View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21085_high_3 (Length: 290)

Name: NF21085_high_3
Description: NF21085
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21085_high_3
NF21085_high_3
[»] chr3 (3 HSPs)
chr3 (20-268)||(8341824-8342072)
chr3 (146-252)||(8333037-8333143)
chr3 (20-204)||(26727420-26727604)
[»] scaffold0061 (1 HSPs)
scaffold0061 (20-252)||(29813-30045)
[»] scaffold0017 (2 HSPs)
scaffold0017 (20-252)||(168747-168979)
scaffold0017 (20-267)||(173756-174003)
[»] chr1 (6 HSPs)
chr1 (20-267)||(44144742-44144990)
chr1 (20-204)||(44785757-44785941)
chr1 (20-158)||(44611648-44611786)
chr1 (22-204)||(35898942-35899124)
chr1 (20-267)||(11544676-11544927)
chr1 (153-267)||(44612085-44612199)
[»] chr2 (2 HSPs)
chr2 (24-252)||(29228546-29228774)
chr2 (24-252)||(29341845-29342073)
[»] chr5 (9 HSPs)
chr5 (167-249)||(29508115-29508197)
chr5 (164-252)||(29507536-29507624)
chr5 (164-249)||(29507611-29507696)
chr5 (164-249)||(29507683-29507768)
chr5 (164-202)||(29507874-29507912)
chr5 (164-202)||(29507946-29507984)
chr5 (164-202)||(29508090-29508128)
chr5 (164-249)||(29507755-29507840)
chr5 (164-249)||(29507971-29508056)


Alignment Details
Target: chr3 (Bit Score: 221; Significance: 1e-121; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 20 - 268
Target Start/End: Original strand, 8341824 - 8342072
Alignment:
Q  20 tcaataactgagttgcaacatctaacatatctagacctcagttatttgaatactagtggtcaaattccaaaatttattggatcgttcagcaacttacgat 119  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8341824 tcaataactgagttgtaacatctaacatatcttgacctcagttatttgaatactagtggtcaaattccaaaatttattggatcgttcagcaacttacgat 8341923  T
Q  120 accttgatctctcaaatggtggttatgaggggaagattcctactcaacttgggaatctctcacaattgcaacaccttaatctcagatttaatgatcttgt 219  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  8341924 accttgatctctcaaacggtggttatgagggaaagattcctactcaacttgggaatctctcacaattgcaacaccttaatctcagtcttaatgatcttgt 8342023  T
Q  220 tggaacaatccctttccaactcggaaatctttcgttattgcaatctctg 268  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  8342024 tggtacaatccctttccaactcggaaatctttcgttattgcaatctctg 8342072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 146 - 252
Target Start/End: Original strand, 8333037 - 8333143
Alignment:
Q  146 gaggggaagattcctactcaacttgggaatctctcacaattgcaacaccttaatctcagatttaatgatcttgttggaacaatccctttccaactcggaa 245  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| ||    
T  8333037 gagggaaagattcctactcaacttgggaatctctcacaattgcaacaccttaatctcagacttaatgatcttgttggaaaaatccctttccaactcgaaa 8333136  T
Q  246 atctttc 252  Q
    |||||||    
T  8333137 atctttc 8333143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 20 - 204
Target Start/End: Original strand, 26727420 - 26727604
Alignment:
Q  20 tcaataactgagttgcaacatctaacatatctagacctcagttatttgaatactagtggtcaaattccaaaatttattggatcgttcagcaacttacgat 119  Q
    |||||||||||||||||||||||||||||||||||||| ||||  ||||  | ||| ||||| || ||||| |||||||| || |||| ||| |||||||    
T  26727420 tcaataactgagttgcaacatctaacatatctagaccttagttcattgatgattagaggtcatatcccaaattttattggctccttcatcaatttacgat 26727519  T
Q  120 accttgatctctcaaatggtggttatgaggggaagattcctactcaacttgggaatctctcacaattgcaacaccttaatctcag 204  Q
    ||||| ||||||||||||    || | | | |||||||||| |||||||||| || |||||||| |||||||||||| |||||||    
T  26727520 accttaatctctcaaatgccttttttaatgagaagattccttctcaacttggaaaactctcacagttgcaacaccttgatctcag 26727604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 125; Significance: 2e-64; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 20 - 252
Target Start/End: Complemental strand, 30045 - 29813
Alignment:
Q  20 tcaataactgagttgcaacatctaacatatctagacctcagttatttgaatactagtggtcaaattccaaaatttattggatcgttcagcaacttacgat 119  Q
    ||||||||||||||||||||||||| |||||| |||||||| ||||||||||| ||||||||||| |||||||||||||||||  ||||||| |||| ||    
T  30045 tcaataactgagttgcaacatctaaaatatcttgacctcagatatttgaataccagtggtcaaatcccaaaatttattggatccatcagcaaattacaat 29946  T
Q  120 accttgatctctcaaatggtggttatgaggggaagattcctactcaacttgggaatctctcacaattgcaacaccttaatctcagatttaatgatcttgt 219  Q
    ||||||||||||||  |||||||||||| ||||||||||||| ||||||||||||||| |||||||||| ||| ||| |||| ||    ||||||||       
T  29945 accttgatctctcatttggtggttatgatgggaagattcctattcaacttgggaatctatcacaattgcgacatcttgatcttagcaggaatgatctgaa 29846  T
Q  220 tggaacaatccctttccaactcggaaatctttc 252  Q
    ||||  |||||||||||||||||||||||||||    
T  29845 tggagaaatccctttccaactcggaaatctttc 29813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 125; Significance: 2e-64; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 20 - 252
Target Start/End: Original strand, 168747 - 168979
Alignment:
Q  20 tcaataactgagttgcaacatctaacatatctagacctcagttatttgaatactagtggtcaaattccaaaatttattggatcgttcagcaacttacgat 119  Q
    ||||||||||||||||||||||||| |||||| |||||||| ||||||||||| ||||||||||| |||||||||||||||||  ||||||| |||| ||    
T  168747 tcaataactgagttgcaacatctaaaatatcttgacctcagatatttgaataccagtggtcaaatcccaaaatttattggatccatcagcaaattacaat 168846  T
Q  120 accttgatctctcaaatggtggttatgaggggaagattcctactcaacttgggaatctctcacaattgcaacaccttaatctcagatttaatgatcttgt 219  Q
    ||||||||||||||  |||||||||||| ||||||||||||| ||||||||||||||| |||||||||| ||| ||| |||| ||    ||||||||       
T  168847 accttgatctctcatttggtggttatgatgggaagattcctattcaacttgggaatctatcacaattgcgacatcttgatcttagcaggaatgatctgaa 168946  T
Q  220 tggaacaatccctttccaactcggaaatctttc 252  Q
    ||||  |||||||||||||||||||||||||||    
T  168947 tggagaaatccctttccaactcggaaatctttc 168979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 20 - 267
Target Start/End: Original strand, 173756 - 174003
Alignment:
Q  20 tcaataactgagttgcaacatctaacatatctagacctcagttatttgaatactagtggtcaaattccaaaatttattggatcgttcagcaacttacgat 119  Q
    |||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||| |||||||  ||||||||||||| || |||||||| || ||      
T  173756 tcaataactgagttacaaaatctaacatatttagacctcagttatttgaatactagtagtcaaatctcaaaatttattggctccttcagcaagttgcggc 173855  T
Q  120 accttgatctctcaaatggtggttatgaggggaagattcctactcaacttgggaatctctcacaattgcaacaccttaatctcagatttaatgatcttgt 219  Q
    |||||||||| |||||||||  |||||| |||||| |||||  | ||||||| ||||| |||||||||  | ||||| |||| || |  ||||| ||  |    
T  173856 accttgatctgtcaaatggtcattatgatgggaaggttccttttgaacttggaaatctatcacaattgtgataccttgatcttagctacaatgaactcat 173955  T
Q  220 tggaacaatccctttccaactcggaaatctttcgttattgcaatctct 267  Q
    ||||  ||||||||||||||||||||||||||| || ||||| |||||    
T  173956 tggagaaatccctttccaactcggaaatctttcattgttgcagtctct 174003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 125; Significance: 2e-64; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 20 - 267
Target Start/End: Original strand, 44144742 - 44144990
Alignment:
Q  20 tcaataactgagttgcaacatctaacatatctagacctcagttatttgaatactagtggtcaaattccaaaatttattggatcgttcagcaacttacgat 119  Q
    |||||||||| | |||||||||||||| |||||||||| ||||||||||||||| |||||||||| |||||||||||||| || |||||||| ||||||     
T  44144742 tcaataactgtgctgcaacatctaacacatctagacctaagttatttgaatactggtggtcaaatcccaaaatttattggctccttcagcaagttacgac 44144841  T
Q  120 acc-ttgatctctcaaatggtggttatgaggggaagattcctactcaacttgggaatctctcacaattgcaacaccttaatctcagatttaatgatcttg 218  Q
    ||| |||||||||||  |||||||||||| |||||||||||| ||||||||||||||||||||| ||||| ||||||| || | || |  ||||| ||      
T  44144842 acctttgatctctcagttggtggttatgatgggaagattcctgctcaacttgggaatctctcacgattgcgacaccttgattttagctacaatgaactca 44144941  T
Q  219 ttggaacaatccctttccaactcggaaatctttcgttattgcaatctct 267  Q
    |||||  ||||||||||||||||||||||||||| |||||||| |||||    
T  44144942 ttggagaaatccctttccaactcggaaatctttcattattgcagtctct 44144990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 20 - 204
Target Start/End: Complemental strand, 44785941 - 44785757
Alignment:
Q  20 tcaataactgagttgcaacatctaacatatctagacctcagttatttgaatactagtggtcaaattccaaaatttattggatcgttcagcaacttacgat 119  Q
    |||||||||||| ||| |||||||| |||||||||||||||| |||||| ||||| || |||||||||||||||||||||||| ||||||||||||||||    
T  44785941 tcaataactgagctgcgacatctaaaatatctagacctcagtcatttgattactaatgatcaaattccaaaatttattggatccttcagcaacttacgat 44785842  T
Q  120 accttgatctctcaaatggtggttatgaggggaagattcctactcaacttgggaatctctcacaattgcaacaccttaatctcag 204  Q
    ||||||| ||||||  ||||||||| |  || ||||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  44785841 accttgacctctcagttggtggttacggtggaaagattcctactcaacttgggaatctctcacaattgcgacaccttgatctcag 44785757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 20 - 158
Target Start/End: Original strand, 44611648 - 44611786
Alignment:
Q  20 tcaataactgagttgcaacatctaacatatctagacctcagttatttgaatactagtggtcaaattccaaaatttattggatcgttcagcaacttacgat 119  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||||||| || ||| |||||||| |||    
T  44611648 tcaataactgagttgcaacatctaacatatctaaacctcagttatctgaatactagtggtcaaatcccaaaatttattggctccttctgcaacttaagat 44611747  T
Q  120 accttgatctctcaaatggtggttatgaggggaagattc 158  Q
    ||||||||||||||||| |||||| ||| ||||||||||    
T  44611748 accttgatctctcaaatagtggttttgatgggaagattc 44611786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 22 - 204
Target Start/End: Original strand, 35898942 - 35899124
Alignment:
Q  22 aataactgagttgcaacatctaacatatctagacctcagttatttgaatactagtggtcaaattccaaaatttattggatcgttcagcaacttacgatac 121  Q
    ||||||||| ||||||||||| |||||| |||||||  ||| ||||||||||||||||||||| |||||||||||||| || ||||||||||| ||||||    
T  35898942 aataactgaattgcaacatcttacatatttagaccttggttttttgaatactagtggtcaaatcccaaaatttattggctccttcagcaacttgcgatac 35899041  T
Q  122 cttgatctctcaaatggtggttatgaggggaagattcctactcaacttgggaatctctcacaattgcaacaccttaatctcag 204  Q
     |||||||||||||| ||||||  || |||||||||||| |||| ||| |||||||||||   |||||| ||||| |||||||    
T  35899042 attgatctctcaaatagtggtttcgatgggaagattcctgctcagcttaggaatctctcattgttgcaataccttgatctcag 35899124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 267
Target Start/End: Complemental strand, 11544927 - 11544676
Alignment:
Q  20 tcaataactgagttgcaacatctaacatatctagacctcagttatttgaatactagtggtcaaattccaaaatttattggatcgttcagcaacttacgat 119  Q
    |||||||||||||| |||||||||| |||| |||||||||||  | ||| || |     |||||| |||||||||||||| || || | ||| ||| |||    
T  11544927 tcaataactgagttacaacatctaaaatatttagacctcagtagtatgattattttcactcaaatcccaaaatttattggctccttaaccaagttatgat 11544828  T
Q  120 accttgatctctcaaatggtggttatgaggggaagattc----ctactcaacttgggaatctctcacaattgcaacaccttaatctcagatttaatgatc 215  Q
    ||||| ||||||||||| ||  |||| | | ||||||||    || |||||||||| ||||||||||| |||  ||||||| |||| || |  ||||| |    
T  11544827 accttaatctctcaaatagttattatcatgcgaagattcattccttctcaacttggcaatctctcacagttgagacaccttgatcttagctacaatgaac 11544728  T
Q  216 ttgttggaacaatccctttccaactcggaaatctttcgttattgcaatctct 267  Q
    |  |||||  ||| ||||||||||||||||||||||| || ||||| |||||    
T  11544727 tcattggagaaattcctttccaactcggaaatctttcattgttgcagtctct 11544676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 153 - 267
Target Start/End: Original strand, 44612085 - 44612199
Alignment:
Q  153 agattcctactcaacttgggaatctctcacaattgcaacaccttaatctcagatttaatgatcttgttggaacaatccctttccaactcggaaatctttc 252  Q
    |||||||| ||||||||||||||||||||||||||| ||||||| |||| ||    ||||| ||   ||||  ||||||||||||||| |||||||||||    
T  44612085 agattccttctcaacttgggaatctctcacaattgcgacaccttgatctaagtgacaatgaactcactggagaaatccctttccaacttggaaatctttc 44612184  T
Q  253 gttattgcaatctct 267  Q
     || ||||| |||||    
T  44612185 attgttgcagtctct 44612199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 121; Significance: 5e-62; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 24 - 252
Target Start/End: Complemental strand, 29228774 - 29228546
Alignment:
Q  24 taactgagttgcaacatctaacatatctagacctcagttatttgaatactagtggtcaaattccaaaatttattggatcgttcagcaacttacgatacct 123  Q
    |||||||| |||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||||||||||| || |||||||| |||| ||||||    
T  29228774 taactgagctgcaacatctaaaatatctagacctcagttatttgcatactagtggtcaaatcccaaaatttattggctccttcagcaagttacaatacct 29228675  T
Q  124 tgatctctcaaatggtggttatgaggggaagattcctactcaacttgggaatctctcacaattgcaacaccttaatctcagatttaatgatcttgttgga 223  Q
      |||||||||  |||  |||||| |||||||||||| |||||||||| |||||||||||||||||||||||| |||| ||    ||||| ||  |||||    
T  29228674 caatctctcaacaggtcattatgatgggaagattccttctcaacttggaaatctctcacaattgcaacaccttgatcttagcaacaatgaactcattgga 29228575  T
Q  224 acaatccctttccaactcggaaatctttc 252  Q
     ||||||||||||||||||||||||||||    
T  29228574 gcaatccctttccaactcggaaatctttc 29228546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 24 - 252
Target Start/End: Complemental strand, 29342073 - 29341845
Alignment:
Q  24 taactgagttgcaacatctaacatatctagacctcagttatttgaatactagtggtcaaattccaaaatttattggatcgttcagcaacttacgatacct 123  Q
    |||||||| |||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||||||||||| || |||||||| |||| ||||||    
T  29342073 taactgagctgcaacatctaaaatatctagacctcagttatttgcatactagtggtcaaatcccaaaatttattggctccttcagcaagttacaatacct 29341974  T
Q  124 tgatctctcaaatggtggttatgaggggaagattcctactcaacttgggaatctctcacaattgcaacaccttaatctcagatttaatgatcttgttgga 223  Q
      |||||||||  |||  |||||| |||||||||||| |||||||||| |||||||||||||||||||||||| |||| ||    ||||| ||  |||||    
T  29341973 caatctctcaacaggtcattatgatgggaagattccttctcaacttggaaatctctcacaattgcaacaccttgatcttagcaacaatgaactcattgga 29341874  T
Q  224 acaatccctttccaactcggaaatctttc 252  Q
     ||||||||||||||||||||||||||||    
T  29341873 gcaatccctttccaactcggaaatctttc 29341845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 167 - 249
Target Start/End: Complemental strand, 29508197 - 29508115
Alignment:
Q  167 cttgggaatctctcacaattgcaacaccttaatctcagatttaatgatcttgttggaacaatccctttccaactcggaaatct 249  Q
    ||||| |||||||||||||||||||||||| ||||||||  |||||| ||  ||||| |||| || |||||||| ||||||||    
T  29508197 cttggaaatctctcacaattgcaacaccttgatctcagaggtaatgaactcattggagcaattcccttccaacttggaaatct 29508115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 164 - 252
Target Start/End: Complemental strand, 29507624 - 29507536
Alignment:
Q  164 caacttgggaatctctcacaattgcaacaccttaatctcagatttaatgatcttgttggaacaatccctttccaactcggaaatctttc 252  Q
    |||||||| |||||||||||||| ||||||||| ||||||| |  ||||| ||  ||||| |||||||||| ||||||  |||||||||    
T  29507624 caacttggaaatctctcacaattacaacaccttgatctcagctacaatgaactaattggagcaatccctttacaactccaaaatctttc 29507536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 164 - 249
Target Start/End: Complemental strand, 29507696 - 29507611
Alignment:
Q  164 caacttgggaatctctcacaattgcaacaccttaatctcagatttaatgatcttgttggaacaatccctttccaactcggaaatct 249  Q
    |||||||| |||||||||||||||||||||||| |||||||    ||||| ||  ||||| |||| || |||||||| ||||||||    
T  29507696 caacttggaaatctctcacaattgcaacaccttgatctcagcgaaaatgaactcattggagcaattcccttccaacttggaaatct 29507611  T

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Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 164 - 249
Target Start/End: Complemental strand, 29507768 - 29507683
Alignment:
Q  164 caacttgggaatctctcacaattgcaacaccttaatctcagatttaatgatcttgttggaacaatccctttccaactcggaaatct 249  Q
    |||||||| |||||||||||||||||||||||| |||||||    ||||| ||  ||||| |||| || |||||||| ||||||||    
T  29507768 caacttggaaatctctcacaattgcaacaccttgatctcagcagaaatgaactcattggagcaattcccttccaacttggaaatct 29507683  T

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Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 202
Target Start/End: Complemental strand, 29507912 - 29507874
Alignment:
Q  164 caacttgggaatctctcacaattgcaacaccttaatctc 202  Q
    |||||||| |||||||||||||||||||||||| |||||    
T  29507912 caacttggaaatctctcacaattgcaacaccttgatctc 29507874  T

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Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 202
Target Start/End: Complemental strand, 29507984 - 29507946
Alignment:
Q  164 caacttgggaatctctcacaattgcaacaccttaatctc 202  Q
    |||||||| |||||||||||||||||||||||| |||||    
T  29507984 caacttggaaatctctcacaattgcaacaccttgatctc 29507946  T

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Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 202
Target Start/End: Complemental strand, 29508128 - 29508090
Alignment:
Q  164 caacttgggaatctctcacaattgcaacaccttaatctc 202  Q
    |||||||| |||||||||||||||||||||||| |||||    
T  29508128 caacttggaaatctctcacaattgcaacaccttgatctc 29508090  T

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Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 249
Target Start/End: Complemental strand, 29507840 - 29507755
Alignment:
Q  164 caacttgggaatctctcacaattgcaacaccttaatctcagatttaatgatcttgttggaacaatccctttccaactcggaaatct 249  Q
    |||||||| |||||||||||||||||||| ||| ||||||| |  ||||| ||  |||||  ||| || |||||||| ||||||||    
T  29507840 caacttggaaatctctcacaattgcaacatcttgatctcagctacaatgaactcattggaggaattcccttccaacttggaaatct 29507755  T

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Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 249
Target Start/End: Complemental strand, 29508056 - 29507971
Alignment:
Q  164 caacttgggaatctctcacaattgcaacaccttaatctcagatttaatgatcttgttggaacaatccctttccaactcggaaatct 249  Q
    |||||||| |||||||||||||||||||| ||| ||||||| |  ||||| ||  |||||  ||| || |||||||| ||||||||    
T  29508056 caacttggaaatctctcacaattgcaacatcttgatctcagctacaatgaactcattggaggaattcccttccaacttggaaatct 29507971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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