View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21085_low_5 (Length: 290)

Name: NF21085_low_5
Description: NF21085
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21085_low_5
NF21085_low_5
[»] chr3 (3 HSPs)
chr3 (20-268)||(8341824-8342072)
chr3 (146-252)||(8333037-8333143)
chr3 (20-204)||(26727420-26727604)
[»] scaffold0061 (1 HSPs)
scaffold0061 (20-252)||(29813-30045)
[»] scaffold0017 (2 HSPs)
scaffold0017 (20-252)||(168747-168979)
scaffold0017 (20-267)||(173756-174003)
[»] chr1 (6 HSPs)
chr1 (20-267)||(44144742-44144990)
chr1 (20-204)||(44785757-44785941)
chr1 (20-158)||(44611648-44611786)
chr1 (22-204)||(35898942-35899124)
chr1 (20-267)||(11544676-11544927)
chr1 (153-267)||(44612085-44612199)
[»] chr2 (2 HSPs)
chr2 (24-252)||(29228546-29228774)
chr2 (24-252)||(29341845-29342073)
[»] chr5 (9 HSPs)
chr5 (167-249)||(29508115-29508197)
chr5 (164-252)||(29507536-29507624)
chr5 (164-249)||(29507611-29507696)
chr5 (164-249)||(29507683-29507768)
chr5 (164-202)||(29507874-29507912)
chr5 (164-202)||(29507946-29507984)
chr5 (164-202)||(29508090-29508128)
chr5 (164-249)||(29507755-29507840)
chr5 (164-249)||(29507971-29508056)


Alignment Details
Target: chr3 (Bit Score: 221; Significance: 1e-121; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 20 - 268
Target Start/End: Original strand, 8341824 - 8342072
Alignment:
Q  20 tcaataactgagttgcaacatctaacatatctagacctcagttatttgaatactagtggtcaaattccaaaatttattggatcgttcagcaacttacgat 119  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8341824 tcaataactgagttgtaacatctaacatatcttgacctcagttatttgaatactagtggtcaaattccaaaatttattggatcgttcagcaacttacgat 8341923  T
Q  120 accttgatctctcaaatggtggttatgaggggaagattcctactcaacttgggaatctctcacaattgcaacaccttaatctcagatttaatgatcttgt 219  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  8341924 accttgatctctcaaacggtggttatgagggaaagattcctactcaacttgggaatctctcacaattgcaacaccttaatctcagtcttaatgatcttgt 8342023  T
Q  220 tggaacaatccctttccaactcggaaatctttcgttattgcaatctctg 268  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  8342024 tggtacaatccctttccaactcggaaatctttcgttattgcaatctctg 8342072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 146 - 252
Target Start/End: Original strand, 8333037 - 8333143
Alignment:
Q  146 gaggggaagattcctactcaacttgggaatctctcacaattgcaacaccttaatctcagatttaatgatcttgttggaacaatccctttccaactcggaa 245  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| ||    
T  8333037 gagggaaagattcctactcaacttgggaatctctcacaattgcaacaccttaatctcagacttaatgatcttgttggaaaaatccctttccaactcgaaa 8333136  T
Q  246 atctttc 252  Q
    |||||||    
T  8333137 atctttc 8333143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 20 - 204
Target Start/End: Original strand, 26727420 - 26727604
Alignment:
Q  20 tcaataactgagttgcaacatctaacatatctagacctcagttatttgaatactagtggtcaaattccaaaatttattggatcgttcagcaacttacgat 119  Q
    |||||||||||||||||||||||||||||||||||||| ||||  ||||  | ||| ||||| || ||||| |||||||| || |||| ||| |||||||    
T  26727420 tcaataactgagttgcaacatctaacatatctagaccttagttcattgatgattagaggtcatatcccaaattttattggctccttcatcaatttacgat 26727519  T
Q  120 accttgatctctcaaatggtggttatgaggggaagattcctactcaacttgggaatctctcacaattgcaacaccttaatctcag 204  Q
    ||||| ||||||||||||    || | | | |||||||||| |||||||||| || |||||||| |||||||||||| |||||||    
T  26727520 accttaatctctcaaatgccttttttaatgagaagattccttctcaacttggaaaactctcacagttgcaacaccttgatctcag 26727604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 125; Significance: 2e-64; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 20 - 252
Target Start/End: Complemental strand, 30045 - 29813
Alignment:
Q  20 tcaataactgagttgcaacatctaacatatctagacctcagttatttgaatactagtggtcaaattccaaaatttattggatcgttcagcaacttacgat 119  Q
    ||||||||||||||||||||||||| |||||| |||||||| ||||||||||| ||||||||||| |||||||||||||||||  ||||||| |||| ||    
T  30045 tcaataactgagttgcaacatctaaaatatcttgacctcagatatttgaataccagtggtcaaatcccaaaatttattggatccatcagcaaattacaat 29946  T
Q  120 accttgatctctcaaatggtggttatgaggggaagattcctactcaacttgggaatctctcacaattgcaacaccttaatctcagatttaatgatcttgt 219  Q
    ||||||||||||||  |||||||||||| ||||||||||||| ||||||||||||||| |||||||||| ||| ||| |||| ||    ||||||||       
T  29945 accttgatctctcatttggtggttatgatgggaagattcctattcaacttgggaatctatcacaattgcgacatcttgatcttagcaggaatgatctgaa 29846  T
Q  220 tggaacaatccctttccaactcggaaatctttc 252  Q
    ||||  |||||||||||||||||||||||||||    
T  29845 tggagaaatccctttccaactcggaaatctttc 29813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 125; Significance: 2e-64; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 20 - 252
Target Start/End: Original strand, 168747 - 168979
Alignment:
Q  20 tcaataactgagttgcaacatctaacatatctagacctcagttatttgaatactagtggtcaaattccaaaatttattggatcgttcagcaacttacgat 119  Q
    ||||||||||||||||||||||||| |||||| |||||||| ||||||||||| ||||||||||| |||||||||||||||||  ||||||| |||| ||    
T  168747 tcaataactgagttgcaacatctaaaatatcttgacctcagatatttgaataccagtggtcaaatcccaaaatttattggatccatcagcaaattacaat 168846  T
Q  120 accttgatctctcaaatggtggttatgaggggaagattcctactcaacttgggaatctctcacaattgcaacaccttaatctcagatttaatgatcttgt 219  Q
    ||||||||||||||  |||||||||||| ||||||||||||| ||||||||||||||| |||||||||| ||| ||| |||| ||    ||||||||       
T  168847 accttgatctctcatttggtggttatgatgggaagattcctattcaacttgggaatctatcacaattgcgacatcttgatcttagcaggaatgatctgaa 168946  T
Q  220 tggaacaatccctttccaactcggaaatctttc 252  Q
    ||||  |||||||||||||||||||||||||||    
T  168947 tggagaaatccctttccaactcggaaatctttc 168979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 20 - 267
Target Start/End: Original strand, 173756 - 174003
Alignment:
Q  20 tcaataactgagttgcaacatctaacatatctagacctcagttatttgaatactagtggtcaaattccaaaatttattggatcgttcagcaacttacgat 119  Q
    |||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||| |||||||  ||||||||||||| || |||||||| || ||      
T  173756 tcaataactgagttacaaaatctaacatatttagacctcagttatttgaatactagtagtcaaatctcaaaatttattggctccttcagcaagttgcggc 173855  T
Q  120 accttgatctctcaaatggtggttatgaggggaagattcctactcaacttgggaatctctcacaattgcaacaccttaatctcagatttaatgatcttgt 219  Q
    |||||||||| |||||||||  |||||| |||||| |||||  | ||||||| ||||| |||||||||  | ||||| |||| || |  ||||| ||  |    
T  173856 accttgatctgtcaaatggtcattatgatgggaaggttccttttgaacttggaaatctatcacaattgtgataccttgatcttagctacaatgaactcat 173955  T
Q  220 tggaacaatccctttccaactcggaaatctttcgttattgcaatctct 267  Q
    ||||  ||||||||||||||||||||||||||| || ||||| |||||    
T  173956 tggagaaatccctttccaactcggaaatctttcattgttgcagtctct 174003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 125; Significance: 2e-64; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 20 - 267
Target Start/End: Original strand, 44144742 - 44144990
Alignment:
Q  20 tcaataactgagttgcaacatctaacatatctagacctcagttatttgaatactagtggtcaaattccaaaatttattggatcgttcagcaacttacgat 119  Q
    |||||||||| | |||||||||||||| |||||||||| ||||||||||||||| |||||||||| |||||||||||||| || |||||||| ||||||     
T  44144742 tcaataactgtgctgcaacatctaacacatctagacctaagttatttgaatactggtggtcaaatcccaaaatttattggctccttcagcaagttacgac 44144841  T
Q  120 acc-ttgatctctcaaatggtggttatgaggggaagattcctactcaacttgggaatctctcacaattgcaacaccttaatctcagatttaatgatcttg 218  Q
    ||| |||||||||||  |||||||||||| |||||||||||| ||||||||||||||||||||| ||||| ||||||| || | || |  ||||| ||      
T  44144842 acctttgatctctcagttggtggttatgatgggaagattcctgctcaacttgggaatctctcacgattgcgacaccttgattttagctacaatgaactca 44144941  T
Q  219 ttggaacaatccctttccaactcggaaatctttcgttattgcaatctct 267  Q
    |||||  ||||||||||||||||||||||||||| |||||||| |||||    
T  44144942 ttggagaaatccctttccaactcggaaatctttcattattgcagtctct 44144990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 20 - 204
Target Start/End: Complemental strand, 44785941 - 44785757
Alignment:
Q  20 tcaataactgagttgcaacatctaacatatctagacctcagttatttgaatactagtggtcaaattccaaaatttattggatcgttcagcaacttacgat 119  Q
    |||||||||||| ||| |||||||| |||||||||||||||| |||||| ||||| || |||||||||||||||||||||||| ||||||||||||||||    
T  44785941 tcaataactgagctgcgacatctaaaatatctagacctcagtcatttgattactaatgatcaaattccaaaatttattggatccttcagcaacttacgat 44785842  T
Q  120 accttgatctctcaaatggtggttatgaggggaagattcctactcaacttgggaatctctcacaattgcaacaccttaatctcag 204  Q
    ||||||| ||||||  ||||||||| |  || ||||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  44785841 accttgacctctcagttggtggttacggtggaaagattcctactcaacttgggaatctctcacaattgcgacaccttgatctcag 44785757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 20 - 158
Target Start/End: Original strand, 44611648 - 44611786
Alignment:
Q  20 tcaataactgagttgcaacatctaacatatctagacctcagttatttgaatactagtggtcaaattccaaaatttattggatcgttcagcaacttacgat 119  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||||||| || ||| |||||||| |||    
T  44611648 tcaataactgagttgcaacatctaacatatctaaacctcagttatctgaatactagtggtcaaatcccaaaatttattggctccttctgcaacttaagat 44611747  T
Q  120 accttgatctctcaaatggtggttatgaggggaagattc 158  Q
    ||||||||||||||||| |||||| ||| ||||||||||    
T  44611748 accttgatctctcaaatagtggttttgatgggaagattc 44611786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 22 - 204
Target Start/End: Original strand, 35898942 - 35899124
Alignment:
Q  22 aataactgagttgcaacatctaacatatctagacctcagttatttgaatactagtggtcaaattccaaaatttattggatcgttcagcaacttacgatac 121  Q
    ||||||||| ||||||||||| |||||| |||||||  ||| ||||||||||||||||||||| |||||||||||||| || ||||||||||| ||||||    
T  35898942 aataactgaattgcaacatcttacatatttagaccttggttttttgaatactagtggtcaaatcccaaaatttattggctccttcagcaacttgcgatac 35899041  T
Q  122 cttgatctctcaaatggtggttatgaggggaagattcctactcaacttgggaatctctcacaattgcaacaccttaatctcag 204  Q
     |||||||||||||| ||||||  || |||||||||||| |||| ||| |||||||||||   |||||| ||||| |||||||    
T  35899042 attgatctctcaaatagtggtttcgatgggaagattcctgctcagcttaggaatctctcattgttgcaataccttgatctcag 35899124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 267
Target Start/End: Complemental strand, 11544927 - 11544676
Alignment:
Q  20 tcaataactgagttgcaacatctaacatatctagacctcagttatttgaatactagtggtcaaattccaaaatttattggatcgttcagcaacttacgat 119  Q
    |||||||||||||| |||||||||| |||| |||||||||||  | ||| || |     |||||| |||||||||||||| || || | ||| ||| |||    
T  11544927 tcaataactgagttacaacatctaaaatatttagacctcagtagtatgattattttcactcaaatcccaaaatttattggctccttaaccaagttatgat 11544828  T
Q  120 accttgatctctcaaatggtggttatgaggggaagattc----ctactcaacttgggaatctctcacaattgcaacaccttaatctcagatttaatgatc 215  Q
    ||||| ||||||||||| ||  |||| | | ||||||||    || |||||||||| ||||||||||| |||  ||||||| |||| || |  ||||| |    
T  11544827 accttaatctctcaaatagttattatcatgcgaagattcattccttctcaacttggcaatctctcacagttgagacaccttgatcttagctacaatgaac 11544728  T
Q  216 ttgttggaacaatccctttccaactcggaaatctttcgttattgcaatctct 267  Q
    |  |||||  ||| ||||||||||||||||||||||| || ||||| |||||    
T  11544727 tcattggagaaattcctttccaactcggaaatctttcattgttgcagtctct 11544676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 153 - 267
Target Start/End: Original strand, 44612085 - 44612199
Alignment:
Q  153 agattcctactcaacttgggaatctctcacaattgcaacaccttaatctcagatttaatgatcttgttggaacaatccctttccaactcggaaatctttc 252  Q
    |||||||| ||||||||||||||||||||||||||| ||||||| |||| ||    ||||| ||   ||||  ||||||||||||||| |||||||||||    
T  44612085 agattccttctcaacttgggaatctctcacaattgcgacaccttgatctaagtgacaatgaactcactggagaaatccctttccaacttggaaatctttc 44612184  T
Q  253 gttattgcaatctct 267  Q
     || ||||| |||||    
T  44612185 attgttgcagtctct 44612199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 121; Significance: 5e-62; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 24 - 252
Target Start/End: Complemental strand, 29228774 - 29228546
Alignment:
Q  24 taactgagttgcaacatctaacatatctagacctcagttatttgaatactagtggtcaaattccaaaatttattggatcgttcagcaacttacgatacct 123  Q
    |||||||| |||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||||||||||| || |||||||| |||| ||||||    
T  29228774 taactgagctgcaacatctaaaatatctagacctcagttatttgcatactagtggtcaaatcccaaaatttattggctccttcagcaagttacaatacct 29228675  T
Q  124 tgatctctcaaatggtggttatgaggggaagattcctactcaacttgggaatctctcacaattgcaacaccttaatctcagatttaatgatcttgttgga 223  Q
      |||||||||  |||  |||||| |||||||||||| |||||||||| |||||||||||||||||||||||| |||| ||    ||||| ||  |||||    
T  29228674 caatctctcaacaggtcattatgatgggaagattccttctcaacttggaaatctctcacaattgcaacaccttgatcttagcaacaatgaactcattgga 29228575  T
Q  224 acaatccctttccaactcggaaatctttc 252  Q
     ||||||||||||||||||||||||||||    
T  29228574 gcaatccctttccaactcggaaatctttc 29228546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 24 - 252
Target Start/End: Complemental strand, 29342073 - 29341845
Alignment:
Q  24 taactgagttgcaacatctaacatatctagacctcagttatttgaatactagtggtcaaattccaaaatttattggatcgttcagcaacttacgatacct 123  Q
    |||||||| |||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||||||||||| || |||||||| |||| ||||||    
T  29342073 taactgagctgcaacatctaaaatatctagacctcagttatttgcatactagtggtcaaatcccaaaatttattggctccttcagcaagttacaatacct 29341974  T
Q  124 tgatctctcaaatggtggttatgaggggaagattcctactcaacttgggaatctctcacaattgcaacaccttaatctcagatttaatgatcttgttgga 223  Q
      |||||||||  |||  |||||| |||||||||||| |||||||||| |||||||||||||||||||||||| |||| ||    ||||| ||  |||||    
T  29341973 caatctctcaacaggtcattatgatgggaagattccttctcaacttggaaatctctcacaattgcaacaccttgatcttagcaacaatgaactcattgga 29341874  T
Q  224 acaatccctttccaactcggaaatctttc 252  Q
     ||||||||||||||||||||||||||||    
T  29341873 gcaatccctttccaactcggaaatctttc 29341845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 167 - 249
Target Start/End: Complemental strand, 29508197 - 29508115
Alignment:
Q  167 cttgggaatctctcacaattgcaacaccttaatctcagatttaatgatcttgttggaacaatccctttccaactcggaaatct 249  Q
    ||||| |||||||||||||||||||||||| ||||||||  |||||| ||  ||||| |||| || |||||||| ||||||||    
T  29508197 cttggaaatctctcacaattgcaacaccttgatctcagaggtaatgaactcattggagcaattcccttccaacttggaaatct 29508115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 164 - 252
Target Start/End: Complemental strand, 29507624 - 29507536
Alignment:
Q  164 caacttgggaatctctcacaattgcaacaccttaatctcagatttaatgatcttgttggaacaatccctttccaactcggaaatctttc 252  Q
    |||||||| |||||||||||||| ||||||||| ||||||| |  ||||| ||  ||||| |||||||||| ||||||  |||||||||    
T  29507624 caacttggaaatctctcacaattacaacaccttgatctcagctacaatgaactaattggagcaatccctttacaactccaaaatctttc 29507536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 164 - 249
Target Start/End: Complemental strand, 29507696 - 29507611
Alignment:
Q  164 caacttgggaatctctcacaattgcaacaccttaatctcagatttaatgatcttgttggaacaatccctttccaactcggaaatct 249  Q
    |||||||| |||||||||||||||||||||||| |||||||    ||||| ||  ||||| |||| || |||||||| ||||||||    
T  29507696 caacttggaaatctctcacaattgcaacaccttgatctcagcgaaaatgaactcattggagcaattcccttccaacttggaaatct 29507611  T

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Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 164 - 249
Target Start/End: Complemental strand, 29507768 - 29507683
Alignment:
Q  164 caacttgggaatctctcacaattgcaacaccttaatctcagatttaatgatcttgttggaacaatccctttccaactcggaaatct 249  Q
    |||||||| |||||||||||||||||||||||| |||||||    ||||| ||  ||||| |||| || |||||||| ||||||||    
T  29507768 caacttggaaatctctcacaattgcaacaccttgatctcagcagaaatgaactcattggagcaattcccttccaacttggaaatct 29507683  T

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Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 202
Target Start/End: Complemental strand, 29507912 - 29507874
Alignment:
Q  164 caacttgggaatctctcacaattgcaacaccttaatctc 202  Q
    |||||||| |||||||||||||||||||||||| |||||    
T  29507912 caacttggaaatctctcacaattgcaacaccttgatctc 29507874  T

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Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 202
Target Start/End: Complemental strand, 29507984 - 29507946
Alignment:
Q  164 caacttgggaatctctcacaattgcaacaccttaatctc 202  Q
    |||||||| |||||||||||||||||||||||| |||||    
T  29507984 caacttggaaatctctcacaattgcaacaccttgatctc 29507946  T

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Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 202
Target Start/End: Complemental strand, 29508128 - 29508090
Alignment:
Q  164 caacttgggaatctctcacaattgcaacaccttaatctc 202  Q
    |||||||| |||||||||||||||||||||||| |||||    
T  29508128 caacttggaaatctctcacaattgcaacaccttgatctc 29508090  T

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Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 249
Target Start/End: Complemental strand, 29507840 - 29507755
Alignment:
Q  164 caacttgggaatctctcacaattgcaacaccttaatctcagatttaatgatcttgttggaacaatccctttccaactcggaaatct 249  Q
    |||||||| |||||||||||||||||||| ||| ||||||| |  ||||| ||  |||||  ||| || |||||||| ||||||||    
T  29507840 caacttggaaatctctcacaattgcaacatcttgatctcagctacaatgaactcattggaggaattcccttccaacttggaaatct 29507755  T

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Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 249
Target Start/End: Complemental strand, 29508056 - 29507971
Alignment:
Q  164 caacttgggaatctctcacaattgcaacaccttaatctcagatttaatgatcttgttggaacaatccctttccaactcggaaatct 249  Q
    |||||||| |||||||||||||||||||| ||| ||||||| |  ||||| ||  |||||  ||| || |||||||| ||||||||    
T  29508056 caacttggaaatctctcacaattgcaacatcttgatctcagctacaatgaactcattggaggaattcccttccaacttggaaatct 29507971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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