View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21082_high_20 (Length: 237)

Name: NF21082_high_20
Description: NF21082
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21082_high_20
NF21082_high_20
[»] chr2 (11 HSPs)
chr2 (51-142)||(35682004-35682095)
chr2 (51-134)||(2155726-2155809)
chr2 (51-142)||(22264186-22264277)
chr2 (51-130)||(2165686-2165765)
chr2 (49-134)||(31636093-31636179)
chr2 (49-101)||(22011224-22011276)
chr2 (49-134)||(27956406-27956492)
chr2 (49-101)||(27952570-27952622)
chr2 (49-101)||(31633896-31633948)
chr2 (49-101)||(33655418-33655470)
chr2 (49-142)||(15129168-15129262)
[»] chr8 (11 HSPs)
chr8 (51-134)||(18468475-18468558)
chr8 (51-134)||(22922098-22922181)
chr8 (58-143)||(22926889-22926972)
chr8 (49-143)||(37189616-37189710)
chr8 (49-125)||(23573350-23573427)
chr8 (49-143)||(23570337-23570431)
chr8 (49-139)||(42891916-42892007)
chr8 (52-142)||(22512296-22512387)
chr8 (51-130)||(18180935-18181014)
chr8 (52-101)||(6845129-6845178)
chr8 (57-101)||(42890199-42890243)
[»] chr6 (9 HSPs)
chr6 (51-142)||(18726883-18726974)
chr6 (51-134)||(3535794-3535877)
chr6 (51-134)||(3542005-3542088)
chr6 (51-130)||(11194428-11194507)
chr6 (51-134)||(30049675-30049757)
chr6 (51-134)||(30051962-30052044)
chr6 (59-133)||(11190259-11190333)
chr6 (55-143)||(29341043-29341132)
chr6 (58-122)||(18203253-18203318)
[»] chr5 (6 HSPs)
chr5 (51-134)||(19501197-19501280)
chr5 (49-142)||(21849216-21849310)
chr5 (49-142)||(21857130-21857224)
chr5 (49-142)||(21845135-21845229)
chr5 (49-134)||(40779032-40779117)
chr5 (81-132)||(22440657-22440709)
[»] chr4 (8 HSPs)
chr4 (51-124)||(13085339-13085412)
chr4 (49-134)||(6659575-6659660)
chr4 (49-101)||(22691099-22691151)
chr4 (49-124)||(22716430-22716506)
chr4 (49-124)||(22988711-22988787)
chr4 (51-125)||(19935275-19935349)
chr4 (80-145)||(50519512-50519578)
chr4 (76-143)||(9260362-9260431)
[»] scaffold0110 (2 HSPs)
scaffold0110 (58-134)||(45871-45947)
scaffold0110 (51-126)||(46952-47027)
[»] chr1 (7 HSPs)
chr1 (51-128)||(8930989-8931066)
chr1 (51-142)||(50857691-50857783)
chr1 (76-146)||(23987357-23987428)
chr1 (76-134)||(23989031-23989090)
chr1 (49-142)||(13444230-13444324)
chr1 (77-134)||(10927910-10927968)
chr1 (49-81)||(42071566-42071598)
[»] chr3 (8 HSPs)
chr3 (55-134)||(19795027-19795106)
chr3 (49-143)||(43306917-43307012)
chr3 (49-142)||(43304203-43304297)
chr3 (49-109)||(45168538-45168598)
chr3 (80-144)||(5324853-5324918)
chr3 (49-142)||(53012778-53012870)
chr3 (49-135)||(3069120-3069207)
chr3 (74-142)||(3064009-3064078)
[»] chr7 (7 HSPs)
chr7 (49-142)||(859401-859495)
chr7 (49-142)||(1217405-1217499)
chr7 (49-142)||(1220678-1220772)
chr7 (49-142)||(13886432-13886526)
chr7 (77-131)||(11228530-11228585)
chr7 (49-142)||(13882930-13883022)
chr7 (49-134)||(4300314-4300400)


Alignment Details
Target: chr2 (Bit Score: 76; Significance: 3e-35; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 51 - 142
Target Start/End: Complemental strand, 35682095 - 35682004
Alignment:
Q  51 aaaacgaaataataatagaaagatctagaaaattactaagatttggctaaaataaaatactataaaattactaaggaaaccctcgtgcatca 142  Q
    |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||    
T  35682095 aaaacgaaataacaatagaaagttctagaaaattactaagatttggctaaaataaaatactataaaattactaagaaaaccctcctgcatca 35682004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 51 - 134
Target Start/End: Complemental strand, 2155809 - 2155726
Alignment:
Q  51 aaaacgaaataataatagaaagatctagaaaattactaagatttggctaaaataaaatactataaaattactaaggaaaccctc 134  Q
    ||||| |||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  2155809 aaaacaaaataataatagaaagttctagaaaatcactaagatttgactaaaataaaatactataaaattactaaggaaaccctc 2155726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 51 - 142
Target Start/End: Complemental strand, 22264277 - 22264186
Alignment:
Q  51 aaaacgaaataataatagaaagatctagaaaattactaagatttggctaaaataaaatactataaaattactaaggaaaccctcgtgcatca 142  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||| ||| |||  |||||||    
T  22264277 aaaacaaaataataatagaaagttctagaaaattactaagatttggctaaaataaaatactactaaattactaagaaaatccttctgcatca 22264186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 51 - 130
Target Start/End: Complemental strand, 2165765 - 2165686
Alignment:
Q  51 aaaacgaaataataatagaaagatctagaaaattactaagatttggctaaaataaaatactataaaattactaaggaaac 130  Q
    ||||| ||||||||||| |||| |||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  2165765 aaaacaaaataataatacaaagttctaaaaaatcactaagatttgactaaaataaaatactataaaattactaaggaaac 2165686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 49 - 134
Target Start/End: Complemental strand, 31636179 - 31636093
Alignment:
Q  49 ataaaacgaaataataatagaaagatctagaaaattactaagatttggctaaa-ataaaatactataaaattactaaggaaaccctc 134  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||| |  ||||||||  ||||||||||  ||||||||    
T  31636179 ataaaacgaaataataatagaaagttctagaaaattactaagatttggctaaataataaatactactaaattactaataaaaccctc 31636093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 49 - 101
Target Start/End: Complemental strand, 22011276 - 22011224
Alignment:
Q  49 ataaaacgaaataataatagaaagatctagaaaattactaagatttggctaaa 101  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  22011276 ataaaacgaaataataatagaaagttctagaaaattactaagatttggctaaa 22011224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 49 - 134
Target Start/End: Original strand, 27956406 - 27956492
Alignment:
Q  49 ataaaacgaaataataatagaaagatctagaaaattactaagatttggctaaa-ataaaatactataaaattactaaggaaaccctc 134  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| |||| |  ||||||||  ||||||||||  ||||||||    
T  27956406 ataaaacgaaataataatagaaagttctagaaaattactaagatttggataaataataaatactactaaattactaataaaaccctc 27956492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 49 - 101
Target Start/End: Original strand, 27952570 - 27952622
Alignment:
Q  49 ataaaacgaaataataatagaaagatctagaaaattactaagatttggctaaa 101  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  27952570 ataaaacgaaataataatagaaagttctagaaaattactaagatttggataaa 27952622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 49 - 101
Target Start/End: Complemental strand, 31633948 - 31633896
Alignment:
Q  49 ataaaacgaaataataatagaaagatctagaaaattactaagatttggctaaa 101  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  31633948 ataaaatgaaataataatagaaagttctagaaaattactaagatttggctaaa 31633896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 49 - 101
Target Start/End: Complemental strand, 33655470 - 33655418
Alignment:
Q  49 ataaaacgaaataataatagaaagatctagaaaattactaagatttggctaaa 101  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  33655470 ataaaacaaaataataatagaaagttctagaaaattactaagatttggctaaa 33655418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 49 - 142
Target Start/End: Complemental strand, 15129262 - 15129168
Alignment:
Q  49 ataaaacgaaataataatagaaagatctagaaaattactaagatttggctaaa-ataaaatactataaaattactaaggaaaccctcgtgcatca 142  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||| |||| |  ||||||||  |||||| |||  |||||||| |||||||    
T  15129262 ataaaacgaaataataataggaagttctagaaaattactaagatttggttaaataataaatactactaaattattaataaaaccctcctgcatca 15129168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 7e-33; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 51 - 134
Target Start/End: Complemental strand, 18468558 - 18468475
Alignment:
Q  51 aaaacgaaataataatagaaagatctagaaaattactaagatttggctaaaataaaatactataaaattactaaggaaaccctc 134  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  18468558 aaaacgaaataataatagaaagttctagaaaattactaagatttggttaaaataaaatactataaaattactaaggaagccctc 18468475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 51 - 134
Target Start/End: Original strand, 22922098 - 22922181
Alignment:
Q  51 aaaacgaaataataatagaaagatctagaaaattactaagatttggctaaaataaaatactataaaattactaaggaaaccctc 134  Q
    ||||| |||||||||||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||||    
T  22922098 aaaacaaaataataatagaaagttctagaaaatcactaagatttgactaaaataaaatactataaaattactaaggaagccctc 22922181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 58 - 143
Target Start/End: Original strand, 22926889 - 22926972
Alignment:
Q  58 aataataatagaaagatctagaaaattactaagatttggctaaaataaaatactataaaattactaaggaaaccctcgtgcatcaa 143  Q
    ||||||||||||||| |||||||||| |||||  |||| |||||||||||||||||||||||||||||||| ||||| | ||||||    
T  22926889 aataataatagaaagttctagaaaatcactaa--tttgactaaaataaaatactataaaattactaaggaagccctcctacatcaa 22926972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 49 - 143
Target Start/End: Complemental strand, 37189710 - 37189616
Alignment:
Q  49 ataaaacgaaataataatagaaagatctagaaaattactaagatttggctaaaataaaatactataaaattactaaggaaaccctcgtgcatcaa 143  Q
    ||||||| ||||||||||| |||| |||| ||| ||||||||||||||||||||||||||||||  ||||||||||| |||| ||| || |||||    
T  37189710 ataaaacaaaataataatataaagttctaaaaagttactaagatttggctaaaataaaatactactaaattactaagaaaactctcctggatcaa 37189616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 49 - 125
Target Start/End: Complemental strand, 23573427 - 23573350
Alignment:
Q  49 ataaaacgaaataataatagaaagatctagaaaattactaagatttggctaaa-ataaaatactataaaattactaag 125  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||| |||| |  |||||||||||||||||||||    
T  23573427 ataaaacgaaataaaaatagaaagttctagaaaattactaagatttggttaaataataaatactataaaattactaag 23573350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 49 - 143
Target Start/End: Complemental strand, 23570431 - 23570337
Alignment:
Q  49 ataaaacgaaataataatagaaagatctagaaaattactaagatttggctaaa-ataaaatactataaaattactaaggaaaccctcgtgcatcaa 143  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||  |||| |  |||||||||||||||||||| ||||||||| | ||||||    
T  23570431 ataaaacgaaataaaaatagaaagttctagaaaattactaagatttgattaaataataaatactataaaattactaa-gaaaccctcctacatcaa 23570337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 49 - 139
Target Start/End: Original strand, 42891916 - 42892007
Alignment:
Q  49 ataaaacgaaataataatagaaagatctagaaaattactaagatttggctaaa-ataaaatactataaaattactaaggaaaccctcgtgca 139  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| |||| |  ||||||||  ||||||||||  |||||||| ||||    
T  42891916 ataaaacgaaataataatagaaagttctagaaaattactaagatttggttaaataataaatactactaaattactaataaaaccctcctgca 42892007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 52 - 142
Target Start/End: Original strand, 22512296 - 22512387
Alignment:
Q  52 aaacgaaataataatagaaagatctagaaaattactaagatttggctaaa-ataaaatactataaaattactaaggaaaccctcgtgcatca 142  Q
    |||||||||||||||| |||| ||||||||||||||||||||| |||||| |  ||||||||  ||||||||||  |||| ||| |||||||    
T  22512296 aaacgaaataataatataaagttctagaaaattactaagatttagctaaataataaatactactaaattactaataaaactctcctgcatca 22512387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 130
Target Start/End: Original strand, 18180935 - 18181014
Alignment:
Q  51 aaaacgaaataataatagaaagatctagaaaattactaagatttggctaaaataaaatactataaaattactaaggaaac 130  Q
    |||||||||||| ||||||||  |||| ||||||| |||||||||  | |||||||||||||  ||||||||||| ||||    
T  18180935 aaaacgaaataagaatagaaatttctaaaaaattattaagatttgagttaaataaaatactactaaattactaagaaaac 18181014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 52 - 101
Target Start/End: Complemental strand, 6845178 - 6845129
Alignment:
Q  52 aaacgaaataataatagaaagatctagaaaattactaagatttggctaaa 101  Q
    ||||| |||||||||||| || | |||||||||||||||||||| |||||    
T  6845178 aaacgtaataataatagagagttttagaaaattactaagatttgactaaa 6845129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 101
Target Start/End: Complemental strand, 42890243 - 42890199
Alignment:
Q  57 aaataataatagaaagatctagaaaattactaagatttggctaaa 101  Q
    |||||||||||||||| ||||||||||||||   |||||||||||    
T  42890243 aaataataatagaaagttctagaaaattacttccatttggctaaa 42890199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 2e-30; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 51 - 142
Target Start/End: Complemental strand, 18726974 - 18726883
Alignment:
Q  51 aaaacgaaataataatagaaagatctagaaaattactaagatttggctaaaataaaatactataaaattactaaggaaaccctcgtgcatca 142  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||  |||||||| |||||||    
T  18726974 aaaacgaaataataatagaaagttctagaaaatgactaagatttggctaaaataaaaaactataaaattactaaaaaaaccctcctgcatca 18726883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 51 - 134
Target Start/End: Complemental strand, 3535877 - 3535794
Alignment:
Q  51 aaaacgaaataataatagaaagatctagaaaattactaagatttggctaaaataaaatactataaaattactaaggaaaccctc 134  Q
    ||||| |||||||||||||||| |||||||||| | ||||||||| ||||||||||||||| |||||||||||||||| |||||    
T  3535877 aaaacaaaataataatagaaagttctagaaaatcattaagatttgactaaaataaaatactttaaaattactaaggaagccctc 3535794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 51 - 134
Target Start/End: Complemental strand, 3542088 - 3542005
Alignment:
Q  51 aaaacgaaataataatagaaagatctagaaaattactaagatttggctaaaataaaatactataaaattactaaggaaaccctc 134  Q
    ||||| |||||||||||||||| |||||||||| | ||||||||| ||||||||||||||| |||||||||||||||| |||||    
T  3542088 aaaacaaaataataatagaaagttctagaaaatcattaagatttgactaaaataaaatactttaaaattactaaggaagccctc 3542005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 51 - 130
Target Start/End: Complemental strand, 11194507 - 11194428
Alignment:
Q  51 aaaacgaaataataatagaaagatctagaaaattactaagatttggctaaaataaaatactataaaattactaaggaaac 130  Q
    ||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||    
T  11194507 aaaacaaaataatactagaaagttctagaaaattactaagatttggctaaaataaaatactactaaattactaagaaaac 11194428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 51 - 134
Target Start/End: Complemental strand, 30049757 - 30049675
Alignment:
Q  51 aaaacgaaataataatagaaagatctagaaaattactaagatttggctaaaataaaatactataaaattactaaggaaaccctc 134  Q
    ||||| |||||||||||||||| |||||||||| ||||| |||||||||||| ||||||||||||||||||||||||| |||||    
T  30049757 aaaacaaaataataatagaaagttctagaaaatcactaaaatttggctaaaa-aaaatactataaaattactaaggaagccctc 30049675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 51 - 134
Target Start/End: Complemental strand, 30052044 - 30051962
Alignment:
Q  51 aaaacgaaataataatagaaagatctagaaaattactaagatttggctaaaataaaatactataaaattactaaggaaaccctc 134  Q
    ||||| |||||||||||||||| |||||||||| ||||| |||||||||||| ||||||||||||||||||||||||| |||||    
T  30052044 aaaacaaaataataatagaaagttctagaaaatcactaaaatttggctaaaa-aaaatactataaaattactaaggaagccctc 30051962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 59 - 133
Target Start/End: Complemental strand, 11190333 - 11190259
Alignment:
Q  59 ataataatagaaagatctagaaaattactaagatttggctaaaataaaatactataaaattactaaggaaaccct 133  Q
    |||||||||||||| |||||||||||||| || |||| ||||||||||||||||| |||||| |||| |||||||    
T  11190333 ataataatagaaagttctagaaaattacttaggtttgactaaaataaaatactattaaattattaagaaaaccct 11190259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 55 - 143
Target Start/End: Original strand, 29341043 - 29341132
Alignment:
Q  55 cgaaataataatagaaagatctagaaaattactaagatttggctaaaata-aaatactataaaattactaaggaaaccctcgtgcatcaa 143  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||| | ||||||||  ||||||||||  |||||||| | ||||||    
T  29341043 cgaaataataatagaaagttttagaaaattactaagatttggctaaaaaataaatactactaaattactaataaaaccctcctacatcaa 29341132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 122
Target Start/End: Complemental strand, 18203318 - 18203253
Alignment:
Q  58 aataataatagaaagatctagaaaattactaagatttggctaaa-ataaaatactataaaattact 122  Q
    |||||||||||| || |||||||||||||||||||||| ||||| |  ||||||||||||||||||    
T  18203318 aataataatagagagttctagaaaattactaagatttgactaaataataaatactataaaattact 18203253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 4e-28; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 51 - 134
Target Start/End: Original strand, 19501197 - 19501280
Alignment:
Q  51 aaaacgaaataataatagaaagatctagaaaattactaagatttggctaaaataaaatactataaaattactaaggaaaccctc 134  Q
    ||||| |||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  19501197 aaaacaaaataataatagaaagttttagaaaattactaagatttgggtaaaataaaatactataaaattactaaagaaaccctc 19501280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 49 - 142
Target Start/End: Original strand, 21849216 - 21849310
Alignment:
Q  49 ataaaacgaaataataatagaaagatctagaaaattactaagatttggctaaa-ataaaatactataaaattactaaggaaaccctcgtgcatca 142  Q
    ||||||| |||||| ||||||||| ||||||||||||||||||||||| |||| |  ||||||||||||||||||||| ||||||||||||||||    
T  21849216 ataaaacaaaataaaaatagaaagttctagaaaattactaagatttggttaaataataaatactataaaattactaagaaaaccctcgtgcatca 21849310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 49 - 142
Target Start/End: Original strand, 21857130 - 21857224
Alignment:
Q  49 ataaaacgaaataataatagaaagatctagaaaattactaagatttggctaaa-ataaaatactataaaattactaaggaaaccctcgtgcatca 142  Q
    ||||||| |||||| ||||||||| ||||||||||||||||||||||| |||| |  ||||||||||||||||||||| ||||||||||||||||    
T  21857130 ataaaacaaaataaaaatagaaagttctagaaaattactaagatttggttaaataataaatactataaaattactaagaaaaccctcgtgcatca 21857224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 49 - 142
Target Start/End: Original strand, 21845135 - 21845229
Alignment:
Q  49 ataaaacgaaataataatagaaagatctagaaaattactaagatttggctaaa-ataaaatactataaaattactaaggaaaccctcgtgcatca 142  Q
    ||||||| |||||| ||||||||| ||||||||||||||||||||||| |||| |  ||||||||||||||||||||| |||||||| |||||||    
T  21845135 ataaaacaaaataaaaatagaaagttctagaaaattactaagatttggttaaataataaatactataaaattactaagaaaaccctcttgcatca 21845229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 49 - 134
Target Start/End: Original strand, 40779032 - 40779117
Alignment:
Q  49 ataaaacgaaataataatagaaagatctagaaaattactaagatttggctaaa-ataaaatactataaaattactaaggaaaccctc 134  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||| |  ||||||| |||||||||||| |||||||||    
T  40779032 ataaaacgaaataataatagaaagttctagaaaattactaagatttggctaaataataaatactgtaaaattactaa-gaaaccctc 40779117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 132
Target Start/End: Complemental strand, 22440709 - 22440657
Alignment:
Q  81 aattactaagatttggctaaaataaaa-tactataaaattactaaggaaaccc 132  Q
    ||||||||| ||| ||||||||||||| ||| || ||||||||||||||||||    
T  22440709 aattactaaaattgggctaaaataaaaatacgatgaaattactaaggaaaccc 22440657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 6e-27; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 51 - 124
Target Start/End: Original strand, 13085339 - 13085412
Alignment:
Q  51 aaaacgaaataataatagaaagatctagaaaattactaagatttggctaaaataaaatactataaaattactaa 124  Q
    |||||||||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  13085339 aaaacgaaataataatagaaagttctagaatattactaagatgtggctaaaataaaatactataaaattactaa 13085412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 49 - 134
Target Start/End: Original strand, 6659575 - 6659660
Alignment:
Q  49 ataaaacgaaataataatagaaagatctagaaaattactaagatttggctaaa-ataaaatactataaaattactaaggaaaccctc 134  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||||||||| |  ||||||| |||||||||||| |||||||||    
T  6659575 ataaaacaaaataataatagaaagttctagaaaattactaagatttggctaaataataaatactgtaaaattactaa-gaaaccctc 6659660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 49 - 101
Target Start/End: Complemental strand, 22691151 - 22691099
Alignment:
Q  49 ataaaacgaaataataatagaaagatctagaaaattactaagatttggctaaa 101  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  22691151 ataaaacgaaataataatacaaagttctagaaaattactaagatttggctaaa 22691099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 49 - 124
Target Start/End: Complemental strand, 22716506 - 22716430
Alignment:
Q  49 ataaaacgaaataataatagaaagatctagaaaattactaagatttggctaaa-ataaaatactataaaattactaa 124  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||||||||||| |  ||||||||| ||||||||||    
T  22716506 ataaaaagaaataataatagaaagttctagaaaattattaagatttggctaaataataaatactattaaattactaa 22716430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 49 - 124
Target Start/End: Original strand, 22988711 - 22988787
Alignment:
Q  49 ataaaacgaaataataatagaaagatctagaaaattactaagatttggctaaa-ataaaatactataaaattactaa 124  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||||||||||| |  ||||||||| ||||||||||    
T  22988711 ataaaaagaaataataatagaaagttctagaaaattattaagatttggctaaataataaatactattaaattactaa 22988787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 51 - 125
Target Start/End: Complemental strand, 19935349 - 19935275
Alignment:
Q  51 aaaacgaaataataatagaaagatctagaaaattactaagatttggctaaaataaaatactataaaattactaag 125  Q
    |||||||||||||||||||||| |||  ||||| | ||||||||| ||||||||||||||||  |||||||||||    
T  19935349 aaaacgaaataataatagaaagttctgaaaaatgattaagatttgactaaaataaaatactactaaattactaag 19935275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 80 - 145
Target Start/End: Original strand, 50519512 - 50519578
Alignment:
Q  80 aaattactaagatttggctaaaataaaa-tactataaaattactaaggaaaccctcgtgcatcaaaa 145  Q
    |||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||| | ||||||||    
T  50519512 aaattattaaaatttggctaaaataaaaatactataaaattactaaggaaaccctcctacatcaaaa 50519578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 143
Target Start/End: Complemental strand, 9260431 - 9260362
Alignment:
Q  76 tagaaaattactaagatttggctaaaat-aaaatactata-aaattactaaggaaaccctcgtgcatcaa 143  Q
    |||||||||||||| ||||||||||||| ||||||||||| ||| ||||| |||  ||||| ||||||||    
T  9260431 tagaaaattactaaaatttggctaaaataaaaatactatagaaaatactatggattccctcatgcatcaa 9260362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 58 - 134
Target Start/End: Original strand, 45871 - 45947
Alignment:
Q  58 aataataatagaaagatctagaaaattactaagatttggctaaaataaaatactataaaattactaaggaaaccctc 134  Q
    ||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  45871 aataataatagaaagttctagaaaatcactaaaatttggctaaaataaaatactataaaattactaaggaagccctc 45947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 51 - 126
Target Start/End: Original strand, 46952 - 47027
Alignment:
Q  51 aaaacgaaataataatagaaagatctagaaaattactaagatttggctaaaataaaatactataaaattactaagg 126  Q
    ||||| |||||||||||||||| |||||||||| ||||| ||||| ||||||||||||||||||||||||||||||    
T  46952 aaaacaaaataataatagaaagttctagaaaatcactaaaatttgactaaaataaaatactataaaattactaagg 47027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 2e-24; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 51 - 128
Target Start/End: Complemental strand, 8931066 - 8930989
Alignment:
Q  51 aaaacgaaataataatagaaagatctagaaaattactaagatttggctaaaataaaatactataaaattactaaggaa 128  Q
    ||||| |||||||||||||||| |||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||    
T  8931066 aaaacaaaataataatagaaagttctagaaaatcactaagatttgactaaaataaaatactttaaaattactaaggaa 8930989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 51 - 142
Target Start/End: Original strand, 50857691 - 50857783
Alignment:
Q  51 aaaacgaaataataatagaaagatctagaaaattactaagatttggctaaa-ataaaatactataaaattactaaggaaaccctcgtgcatca 142  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| |  ||||||||  ||||||||||  |||||||| |||||||    
T  50857691 aaaacgaaataataatagaaagttctagaaaattactaagatttggctaaataataaatactactaaattactaataaaaccctcctgcatca 50857783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 76 - 146
Target Start/End: Complemental strand, 23987428 - 23987357
Alignment:
Q  76 tagaaaattactaagatttggctaaaataaaa-tactataaaattactaaggaaaccctcgtgcatcaaaag 146  Q
    |||||||||||||| |||| |||||||||||| |||||| |||||||||||||||||||| | |||||||||    
T  23987428 tagaaaattactaaaatttagctaaaataaaaatactatgaaattactaaggaaaccctcctacatcaaaag 23987357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 76 - 134
Target Start/End: Complemental strand, 23989090 - 23989031
Alignment:
Q  76 tagaaaattactaagatttggctaaaat-aaaatactataaaattactaaggaaaccctc 134  Q
    |||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||    
T  23989090 tagaaaattactaaaatttggctaaaataaaaatactatgaaattactaaggaaaccctc 23989031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 49 - 142
Target Start/End: Original strand, 13444230 - 13444324
Alignment:
Q  49 ataaaacgaaataataatagaaagatctagaaaattactaagatttggctaaa-ataaaatactataaaattactaaggaaaccctcgtgcatca 142  Q
    |||||||||||||||||||||||  ||| |||||||||||| ||||||||||| |  ||||||||  ||||||||||  ||| |||| |||||||    
T  13444230 ataaaacgaaataataatagaaaattcttgaaaattactaaaatttggctaaataataaatactactaaattactaataaaatcctcctgcatca 13444324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 10927968 - 10927910
Alignment:
Q  77 agaaaattactaagatttggctaaaataaaa-tactataaaattactaaggaaaccctc 134  Q
    |||||||||||||  ||| || ||||||||| |||||||||||||||||||||||||||    
T  10927968 agaaaattactaaattttagccaaaataaaaatactataaaattactaaggaaaccctc 10927910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 81
Target Start/End: Original strand, 42071566 - 42071598
Alignment:
Q  49 ataaaacgaaataataatagaaagatctagaaa 81  Q
    |||||||||||||||||||||||| ||||||||    
T  42071566 ataaaacgaaataataatagaaagttctagaaa 42071598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 2e-23; HSPs: 8)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 55 - 134
Target Start/End: Complemental strand, 19795106 - 19795027
Alignment:
Q  55 cgaaataataatagaaagatctagaaaattactaagatttggctaaaataaaatactataaaattactaaggaaaccctc 134  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||||||||||  |||||||||||| |||| ||||    
T  19795106 cgaaataataatagaaagttctagaaaattactaagatttagctaaaataaaataccgtaaaattactaaagaaatcctc 19795027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 49 - 143
Target Start/End: Original strand, 43306917 - 43307012
Alignment:
Q  49 ataaaacgaaataataatagaaagatctagaaaattactaagatttggctaaa-ataaaatactataaaattactaaggaaaccctcgtgcatcaa 143  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||| |||| |  ||||||||  ||||||||||  |||||||| ||||||||    
T  43306917 ataaaacgaaataataatagaatgttctagaaaattactaagatttggttaaataataaatactactaaattactaataaaaccctcctgcatcaa 43307012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 49 - 142
Target Start/End: Original strand, 43304203 - 43304297
Alignment:
Q  49 ataaaacgaaataataatagaaagatctagaaaattactaagatttggctaaa-ataaaatactataaaattactaaggaaaccctcgtgcatca 142  Q
    ||||||||||||| |||||||||| | |||||||||||||||||||||||||| |  |||| |||  ||||||||||  |||||||| |||||||    
T  43304203 ataaaacgaaatactaatagaaagttatagaaaattactaagatttggctaaataataaatgctactaaattactaataaaaccctcctgcatca 43304297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 109
Target Start/End: Original strand, 45168538 - 45168598
Alignment:
Q  49 ataaaacgaaataataatagaaagatctagaaaattactaagatttggctaaaataaaata 109  Q
    |||||||||||||||||||||| | | |||||||||||||| ||||| |||||||||||||    
T  45168538 ataaaacgaaataataatagaaggttttagaaaattactaaaatttgcctaaaataaaata 45168598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 144
Target Start/End: Original strand, 5324853 - 5324918
Alignment:
Q  80 aaattactaagatttggctaaaataaaa-tactataaaattactaaggaaaccctcgtgcatcaaa 144  Q
    |||||||||| ||||||||||||||||| ||||||  ||||||||||||||||||| | |||||||    
T  5324853 aaattactaaaatttggctaaaataaaaatactatgcaattactaaggaaaccctcttacatcaaa 5324918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 142
Target Start/End: Complemental strand, 53012870 - 53012778
Alignment:
Q  49 ataaaacgaaataataatagaaagatctagaaaattactaagatttggctaaa-ataaaatactataaaattactaaggaaaccctcgtgcatca 142  Q
    |||||||  ||||||||||||  | |||||||||||||||||||||||||||| |  ||||||||  ||||||||||  |||||||| |||||||    
T  53012870 ataaaacataataataataga--gttctagaaaattactaagatttggctaaataataaatactactaaattactaataaaaccctcctgcatca 53012778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 135
Target Start/End: Original strand, 3069120 - 3069207
Alignment:
Q  49 ataaaacgaaataataatagaaagatctagaaaattactaagatttggctaaa-ataaaatactataaaattactaaggaaaccctcg 135  Q
    |||||||| |||||||||||  || |||||| |||||| |||||||||||||| |  ||||||||  ||||||||||  |||||||||    
T  3069120 ataaaacgtaataataatagtgagttctagagaattacaaagatttggctaaataataaatactactaaattactaataaaaccctcg 3069207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 142
Target Start/End: Original strand, 3064009 - 3064078
Alignment:
Q  74 tctagaaaattactaagatttggctaaa-ataaaatactataaaattactaaggaaaccctcgtgcatca 142  Q
    |||||| ||||||||||||||||||||| |  ||||||||  ||||||||||  |||||||| |||||||    
T  3064009 tctagagaattactaagatttggctaaataataaatactactaaattactaacaaaaccctcctgcatca 3064078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 2e-20; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 49 - 142
Target Start/End: Original strand, 859401 - 859495
Alignment:
Q  49 ataaaacgaaataataatagaaagatctagaaaattactaagatttggctaaa-ataaaatactataaaattactaaggaaaccctcgtgcatca 142  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||| |  ||||||||  ||||||||||  ||| |||| |||||||    
T  859401 ataaaacgaaataataatagaaagttctagaaaattactaagatttggctaaataataaatactactaaattactaataaaatcctcctgcatca 859495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 49 - 142
Target Start/End: Original strand, 1217405 - 1217499
Alignment:
Q  49 ataaaacgaaataataatagaaagatctagaaaattactaagatttggctaaa-ataaaatactataaaattactaaggaaaccctcgtgcatca 142  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||| |  ||||||||   |||||||||  |||||||| |||||||    
T  1217405 ataaaacgaaataataatagaaagttctagaaaattactaagatttggctaaataataaatactactgaattactaataaaaccctcctgcatca 1217499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 49 - 142
Target Start/End: Original strand, 1220678 - 1220772
Alignment:
Q  49 ataaaacgaaataataatagaaagatctagaaaattactaagatttggctaaa-ataaaatactataaaattactaaggaaaccctcgtgcatca 142  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||| |  ||||||||  ||||||||||  ||| |||| |||||||    
T  1220678 ataaaacgaaataataatagaaagttctagaaaattactaagatttggctaaataataaatactactaaattactaataaaatcctcctgcatca 1220772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 49 - 142
Target Start/End: Original strand, 13886432 - 13886526
Alignment:
Q  49 ataaaacgaaataataatagaaagatctagaaaattactaagatttggctaaa-ataaaatactataaaattactaaggaaaccctcgtgcatca 142  Q
    |||||||| |||||||||||| || |||||||||||||||||||||| ||||| |  ||||||||  ||||||||||  |||||||  |||||||    
T  13886432 ataaaacgtaataataatagagagttctagaaaattactaagatttgactaaataataaatactactaaattactaataaaacccttctgcatca 13886526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 131
Target Start/End: Complemental strand, 11228585 - 11228530
Alignment:
Q  77 agaaaattactaagatttggctaaaataaaa-tactataaaattactaaggaaacc 131  Q
    ||||||||||||| ||| ||||||||||||| |||||||||||||||| |||||||    
T  11228585 agaaaattactaaaattgggctaaaataaaaatactataaaattactatggaaacc 11228530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 142
Target Start/End: Original strand, 13882930 - 13883022
Alignment:
Q  49 ataaaacgaaataataatagaaagatctagaaaattactaagatttggctaaa-ataaaatactataaaattactaaggaaaccctcgtgcatca 142  Q
    |||||||| ||||||||||||  | |||||||||||||||||||||| ||||| |  ||||||||  ||||||||||  |||||||| |||||||    
T  13882930 ataaaacgtaataataataga--gttctagaaaattactaagatttgactaaataataaatactactaaattactaataaaaccctcctgcatca 13883022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 134
Target Start/End: Complemental strand, 4300400 - 4300314
Alignment:
Q  49 ataaaacgaaataataatagaaagatctagaaaattactaagatttggctaaa-ataaaatactataaaattactaaggaaaccctc 134  Q
    |||||||| |||||||||||| || | ||||||||||||| | |||||||||| |  ||||||||  ||||||||||  ||||||||    
T  4300400 ataaaacgtaataataatagagagttttagaaaattactatgttttggctaaataataaatactactaaattactaataaaaccctc 4300314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University