View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF21086_high_9 (Length: 344)
Name: NF21086_high_9
Description: NF21086
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21086_high_9 |
 |  |
|
| [»] scaffold1961 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr7 (Bit Score: 301; Significance: 1e-169; HSPs: 6)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 1 - 329
Target Start/End: Original strand, 14627317 - 14627645
Alignment:
| Q |
1 |
tgttatttattcaaaccagataaggactcaactgtcgaatacgcttttggagtttgtattcaaggagcgtgccggggaagatgttaacagagaactgatt |
100 |
Q |
| |
|
|||||||||||||||||||||||||| || | |||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |
|
|
| T |
14627317 |
tgttatttattcaaaccagataaggaatcgattgtcgaatacgcttttggagtttgtatttaaagagcgtgccggggaagatgttaacagagaactgatt |
14627416 |
T |
 |
| Q |
101 |
agaaatgttacaaagatgctgatggatttaggtccttctgtttatgagcaagtatttgagactccttttctgcaagttttagctgaatcttacaaggctg |
200 |
Q |
| |
|
|||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14627417 |
agaaatgttacaaagatgctaattgatttaggtccttctgtttatgagcaagtatttgagactccttttctgcaagttttagctgaatcttacaaggctg |
14627516 |
T |
 |
| Q |
201 |
aatcccataaatatattgagtttgtgtagttgctttagttggaatcctattaaggatacatgttgcaattttaagtgcttctccctagtgtgattctagt |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14627517 |
aatcccataaatatattgagtttgtgtagttgctttagttggaatcctattaaggatacatgttgcaattttaagtgcttctccctagtgtgattctagt |
14627616 |
T |
 |
| Q |
301 |
aagttagaaagagcagtcatacttcttac |
329 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
14627617 |
aagttagaaagagcagtcatacttcttac |
14627645 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 14652734 - 14652950
Alignment:
| Q |
1 |
tgttatttattcaaaccagataaggactcaactgtcgaatacgcttttggagtttgtattcaaggagcgtgccggggaagatgttaacagagaactgatt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14652734 |
tgttatttattcaaaccagataaggactcgattgtcgaatacgcttttggagtttgtatttaaggagcgtgccggggaagatgttaacagagaactgatt |
14652833 |
T |
 |
| Q |
101 |
agaaatgttacaaagatgctgatggatttaggtccttctgtttatgagcaagtatttgagactccttttctgcaagttttagctgaatcttacaaggctg |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14652834 |
agaaatgttacaaagatgctgatggatttaggtccttctgtttatgagcaagtatttgagactccttttctgcaagttttagctgaatcttacaaggctg |
14652933 |
T |
 |
| Q |
201 |
aatcccataaatatatt |
217 |
Q |
| |
|
||||||| ||||||||| |
|
|
| T |
14652934 |
aatcccagaaatatatt |
14652950 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 14661169 - 14661389
Alignment:
| Q |
1 |
tgttatttattcaaaccagataaggactcaactgtcgaatacgcttttggagtttgtattcaaggagcgtgccggggaagatgttaacagagaactgatt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14661169 |
tgttatttattcaaaccagataaggactcgactgtcgaatacgcttttggagtttgtattcaaggagcgtgccggggaagatgttaacagagaactgatt |
14661268 |
T |
 |
| Q |
101 |
agaaatgttacaaagatgctgatggatttaggtccttctgtttatgagcaagtatttgagactccttttctgcaagttttagctgaatcttacaaggctg |
200 |
Q |
| |
|
|||||||||||||||||||| || |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14661269 |
agaaatgttacaaagatgctaattgatttaggtccttctgtttatgagcaagaatttgagactccttttctgcaagttttagctgaatcttacaaggctg |
14661368 |
T |
 |
| Q |
201 |
aatcccataaatatattgagt |
221 |
Q |
| |
|
|||| | ||||||||||||| |
|
|
| T |
14661369 |
aatctgagaaatatattgagt |
14661389 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 14750330 - 14750119
Alignment:
| Q |
1 |
tgttatttattcaaaccagataaggactcaactgtcgaatacgcttttggagtttgtattcaaggagcgtgccggggaagatgttaacagagaactgatt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| | |||||||||||| ||||||| |||| |
|
|
| T |
14750330 |
tgttatttattcaaaccagataaggactcgactgtcgaatacgcttttggagtttgtattcaaggagcatgctgcggaagatgttaatagagaaccgatt |
14750231 |
T |
 |
| Q |
101 |
agaaatgttacaaagatgctgatggatttaggtccttctgtttatgagcaagtatttgagactccttttctgcaagttttagctgaatcttacaaggctg |
200 |
Q |
| |
|
|||||| | |||||||||| |||||||||||||| | |||||||||| ||| |||||||||||||||| | ||||||| |||||| | || | ||||| |
|
|
| T |
14750230 |
agaaatctatcaaagatgctaatggatttaggtccctttgtttatgaggaagaatttgagactccttttttacaagtttcagctgagttctatagggctg |
14750131 |
T |
 |
| Q |
201 |
aatcccataaat |
212 |
Q |
| |
|
||||||| |||| |
|
|
| T |
14750130 |
aatcccagaaat |
14750119 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 14758252 - 14758032
Alignment:
| Q |
1 |
tgttatttattcaaaccagataaggactcaactgtcgaatacgcttttggagtttgtattcaaggagcgtgccggggaagatgttaacagagaactgatt |
100 |
Q |
| |
|
||||||||| ||||| ||||| ||||||| ||||||||||| ||||||||| || |||| |||||| ||||| |||||||||||||| | |||||||||| |
|
|
| T |
14758252 |
tgttatttactcaaaacagatcaggactcgactgtcgaatatgcttttggaattagtatgcaaggaacgtgctggggaagatgttaatatagaactgatt |
14758153 |
T |
 |
| Q |
101 |
agaaatgttacaaagatgctgatggatttaggtccttctgtttatgagcaagtatttgagactccttttctgcaagttttagctgaatcttacaaggctg |
200 |
Q |
| |
|
| |||| ||||||||||||| |||||||||||| |||||||||| ||||||| ||| |||||| | ||||| ||||||| |||||| | |||| ||||| |
|
|
| T |
14758152 |
aaaaatattacaaagatgctaatggatttaggttcttctgtttaagagcaagaattcgagacttcgtttctacaagtttcagctgagttctacagggctg |
14758053 |
T |
 |
| Q |
201 |
aatcccataaatatattgagt |
221 |
Q |
| |
|
|||| || |||| ||| |||| |
|
|
| T |
14758052 |
aatctcagaaatttatcgagt |
14758032 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 9 - 173
Target Start/End: Complemental strand, 14765404 - 14765240
Alignment:
| Q |
9 |
attcaaaccagataaggactcaactgtcgaatacgcttttggagtttgtattcaaggagcgtgccggggaagatgttaacagagaactgattagaaatgt |
108 |
Q |
| |
|
||||||||||||||||||||| ||||| ||||| ||||||||| || ||| || ||||||||||| |||| |||||| |||| ||||||||||| | | |
|
|
| T |
14765404 |
attcaaaccagataaggactcgactgttgaatatgcttttggaattagtacacagtgagcgtgccggcgaagttgttaatagaggactgattagaagtat |
14765305 |
T |
 |
| Q |
109 |
tacaaagatgctgatggatttaggtccttctgtttatgagcaagtatttgagactccttttctgc |
173 |
Q |
| |
|
||||||||||| || ||| ||||||||| ||||||||| ||| |||||||| ||||||||||| |
|
|
| T |
14765304 |
aacaaagatgctaattgatacaggtccttccgtttatgaggaagaatttgagaatccttttctgc |
14765240 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 285; Significance: 1e-160; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 1 - 329
Target Start/End: Complemental strand, 17702176 - 17701848
Alignment:
| Q |
1 |
tgttatttattcaaaccagataaggactcaactgtcgaatacgcttttggagtttgtattcaaggagcgtgccggggaagatgttaacagagaactgatt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | || |||||||||||||||||||||||||||||||||||| |
|
|
| T |
17702176 |
tgttatttattcaaaccagataaggactcgactgtcgaatacgcttttggagtttgtacttaaagagcgtgccggggaagatgttaacagagaactgatt |
17702077 |
T |
 |
| Q |
101 |
agaaatgttacaaagatgctgatggatttaggtccttctgtttatgagcaagtatttgagactccttttctgcaagttttagctgaatcttacaaggctg |
200 |
Q |
| |
|
|||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17702076 |
agaaatgttacaaagatgctaattgatttaggtccttctgtttatgagcaagtatttgagactccttttctgcaagttttagctgaatcttacaaggctg |
17701977 |
T |
 |
| Q |
201 |
aatcccataaatatattgagtttgtgtagttgctttagttggaatcctattaaggatacatgttgcaattttaagtgcttctccctagtgtgattctagt |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17701976 |
aatcccataaatatattgagtttgtgtagttgctttagttggaatcttattaaggaaacatgttgcaattttaagtgcttctccctagtgtgattctagt |
17701877 |
T |
 |
| Q |
301 |
aagttagaaagagcagtcatacttcttac |
329 |
Q |
| |
|
|||||||||| || | ||||||||||||| |
|
|
| T |
17701876 |
aagttagaaatagaaatcatacttcttac |
17701848 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 17684092 - 17683872
Alignment:
| Q |
1 |
tgttatttattcaaaccagataaggactcaactgtcgaatacgcttttggagtttgtattcaaggagcgtgccggggaagatgttaacagagaactgatt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
17684092 |
tgttatttattcaaaccagataaggactcaactgtcgaatacgcttttggagtttgtatttaaggagtgtgccggggaagatgttaacagagaactgatt |
17683993 |
T |
 |
| Q |
101 |
agaaatgttacaaagatgctgatggatttaggtccttctgtttatgagcaagtatttgagactccttttctgcaagttttagctgaatcttacaaggctg |
200 |
Q |
| |
|
|||||||||||||||||||| || |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17683992 |
agaaatgttacaaagatgctaattgatttaggtccttctgtttatgagcaagaatttgagactccttttctgcaagttttagctgaatcttacaaggctg |
17683893 |
T |
 |
| Q |
201 |
aatcccataaatatattgagt |
221 |
Q |
| |
|
||||| | |||||||| |||| |
|
|
| T |
17683892 |
aatccgagaaatatatcgagt |
17683872 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 17691018 - 17690802
Alignment:
| Q |
1 |
tgttatttattcaaaccagataaggactcaactgtcgaatacgcttttggagtttgtattcaaggagcgtgccggggaagatgttaacagagaactgatt |
100 |
Q |
| |
|
|||||||||||||||||||||||||| || | ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17691018 |
tgttatttattcaaaccagataaggaatcgattgtcgaatatgcttttggagtttgtattcaaggagcgtgccggggaagatgttaacagagaactgatt |
17690919 |
T |
 |
| Q |
101 |
agaaatgttacaaagatgctgatggatttaggtccttctgtttatgagcaagtatttgagactccttttctgcaagttttagctgaatcttacaaggctg |
200 |
Q |
| |
|
|||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17690918 |
agaaatgttacaaagatgctaattgatttaggtccttctgtttatgagcaagtatttgagactccttttctgcaagttttagctgaatcttacaaggctg |
17690819 |
T |
 |
| Q |
201 |
aatcccataaatatatt |
217 |
Q |
| |
|
||||||| ||||||||| |
|
|
| T |
17690818 |
aatcccagaaatatatt |
17690802 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 17570283 - 17570503
Alignment:
| Q |
1 |
tgttatttattcaaaccagataaggactcaactgtcgaatacgcttttggagtttgtattcaaggagcgtgccggggaagatgttaacagagaactgatt |
100 |
Q |
| |
|
||||||||| ||||| ||||| ||||||| ||||||||||| ||||||||| || |||| |||||| ||||| |||||||||||||| | |||||||||| |
|
|
| T |
17570283 |
tgttatttactcaaaacagatcaggactcgactgtcgaatatgcttttggaattagtatgcaaggaacgtgctggggaagatgttaatatagaactgatt |
17570382 |
T |
 |
| Q |
101 |
agaaatgttacaaagatgctgatggatttaggtccttctgtttatgagcaagtatttgagactccttttctgcaagttttagctgaatcttacaaggctg |
200 |
Q |
| |
|
| |||| ||||||||||||| |||||||||||| |||||||||||||||||| ||| |||||| | ||||| ||||||| |||||| | |||| ||||| |
|
|
| T |
17570383 |
aaaaatattacaaagatgctaatggatttaggttcttctgtttatgagcaagaattcgagacttcgtttctacaagtttcagctgagttctacagggctg |
17570482 |
T |
 |
| Q |
201 |
aatcccataaatatattgagt |
221 |
Q |
| |
|
|||| || |||| ||| |||| |
|
|
| T |
17570483 |
aatctcagaaatttatcgagt |
17570503 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 9 - 173
Target Start/End: Original strand, 17563195 - 17563359
Alignment:
| Q |
9 |
attcaaaccagataaggactcaactgtcgaatacgcttttggagtttgtattcaaggagcgtgccggggaagatgttaacagagaactgattagaaatgt |
108 |
Q |
| |
|
||||||||||||||||||||| ||||| ||||| ||||||||| || ||| || ||||||||||| |||| |||||| |||| ||||||||||| | | |
|
|
| T |
17563195 |
attcaaaccagataaggactcgactgttgaatatgcttttggaattagtacgcagtgagcgtgccggcgaagttgttaatagaggactgattagaagtat |
17563294 |
T |
 |
| Q |
109 |
tacaaagatgctgatggatttaggtccttctgtttatgagcaagtatttgagactccttttctgc |
173 |
Q |
| |
|
||||||||||| || ||| ||||||||| ||||||| | ||| |||||||| ||||||||||| |
|
|
| T |
17563295 |
aacaaagatgctaattgatacaggtccttccgtttatggggaagaatttgagaatccttttctgc |
17563359 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 74; Significance: 7e-34; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 15195858 - 15195685
Alignment:
| Q |
1 |
tgttatttattcaaaccagataaggactcaactgtcgaatacgcttttggagtttgtattcaaggagcgtgccggggaagatgttaacagagaactgatt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||| | ||||||||||||||| ||| || |||| |||| | ||| || |||| |||||||| | || ||||| |
|
|
| T |
15195858 |
tgttatttattcaaaccagataaggactcgattgtcgaatacgctttgggaattagtatgcaagtactatgctggagaagttgttaacataaaagtgatt |
15195759 |
T |
 |
| Q |
101 |
agaaatgttacaaagatgctgatggatttaggtccttctgtttatgagcaagtatttgagactccttttctgca |
174 |
Q |
| |
|
|||||| | ||||| ||||| ||||||||||| ||||| ||||||| ||||| |||||||| |||||||||||| |
|
|
| T |
15195758 |
agaaatataacaaatatgctaatggatttaggaccttccgtttatgtgcaagaatttgagaatccttttctgca |
15195685 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 15196509 - 15196324
Alignment:
| Q |
1 |
tgttatttattcaaaccagataaggactcaactgtcgaatacgcttttggagtttgtattcaaggagcgtgccggggaagatgttaacagagaactgatt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||| | ||||||||| |||||||| || |||| |||||| ||| || |||| |||| | ||| |||||||| |
|
|
| T |
15196509 |
tgttatttattcaaaccagataaggactcgattgtcgaatatgcttttggtattagtatgcaaggactatgctggagaagttgttgatagaaaactgatt |
15196410 |
T |
 |
| Q |
101 |
agaaatgttacaaagatgctgatggatttaggtccttctgtttatgagcaagtatttgagactccttttctgcaagttttagctga |
186 |
Q |
| |
|
||| || | ||||| ||||| ||||||||||||||||| |||||| ||||| |||||||| |||||| |||||||||| |||||| |
|
|
| T |
15196409 |
agatatataacaaatatgctaatggatttaggtccttccgtttatatgcaagaatttgagaatcctttgctgcaagtttcagctga |
15196324 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 15216276 - 15216103
Alignment:
| Q |
1 |
tgttatttattcaaaccagataaggactcaactgtcgaatacgcttttggagtttgtattcaaggagcgtgccggggaagatgttaacagagaactgatt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||| | ||||||||||||||| ||| || |||| |||| | ||| || |||| |||||||| | || ||||| |
|
|
| T |
15216276 |
tgttatttattcaaaccagataaggactcgattgtcgaatacgctttgggaattagtatgcaagtactatgctggagaagttgttaacataaaagtgatt |
15216177 |
T |
 |
| Q |
101 |
agaaatgttacaaagatgctgatggatttaggtccttctgtttatgagcaagtatttgagactccttttctgca |
174 |
Q |
| |
|
|||||| | ||||| ||||| ||||||||||| ||||| ||||||| ||||| |||||||| |||||||||||| |
|
|
| T |
15216176 |
agaaatataacaaatatgctaatggatttaggaccttccgtttatgtgcaagaatttgagaatccttttctgca |
15216103 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 15216927 - 15216742
Alignment:
| Q |
1 |
tgttatttattcaaaccagataaggactcaactgtcgaatacgcttttggagtttgtattcaaggagcgtgccggggaagatgttaacagagaactgatt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||| | ||||||||| |||||||| || |||| |||||| ||| || |||| |||| | ||| |||||||| |
|
|
| T |
15216927 |
tgttatttattcaaaccagataaggactcgattgtcgaatatgcttttggtattagtatgcaaggactatgctggagaagttgttgatagaaaactgatt |
15216828 |
T |
 |
| Q |
101 |
agaaatgttacaaagatgctgatggatttaggtccttctgtttatgagcaagtatttgagactccttttctgcaagttttagctga |
186 |
Q |
| |
|
||| || | ||||| ||||| ||||||||||||||||| |||||| ||||| |||||||| |||||| |||||||||| |||||| |
|
|
| T |
15216827 |
agatatataacaaatatgctaatggatttaggtccttccgtttatatgcaagaatttgagaatcctttgctgcaagtttcagctga |
15216742 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1961 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold1961
Description:
Target: scaffold1961; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 207 - 22
Alignment:
| Q |
1 |
tgttatttattcaaaccagataaggactcaactgtcgaatacgcttttggagtttgtattcaaggagcgtgccggggaagatgttaacagagaactgatt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||| | | | ||||| |||||||| || ||| |||||| ||| | ||||| ||||| | | |||||||| |
|
|
| T |
207 |
tgttatttattcaaaccagataaggactcgatttttgaatatgcttttgggattaatatgcaaggactatgctgaggaagtcgttaataaaaaactgatt |
108 |
T |
 |
| Q |
101 |
agaaatgttacaaagatgctgatggatttaggtccttctgtttatgagcaagtatttgagactccttttctgcaagttttagctga |
186 |
Q |
| |
|
||||| | || || ||||| ||||||||||||||||| |||||| ||||| |||||||| |||||| |||||||||| |||||| |
|
|
| T |
107 |
agaaaaataacgaatatgctaatggatttaggtccttccgtttatatgcaagaatttgagaatcctttgctgcaagtttcagctga |
22 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 186
Target Start/End: Complemental strand, 24395732 - 24395647
Alignment:
| Q |
101 |
agaaatgttacaaagatgctgatggatttaggtccttctgtttatgagcaagtatttgagactccttttctgcaagttttagctga |
186 |
Q |
| |
|
|||||| | ||||| ||||| |||||||||||||| ||||||||| |||| |||||| ||| |||||| ||||||| |||||| |
|
|
| T |
24395732 |
agaaatataacaaaaatgctaatggatttaggtccagctgtttatggtcaagattttgaggctcattttcttcaagtttcagctga |
24395647 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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