View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21082_low_17 (Length: 245)
Name: NF21082_low_17
Description: NF21082
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21082_low_17 |
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Alignment Details
Target: chr3 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 52631047 - 52631273
Alignment:
| Q |
1 |
ccttcagatacaattatacggcatatggtgaatgtcaacagaatagtaacaacgttcttgatgttgttcttcacggttgccattgatgattatttannnn |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
52631047 |
ccttcagatacaattatacggcatatggtgaatgtcaacagaatagtaacaacgttcttgatgttgttcttcacggttgccattgatgattatttatttt |
52631146 |
T |
|
| Q |
101 |
nnncaaaccctatatatctatgatattgtatataacggaaaactaattatacaagcccctagctacgtgcatgtgcgacccatatgtaattagctagaaa |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
52631147 |
tttcaaaccctatatatctatgatattgtatataacggaaaactaattatacaagcccctagctacgtgcatgtgcgacccatatgtaattagctagaaa |
52631246 |
T |
|
| Q |
201 |
agattaataagaaaagtgggttataga |
227 |
Q |
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||||||||||||||||||||||||||| |
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| T |
52631247 |
agattaataagaaaagtgggttataga |
52631273 |
T |
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