View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21086_low_23 (Length: 214)
Name: NF21086_low_23
Description: NF21086
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21086_low_23 |
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Alignment Details
Target: chr1 (Bit Score: 169; Significance: 8e-91; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 169; E-Value: 8e-91
Query Start/End: Original strand, 19 - 195
Target Start/End: Complemental strand, 50463573 - 50463397
Alignment:
| Q |
19 |
ggagacattggtacgaggagttaagtcggagagattgtttttcgaagcagaagacacgagttcgatcttagaaaaggcgaaggcgaatggttttccattc |
118 |
Q |
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| T |
50463573 |
ggagacattggtacgaggagttaagtcggagagattgtttttcgaagcagaagacacgagttcgatcttagaaaaggcgaaggctaatggttttccattc |
50463474 |
T |
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| Q |
119 |
aaagaaagtgttgtgttagctatggagtcagaggatccatatgaagattttaagagatcaatggaagagatggttga |
195 |
Q |
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| T |
50463473 |
aaagaaagtgttgtgttagctatggagtcagaggatccatatgaagattttaagagatcaatggaagagattgttga |
50463397 |
T |
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