgatgtttctcttgcttgtgtggttgttctaaccttgatgtggacggtcccc---gctcctctcatgatccaacagtggtatc---- 44620539  T
Q  101 ccccggttcgacgaagggtgcgaccgaggc 130  Q
     || ||||||||||||||| | ||||||||    
T  44620540 -cctggttcgacgaagggtacaaccgaggc 44620568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 192 - 320
Target Start/End: Complemental strand, 16889444 - 16889315
Alignment:
Q  192 gcaacggcagtgcaagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttgagggggagcacgatgaat- 290  Q
    |||||||| || |||| |||||| ||||||||| ||||||||||||||||  || |||  |||   ||||||||| ||||||||||||||||||| ||      
T  16889444 gcaacggcggtacaagtagtgtccgtccgtttgaggagaaaccagcaacgacgatacaaacaagtaaagagcttccgcttgagggggagcacgattaaag 16889345  T
Q  291 tgatggactcacacttgagggggagtgttg 320  Q
    ||||||||||||||||||||||||||||||    
T  16889344 tgatggactcacacttgagggggagtgttg 16889315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 43827533 - 43827610
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctca 78  Q
    |||| ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| ||| ||||||    
T  43827533 ttggataagagtgtggtgtctctcttacttgtgcggttgttctaacctcgatgtggacggtcccccgagcttccctca 43827610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 50630817 - 50630740
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctca 78  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| ||  ||||||||||    
T  50630817 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttttagcctcgatgtgggcggtccgcctagctcccctca 50630740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 36608723 - 36608636
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaaca 88  Q
    |||||||||||||||||||||||||  || ||| ||||||||||||||||||||||||||||||||  ||||||||| ||| ||||||    
T  36608723 ttgggtaagagtgtggtgtctctctcactagtgtggttgttctagcctcgatgtggacggtcccccaagctcccctcgtgacccaaca 36608636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 54108631 - 54108799
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtccccc-gcgctcccctcatgatccaacagtggtatcaga 99  Q
    |||| |||||||||||||||| ||||||||||| ||||||||||||||| |||||| |||||||||   |||||||   ||| ||||||| |||||||||    
T  54108631 ttggctaagagtgtggtgtctatcttgcttgtgtggttgttctagcctcaatgtgg-cggtcccccatagctcccccagtgacccaacagcggtatcaga 54108729  T
Q  100 gccccggttcgacgaagggtgcgaccgaggccgccggttag-ttgcgcagaaagcagcaacgacggtacaag 170  Q
    ||| | |||||||||||||| ||| |||||| ||||||  | ||||||| |||||||||| | |||||||||    
T  54108730 gccac-gttcgacgaagggtacga-cgaggcagccggtccgtttgcgcataaagcagcaatggcggtacaag 54108799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 54343070 - 54343004
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccg 67  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||    
T  54343070 ttgggtaagagtgtggtgtctctcttgcttgagtggttgttctagcctcgatgtggatggtcccccg 54343004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 55933186 - 55933121
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtccccc 66  Q
    |||||||||||||||||||||||||| ||||| | |||||||||||||||||||||||||||||||    
T  55933186 ttgggtaagagtgtggtgtctctcttacttgtacagttgttctagcctcgatgtggacggtccccc 55933121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 1731709 - 1731646
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtccc 64  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||||||||    
T  1731709 ttgggtaagagtgtggtgtttctcttgcttgtgtggttgttctagcctcaatgtggacggtccc 1731646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 54109006 - 54109060
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtg 55  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  54109006 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcttcgatgtg 54109060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 32941185 - 32941128
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggac 58  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  32941185 ttgggtaagagtgtgacgtctctcttgcttgtgcggttgttctagcctcgatgtggac 32941128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 21 - 81
Target Start/End: Complemental strand, 11702341 - 11702281
Alignment:
Q  21 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatga 81  Q
    ||||||||||||||||||||||||||||||||||| || ||||||| ||||||||||||||    
T  11702341 tctcttgcttgtgcggttgttctagcctcgatgtgaacagtccccctcgctcccctcatga 11702281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 50459818 - 50459878
Alignment:
Q  4 ggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtccc 64  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  50459818 ggtaagagcgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtgcacggtccc 50459878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 52884792 - 52884844
Alignment:
Q  3 gggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtg 55  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  52884792 gggtaagagtgtggtgtctctcttgcttgtgcggttgatctagcctcgatgtg 52884844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 39404492 - 39404555
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtccc 64  Q
    ||||| |||| |||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  39404492 ttgggcaagaatgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtgaacggtccc 39404555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 75
Target Start/End: Complemental strand, 54017654 - 54017583
Alignment:
Q  4 ggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccc 75  Q
    |||||||||||| |||||||||||||| || |||||||||||||||||||||||||||| |||  |||||||    
T  54017654 ggtaagagtgtgatgtctctcttgcttatgtggttgttctagcctcgatgtggacggtctccctagctcccc 54017583  T

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Target: chr4; HSP #42
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 6 - 88
Target Start/End: Complemental strand, 34004642 - 34004560
Alignment:
Q  6 taagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaaca 88  Q
    ||||||||||  ||||||||  |||||||||||||||||||||||||||| |||||| |||| ||||| ||||||| ||||||    
T  34004642 taagagtgtgccgtctctctcccttgtgcggttgttctagcctcgatgtgaacggtctcccgagctcctctcatgacccaaca 34004560  T

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Target: chr4; HSP #43
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 4390163 - 4390102
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtc 62  Q
    |||||||||||||||  ||||||||||||||||| |||||||||||||||||| ||||||||    
T  4390163 ttgggtaagagtgtgacgtctctcttgcttgtgcagttgttctagcctcgatgcggacggtc 4390102  T

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Target: chr4; HSP #44
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 22183326 - 22183261
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtccccc 66  Q
    |||| ||||||||||| ||||||||  ||||| |||||||||||||||||||||||||||||||||    
T  22183326 ttggataagagtgtggcgtctctctcacttgtacggttgttctagcctcgatgtggacggtccccc 22183261  T

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Target: chr4; HSP #45
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 22028023 - 22027935
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacag 89  Q
    |||||||||| |||||||||||||| |||| || ||||||| ||| |||||||||||| ||||| |  ||||||||||||| |||||||    
T  22028023 ttgggtaagaatgtggtgtctctctcgcttatgtggttgttttagtctcgatgtggacagtccctcaggctcccctcatgacccaacag 22027935  T

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Target: chr4; HSP #46
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 36572113 - 36572177
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccc 65  Q
    |||||| ||||| |||||||||||| |||||||||||||||| |||||||||||| |||||||||    
T  36572113 ttgggttagagtatggtgtctctctcgcttgtgcggttgttcaagcctcgatgtgaacggtcccc 36572177  T

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Target: chr4; HSP #47
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 258 - 318
Target Start/End: Original strand, 44620592 - 44620652
Alignment:
Q  258 aagagcttctgcttgagggggagcacgatgaattgatggactcacacttgagggggagtgt 318  Q
    ||||||||| ||||  ||||||||||||||||||||||||||||||||||||| |||||||    
T  44620592 aagagcttccgcttttgggggagcacgatgaattgatggactcacacttgaggtggagtgt 44620652  T

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Target: chr4; HSP #48
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 18879900 - 18879987
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaaca 88  Q
    |||||||||||||||  |||||| ||| ||||| |||||||||||| |||||||||||||||| ||| |||||||  |||| ||||||    
T  18879900 ttgggtaagagtgtgacgtctcttttggttgtgtggttgttctagcttcgatgtggacggtcctccgagctcccccaatgacccaaca 18879987  T

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Target: chr4; HSP #49
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 18932808 - 18932745
Alignment:
Q  4 ggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccg 67  Q
    ||||||||||||||||||||||| |||| | ||||||| ||||||||||||| |||||||||||    
T  18932808 ggtaagagtgtggtgtctctcttacttgagtggttgttatagcctcgatgtgtacggtcccccg 18932745  T

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Target: chr4; HSP #50
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 192 - 313
Target Start/End: Complemental strand, 45489622 - 45489501
Alignment:
Q  192 gcaacggcagtgcaagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttgagggggagcacgatg-aat 290  Q
    |||||||| || |||| |||||||||||||||| |||||| |||||||  | || ||| || ||||||||||||| |||||| | |||||| |||| ||     
T  45489622 gcaacggcggtacaagaagtgtcggtccgtttgcggagaacccagcaatagcgatacaagc-aagtaagagcttccgcttgaagaggagcatgatgaaaa 45489524  T
Q  291 tgatggactcacacttgaggggg 313  Q
     ||||||||||||||||||||||    
T  45489523 cgatggactcacacttgaggggg 45489501  T

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Target: chr4; HSP #51
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 210 - 320
Target Start/End: Complemental strand, 49076722 - 49076610
Alignment:
Q  210 gtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttg-agggggagcacgatg--aattgatggactcacactt 306  Q
    ||||||||||||||||||||||||||||||||   | ||| || ||||||||| ||| ||||| ||||||| || ||||  || ||||||||||||||||    
T  49076722 gtgtcggtccgtttgtggagaaaccagcaacgacaatacaagc-aagtaagagtttccgcttgaagggggaacatgatgaaaagtgatggactcacactt 49076624  T
Q  307 gagggggagtgttg 320  Q
    |||| |||||||||    
T  49076623 gaggaggagtgttg 49076610  T

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Target: chr4; HSP #52
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 54936290 - 54936363
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccc 75  Q
    |||||||||||||||||||||||||  ||  || |||||||||||||||||||||||| |||||||| |||||||    
T  54936290 ttgggtaagagtgtggtgtctctctcacta-tgtggttgttctagcctcgatgtggacagtcccccgagctcccc 54936363  T

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Target: chr4; HSP #53
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 204 - 304
Target Start/End: Complemental strand, 22028263 - 22028163
Alignment:
Q  204 caagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttg-agggggagcacgatgaattgatggactcac 302  Q
    |||| |||||||||||||||| ||||||||||||||||  ||  || || ||||||||||||  ||||| |||||||||||||||||  |||||||||||    
T  22028263 caagtagtgtcggtccgtttgcggagaaaccagcaacgacgattcaagc-aagtaagagctttcgcttgaagggggagcacgatgaaaagatggactcac 22028165  T
Q  303 ac 304  Q
    ||    
T  22028164 ac 22028163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 16888878 - 16888814
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccc 65  Q
    ||||||||||||||| ||||||||||| ||||||| |||||||||  ||||||| ||||||||||    
T  16888878 ttgggtaagagtgtgatgtctctcttgtttgtgcgattgttctagtttcgatgtagacggtcccc 16888814  T

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Target: chr4; HSP #55
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 19504790 - 19504842
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatg 53  Q
    |||||||||||||||| |||| ||||||||||| |||||||||||||||||||    
T  19504790 ttgggtaagagtgtggcgtctatcttgcttgtgtggttgttctagcctcgatg 19504842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 20826314 - 20826370
Alignment:
Q  4 ggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacgg 60  Q
    |||||||||||| |||||||||| ||| |||| ||||||||||||||||||||||||    
T  20826314 ggtaagagtgtgatgtctctcttccttatgcgattgttctagcctcgatgtggacgg 20826370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 49076499 - 49076439
Alignment:
Q  15 ggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccc 75  Q
    ||||||| ||| |||| |||| ||||| |||||||||||||||||||||||||||||||||    
T  49076499 ggtgtctgtctcgcttatgcgattgttatagcctcgatgtggacggtcccccgcgctcccc 49076439  T

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Target: chr4; HSP #58
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 49303000 - 49303064
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccc 65  Q
    ||||||||||||||||||| |||||| ||| |||| |||||||| |||||||||||||| |||||    
T  49303000 ttgggtaagagtgtggtgtatctcttacttatgcgattgttctatcctcgatgtggacgatcccc 49303064  T

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Target: chr4; HSP #59
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 34646711 - 34646648
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtccc 64  Q
    ||||||||||||||||||||||||| |  |||| |||||||||||||| | |||||||||||||    
T  34646711 ttgggtaagagtgtggtgtctctctggtctgtgtggttgttctagccttgttgtggacggtccc 34646648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 45489776 - 45489650
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagag 100  Q
    |||||||| |||||||||||||||| |||||   ||||||||||| |||||||||| || ||||||   |||| |   ||| |||||| |||||||||||    
T  45489776 ttgggtaatagtgtggtgtctctctcgcttgcatggttgttctagtctcgatgtggccgatcccccaaactcctccagtgacccaacaatggtatcagag 45489677  T
Q  101 ccccggttcgacgaagggtgcgaccgag 128  Q
     ||| ||| |||||||||| ||||||||    
T  45489676 tccc-gtttgacgaagggtacgaccgag 45489650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 11783615 - 11783498
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagag 100  Q
    |||||||||||||||  || ||||| ||||||   |||| |||||||| |||||||  ||||||||  || |||||||||| ||||||||||||||| ||    
T  11783615 ttgggtaagagtgtgtcgtttctctcgcttgtatagttgctctagcctagatgtgggtggtccccctggcacccctcatgacccaacagtggtatcaaag 11783516  T
Q  101 ccccggttcgacgaagggt 119  Q
     | |||||| |||||||||    
T  11783515 -ctcggttccacgaagggt 11783498  T

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Target: chr4; HSP #62
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 259 - 320
Target Start/End: Original strand, 36629172 - 36629234
Alignment:
Q  259 agagcttctgcttgaggg-ggagcacgatgaattgatggactcacacttgagggggagtgttg 320  Q
    |||||||| |||||| || |||||| ||||||||||||| |||||||||||||||||||||||    
T  36629172 agagcttccgcttgaaggtggagcatgatgaattgatgggctcacacttgagggggagtgttg 36629234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 39699002 - 39698918
Alignment:
Q  5 gtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacag 89  Q
    |||||||||| |  |||||||||||||||||||| |||||| |||||||||||| ||||   | |||| |||||| |||||||||    
T  39699002 gtaagagtgtagcatctctcttgcttgtgcggttattctagtctcgatgtggacagtcctatgagctctcctcatcatccaacag 39698918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 45489391 - 45489331
Alignment:
Q  4 ggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtccc 64  Q
    |||||||||||| ||||||| ||||| ||| | ||||||||||||||||||||| ||||||    
T  45489391 ggtaagagtgtgatgtctcttttgctagtgtgattgttctagcctcgatgtggatggtccc 45489331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 4955379 - 4955332
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcct 48  Q
    |||||||||||||||| ||||||||| |||||||||||| ||||||||    
T  4955379 ttgggtaagagtgtggcgtctctcttacttgtgcggttgctctagcct 4955332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 23817498 - 23817457
Alignment:
Q  20 ctctcttgcttgtgcggttgttctagcctcgatgtggacggt 61  Q
    |||||||||| ||| |||||||||||||||||||||||||||    
T  23817498 ctctcttgctagtgtggttgttctagcctcgatgtggacggt 23817457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 88 - 168
Target Start/End: Complemental strand, 50627748 - 50627668
Alignment:
Q  88 agtggtatcagagccccggttcgacgaagggtgcgaccgaggccgccggttag-ttgcgcagaaagcagcaacgacggtaca 168  Q
    ||||||||||||||||| ||||||| |||||| ||| |||||| ||||||| | |||| |||||||||||| || |||||||    
T  50627748 agtggtatcagagcccc-gttcgacaaagggtacgatcgaggcagccggttcgtttgcacagaaagcagcagcggcggtaca 50627668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 101
Target Start/End: Complemental strand, 27426803 - 27426771
Alignment:
Q  69 gctcccctcatgatccaacagtggtatcagagc 101  Q
    |||||||||||||||||||||||||||||||||    
T  27426803 gctcccctcatgatccaacagtggtatcagagc 27426771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 305
Target Start/End: Complemental strand, 41707392 - 41707340
Alignment:
Q  254 aagtaagagcttctgcttga-gggggagcacgatgaattgatggactcacact 305  Q
    |||||||||||||  ||||| ||||||||| ||||||||||||||||||||||    
T  41707392 aagtaagagcttccccttgaagggggagcatgatgaattgatggactcacact 41707340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 43174601 - 43174661
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggt 61  Q
    |||||||||||||||| |||||||||| || |  ||||||| |||||| ||||||||||||    
T  43174601 ttgggtaagagtgtggcgtctctcttgtttatatggttgttgtagccttgatgtggacggt 43174661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 45496899 - 45496931
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtg 33  Q
    |||||||||||||||||||||||||||||||||    
T  45496899 ttgggtaagagtgtggtgtctctcttgcttgtg 45496931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 311
Target Start/End: Original strand, 5882092 - 5882122
Alignment:
Q  281 cacgatgaattgatggactcacacttgaggg 311  Q
    |||||||||||||||||||||||||||||||    
T  5882092 cacgatgaattgatggactcacacttgaggg 5882122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 313
Target Start/End: Complemental strand, 18932983 - 18932926
Alignment:
Q  257 taagagcttctgcttga-gggggagcacgatgaattgatggactcacacttgaggggg 313  Q
    |||||| ||| |||||| ||||||||| ||||||| ||| ||||||||||||||||||    
T  18932983 taagagtttccgcttgaagggggagcatgatgaatagatagactcacacttgaggggg 18932926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 61
Target Start/End: Original strand, 41370763 - 41370812
Alignment:
Q  12 tgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggt 61  Q
    |||| |||||||||| |||| | |||||||||| ||||||||||||||||    
T  41370763 tgtgatgtctctcttacttgagtggttgttctaacctcgatgtggacggt 41370812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 278
Target Start/End: Original strand, 43174405 - 43174477
Alignment:
Q  205 aagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttgaggggg 278  Q
    |||||||||||||| ||||| |||||||||| |||||| || |||  | ||||||||||||| |||||| ||||    
T  43174405 aagcagtgtcggtctgtttgcggagaaaccaacaacggcgatacaaac-aagtaagagcttccgcttgaagggg 43174477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 116; Significance: 6e-59; HSPs: 68)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 7 - 169
Target Start/End: Complemental strand, 44290882 - 44290720
Alignment:
Q  7 aagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctca-tgatccaacagtggtatcagagccccg 105  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || ||| |||||||||||||||||||||||    
T  44290882 aagagtgtggtgtatctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgagctccccccactgacccaacagtggtatcagagccccg 44290783  T
Q  106 gttcgacgaagggtgcgaccgaggccgccggttagttgcgcagaaagcagcaacgacggtacaa 169  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||  |||||||    
T  44290782 gttcgacgaagggtgcgaccgaggcagccggtt-gttgcgcagaaagccgcaacggtggtacaa 44290720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 50052087 - 50051902
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagag 100  Q
    ||||||||||||||||||||||||||| || || | |||||||| ||||||||||||| |||||||| ||||||||| ||| ||||||||||||||||||    
T  50052087 ttgggtaagagtgtggtgtctctcttgtttatgtg-ttgttctaacctcgatgtggacagtcccccgagctcccctcgtgacccaacagtggtatcagag 50051989  T
Q  101 ccccggttcgacgaagggtgcgaccgaggccgccggttagttgcgcagaaagcagcaacgacggtacaagcagcaagtggctccttgt 188  Q
    |||||||||||| ||||| ||||||||||| ||||| | |||| ||||||||| |||||||| |||||||||||||||||||||||||    
T  50051988 ccccggttcgacaaagggcgcgaccgaggcagccgg-tggttgggcagaaagccgcaacgacagtacaagcagcaagtggctccttgt 50051902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 11977038 - 11977224
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctca-tgatccaaca--gtggtatca 97  Q
    ||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||| ||||| ||   ||| | ||||  |||| ||||    
T  11977038 ttgggtaagagtgtggtgtctctcttgcaagtgcggtagttctagcctcgatgtggacggtcccccgagctcctctttgtgacctaacaaagtggcatca 11977137  T
Q  98 gagccccggttcgacgaagggtgcgaccgaggccgccggttagttgcgcagaaagcagcaacgacggtacaagcagcaagtggctcct 185  Q
    |||||| |||| |||||||||| |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  11977138 gagccc-ggtttgacgaagggtacgaccgaggccgtcggtcagttgcgcagaaagcagcaacgacggtacaagcagcaagtggctcct 11977224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 26661962 - 26661766
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagag 100  Q
    ||||||||||||||||||||||||||||||||| |||||||| | ||| |||| ||| |||| |||  ||||||||| ||| |||| |||||||| |||     
T  26661962 ttgggtaagagtgtggtgtctctcttgcttgtgtggttgttcaatccttgatgcggatggtctccctagctcccctcgtgacccaaaagtggtattagaa 26661863  T
Q  101 ccccggttcgacgaagggtgcgaccgaggccgccggttagttgcgcagaaagcagcaacgacggtacaagcagcaagtggctccttgtacggcaacg 197  Q
    || || ||||||||||||| |||||||||||||| || | |||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||    
T  26661862 cctcgattcgacgaagggtacgaccgaggccgccagtcaattgcgcagaaagcagcaacgacggtacaagcaacaagtggctccttgtgcagcaacg 26661766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 48588552 - 48588364
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtc-ccccgcgctcccctca-tgatccaacagtggtatcag 98  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| |||   | |||||||| ||| |||| |||||||||||    
T  48588552 ttgggtaagagtgcggtgtctctcttacttgtgcggttgttctagcctcgatgtggacggtcgcccaaagttcccctcactgaaccaaaagtggtatcag 48588453  T
Q  99 agccccggttcgacgaagggtgcgaccgaggccgccggttagttgcgcagaaagcagcaacgacggtacaagcagcaagtggctccttgt 188  Q
    || |||||||| ||||||||||| |||||||| ||||||| |||||||||||||| ||||||||| ||||| || |||||||||||||||    
T  48588452 agtcccggttcaacgaagggtgcaaccgaggcagccggtt-gttgcgcagaaagccgcaacgacgatacaaacaacaagtggctccttgt 48588364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 34649532 - 34649705
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtccccc-gcgctcccctcatgatccaacagtggtatcaga 99  Q
    ||||||||||||| || |||||||||||| ||| |||||||||||||||||||||||||||||||| | ||| ||||  ||| |||||||||||||||||    
T  34649532 ttgggtaagagtgaggcgtctctcttgctagtgtggttgttctagcctcgatgtggacggtcccccggagcttccctagtgacccaacagtggtatcaga 34649631  T
Q  100 gccccggttcgacgaagggtgcgaccgaggccgccggttag-ttgcgcagaaagcagcaacgacggtacaagcag 173  Q
    ||||| |||||| ||||||| |||||||||| ||||||  | |||||||||||||| ||||||||||||||||||    
T  34649632 gcccc-gttcgatgaagggtacgaccgaggcagccggtccgtttgcgcagaaagcaacaacgacggtacaagcag 34649705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 56 - 188
Target Start/End: Complemental strand, 48588870 - 48588739
Alignment:
Q  56 gacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtgcgaccgaggccgccggttagttgcgcagaaagcag 155  Q
    |||||||||||  |||||||||||||||||||| || |||||||||||||||||||||||||||||||| ||||| |||||| | ||| ||||||||| |    
T  48588870 gacggtccccctagctcccctcatgatccaacaatgatatcagagccccggttcgacgaagggtgcgactgaggcagccggtca-ttgtgcagaaagctg 48588772  T
Q  156 caacgacggtacaagcagcaagtggctccttgt 188  Q
    |||||||||||||||||||||||||||||||||    
T  48588771 caacgacggtacaagcagcaagtggctccttgt 48588739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 22077559 - 22077392
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagag 100  Q
    |||||||||||||||| ||||||||  ||| ||||||||||| ||| ||||| |||||||||||||  ||||||||  ||| |||||||||| |||||||    
T  22077559 ttgggtaagagtgtggcgtctctctcacttatgcggttgttcaagcatcgatatggacggtcccccaggctccccttgtgacccaacagtggcatcagag 22077460  T
Q  101 ccccggttcgacgaagggtgcgaccgaggccgccggttagttgcgcagaaagcagcaacgacggtaca 168  Q
    ||| ||||||||||||||| ||||| |||| ||||||  |||||| ||||| ||||||||||||||||    
T  22077459 cccaggttcgacgaagggtacgaccaaggcagccggtccgttgcggagaaaccagcaacgacggtaca 22077392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 320
Target Start/End: Original strand, 34364601 - 34364919
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagag 100  Q
    ||||||||||||||| ||||||||| |||| |||||||| ||||||||||||||||| ||| ||| | |||||||   ||| ||||||||||||||||||    
T  34364601 ttgggtaagagtgtgatgtctctctcgcttatgcggttgctctagcctcgatgtggatggttccctgagctcccccagtgacccaacagtggtatcagag 34364700  T
Q  101 ccccggttcgacgaagggtgcgaccgaggccgccggttag-ttgcgcagaaagcagcaacgacggtacaagcagcaagtggctcc-ttgtacggcaacgg 198  Q
    ||||||||||||||||||| ||||| || | ||||||  | ||| |||||||||||||||| || |||||| ||   || | ||| ||   |  ||||||    
T  34364701 ccccggttcgacgaagggtacgacccagacagccggtccgtttgtgcagaaagcagcaacggcgatacaagtag--tgtcggtccgttaaccaacaacgg 34364798  T
Q  199 cagtgcaagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttgagggggagcacgatg-aattgatgga 297  Q
       | ||||||   ||| |||||||| ||| ||||||||||| | |||||| || ||||||||||||| | ||||||||||||| |||| ||  ||||||    
T  34364799 tgatacaagca-catcgatccgtttgcggaaaaaccagcaacagcgacacaagc-aagtaagagcttccgattgagggggagcatgatgaaaaagatgga 34364896  T
Q  298 ctcacacttgagggggagtgttg 320  Q
    |||||||||||||||||||||||    
T  34364897 ctcacacttgagggggagtgttg 34364919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 66536 - 66366
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagag 100  Q
    |||||||||||| | | |||||||| ||||||||||||||||||||||| |||||||||||   ||  ||||||||||||| ||||||||| ||||||||    
T  66536 ttgggtaagagtatagcgtctctctcgcttgtgcggttgttctagcctcaatgtggacggttatccaagctcccctcatgacccaacagtgatatcagag 66437  T
Q  101 ccccggttcgacgaagggtgcgaccgaggccgccggttagttgcgcagaaagcagcaacgacggtacaagc 171  Q
     |||||||||||||||||| |||||||||| ||||||  |||||| ||||| || ||||| ||||| ||||    
T  66436 tcccggttcgacgaagggtacgaccgaggcagccggtccgttgcggagaaaccaacaacggcggtataagc 66366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 31767225 - 31767097
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagag 100  Q
    |||||||||||||||  |||| ||||||||||| ||||||||||| ||||||||||||||||||||  ||| ||||||||| ||||||||||||||||||    
T  31767225 ttgggtaagagtgtgacgtctatcttgcttgtgtggttgttctagactcgatgtggacggtcccccaagcttccctcatgacccaacagtggtatcagag 31767126  T
Q  101 ccccggttcgacgaagggtgcgaccgaggc 130  Q
    |||| |||||||||||||| ||||||||||    
T  31767125 cccc-gttcgacgaagggtacgaccgaggc 31767097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 9956003 - 9956129
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagag 100  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||  ||||||||   |||| |||| ||| ||||||||||||||||||    
T  9956003 ttgggtaagagtgtgatgtctctcttgcttgtgcggttgctctagcctcgatgtgagcggtcccctaggctctcctcgtgacccaacagtggtatcagag 9956102  T
Q  101 ccccggttcgacgaagggtgcgaccga 127  Q
    || |||||||||||||||| |||||||    
T  9956103 cctcggttcgacgaagggtacgaccga 9956129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 6 - 119
Target Start/End: Complemental strand, 37850659 - 37850547
Alignment:
Q  6 taagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccg 105  Q
    ||||||||||||||||||||  |||||||||||| ||||||||||||||||||||| ||||  |||||||||||||||||||  ||||||||||||||||    
T  37850659 taagagtgtggtgtctctctcacttgtgcggttgctctagcctcgatgtggacggt-cccctagctcccctcatgatccaactctggtatcagagccccg 37850561  T
Q  106 gttcgacgaagggt 119  Q
    ||||||| ||||||    
T  37850560 gttcgacaaagggt 37850547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 3 - 172
Target Start/End: Complemental strand, 22077891 - 22077722
Alignment:
Q  3 gggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagcc 102  Q
    |||||||||||||| |||||| |  ||| ||||||||||| ||| |||||||||||||||| ||  ||||||||  ||| |||||||||| |||||||||    
T  22077891 gggtaagagtgtggcgtctctttcacttatgcggttgttcaagcatcgatgtggacggtcctccaggctccccttgtgacccaacagtggcatcagagcc 22077792  T
Q  103 ccggttcgacgaagggtgcgaccgaggccgccggttagttgcgcagaaagcagcaacgacggtacaagca 172  Q
    | |||||||||||||||  |||| |||| ||||||  |||||| ||||| ||| ||||||| ||||||||    
T  22077791 caggttcgacgaagggtatgaccaaggcagccggtccgttgcggagaaaccagtaacgacgatacaagca 22077722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 37555823 - 37555990
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagag 100  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||| | || |||||||  |||| ||||||||||||||||||    
T  37555823 ttgggtaagagtgtggtgtctctcttgcttgtgtggttgttcaagcctcgatgtgg-cggtcgctcgagctcccccaatgacccaacagtggtatcagag 37555921  T
Q  101 ccccggttcgacgaagggtgcgaccgaggccgccggttag-ttgcgcagaaagcagcaacgacggtacaa 169  Q
    ||||  |||| ||||||||  || |||||| || |||  | ||||||| |||||||||||| ||||||||    
T  37555922 cccc-attcggcgaagggtatgatcgaggcagctggtccgattgcgcaaaaagcagcaacggcggtacaa 37555990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 41157085 - 41157257
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtccccc-gcgctcccc-tca-tgatccaacagtggtatca 97  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| |||||||||   ||||||| ||| ||| |||||| ||||||||    
T  41157085 ttgggtaagagtgtggtgtctctattgcttgtgtggttgttctagcctcgatgtgggcggtcccccaaggctccccttcagtgacccaacaatggtatca 41157184  T
Q  98 gagccccggttcgacgaagggtgcgaccgaggccgccggttag-ttgcgcagaaagcagcaacgacggtacaag 170  Q
    ||||||| ||||||| |||||| ||||| |||| | ||||  | ||||||| |||||| |||||||||||||||    
T  41157185 gagcccc-gttcgacaaagggtacgaccaaggcagtcggtccgtttgcgcataaagcaacaacgacggtacaag 41157257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 3537663 - 3537599
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccc 65  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  3537663 ttgggtaagagtgtggcgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccc 3537599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 41184475 - 41184341
Alignment:
Q  1 ttgggtaagagtgtggt---gtctctcttgcttgtgcggttgttctagcctcgatgtggacggtc-ccccgcgctcccctca-tgatccaacagtggtat 95  Q
    ||||||||||||||| |   ||| ||||| ||||||||||||||| ||||||||||| ||||||| ||||| |||||||||| |||||||||||||||||    
T  41184475 ttgggtaagagtgtgatattgtcgctcttacttgtgcggttgttccagcctcgatgtcgacggtccccccgagctcccctcactgatccaacagtggtat 41184376  T
Q  96 cagagccccggttcgacgaagggtgcgaccgaggc 130  Q
    ||||||||  | ||||||||||||  |||||||||    
T  41184375 cagagcccgagctcgacgaagggtaagaccgaggc 41184341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 45084470 - 45084557
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaaca 88  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||||||  ||| ||||||||| ||||||    
T  45084470 ttgggtaagagagtggtgtctctcttgcttgtgcggttgttctaacctcgatgcggacggtcccccaggcttccctcatgacccaaca 45084557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 17294671 - 17294773
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgc-ggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcaga 99  Q
    ||||||||||||||||||||||||| |||| ||| ||||| |||||||||||||||||||||| |||| ||||||||| ||| | |||||||| ||||||    
T  17294671 ttgggtaagagtgtggtgtctctctcgcttatgcaggttgctctagcctcgatgtggacggtcgcccgagctcccctcgtgacctaacagtggcatcaga 17294770  T
Q  100 gcc 102  Q
    |||    
T  17294771 gcc 17294773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 44290522 - 44290448
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccc 75  Q
    |||||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  44290522 ttgggtaagagtatggtgtctttcttgcttgtacggttgttctagcctcgatgtggacggtcccccgagctcccc 44290448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 32168762 - 32168698
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccc 65  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  32168762 ttgggtaagagtgtggcgtctctcttgcttgtgcggttgttctagcctcgatgtggacagtcccc 32168698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 205 - 320
Target Start/End: Original strand, 37555990 - 37556105
Alignment:
Q  205 aagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttg-agggggagcacgatgaattgatggactcaca 303  Q
    |||||||||||||||||||| ||||||||||||||||| || | | || ||||||||||||  ||||| |||||| ||| ||| || |||||||||||||    
T  37555990 aagcagtgtcggtccgtttgcggagaaaccagcaacggcgatagaagc-aagtaagagctttagcttgaagggggggcaggataaagtgatggactcaca 37556088  T
Q  304 cttgagggggagtgttg 320  Q
    |||||||||||||||||    
T  37556089 cttgagggggagtgttg 37556105  T

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Target: chr1; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 11977374 - 11977440
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccg 67  Q
    ||||||||||||||| ||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  11977374 ttgggtaagagtgtgatgtctctcttgcaagtgcggttgttctagcctcgatgtggacggtcccccg 11977440  T

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Target: chr1; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 14318961 - 14319027
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccg 67  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||    
T  14318961 ttgggtaagagtgtggtgtctctcttatttgtgcggttgttctagcctcaatgtggacggtcccccg 14319027  T

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Target: chr1; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 41142473 - 41142533
Alignment:
Q  7 aagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccg 67  Q
    |||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  41142473 aagagtgtggcgtctctcttgcttgtgtggttgttctagcctcgatgtggacggtcccccg 41142533  T

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Target: chr1; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 209 - 309
Target Start/End: Complemental strand, 41184298 - 41184198
Alignment:
Q  209 agtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttgagggggagcacgatgaattgatggactcacacttga 308  Q
    |||||||||||||||| ||| ||||||||||||  || |||  |||   ||||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  41184298 agtgtcggtccgtttgcggaaaaaccagcaacgacgatacaaacaagtaaagagcttccgcttgagggggagcacgatgaagtgatggactcacacttga 41184199  T
Q  309 g 309  Q
    |    
T  41184198 g 41184198  T

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Target: chr1; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 41759577 - 41759641
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccc 65  Q
    |||||||||||||||||||||||||||||| || |||||||||||||| ||||||||||||||||    
T  41759577 ttgggtaagagtgtggtgtctctcttgcttatgtggttgttctagccttgatgtggacggtcccc 41759641  T

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Target: chr1; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 40082500 - 40082574
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccc 75  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||  |||| ||| |||||||    
T  40082500 ttgggtaagagtgtggtatctctcttgcttgtgcgtttgttctagcctcgatgtggatagtcctccgagctcccc 40082574  T

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Target: chr1; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 251 - 320
Target Start/End: Complemental strand, 50051883 - 50051813
Alignment:
Q  251 gcaaagtaagagcttctgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttg 320  Q
    ||||||||||||||||||||||| ||||||||| |||||||| |||||||||||||||||||||| |||||    
T  50051883 gcaaagtaagagcttctgcttgaagggggagcatgatgaattaatggactcacacttgagggggaatgttg 50051813  T

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Target: chr1; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 26661586 - 26661521
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtccccc 66  Q
    ||||||||||||||||||||||||| ||||||| |||||||| ||||||||| |||||||||||||    
T  26661586 ttgggtaagagtgtggtgtctctctcgcttgtgtggttgttcaagcctcgatatggacggtccccc 26661521  T

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Target: chr1; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 222 - 320
Target Start/End: Complemental strand, 66349 - 66250
Alignment:
Q  222 ttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttg 320  Q
    |||||||||| |||||||||| || ||| ||||  |||||||||| |||||| |||||| || ||||||| ||||||||||||||||||||| |||||||    
T  66349 ttgtggagaagccagcaacggcgatacaagcaagataagagcttccgcttgatgggggaacatgatgaatagatggactcacacttgaggggaagtgttg 66250  T

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Target: chr1; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 3537372 - 3537309
Alignment:
Q  258 aagagcttctgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttg 320  Q
    ||||||||| |||||| ||||||||| |||||||||||||||||||||||||||||||||||||    
T  3537372 aagagcttccgcttgaagggggagcaagatgaattgatggactcacacttgagggggagtgttg 3537309  T

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Target: chr1; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 37556205 - 37556260
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtgg 56  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  37556205 ttgggtaagagtgtggtgtctctcttgcttgtgtggttgttcaagcctcgatgtgg 37556260  T

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Target: chr1; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 41157473 - 41157532
Alignment:
Q  5 gtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtccc 64  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||    
T  41157473 gtaagagtgtggtgtctgtcttgcttgtgtggttgttctagcctcgatgtgggcggtccc 41157532  T

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Target: chr1; HSP #36
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 251 - 320
Target Start/End: Complemental strand, 44290690 - 44290620
Alignment:
Q  251 gcaaagtaagagcttctgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttg 320  Q
    ||||||||||||||||  ||||| ||||||||| ||||||| |||||||||||||||||||||||||||||    
T  44290690 gcaaagtaagagcttccccttgaagggggagcatgatgaatagatggactcacacttgagggggagtgttg 44290620  T

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Target: chr1; HSP #37
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 247 - 320
Target Start/End: Complemental strand, 48588724 - 48588650
Alignment:
Q  247 acatgcaaagtaagagcttctgcttgaggggg-agcacgatgaattgatggactcacacttgagggggagtgttg 320  Q
    ||||||||| |||||||||| |||||| |||| |||| ||||||| |||||||||||||||||||||||||||||    
T  48588724 acatgcaaaataagagcttccgcttgaaggggtagcatgatgaatagatggactcacacttgagggggagtgttg 48588650  T

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Target: chr1; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 4 - 81
Target Start/End: Complemental strand, 3875392 - 3875315
Alignment:
Q  4 ggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatga 81  Q
    ||||||| ||||| ||||||||  || ||| ||||||||||||||||||||||||||||| ||| |||||||||||||    
T  3875392 ggtaagaatgtggagtctctctcactagtgtggttgttctagcctcgatgtggacggtcctccgagctcccctcatga 3875315  T

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Target: chr1; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 75
Target Start/End: Complemental strand, 21378118 - 21378049
Alignment:
Q  6 taagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccc 75  Q
    ||||||||||| |||| | ||||||||| ||||||||||||||| ||||||||||||||| |||||||||    
T  21378118 taagagtgtggcgtctatattgcttgtgtggttgttctagcctcaatgtggacggtcccctgcgctcccc 21378049  T

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Target: chr1; HSP #40
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 38804419 - 38804370
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcg 50  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  38804419 ttgggtaagagtgtagtgtctctcttgcttgtgcggttgttctagcctcg 38804370  T

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Target: chr1; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 45494038 - 45493973
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtccccc 66  Q
    |||| ||||||||||||||||||||| ||| || |||||||| |||||||||||||||||||||||    
T  45494038 ttggataagagtgtggtgtctctcttccttatgtggttgttcaagcctcgatgtggacggtccccc 45493973  T

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Target: chr1; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 5320029 - 5319965
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccc 65  Q
    |||||||||||||| ||||||||||||||| || ||||||||||||||| |||| ||||||||||    
T  5320029 ttgggtaagagtgtagtgtctctcttgcttatgtggttgttctagcctcaatgtagacggtcccc 5319965  T

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Target: chr1; HSP #43
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 257 - 320
Target Start/End: Complemental strand, 22077719 - 22077656
Alignment:
Q  257 taagagcttctgcttgagggggagcacgatgaattgatggactcacacttgagggggagtgttg 320  Q
    |||||||||| |||||| |||||||| |||||||  ||||||||||||||||||||||||||||    
T  22077719 taagagcttccgcttgatggggagcatgatgaatacatggactcacacttgagggggagtgttg 22077656  T

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Target: chr1; HSP #44
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 234 - 320
Target Start/End: Complemental strand, 26661773 - 26661686
Alignment:
Q  234 cagcaacggagacacatgcaaagtaagagcttctgcttgagggg-gagcacgatgaattgatggactcacacttgagggggagtgttg 320  Q
    ||||||||  || |||||||||||||||||||| |||||| ||| ||| | ||||||| ||||||||||||||| |||||||||||||    
T  26661773 cagcaacgacgatacatgcaaagtaagagcttccgcttgaagggagagtatgatgaatagatggactcacacttaagggggagtgttg 26661686  T

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Target: chr1; HSP #45
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 88
Target Start/End: Complemental strand, 50051748 - 50051666
Alignment:
Q  5 gtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaaca 88  Q
    ||||||||||||||||||||||| || || | |||||||||| |||||||||||||||||||  ||||||||| ||| ||||||    
T  50051748 gtaagagtgtggtgtctctcttgtttatgtg-ttgttctagcatcgatgtggacggtccccctagctcccctcgtgacccaaca 50051666  T

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Target: chr1; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 3550814 - 3550871
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggt 61  Q
    ||||||||||||||||||||||||||||   | ||||||||||||||||||||||||||||    
T  3550814 ttgggtaagagtgtggtgtctctcttgc---tacggttgttctagcctcgatgtggacggt 3550871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 254 - 323
Target Start/End: Complemental strand, 47380012 - 47379942
Alignment:
Q  254 aagtaagagcttctgcttgaggggg-agcacgatgaattgatggactcacacttgagggggagtgttgatg 323  Q
    |||||||| |||| ||||||||||| |||||||||||||| |||||| ||| |||||||||||||||||||    
T  47380012 aagtaagaacttccgcttgaggggggagcacgatgaattgttggacttacatttgagggggagtgttgatg 47379942  T

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Target: chr1; HSP #48
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 88 - 179
Target Start/End: Complemental strand, 3537496 - 3537410
Alignment:
Q  88 agtggtatcagagccccggttcgacgaagggtgcgaccgaggccgccggttagttgcgcagaaagc-agcaacgacggtacaagcagcaagtg 179  Q
    ||||||||||||||| |||||||||||||||| |||||||||    | ||||||  |||||||||| ||||||| ||||||||||||||||||    
T  3537496 agtggtatcagagccacggttcgacgaagggtacgaccgagg----cagttagt--cgcagaaagcaagcaacggcggtacaagcagcaagtg 3537410  T

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Target: chr1; HSP #49
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 24448212 - 24448274
Alignment:
Q  258 aagagcttctgcttgagggggagcacgatgaattgatggactcacacttgagggggagtgttg 320  Q
    ||||||||  |||||||||  |||||||||||||||||| |||||| ||||||||||||||||    
T  24448212 aagagctttcgcttgagggaaagcacgatgaattgatgggctcacaattgagggggagtgttg 24448274  T

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Target: chr1; HSP #50
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 24600374 - 24600312
Alignment:
Q  5 gtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccg 67  Q
    ||||||||||||||||||||| ||| ||  |||||||||||||||||||||||| || |||||    
T  24600374 gtaagagtgtggtgtctctctcgctagtatggttgttctagcctcgatgtggacagttccccg 24600312  T

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Target: chr1; HSP #51
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 273 - 319
Target Start/End: Complemental strand, 30630846 - 30630800
Alignment:
Q  273 agggggagcacgatgaattgatggactcacacttgagggggagtgtt 319  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||    
T  30630846 agggggagcatgatgaattgatggactcacacttgagagggagtgtt 30630800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 45839725 - 45839779
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtg 55  Q
    |||||||||| |||||||||||||||||||||| | ||||||| |||||||||||    
T  45839725 ttgggtaagattgtggtgtctctcttgcttgtgggattgttctggcctcgatgtg 45839779  T

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Target: chr1; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 29798293 - 29798358
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtccccc 66  Q
    |||| |||||||||||||||||||||||  ||| |||||||||| ||||||| | |||||||||||    
T  29798293 ttggataagagtgtggtgtctctcttgcaagtgtggttgttctaacctcgatatagacggtccccc 29798358  T

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Target: chr1; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 39066264 - 39066200
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtccccc 66  Q
    |||| ||||||||||||||||||||| ||| || |||||||||||||| ||||| |||||||||||    
T  39066264 ttggataagagtgtggtgtctctcttacttatgtggttgttctagccttgatgt-gacggtccccc 39066200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 6 - 65
Target Start/End: Complemental strand, 4266855 - 4266798
Alignment:
Q  6 taagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccc 65  Q
    |||||||||| |||||||||| ||||||  ||||||||||||||||||||| ||||||||    
T  4266855 taagagtgtgatgtctctcttacttgtg--gttgttctagcctcgatgtgggcggtcccc 4266798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 208 - 320
Target Start/End: Complemental strand, 22077393 - 22077283
Alignment:
Q  208 cagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttgagggggagcacgatgaattgatggactcacacttg 307  Q
    ||||||||||| ||| | ||||||||| ||| ||| || ||| |||| ||||||||||  ||||||  | ||||| ||||||| ||||||| ||||||||    
T  22077393 cagtgtcggtctgtt-gcggagaaaccggcagcggcgatacaagcaa-gtaagagctttcgcttgatagcgagcatgatgaatagatggacacacacttg 22077296  T
Q  308 agggggagtgttg 320  Q
    |||||||||||||    
T  22077295 agggggagtgttg 22077283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 34365019 - 34365075
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtgga 57  Q
    ||||||||||||||||||||||||| |||| ||| |||| |||| ||||||||||||    
T  34365019 ttgggtaagagtgtggtgtctctctcgcttatgcagttgctctaacctcgatgtgga 34365075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 309
Target Start/End: Complemental strand, 3537562 - 3537495
Alignment:
Q  244 gacacatgcaaagtaa-gagcttctgcttga-gggggagcacgatgaattgatggactcacacttgag 309  Q
    ||||||||||| |||| ||||||| |||||| ||||||||| ||||| ||||||||||||||||||||    
T  3537562 gacacatgcaaggtaaagagcttccgcttgaagggggagcatgatgatttgatggactcacacttgag 3537495  T

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Target: chr1; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 320
Target Start/End: Complemental strand, 1188457 - 1188392
Alignment:
Q  254 aagtaagagcttctgcttgagggggagcacgatgaattgatggactcacacttgagggggagtgttg 320  Q
    |||||||||||||  ||||| ||| |||| |||||||||||||||||||||||||||  ||||||||    
T  1188457 aagtaagagcttccacttgaaggg-agcatgatgaattgatggactcacacttgaggatgagtgttg 1188392  T

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Target: chr1; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 24132043 - 24131965
Alignment:
Q  10 agtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaaca 88  Q
    ||||||||||||||||  || ||| |||||||||||||||||||| |||| || || | || |||||||||| ||||||    
T  24132043 agtgtggtgtctctctcactagtgtggttgttctagcctcgatgtagacgatctcctgagcccccctcatgacccaaca 24131965  T

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Target: chr1; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 274 - 316
Target Start/End: Original strand, 41157323 - 41157365
Alignment:
Q  274 gggggagcacgatgaattgatggactcacacttgagggggagt 316  Q
    ||||||||||||| ||||||||||||||||||| |||||||||    
T  41157323 gggggagcacgataaattgatggactcacacttaagggggagt 41157365  T

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Target: chr1; HSP #62
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 19283519 - 19283434
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaa 86  Q
    |||| ||||||||||| ||||||||  |||||||||||| |||||||| |||||||  |||||||    |||||||||||| ||||    
T  19283519 ttggataagagtgtggcgtctctctcacttgtgcggttgctctagcctggatgtgggaggtccccttgactcccctcatgacccaa 19283434  T

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Target: chr1; HSP #63
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 22077174 - 22077109
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtccccc 66  Q
    |||| ||||||||||  ||||| ||  ||| ||||||||||| |||||||||||||||||||||||    
T  22077174 ttggataagagtgtgacgtctccctcacttatgcggttgttcaagcctcgatgtggacggtccccc 22077109  T

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Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 47380231 - 47380060
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcat-gatccaacagtggtatcaga 99  Q
    |||||||||||||||   |||||||  |||||  ||||| || ||||| |||||||  |||||||    ||||||| || || |||||| ||||||||||    
T  47380231 ttgggtaagagtgtgacatctctctcacttgtctggttgctcaagcctagatgtgggtggtcccctagactcccctaattgacccaacaatggtatcaga 47380132  T
Q  100 gccccggttcgacgaagggtgcgaccgaggccgccggttagttgcgcagaaagcagcaacgacggtacaagc 171  Q
    |||||| || || |||| || |||| |||||  ||||| ||||||  ||||| |||||| | ||||||||||    
T  47380131 gccccgatttgatgaagagtacgactgaggcaaccggtcagttgcagagaaaccagcaatggcggtacaagc 47380060  T

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Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 116
Target Start/End: Complemental strand, 30630619 - 30630586
Alignment:
Q  83 ccaacagtggtatcagagccccggttcgacgaag 116  Q
    |||||||||||||||||| |||||||||||||||    
T  30630619 ccaacagtggtatcagagtcccggttcgacgaag 30630586  T

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Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 32594780 - 32594747
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgc 34  Q
    |||||||||||||||||||||||||| |||||||    
T  32594780 ttgggtaagagtgtggtgtctctcttacttgtgc 32594747  T

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Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 320
Target Start/End: Complemental strand, 50469306 - 50469242
Alignment:
Q  255 agtaagagcttctgcttgagggggagcacgatgaattgatggactcacacttgagggggagtgttg 320  Q
    ||||||||||||||||||||| |||| | ||||||| |||  ||| |||| |||||||||||||||    
T  50469306 agtaagagcttctgcttgaggaggagtatgatgaatagataaactgacac-tgagggggagtgttg 50469242  T

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Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 5528818 - 5528762
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtgga 57  Q
    ||||||||  |||||| |||||||||  || ||||||||||||| ||||||||||||    
T  5528818 ttgggtaaatgtgtggcgtctctcttctttatgcggttgttctatcctcgatgtgga 5528762  T

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Target: chr2 (Bit Score: 115; Significance: 2e-58; HSPs: 66)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 36178669 - 36178508
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagag 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||| || ||| |||| |||||||||||||    
T  36178669 ttgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctctatgtggacgatcccccgcgctccc-tcgtgacccaatagtggtatcagag 36178571  T
Q  101 ccccggttcgacgaagggtgcgaccgaggccgccggttagttgcgcagaaagcagcaacgacg 163  Q
    ||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||| ||||    
T  36178570 ccccggttcgacgaagggtgcgaccaaggccaccggtcagttgcgcagaaagcagcaatgacg 36178508  T

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Target: chr2; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 37106018 - 37106154
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagag 100  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||  ||| ||||||||||||||||||    
T  37106018 ttgggtaagagtgtggtgtctctcttgcttgtacggttgttctagcctcgatgtggacggtcccccgagctccccttgtgacccaacagtggtatcagag 37106117  T
Q  101 ccccggttcgacgaagggtgcgaccgaggccgccggt 137  Q
    |||||||||||||||||||||||| ||||||||||||    
T  37106118 ccccggttcgacgaagggtgcgactgaggccgccggt 37106154  T

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Target: chr2; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 29676623 - 29676819
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagag 100  Q
    ||||||||||||||||||||||||||||||||| |||| ||| | |||||||||||||||||||| |  ||||||   ||| ||||||||||||||||||    
T  29676623 ttgggtaagagtgtggtgtctctcttgcttgtggggttattcaaacctcgatgtggacggtccccggaactccccag-tgacccaacagtggtatcagag 29676721  T
Q  101 ccccggttcgacgaagggtgcgaccgaggccgccggttagttgcgcagaaagcagcaacgacggtacaagcagcaagtggctccttgtacggcaacgg 198  Q
    ||||||||| |||||||||  ||| |||||||||| | |||||||||||||||| ||||||| ||||||||||||||||||||||||| | |||||||    
T  29676722 ccccggttcaacgaagggtatgactgaggccgccgatcagttgcgcagaaagcaacaacgacagtacaagcagcaagtggctccttgtgcagcaacgg 29676819  T

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Target: chr2; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 14745731 - 14745544
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgct-cccctcatgatccaacagtggtatcaga 99  Q
    |||||||||||||||| |||||||||||  ||| |||||||||||||||||||||||| |||||||| ||| |||||| ||| |||||||||||||||||    
T  14745731 ttgggtaagagtgtggcgtctctcttgcaagtgtggttgttctagcctcgatgtggacagtcccccgagctccccctcgtgacccaacagtggtatcaga 14745632  T
Q  100 gccccggttcgacgaagggtgcgaccgaggccgccggttagttgcgcagaaagcagcaacgacggtacaagcagcaagtggctccttgt 188  Q
    |||||||||||| ||||||||||||| |||| ||| | | ||| |||||||||| |||||||| ||||||||| |||||||||||||||    
T  14745631 gccccggttcgatgaagggtgcgaccaaggcagcc-gatcgttacgcagaaagccgcaacgacagtacaagcaacaagtggctccttgt 14745544  T

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Target: chr2; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 5543062 - 5542876
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagag 100  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| ||  | ||||||| ||||||||||||||||||||||||    
T  5543062 ttgggtaagagtgtggtgtctctattgcttgtgcggttgttcaagcctcgatgtggacggtaccttgagctccccccatgatccaacagtggtatcagag 5542963  T
Q  101 ccccggttcgacgaagggtgcgaccgaggccgccggttagttgcgcagaaagcagcaacgacggtacaagcagcaagtggctccttgt 188  Q
    |  ||||||||||| |  ||| |||||||| | ||| | |||| ||||||||| |||||| ||||||||||| |||||||||||||||    
T  5542962 cttcggttcgacgacgaatgcaaccgaggcagtcgg-tcgttgtgcagaaagccgcaacggcggtacaagcaacaagtggctccttgt 5542876  T

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Target: chr2; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 6421479 - 6421648
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagag 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||    
T  6421479 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagtctcgatgtggacggtcccccgagctcccctcgtgacccaacagtggtatcagag 6421578  T
Q  101 ccccggttcgacgaagggtgcgaccgaggccgccggttagttgcgcagaaagcagcaacgacggtacaagc 171  Q
    | || ||||||| |||||| |||| ||||  || |  |  ||| |||||||||||||||||| ||||||||    
T  6421579 cacc-gttcgacaaagggtacgactgagggagctgtctgtttgtgcagaaagcagcaacgacagtacaagc 6421648  T

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Target: chr2; HSP #7
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 7598322 - 7598494
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagag 100  Q
    |||||||||| | ||||||||||||  ||||||||||||||| |||||||||||| ||||||||| |  |||||||| ||| |||||| |||||||| ||    
T  7598322 ttgggtaagaatatggtgtctctctcacttgtgcggttgttcaagcctcgatgtgaacggtcccctgatctcccctcgtgacccaacactggtatcaaag 7598421  T
Q  101 ccccggttcgacgaagggtgcgaccgaggccgccggttagttgcgcagaaagcagcaacgacggtacaagcag 173  Q
    ||| ||||||||||||||| |||| ||||  ||||||  ||||||||||||||||||||||||||||||||||    
T  7598422 cccaggttcgacgaagggtacgactgaggtagccggtccgttgcgcagaaagcagcaacgacggtacaagcag 7598494  T

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Target: chr2; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 4 - 173
Target Start/End: Original strand, 23346333 - 23346502
Alignment:
Q  4 ggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccc 103  Q
    |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||| ||||||||||||| |||||| ||||||||||| ||    
T  23346333 ggtaagagtgtgatgtctctcttgcttgtgcggttgttctagcctagatgtggacggtcgcccgagctcccctcatgacccaacaatggtatcagag-cc 23346431  T
Q  104 cggttcgacgaagggtgcgaccgaggccgccggttagt-tgcgcagaaagcagcaacgacggtacaagcag 173  Q
    ||||| |||| ||||| |||||||||  ||||||  || ||||||||||||| ||| | | ||||||||||    
T  23346432 cggtttgacgtagggtacgaccgaggtagccggtctgtctgcgcagaaagcaacaatggcagtacaagcag 23346502  T

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Target: chr2; HSP #9
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 6421825 - 6421954
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagag 100  Q
    |||||||||||||||||||||||||  |||||| ||||||||| ||||||||||||||||||||||| ||||||||||||| ||||| ||||||| ||||    
T  6421825 ttgggtaagagtgtggtgtctctctaacttgtgtggttgttctggcctcgatgtggacggtcccccgagctcccctcatgacccaacggtggtattagag 6421924  T
Q  101 ccccggttcgacgaagggtgcgaccgaggc 130  Q
    || ||||||||| |||||| ||||||||||    
T  6421925 cctcggttcgacaaagggtacgaccgaggc 6421954  T

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Target: chr2; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 42514743 - 42514866
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagag 100  Q
    |||||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||    
T  42514743 ttgggtaagagtgtggcgtctctcttacttgtggggttgttctagcctcgatgtggacggtcccccgagctcccctcgtgacccaacagtggtatcagag 42514842  T
Q  101 ccccggttcgacgaagggtgcgacc 125  Q
     ||| |||||||||||||| |||||    
T  42514843 -ccctgttcgacgaagggtacgacc 42514866  T

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Target: chr2; HSP #11
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 196 - 320
Target Start/End: Original strand, 3672954 - 3673079
Alignment:
Q  196 cggcagtgcaagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttg-agggggagcacgatgaattgat 294  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||   | ||||||||||||| |||||| ||||| || ||||||| |||||||||||    
T  3672954 cggcggtgcaagcagtgtcggtccgtttgcggagaaaccagcaacgacaatacatgcaaagtaaaagcttccgcttgaagagggagcatgatgaattgat 3673053  T
Q  295 ggactcacacttgagggggagtgttg 320  Q
    |||||||||||||||| |||||||||    
T  3673054 ggactcacacttgaggaggagtgttg 3673079  T

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Target: chr2; HSP #12
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 35580788 - 35580659
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagag 100  Q
    ||||||||||||| || |||||||||| ||||| ||||||||||||||||||||||||||||||||   ||||||  |||| |||| | |||||||||||    
T  35580788 ttgggtaagagtgcggcgtctctcttgtttgtggggttgttctagcctcgatgtggacggtccccctgactcccccaatgacccaataatggtatcagag 35580689  T
Q  101 ccccggttcgacgaagggtgcgaccgaggc 130  Q
    |||||||||||||||||||  |||||||||    
T  35580688 ccccggttcgacgaagggtatgaccgaggc 35580659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 962692 - 962818
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagag 100  Q
    ||||||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||| ||||  |||||| |||||||||||||| |||| ||||    
T  962692 ttgggtaagagtgtgttgtcactcttgcttgtgtggttgttctagcctcgatgtggacggtctcccgaactcccc-catgatccaacagtagtattagag 962790  T
Q  101 ccccggttcgacgaagggtgcgaccgagg 129  Q
     |||||||||| |||||||||||| ||||    
T  962791 -cccggttcgatgaagggtgcgactgagg 962818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 40733976 - 40734149
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcg-ctcccct-ca-tgatccaacagtggtatca 97  Q
    ||||||||||||||||||||| ||| ||||||| |||||||| || ||||||||||||||||||||  | ||||||| || ||| ||| |||||||||||    
T  40733976 ttgggtaagagtgtggtgtctgtctcgcttgtgtggttgttcaagtctcgatgtggacggtcccccttgactccccttcagtgaacca-cagtggtatca 40734074  T
Q  98 gagccccggttcgacgaagggtgcgaccgaggccgccggttagtt-gcgcagaaagcagcaacgacggtacaagca 172  Q
    |||||||| |||| | |||||| |||||||||| ||||||| ||| ||||||||||||||||| ||||||||||||    
T  40734075 gagccccg-ttcgtcaaagggtacgaccgaggcagccggttcgtttgcgcagaaagcagcaacaacggtacaagca 40734149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 5542686 - 5542602
Alignment:
Q  4 ggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaaca 88  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||| ||||||||||||    
T  5542686 ggtaagagtgtggtgtctctcttgcttgtgcggttgttcaagtctcgatgtggacggtcccccgagctccccccatgatccaaca 5542602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 192 - 320
Target Start/End: Complemental strand, 36785854 - 36785727
Alignment:
Q  192 gcaacggcagtgcaagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttgagggggagcacgatgaatt 291  Q
    |||||||| || |||||||| ||| ||||||||  |||||||||||||||  || |||  | ||||||||||||| ||||||||||||||| ||||||||    
T  36785854 gcaacggcggtacaagcagtatcgatccgtttgcagagaaaccagcaacgacgataca-accaagtaagagcttccgcttgagggggagcatgatgaatt 36785756  T
Q  292 gatggactcacacttgagggggagtgttg 320  Q
    ||||||||||||||| |||||||||||||    
T  36785755 gatggactcacactttagggggagtgttg 36785727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 36178235 - 36178148
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaaca 88  Q
    |||||||||||||||||| |||||||||||||| ||||||| |||||||||||| |||||||||||||||||||||| ||| ||||||    
T  36178235 ttgggtaagagtgtggtgcctctcttgcttgtgtggttgttatagcctcgatgtagacggtcccccgcgctcccctcgtgacccaaca 36178148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 3672795 - 3672968
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgct-cccctcatgatccaacagtggtatcaga 99  Q
    ||||||||||||||||||||||||||  ||||| ||||||||||| ||||||||||||||| ||||  ||| |||||  ||| |||||  || |||||||    
T  3672795 ttgggtaagagtgtggtgtctctcttaattgtgtggttgttctagtctcgatgtggacggttcccctggctccccctagtgacccaacgctgttatcaga 3672894  T
Q  100 gccccggttcgacgaagggtgcgaccgaggccgccggttag-ttgcgcagaaagcagcaacgacggtacaagcag 173  Q
    ||||| ||||||||||||||| || |||||| ||||||  | ||||||||||||||||  || |||| |||||||    
T  3672895 gcccc-gttcgacgaagggtgtgatcgaggcagccggtccgtttgcgcagaaagcagcggcggcggtgcaagcag 3672968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 208 - 320
Target Start/End: Original strand, 42514899 - 42515009
Alignment:
Q  208 cagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttgagggggagcacgatgaattgatggactcacacttg 307  Q
    ||||||||||||||| | ||||||||||||||| | || ||| |||| ||||||||||| ||||||| ||||||| ||||||| |||||||||||| |||    
T  42514899 cagtgtcggtccgtt-gcggagaaaccagcaacagcgatacaagcaa-gtaagagcttccgcttgagagggagcatgatgaatagatggactcacatttg 42514996  T
Q  308 agggggagtgttg 320  Q
    |||||||||||||    
T  42514997 agggggagtgttg 42515009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 6422207 - 6422269
Alignment:
Q  4 ggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtccccc 66  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  6422207 ggtaagagtgtggtgtctctcttgcttgtgtggttgttctagcctcgatgtggactgtccccc 6422269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 37106282 - 37106344
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcc 63  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  37106282 ttgggtaagagtgtggtgtttctcttgcttgtgcgattgttctagcctcgatgtggacggtcc 37106344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 6713071 - 6713160
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctca-tgatccaacag 89  Q
    ||||||||||||||| |||||||||||||| || | |||||||||||||||||||||||||||||||  || |||||| |||||||||||    
T  6713071 ttgggtaagagtgtgatgtctctcttgcttatgggattgttctagcctcgatgtggacggtcccccgaacttccctcactgatccaacag 6713160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 15511559 - 15511495
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccc 65  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| |||||    
T  15511559 ttgggtaagagtgtggtgtctctcttgcttgtgtggttgttctagtctcgatgtggacgatcccc 15511495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 15880357 - 15880429
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcc 73  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| ||| ||| |||||    
T  15880357 ttgggtaagagtgtggcgtctctcttgcttgtgcggttgttttagcctcgatgtggacgttcctccgagctcc 15880429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 40679852 - 40679790
Alignment:
Q  258 aagagcttctgcttgagggggagcacgatgaattgatggactcacacttgagggggagtgttg 320  Q
    ||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  40679852 aagagcttccgcttgagggggagcatgatgaatagatggactcacacttgagggggagtgttg 40679790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 41283536 - 41283462
Alignment:
Q  4 ggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctca 78  Q
    ||||||||||||| |||||||||| ||||| |||||||||||||| |||||||||||||||||  ||||||||||    
T  41283536 ggtaagagtgtggcgtctctcttgtttgtgtggttgttctagccttgatgtggacggtcccccatgctcccctca 41283462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 1769991 - 1770075
Alignment:
Q  6 taagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagt 90  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| ||| ||| ||  |||||||  |||| ||||||||    
T  1769991 taagagtgtggtgtctctcttgcttgtgaggttgttctagcctcgatgtgaacgatcctcctagctcccccaatgacccaacagt 1770075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 31899166 - 31899080
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaaca 88  Q
    ||||||||||||| ||| ||||||||||||||| |||| ||||| |||||||||| ||||| ||||  ||||||||||||||||||||    
T  31899166 ttgggtaagagtgaggtatctctcttgcttgtggggttcttctaacctcgatgtgaacggt-ccccaagctcccctcatgatccaaca 31899080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 257 - 319
Target Start/End: Original strand, 40733813 - 40733876
Alignment:
Q  257 taagagcttctgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgtt 319  Q
    |||||||||| |||||| ||||||||| ||||||||||||||||||||||||||||||||||||    
T  40733813 taagagcttccgcttgaagggggagcatgatgaattgatggactcacacttgagggggagtgtt 40733876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 3673162 - 3673236
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccc 75  Q
    |||| |||||||||| |||||||||| || ||| ||||||||||||||||||||||||||||||||  |||||||    
T  3673162 ttggctaagagtgtgatgtctctcttactagtgtggttgttctagcctcgatgtggacggtccccctggctcccc 3673236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 33731742 - 33731804
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcc 63  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||||||  |||||||    
T  33731742 ttgggtaagagtatggtgtctctcttgcttatgcggttgttctagcctcgatgtaaacggtcc 33731804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 36005944 - 36005870
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccc 75  Q
    |||||||| ||||||| |||||||||||||||| |||||||||||||||||||||||| ||| | || |||||||    
T  36005944 ttgggtaaaagtgtggcgtctctcttgcttgtggggttgttctagcctcgatgtggacagtctctcgagctcccc 36005870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 40679693 - 40679632
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtc 62  Q
    |||||||||||||||| ||||||||| |||||| ||||||||||| ||||||||||||||||    
T  40679693 ttgggtaagagtgtggcgtctctcttacttgtggggttgttctagtctcgatgtggacggtc 40679632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 40733611 - 40733777
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcg-ctcccc-tca-tgatccaacagtggtatca 97  Q
    ||||||||||||||||||||||||| ||||||| ||| |||| || ||||||||||| ||||||||  | |||||| ||| |||  | ||||||||||||    
T  40733611 ttgggtaagagtgtggtgtctctctcgcttgtgtggtagttcaagtctcgatgtggatggtcccccttgactccccttcagtgaatc-acagtggtatca 40733709  T
Q  98 gagccccggttcgacgaagggtgcgaccgaggccgccggttagttgcgcagaaagcagcaacgacggtacaagcag 173  Q
     |||||| ||||||| |||||| |||||||||| ||||||| |||       ||||||||||||| ||||||||||    
T  40733710 aagcccc-gttcgacaaagggtacgaccgaggcagccggttcgtt-------aagcagcaacgacagtacaagcag 40733777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 30313271 - 30313370
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagag 100  Q
    |||||||||||||||| ||||||||  |||||| ||||| ||| |||| ||| | |||| ||||||| |||| |||| ||| ||||||||||||||||||    
T  30313271 ttgggtaagagtgtggcgtctctctcacttgtgtggttgctctggcctggattttgacgatcccccgggctctcctcgtgacccaacagtggtatcagag 30313370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 40163436 - 40163349
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaaca 88  Q
    |||||||| |||||||||||||||||||||||| |||||||||| ||||||||| || |||| || | |||||||  |||| ||||||    
T  40163436 ttgggtaaaagtgtggtgtctctcttgcttgtgtggttgttctaacctcgatgtagatggtctcctgagctccccctatgacccaaca 40163349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 5367549 - 5367599
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcga 51  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  5367549 ttgggtaagagtgtggcgtctctcttgcttgtgcagttgttctagcctcga 5367599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 251 - 320
Target Start/End: Complemental strand, 5542857 - 5542787
Alignment:
Q  251 gcaaagtaagagcttctgcttgaggggga-gcacgatgaattgatggactcacacttgagggggagtgttg 320  Q
    ||||||| |||||||| |||||| ||||| ||| ||||||| |||||||||||||||||||||||||||||    
T  5542857 gcaaagttagagcttccgcttgaaggggaagcatgatgaatagatggactcacacttgagggggagtgttg 5542787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 197 - 307
Target Start/End: Original strand, 23346489 - 23346594
Alignment:
Q  197 ggcagtgcaagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttgagggggagcacgatgaattgatgg 296  Q
    |||||| ||||||||||||||| ||||| ||||||||||||||||| || ||||      ||||||||||||||||| |||| ||| ||||||| ||||     
T  23346489 ggcagtacaagcagtgtcggtctgtttgcggagaaaccagcaacggcgatacat-----ataagagcttctgcttgaaggggggcatgatgaatagatga 23346583  T
Q  297 actcacacttg 307  Q
    ||||| |||||    
T  23346584 actcatacttg 23346594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 216 - 320
Target Start/End: Complemental strand, 38796487 - 38796382
Alignment:
Q  216 gtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttga-gggggagcacgatgaatt-gatggactcacacttgaggggg 313  Q
    ||||||||| ||||||||||||||||  || ||| |||| |||||| |||| |||||| ||||||||| ||||||   ||||||||||||||||||||||    
T  38796487 gtccgtttgcggagaaaccagcaacgacgatacaagcaa-gtaagatcttccgcttgaagggggagcatgatgaaaaagatggactcacacttgaggggg 38796389  T
Q  314 agtgttg 320  Q
    |||||||    
T  38796388 agtgttg 38796382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 6421720 - 6421785
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtccccc 66  Q
    |||||||||||||||||||||||||  |||||| ||||||||  ||||||||||||||||| ||||    
T  6421720 ttgggtaagagtgtggtgtctctctaacttgtgtggttgttccggcctcgatgtggacggtacccc 6421785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 204 - 316
Target Start/End: Original strand, 6421996 - 6422109
Alignment:
Q  204 caagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttga-gggggagcacgatgaattgatggactcac 302  Q
    |||| ||||||||| |||||| ||||||||||||||||   | ||| || |   || | |||| |||||| ||||||||| |||||||||||||||||||    
T  6421996 caagtagtgtcggttcgtttgcggagaaaccagcaacgacaatacaagctagtaaaaaacttccgcttgaagggggagcatgatgaattgatggactcac 6422095  T
Q  303 acttgagggggagt 316  Q
    ||||||||||||||    
T  6422096 acttgagggggagt 6422109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 204 - 320
Target Start/End: Original strand, 7598488 - 7598605
Alignment:
Q  204 caagcagtgtc-ggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttgagggggagcacgatgaattgatggactcac 302  Q
    ||||||||||| |||| ||||  |||||||||| |||||  || ||| ||||   ||||||||| |||||| |||| ||| ||||||| |||||||||||    
T  7598488 caagcagtgtcaggtctgtttacggagaaaccaacaacgacgatacaagcaagtaaagagcttccgcttgaaggggggcatgatgaatagatggactcac 7598587  T
Q  303 acttgagggggagtgttg 320  Q
    ||||||| ||||||||||    
T  7598588 acttgagagggagtgttg 7598605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 38796684 - 38796578
Alignment:
Q  1 ttgggtaagagt--gtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcc--cccgcgctcccctcatgatccaacagtggtatc 96  Q
    ||||||||||||  |||| |||||| ||||||||| |||||||| ||||||||||| ||||||||  ||   |||||||  |||| ||||||||||||||    
T  38796684 ttgggtaagagtatgtggcgtctctattgcttgtgtggttgttcaagcctcgatgtcgacggtccctccaaggctcccccaatgacccaacagtggtatc 38796585  T
Q  97 agagccc 103  Q
    |||||||    
T  38796584 agagccc 38796578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 210 - 320
Target Start/End: Complemental strand, 28531583 - 28531475
Alignment:
Q  210 gtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttgagggggagcacgatgaattgatggactcacacttgag 309  Q
    ||||| |||||||| |||||||| || |||||  || ||| |||| |||| ||||||  ||||| ||| |||| |||||| |||||||||||||||||||    
T  28531583 gtgtcagtccgtttatggagaaagcaacaacgacgatacaagcaa-gtaatagcttccacttgaaggg-agcatgatgaactgatggactcacacttgag 28531486  T
Q  310 ggggagtgttg 320  Q
    |||||||||||    
T  28531485 ggggagtgttg 28531475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 16590993 - 16591054
Alignment:
Q  17 tgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctca 78  Q
    |||||||||| |||||| ||||||||||||||| |||||||| ||| |||| ||||||||||    
T  16590993 tgtctctcttacttgtggggttgttctagcctcaatgtggacagtctcccgagctcccctca 16591054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 7598698 - 7598754
Alignment:
Q  4 ggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacgg 60  Q
    ||||||||||||||||||||||  |||||| |||||||| ||| |||||||||||||    
T  7598698 ggtaagagtgtggtgtctctctcacttgtgtggttgttcaagcatcgatgtggacgg 7598754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 279 - 319
Target Start/End: Original strand, 40734231 - 40734271
Alignment:
Q  279 agcacgatgaattgatggactcacacttgagggggagtgtt 319  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  40734231 agcacgatgaattgatggaatcacacttgagggggagtgtt 40734271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 29677006 - 29677065
Alignment:
Q  5 gtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtccc 64  Q
    ||||||||||||||||||||||  ||||| |||||||| | |||||||||||| ||||||    
T  29677006 gtaagagtgtggtgtctctcttaattgtggggttgttccaacctcgatgtggatggtccc 29677065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 100
Target Start/End: Original strand, 30312912 - 30312983
Alignment:
Q  29 ttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagag 100  Q
    ||||||||||| ||| ||||  ||||||  ||||||||| ||||||||| ||| ||||||||||||||||||    
T  30312912 ttgtgcggttgctctggcctgaatgtgggtggtcccccgagctcccctcgtgacccaacagtggtatcagag 30312983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 258 - 312
Target Start/End: Original strand, 30313110 - 30313165
Alignment:
Q  258 aagagcttctgcttgagggg-gagcacgatgaattgatggactcacacttgagggg 312  Q
    ||||||||| |||||||||| ||||| ||||||||| |||||||||||||||||||    
T  30313110 aagagcttccgcttgaggggtgagcatgatgaattgttggactcacacttgagggg 30313165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 37632661 - 37632602
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacgg 60  Q
    ||||||||||||||||||| |||||| |  ||| | ||||||||||||||||||||||||    
T  37632661 ttgggtaagagtgtggtgtatctcttacaagtgtgattgttctagcctcgatgtggacgg 37632602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 41678593 - 41678530
Alignment:
Q  258 aagagcttctgcttgagggg-gagcacgatgaattgatggactcacacttgagggggagtgttg 320  Q
    ||||||||| |||||||| | |||||  |||||||||||||||||||||||| |||||||||||    
T  41678593 aagagcttccgcttgaggagagagcattatgaattgatggactcacacttgaaggggagtgttg 41678530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 274 - 320
Target Start/End: Original strand, 29676851 - 29676897
Alignment:
Q  274 gggggagcacgatgaattgatggactcacacttgagggggagtgttg 320  Q
    ||||||||||||| || ||||||||||||||||||||||| ||||||    
T  29676851 gggggagcacgataaagtgatggactcacacttgagggggtgtgttg 29676897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 315
Target Start/End: Original strand, 30323396 - 30323454
Alignment:
Q  258 aagagcttctgcttgagggg-gagcacgatgaattgatggactcacacttgagggggag 315  Q
    |||||| || |||||||||  ||||| ||||||||||||||||||||||||||||||||    
T  30323396 aagagcatccgcttgagggatgagcatgatgaattgatggactcacacttgagggggag 30323454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 252 - 312
Target Start/End: Complemental strand, 14745524 - 14745463
Alignment:
Q  252 caaagtaagagcttctgcttg-agggggagcacgatgaattgatggactcacacttgagggg 312  Q
    ||||||||||||||| ||||| |||||||||| ||||||| |||| ||||| ||||||||||    
T  14745524 caaagtaagagcttccgcttgaagggggagcatgatgaatagatgtactcaaacttgagggg 14745463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 34481589 - 34481642
Alignment:
Q  268 gcttgagg-gggagcacgatgaattgatggactcacacttgagggggagtgttg 320  Q
    |||||||| ||||||  |||||||||||||||||||||||||||| ||||||||    
T  34481589 gcttgaggcgggagcgtgatgaattgatggactcacacttgagggagagtgttg 34481642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 131
Target Start/End: Complemental strand, 36785927 - 36785880
Alignment:
Q  83 ccaacagtggtatcagagccccggttcgacgaagggtgcgaccgaggcc 131  Q
    |||||||||||||||||||||| |||||||||||||| ||| |||||||    
T  36785927 ccaacagtggtatcagagcccc-gttcgacgaagggtacgatcgaggcc 36785880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 28254301 - 28254258
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagc 46  Q
    |||||||||||||||||||||||||  |||||| ||||||||||||    
T  28254301 ttgggtaagagtgtggtgtctctct--cttgtggggttgttctagc 28254258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 28531378 - 28531316
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcc 63  Q
    |||||||||||||||||| ||||||   || ||| |||| ||||||||||||||||| |||||    
T  28531378 ttgggtaagagtgtggtgactctctcagttatgcagttgctctagcctcgatgtggatggtcc 28531316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 319
Target Start/End: Original strand, 40733472 - 40733510
Alignment:
Q  281 cacgatgaattgatggactcacacttgagggggagtgtt 319  Q
    |||||||||||||| ||||||||||||||||| ||||||    
T  40733472 cacgatgaattgatagactcacacttgaggggaagtgtt 40733510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 192 - 240
Target Start/End: Original strand, 6421632 - 6421679
Alignment:
Q  192 gcaacggcagtgcaagcagtgtcggtccgtttgtggagaaaccagcaac 240  Q
    |||||| |||| ||||| ||||||||||||||| |||||||||||||||    
T  6421632 gcaacgacagtacaagc-gtgtcggtccgtttgcggagaaaccagcaac 6421679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 103
Target Start/End: Original strand, 12911432 - 12911500
Alignment:
Q  35 ggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccc 103  Q
    ||||||||||||| |||||||||| ||||  || ||||||||||| |  ||| |||| |||||||||||    
T  12911432 ggttgttctagccacgatgtggacagtccttcgagctcccctcataactcaatagtgatatcagagccc 12911500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 317
Target Start/End: Complemental strand, 35580592 - 35580552
Alignment:
Q  277 ggagcacgatgaattgatggactcacacttgagggggagtg 317  Q
    |||||| ||||||| |||||||||||||||||||| |||||    
T  35580592 ggagcatgatgaatagatggactcacacttgagggagagtg 35580552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 320
Target Start/End: Original strand, 37106156 - 37106184
Alignment:
Q  292 gatggactcacacttgagggggagtgttg 320  Q
    |||||||||||||||||||||||||||||    
T  37106156 gatggactcacacttgagggggagtgttg 37106184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 188
Target Start/End: Complemental strand, 37895094 - 37894968
Alignment:
Q  60 gtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtgcgaccgaggccgccggttagttgcgcagaaagcagcaac 159  Q
    ||||| || |||| |||||||| ||||||||||| ||||| || |  ||||||||||||| | ||| ||||  || ||  |||| ||||||||| | |||    
T  37895094 gtccctcgggctctcctcatgacccaacagtggtgtcagaacctcc-ttcgacgaagggtactaccaaggcaaccagtctgttgtgcagaaagc-gaaac 37894997  T
Q  160 gacggtacaagcagcaagtggctccttgt 188  Q
     ||||||||||||||||||| ||| ||||    
T  37894996 aacggtacaagcagcaagtgactcattgt 37894968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734 (Bit Score: 101; Significance: 5e-50; HSPs: 2)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 192 - 320
Target Start/End: Original strand, 5643 - 5771
Alignment:
Q  192 gcaacggcagtgcaagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttgagggggagcacgatgaatt 291  Q
    |||||||| ||||||||||||||||||||||||  |||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  5643 gcaacggcggtgcaagcagtgtcggtccgtttgcagagaaaccagtaacggcgacacatgcaaagtaagagcttccgcttgagggggagcaagatgaatt 5742  T
Q  292 gatggactcacacttgagggggagtgttg 320  Q
    |||||||||||||||||||||||||||||    
T  5743 gatggactcacacttgagggggagtgttg 5771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 5491 - 5661
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctca-tgatccaacagtggtatcaga 99  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||| ||||   ||| |||||| ||| |||| ||||||||||||    
T  5491 ttgggtaagagtgtggtgtctctcttgcttgtggggttgttcaagcctcgatgtgg-cggaccccaaagct-ccctcagtgacccaatagtggtatcaga 5588  T
Q  100 gccccggttcgacgaagggtgcgaccgaggccgccggttag-ttgcgcagaaagcagcaacgacggtacaagcag 173  Q
    |  || ||||||||||||||| || | |||| | ||||  | |||||||||||||||||||| |||| |||||||    
T  5589 g--cctgttcgacgaagggtgtgatccaggcagtcggtccgtttgcgcagaaagcagcaacggcggtgcaagcag 5661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702 (Bit Score: 92; Significance: 1e-44; HSPs: 3)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 578 - 392
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagag 100  Q
    ||||||||||||||||||||| ||||||||| | |||| |||||||||||||||||| ||||||||| ||| |||   ||| ||||||||||||||||||    
T  578 ttgggtaagagtgtggtgtctttcttgcttgagtggtttttctagcctcgatgtggaaggtcccccgagcttccccagtgacccaacagtggtatcagag 479  T
Q  101 ccccggttcgacgaagggtgcgaccgaggccgccggttagttgcgcagaaagcagcaacgacggtacaagcagcaagtggctccttgt 188  Q
    ||||||||||||||||||||| |||||||  | ||| | |||||| ||||||  |||||  | |||||||||||||||||||||||||    
T  478 ccccggttcgacgaagggtgcaaccgaggtagtcgg-tcgttgcgaagaaagtcgcaacagcagtacaagcagcaagtggctccttgt 392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 208 - 145
Alignment:
Q  4 ggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccg 67  Q
    ||||||| |||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  208 ggtaagaatgtggtgtctctcttgcttgagtggttgttctagcctcgatgtggacggtcccccg 145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 320
Target Start/End: Complemental strand, 367 - 304
Alignment:
Q  257 taagagcttctgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttg 320  Q
    |||||||||| |||||| ||||||||| |||||||  ||||||||||| ||| ||||||||||||    
T  367 taagagcttccgcttgaagggggagcatgatgaataaatggactcacatttg-gggggagtgttg 304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 81; Significance: 4e-38; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 5076 - 5262
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctca-tgatccaacagtggtatcaga 99  Q
    ||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||  | |||    ||||||| | ||| |||||||||| |||| |    
T  5076 ttgggtaagagtgtggtgtctctctcgcttatgcggttgctctagcctcgatgtggaccattcccttttctcccctaagtgacccaacagtggcatcaca 5175  T
Q  100 gccccggttcgacgaagggtgcgaccgaggccgccggttagttgcgcagaaagcagcaacgacggtacaagcagcaagtggctccttgt 188  Q
    |||||| ||||||||| ||| ||| |||||| || |||  ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  5176 gccccg-ttcgacgaaaggtacgatcgaggcagctggtc-gttgcgcagaaagcagcaacggcggtacaagcagcaagtggctccttgt 5262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 238 - 316
Target Start/End: Original strand, 5268 - 5347
Alignment:
Q  238 aacggagacacatgcaaagtaagagcttctgcttga-gggggagcacgatgaattgatggactcacacttgagggggagt 316  Q
    ||||| || ||| |||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||| ||||    
T  5268 aacggcgatacaggcaaagtaagagcttccgcttgaagggggagcacgatgaactgatggactcacacttgagggagagt 5347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391 (Bit Score: 54; Significance: 6e-22; HSPs: 6)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 192 - 320
Target Start/End: Complemental strand, 1398 - 1270
Alignment:
Q  192 gcaacggcagtgcaagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttg-agggggagcacgatgaat 290  Q
    |||||||| || |||| |||||||||||||||| ||||||||||||||||  || ||| || ||||||||||||| ||| | |||||||||| ||| ||     
T  1398 gcaacggcggtacaagtagtgtcggtccgtttgcggagaaaccagcaacgacgatacaagc-aagtaagagcttccgctcgaagggggagcatgatcaaa 1300  T
Q  291 tgatggactcacacttgagggggagtgttg 320  Q
     ||||||||||||||||||||||| |||||    
T  1299 agatggactcacacttgagggggaatgttg 1270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 35 - 157
Target Start/End: Complemental strand, 1713 - 1591
Alignment:
Q  35 ggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtgcgaccgaggccgcc 134  Q
    |||||||||||||||||||||| | |||||||  ||||||||| ||| |||||||||||||||||||| | ||||||| |||||| | |||||||| ||     
T  1713 ggttgttctagcctcgatgtgggcagtccccctagctcccctcgtgacccaacagtggtatcagagcctc-gttcgacaaagggtacaaccgaggcagct 1615  T
Q  135 ggttag-ttgcgcagaaagcagca 157  Q
    |||  | |||||||||||||||||    
T  1614 ggtccgtttgcgcagaaagcagca 1591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 216 - 320
Target Start/End: Complemental strand, 3254 - 3149
Alignment:
Q  216 gtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttga-gggggagcacgatgaattgatggactcacacttgaggggga 314  Q
    ||||||||| |||||| ||| |||||| || |||    ||||||||||||| |||||| ||||||||| ||||| |||||||||||||||||||||||||    
T  3254 gtccgtttgcggagaacccaacaacggcgatacaaatcaagtaagagcttccgcttgaagggggagcatgatgagttgatggactcacacttgaggggga 3155  T
Q  315 gtgttg 320  Q
    ||||||    
T  3154 gtgttg 3149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 1170 - 1096
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccc 75  Q
    |||||||||||| |||||||||||||| || || ||||||||||||||||||||||||||| ||||  |||||||    
T  1170 ttgggtaagagtatggtgtctctcttgtttatgtggttgttctagcctcgatgtggacggttccccaagctcccc 1096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 89 - 170
Target Start/End: Complemental strand, 1465 - 1383
Alignment:
Q  89 gtggtatcagagccccggttcgacgaagggtgcgaccgaggccgccggttag-ttgcgcagaaagcagcaacgacggtacaag 170  Q
    |||||||||||||||||||||||||||||||  ||||||||| ||||||  | ||| |||||||||||||||| |||||||||    
T  1465 gtggtatcagagccccggttcgacgaagggtatgaccgaggcagccggtccgtttgtgcagaaagcagcaacggcggtacaag 1383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 318
Target Start/End: Complemental strand, 1575 - 1464
Alignment:
Q  209 agtgtcggtccgtttgtggagaaaccagcaacg--gagacacatgcaaagtaagagcttctgcttga-gggggagcacgatgaattgatggactcacact 305  Q
    ||||| |||||||||| ||||||||||||||||  | || ||| |||| |||| |||||  ||| || ||||||||| ||||||| ||| ||||||||||    
T  1575 agtgtaggtccgtttgcggagaaaccagcaacgttgtgatacaagcaa-gtaaaagctttcgctggaagggggagcatgatgaatcgattgactcacact 1477  T
Q  306 tgagggggagtgt 318  Q
    |||||||||||||    
T  1476 tgagggggagtgt 1464  T

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Target: scaffold0027 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 47454 - 47519
Alignment:
Q  1 ttgggtaagagtgtggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtccccc 66  Q
    |||||||| | |||||||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  47454 ttgggtaaaaatgtggtgtctctcttgcttgcgcggttgttctaacctcgatgtggacggtccccc 47519  T

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Target: scaffold0113 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 39549 - 39672
Alignment:
Q  1 ttgggtaagagtgt-ggtgtctctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcaga 99  Q
    |||||||| ||||| || |||||||||||||||| ||||| ||| |||| |||||||   || ||||  ||||||||  ||| |||||||||||||||||    
T  39549 ttgggtaaaagtgttggcgtctctcttgcttgtgtggttgatct-gcct-gatgtgggtagttcccctggctcccctagtgacccaacagtggtatcaga 39646  T
Q  100 gccccggttcgacgaagggtgcgacc 125  Q
    |||  ||||||||||||||| |||||    
T  39647 gccgaggttcgacgaagggttcgacc 39672  T

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Target: scaffold0113; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 258 - 314
Target Start/End: Original strand, 39771 - 39828
Alignment:
Q  258 aagagcttctgcttgagggg-gagcacgatgaattgatggactcacacttgaggggga 314  Q
    ||||||||| |||||||||| ||||| |||||||||||| ||||||||||||||||||    
T  39771 aagagcttccgcttgaggggtgagcatgatgaattgatgaactcacacttgaggggga 39828  T

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Target: scaffold0171 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 277 - 320
Target Start/End: Complemental strand, 17663 - 17620
Alignment:
Q  277 ggagcacgatgaattgatggactcacacttgagggggagtgttg 320  Q
    |||||| ||||||| |||||||||||||||||||||||||||||    
T  17663 ggagcatgatgaatagatggactcacacttgagggggagtgttg 17620  T

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