View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21087_high_48 (Length: 253)

Name: NF21087_high_48
Description: NF21087
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21087_high_48
NF21087_high_48
[»] chr7 (27 HSPs)
chr7 (59-226)||(20565729-20565896)
chr7 (59-226)||(9366189-9366356)
chr7 (59-226)||(17840289-17840456)
chr7 (59-226)||(42504327-42504494)
chr7 (59-226)||(34157770-34157934)
chr7 (63-226)||(48271745-48271908)
chr7 (59-226)||(42683493-42683663)
chr7 (59-226)||(46861147-46861314)
chr7 (59-226)||(34141941-34142108)
chr7 (59-222)||(41623171-41623334)
chr7 (67-226)||(28978185-28978344)
chr7 (59-225)||(21186247-21186413)
chr7 (59-223)||(36392776-36392940)
chr7 (82-226)||(45362245-45362389)
chr7 (82-226)||(48194078-48194222)
chr7 (60-222)||(10225161-10225323)
chr7 (82-226)||(40589850-40589994)
chr7 (120-225)||(28113359-28113464)
chr7 (59-220)||(4230560-4230724)
chr7 (59-226)||(1641634-1641804)
chr7 (89-226)||(43350344-43350481)
chr7 (89-226)||(22291966-22292103)
chr7 (89-226)||(42736111-42736247)
chr7 (59-220)||(15900364-15900522)
chr7 (95-195)||(20877007-20877107)
chr7 (163-226)||(17184393-17184456)
chr7 (145-217)||(3380020-3380092)
[»] chr5 (27 HSPs)
chr5 (59-226)||(19035748-19035915)
chr5 (59-225)||(8575215-8575381)
chr5 (59-226)||(6303-6470)
chr5 (59-222)||(11028417-11028580)
chr5 (59-222)||(38855124-38855287)
chr5 (59-226)||(27660450-27660617)
chr5 (60-226)||(8538947-8539113)
chr5 (59-253)||(11347770-11347964)
chr5 (59-226)||(30710569-30710736)
chr5 (59-226)||(3602431-3602597)
chr5 (59-226)||(34682880-34683047)
chr5 (59-226)||(18309349-18309516)
chr5 (59-226)||(25499170-25499337)
chr5 (59-226)||(1399254-1399421)
chr5 (59-222)||(35566360-35566523)
chr5 (81-225)||(20199451-20199595)
chr5 (60-225)||(35927034-35927197)
chr5 (89-220)||(7484451-7484582)
chr5 (98-220)||(1972506-1972628)
chr5 (59-220)||(7400798-7400962)
chr5 (89-226)||(6792399-6792536)
chr5 (145-226)||(4723043-4723124)
chr5 (95-226)||(1695934-1696065)
chr5 (169-222)||(41202357-41202410)
chr5 (95-217)||(36349265-36349386)
chr5 (93-217)||(10978414-10978538)
chr5 (145-188)||(31239181-31239224)
[»] chr6 (23 HSPs)
chr6 (59-226)||(27641146-27641313)
chr6 (59-226)||(6206456-6206623)
chr6 (59-226)||(11693423-11693590)
chr6 (59-253)||(32691634-32691828)
chr6 (59-226)||(13403900-13404067)
chr6 (59-226)||(32026575-32026742)
chr6 (59-226)||(32036634-32036801)
chr6 (59-225)||(13616852-13617018)
chr6 (63-225)||(34802136-34802298)
chr6 (82-226)||(29067587-29067731)
chr6 (82-226)||(29109176-29109320)
chr6 (59-221)||(35020203-35020373)
chr6 (59-226)||(14123794-14123964)
chr6 (60-225)||(20241304-20241472)
chr6 (60-225)||(22135288-22135456)
chr6 (60-225)||(22142641-22142809)
chr6 (89-226)||(12397916-12398052)
chr6 (59-220)||(30763939-30764103)
chr6 (60-217)||(32133629-32133789)
chr6 (59-220)||(33201368-33201532)
chr6 (89-217)||(21863877-21864005)
chr6 (145-188)||(17464487-17464530)
chr6 (145-217)||(14485937-14486008)
[»] chr4 (38 HSPs)
chr4 (59-226)||(41793874-41794041)
chr4 (59-253)||(49095713-49095907)
chr4 (59-226)||(6176387-6176554)
chr4 (59-226)||(21016249-21016416)
chr4 (59-226)||(55797711-55797878)
chr4 (59-226)||(40352848-40353015)
chr4 (59-226)||(34152236-34152403)
chr4 (59-226)||(56139983-56140150)
chr4 (59-225)||(37867540-37867706)
chr4 (59-225)||(6281476-6281642)
chr4 (60-226)||(49422708-49422870)
chr4 (59-226)||(956404-956571)
chr4 (59-226)||(44559277-44559444)
chr4 (82-226)||(34528770-34528914)
chr4 (82-226)||(1043836-1043980)
chr4 (82-226)||(39589872-39590016)
chr4 (59-226)||(51427151-51427319)
chr4 (59-226)||(49572190-49572357)
chr4 (59-222)||(9490555-9490718)
chr4 (59-226)||(21410929-21411099)
chr4 (59-226)||(21412347-21412517)
chr4 (120-218)||(4784301-4784399)
chr4 (59-220)||(25145619-25145783)
chr4 (89-226)||(21170599-21170736)
chr4 (89-226)||(36775435-36775572)
chr4 (120-221)||(42887430-42887531)
chr4 (89-226)||(49790882-49791019)
chr4 (89-226)||(51026741-51026878)
chr4 (59-220)||(9718344-9718507)
chr4 (59-220)||(24076212-24076376)
chr4 (89-226)||(4910586-4910723)
chr4 (145-226)||(45940717-45940798)
chr4 (89-217)||(2774140-2774267)
chr4 (145-225)||(17292843-17292923)
chr4 (95-207)||(49816385-49816497)
chr4 (95-208)||(43888461-43888574)
chr4 (95-220)||(17054376-17054501)
chr4 (181-226)||(47873245-47873290)
[»] chr2 (26 HSPs)
chr2 (59-226)||(17425761-17425928)
chr2 (59-226)||(28476477-28476644)
chr2 (59-226)||(43983697-43983864)
chr2 (60-226)||(3936373-3936539)
chr2 (59-226)||(22002797-22002964)
chr2 (59-222)||(39798941-39799104)
chr2 (59-226)||(16582895-16583062)
chr2 (59-226)||(19470573-19470740)
chr2 (59-222)||(35492618-35492780)
chr2 (59-222)||(41498074-41498237)
chr2 (60-226)||(23408807-23408973)
chr2 (59-226)||(43492545-43492712)
chr2 (59-225)||(2918317-2918483)
chr2 (59-225)||(40676371-40676537)
chr2 (82-226)||(3942495-3942639)
chr2 (89-220)||(6977952-6978083)
chr2 (59-226)||(33404838-33405008)
chr2 (89-226)||(16413226-16413362)
chr2 (89-225)||(15890925-15891060)
chr2 (89-217)||(17537870-17537998)
chr2 (161-225)||(23786740-23786804)
chr2 (68-226)||(5421234-5421395)
chr2 (89-226)||(34520668-34520805)
chr2 (99-226)||(37311593-37311720)
chr2 (145-226)||(24107721-24107802)
chr2 (145-220)||(28272587-28272662)
[»] chr3 (45 HSPs)
chr3 (59-226)||(54391424-54391591)
chr3 (59-226)||(46405987-46406154)
chr3 (59-226)||(49139124-49139291)
chr3 (59-226)||(2645946-2646113)
chr3 (59-226)||(34050709-34050876)
chr3 (59-225)||(2267556-2267722)
chr3 (59-226)||(3494094-3494261)
chr3 (59-226)||(4003224-4003391)
chr3 (63-226)||(36136001-36136163)
chr3 (59-226)||(51694506-51694673)
chr3 (60-226)||(2429568-2429734)
chr3 (59-226)||(43570965-43571132)
chr3 (59-226)||(45099421-45099588)
chr3 (59-222)||(55268035-55268198)
chr3 (61-222)||(34692258-34692419)
chr3 (59-226)||(13894857-13895023)
chr3 (60-226)||(52568391-52568557)
chr3 (59-225)||(41579008-41579174)
chr3 (59-226)||(49217699-49217867)
chr3 (59-218)||(46345565-46345724)
chr3 (59-226)||(7247141-7247309)
chr3 (60-222)||(55205898-55206058)
chr3 (83-226)||(43478134-43478277)
chr3 (127-226)||(3497788-3497887)
chr3 (82-216)||(49611260-49611394)
chr3 (120-226)||(34646173-34646279)
chr3 (89-226)||(11377933-11378070)
chr3 (89-226)||(49274547-49274684)
chr3 (60-226)||(27096642-27096812)
chr3 (89-226)||(34471013-34471150)
chr3 (89-217)||(44928588-44928716)
chr3 (59-226)||(50458202-50458372)
chr3 (59-220)||(51012244-51012408)
chr3 (59-226)||(20374929-20375098)
chr3 (100-226)||(14632606-14632732)
chr3 (163-226)||(10052309-10052372)
chr3 (151-226)||(27188263-27188338)
chr3 (89-226)||(51016416-51016553)
chr3 (59-210)||(50341410-50341564)
chr3 (89-226)||(46413240-46413378)
chr3 (161-226)||(18441574-18441639)
chr3 (161-226)||(19486648-19486713)
chr3 (89-200)||(30193663-30193774)
chr3 (175-226)||(42322360-42322411)
chr3 (63-105)||(24701365-24701407)
[»] chr8 (20 HSPs)
chr8 (59-226)||(484326-484493)
chr8 (59-226)||(15031393-15031560)
chr8 (59-226)||(45065757-45065924)
chr8 (59-226)||(41016922-41017089)
chr8 (59-225)||(28167883-28168049)
chr8 (59-226)||(41276155-41276322)
chr8 (59-226)||(41855950-41856117)
chr8 (59-226)||(24862426-24862593)
chr8 (60-219)||(42604532-42604691)
chr8 (60-221)||(40703442-40703603)
chr8 (59-226)||(18439251-18439418)
chr8 (82-226)||(44051535-44051679)
chr8 (86-226)||(22550173-22550312)
chr8 (125-220)||(26487612-26487707)
chr8 (89-220)||(38032863-38032994)
chr8 (89-226)||(42167889-42168026)
chr8 (174-226)||(38872351-38872403)
chr8 (145-220)||(10205599-10205674)
chr8 (95-201)||(19241635-19241741)
chr8 (95-201)||(19314819-19314925)
[»] chr1 (38 HSPs)
chr1 (59-222)||(13634372-13634535)
chr1 (59-226)||(49428429-49428596)
chr1 (60-226)||(48227602-48227768)
chr1 (59-225)||(35525147-35525312)
chr1 (59-225)||(18974401-18974567)
chr1 (59-225)||(29437024-29437189)
chr1 (60-222)||(49925402-49925564)
chr1 (60-221)||(42570745-42570906)
chr1 (59-226)||(41803316-41803483)
chr1 (59-226)||(27485672-27485838)
chr1 (82-226)||(51270916-51271060)
chr1 (59-225)||(13974016-13974182)
chr1 (59-221)||(26494548-26494710)
chr1 (60-226)||(36910972-36911137)
chr1 (75-225)||(46142405-46142555)
chr1 (59-226)||(24363016-24363183)
chr1 (82-226)||(29761130-29761273)
chr1 (59-214)||(49397736-49397891)
chr1 (120-226)||(44336867-44336973)
chr1 (59-222)||(6436803-6436973)
chr1 (139-226)||(26634157-26634244)
chr1 (139-226)||(14172709-14172796)
chr1 (89-226)||(15355737-15355874)
chr1 (89-226)||(35585855-35585992)
chr1 (89-217)||(23343637-23343765)
chr1 (89-226)||(37779266-37779403)
chr1 (89-226)||(49260632-49260769)
chr1 (89-226)||(38044157-38044294)
chr1 (59-226)||(16531143-16531313)
chr1 (89-226)||(39856196-39856333)
chr1 (89-226)||(17685282-17685419)
chr1 (89-226)||(35186121-35186258)
chr1 (89-220)||(24269327-24269457)
chr1 (62-184)||(13284550-13284675)
chr1 (95-226)||(12790226-12790354)
chr1 (95-208)||(40532348-40532461)
chr1 (89-188)||(14771762-14771861)
chr1 (89-178)||(31451454-31451543)
[»] scaffold0494 (1 HSPs)
scaffold0494 (59-226)||(5794-5961)
[»] scaffold0176 (1 HSPs)
scaffold0176 (59-226)||(2866-3033)
[»] scaffold0618 (1 HSPs)
scaffold0618 (59-218)||(4519-4678)
[»] scaffold0859 (1 HSPs)
scaffold0859 (89-226)||(1456-1593)
[»] scaffold0589 (1 HSPs)
scaffold0589 (89-207)||(5420-5538)
[»] scaffold0258 (1 HSPs)
scaffold0258 (59-186)||(9577-9707)
[»] scaffold0500 (1 HSPs)
scaffold0500 (145-220)||(1571-1646)
[»] scaffold0192 (1 HSPs)
scaffold0192 (59-97)||(17037-17075)


Alignment Details
Target: chr7 (Bit Score: 168; Significance: 4e-90; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 59 - 226
Target Start/End: Original strand, 20565729 - 20565896
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20565729 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 20565828  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20565829 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 20565896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 59 - 226
Target Start/End: Complemental strand, 9366356 - 9366189
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  9366356 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcaatcggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 9366257  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9366256 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 9366189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 59 - 226
Target Start/End: Original strand, 17840289 - 17840456
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || || ||| |||||||||||||||||||||||||||||||||||||||    
T  17840289 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcaatcgggttgcccgctacagtccctgcggtaccttgttttggttgaggac 17840388  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  17840389 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcacattcgaacccttc 17840456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 59 - 226
Target Start/End: Complemental strand, 42504494 - 42504327
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  42504494 caattaggcattaaaagccattactgtcattcttcctcgtcacacaaatcaattggcttgtccgctacagtccctgcggtaccttcttttggttgaggac 42504395  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  42504394 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacactggcaccttcgaacccttc 42504327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 59 - 226
Target Start/End: Original strand, 34157770 - 34157934
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || || ||| ||||||||||||||| |||||||||||||||||||||||    
T  34157770 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcaatcgggttgcccgctacagtccctgtggtaccttgttttggttgaggac 34157869  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    ||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||    
T  34157870 cgaaatagcatgtcctcccg---ctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 34157934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 48271745 - 48271908
Alignment:
Q  63 taggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaa 162  Q
    ||||||||||||||||||||||||||||||||||||||||||| || || || ||| ||||||||||||||| || ||||||||||||||||||||| ||    
T  48271745 taggcattaaaagccattacattcattcttcctcgtcacacaagtcaatcgggttgcccgctacagtccctggggcaccttgttttggttgaggaccaaa 48271844  T
Q  163 atagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48271845 atagcatgtcatcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 48271908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 59 - 226
Target Start/End: Original strand, 42683493 - 42683663
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| || || || ||| ||||||||||||||| || ||||||||||||||||||||    
T  42683493 caattaggcattaaaagccattacattcattcttcctcatcacacaagtcaatcgggttgcccgctacagtccctggggcaccttgttttggttgaggac 42683592  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacac---cggcaccttcgaacccttc 226  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||    
T  42683593 caaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcggcaccttcgaacccttc 42683663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 59 - 226
Target Start/End: Complemental strand, 46861314 - 46861147
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| || || || ||| ||||||||||||||| || ||||||||||||||||||||    
T  46861314 caattaggcattaaaagccattacattcattcttcctcgtcatacaagtcaatcgggttgcccgctacagtccctggggcaccttgttttggttgaggac 46861215  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    | ||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  46861214 caaaatagcatttcctcccactcctcctcaatctcgagtgattgtacaccggcaccttcgaacccttc 46861147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 59 - 226
Target Start/End: Original strand, 34141941 - 34142108
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||| || || || ||  ||||||||||||||| || ||||||||||||||||||||    
T  34141941 caattaggcattaaaagtcattacattcattcctcctcgtcacacaagtcaatcgggtttcccgctacagtccctgtggcaccttgttttggttgaggac 34142040  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    | |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  34142041 caaaatagcatgtcatcccgctcctcctcaacctcgagtgattgtactccggcaccttcgaacccttc 34142108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 59 - 222
Target Start/End: Original strand, 41623171 - 41623334
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| || || || ||| ||||||||||||||| || |||||||||||| |||||||    
T  41623171 caattaggcattaaaagccattacattcattcttcctcatcacacaagtcaatcgggttgcccgctacagtccctggggcaccttgttttggatgaggac 41623270  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacc 222  Q
    | |||||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||    
T  41623271 caaaatagcatgtccttccgctcctcctcaacctcgactgattgtacaccgacaccttcgaacc 41623334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 67 - 226
Target Start/End: Complemental strand, 28978344 - 28978185
Alignment:
Q  67 cattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatag 166  Q
    ||||||||| | ||||||||||||||||||||||||||| || || || ||| ||||||||||||||| ||  ||||||||| |||||||||| |||||     
T  28978344 cattaaaagtctttacattcattcttcctcgtcacacaagtcaatcgggttgcccgctacagtccctgtggcgccttgtttttgttgaggaccaaaataa 28978245  T
Q  167 catgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  28978244 catgtcctcccgctcctcctcaacctcgagtgattgtacaccgggaccttcgaacccttc 28978185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 59 - 225
Target Start/End: Complemental strand, 21186413 - 21186247
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||| || || |  ||| ||||||||||||||  || ||||||||||||||||||||    
T  21186413 caattaggcattaaatgtcattacattcattcttcctcgtcacacaagtcaatcgagttgcccgctacagtccctagggcaccttgttttggttgaggac 21186314  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaaccctt 225  Q
    | ||||| |||||||||||||||||||||||||| || |||||||| ||||||||||||||||||||    
T  21186313 caaaataacatgtcctcccgctcctcctcaacctggattgattgtataccggcaccttcgaaccctt 21186247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 59 - 223
Target Start/End: Complemental strand, 36392940 - 36392776
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    |||||||||||||||||  |||||||| ||||||||||||||||||| || || || ||| ||||||||||||||| || ||||||||||||||||||||    
T  36392940 caattaggcattaaaagaaattacattaattcttcctcgtcacacaagtcaatcgggttgcccgctacagtccctgaggcaccttgttttggttgaggac 36392841  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaaccc 223  Q
    | ||||| |||||||||||||||||||||||||| || ||||||||||  |||||||||||||||    
T  36392840 caaaataacatgtcctcccgctcctcctcaacctggactgattgtacaatggcaccttcgaaccc 36392776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 82 - 226
Target Start/End: Complemental strand, 45362389 - 45362245
Alignment:
Q  82 cattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctc 181  Q
    ||||||||| |||||||||||||| || || || ||  | |||||||||| ||||| ||||| ||||||||||||||| |||||||||||||||||||||    
T  45362389 cattcattcatcctcgtcacacaagtcaatcggatttcctgctacagtccttgcggcaccttcttttggttgaggaccaaaatagcatgtcctcccgctc 45362290  T
Q  182 ctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  45362289 ctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 45362245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 82 - 226
Target Start/End: Original strand, 48194078 - 48194222
Alignment:
Q  82 cattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctc 181  Q
    ||||||||| |||||||||||||| || ||  | ||  |||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  48194078 cattcattcatcctcgtcacacaagtcaatcaggtttcccgctatagtccctgcggcaccttgttttggttgaggaccaaaatagcatgtcctcccgctc 48194177  T
Q  182 ctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    ||||||||||||||||||||||||||| |||||||||||||||||    
T  48194178 ctcctcaacctcgagtgattgtacaccagcaccttcgaacccttc 48194222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 60 - 222
Target Start/End: Original strand, 10225161 - 10225323
Alignment:
Q  60 aattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggacc 159  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||| || || || ||| |||||||| || ||| || ||||||||||||||||| |||    
T  10225161 aattagacattaaaagccattatattcattcttcctcgtcacacaagtcaatcgggttggccgctacaatctctgaggcaccttgttttggttgagaacc 10225260  T
Q  160 gaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacc 222  Q
     ||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  10225261 aaaatagcatttccccccgctcctcctcaacctcgactgattgtacaccggcaccttcaaacc 10225323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 82 - 226
Target Start/End: Original strand, 40589850 - 40589994
Alignment:
Q  82 cattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctc 181  Q
    ||||||||| |||||||||||||| || || || ||  | ||||| |||||||||| |||||||||||||||| |||| |||||||||||||||||||||    
T  40589850 cattcattcatcctcgtcacacaagtcaatcgggtttcctgctacggtccctgcggcaccttgttttggttgatgaccaaaatagcatgtcctcccgctc 40589949  T
Q  182 ctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    ||||||||||||||||||||||||||||||| |||||||||||||    
T  40589950 ctcctcaacctcgagtgattgtacaccggcatcttcgaacccttc 40589994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 120 - 225
Target Start/End: Complemental strand, 28113464 - 28113359
Alignment:
Q  120 ccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcga 219  Q
    ||||||||||||||| || ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| |    
T  28113464 ccgctacagtccctgtggcaccttgttttggttgaggaccaaaataacatgtcctcccgctcctcctcaacctcgactgattgtacaccggcaccttcaa 28113365  T
Q  220 accctt 225  Q
    ||||||    
T  28113364 accctt 28113359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 59 - 220
Target Start/End: Original strand, 4230560 - 4230724
Alignment:
Q  59 caattaggcattaaaagccattacattcattc---ttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgag 155  Q
    ||||||| ||||| ||||||||||| ||| ||   ||||||||||||||| || ||||| |||||| | |||||||||| || ||||  |||||||||||    
T  4230560 caattagacattacaagccattacaatcaatcatcttcctcgtcacacaagtcaattgggttgtcctcgacagtccctggggcacctgcttttggttgag 4230659  T
Q  156 gaccgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaa 220  Q
    || | ||||||||||||||||||||||||||| |||| || ||||||||||||||||||||||||    
T  4230660 gatcaaaatagcatgtcctcccgctcctcctccacctggaatgattgtacaccggcaccttcgaa 4230724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 59 - 226
Target Start/End: Complemental strand, 1641804 - 1641634
Alignment:
Q  59 caattaggcattaaaagccattacattcattc---ttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgag 155  Q
    ||||||||||||| || |||||||||||| ||   ||||||||||||||| || | ||| |||||| |  |||| |||| || ||||| |||||||||||    
T  1641804 caattaggcattacaatccattacattcaatcatcttcctcgtcacacaagtcaactggattgtcctcgccagttcctggggcaccttcttttggttgag 1641705  T
Q  156 gaccgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    |||| ||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||| || |||||    
T  1641704 gaccaaaataacatgtcctcccgctcctcctcaacctcgtttgattgtacaccggcaccttcaaatccttc 1641634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 89 - 226
Target Start/End: Complemental strand, 43350481 - 43350344
Alignment:
Q  89 tcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctca 188  Q
    |||||||| |||||||| || ||||| |||||| | |||||||||| || ||||  |||||||||| |||| ||||||||||||||||||||||||||||    
T  43350481 tcttcctcatcacacaagtcaattgggttgtcctcgacagtccctggggcacctgcttttggttgaagaccaaaatagcatgtcctcccgctcctcctca 43350382  T
Q  189 acctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    ||||| | ||||| |||||| |||| |||||| |||||    
T  43350381 acctcaaatgattatacaccagcacattcgaatccttc 43350344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 89 - 226
Target Start/End: Original strand, 22291966 - 22292103
Alignment:
Q  89 tcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctca 188  Q
    |||||||| |||||||| || ||| | |||||| | |||||||||| || ||||  |||||| | |||||| ||||||||||||||||||||||||||||    
T  22291966 tcttcctcatcacacaagtcaattaggttgtcctcgacagtccctggggcacctgcttttggctcaggaccaaaatagcatgtcctcccgctcctcctca 22292065  T
Q  189 acctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    ||||||| ||||| |||||| ||||||| ||| |||||    
T  22292066 acctcgaatgattatacaccagcacctttgaatccttc 22292103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 89 - 226
Target Start/End: Original strand, 42736111 - 42736247
Alignment:
Q  89 tcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctca 188  Q
    |||||||| |||||||| || ||||| |||||| | |||||||||| || ||||  |||||| |||||||| ||||||||||| ||||||||||||||||    
T  42736111 tcttcctcatcacacaagtcaattgggttgtcctcgacagtccctg-ggcacctgcttttggctgaggaccaaaatagcatgttctcccgctcctcctca 42736209  T
Q  189 acctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    ||||||| ||||| |||||| ||| |||| || |||||    
T  42736210 acctcgaatgattatacaccagcatcttcaaatccttc 42736247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 59 - 220
Target Start/End: Complemental strand, 15900522 - 15900364
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    ||||||||||||| |||||| |||||    ||||||||||||||||  |  || || |||||| | |||||||||| || ||||  |||||  |||||||    
T  15900522 caattaggcattacaagccactacata---tcttcctcgtcacacaggttaatcgggttgtcctcgacagtccctggggcacctgcttttgactgaggac 15900426  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaa 220  Q
    | ||||||||| ||||||| |||||||||| |||||| |||||||||||| |||||||||||    
T  15900425 caaaatagcatatcctcccactcctcctcagcctcgactgattgtacaccagcaccttcgaa 15900364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 95 - 195
Target Start/End: Complemental strand, 20877107 - 20877007
Alignment:
Q  95 tcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctcaacctcg 194  Q
    ||||||||||| || || || |||||| | |||||||||| || ||||  ||||||||||||||| |||||||||||||||||||||||||| |||||||    
T  20877107 tcgtcacacaattcaatcgggttgtcctcgacagtccctggggcacctgcttttggttgaggaccaaaatagcatgtcctcccgctcctcctaaacctcg 20877008  T
Q  195 a 195  Q
    |    
T  20877007 a 20877007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 163 - 226
Target Start/End: Original strand, 17184393 - 17184456
Alignment:
Q  163 atagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||| ||||||||||| |||||    
T  17184393 atagcatgtcctcccgctcctcctcaacctcgaatgattatacaccagcaccttcgaatccttc 17184456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 145 - 217
Target Start/End: Complemental strand, 3380092 - 3380020
Alignment:
Q  145 ttttggttgaggaccgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttc 217  Q
    ||||||||||||||| ||||||||||||||||||||||||||||  || || | ||| |||| ||||||||||    
T  3380092 ttttggttgaggaccaaaatagcatgtcctcccgctcctcctcagtctggactaattatacatcggcaccttc 3380020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 168; Significance: 4e-90; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 59 - 226
Target Start/End: Complemental strand, 19035915 - 19035748
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19035915 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 19035816  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19035815 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 19035748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 59 - 225
Target Start/End: Complemental strand, 8575381 - 8575215
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||||||||||||||||||||||||||||    
T  8575381 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcaatcggcttgtccgctatagtccctgcggtaccttgttttggttgaggac 8575282  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaaccctt 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  8575281 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacactggcaccttcgaaccctt 8575215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 59 - 226
Target Start/End: Complemental strand, 6470 - 6303
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| || |||||  |||||||||||||||||||||||||||||||||||||||    
T  6470 caattaggcataaaaagccattacattcattcttcctcgtcacacaaatcaataggcttaaccgctacagtccctgcggtaccttgttttggttgaggac 6371  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6370 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 6303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 59 - 222
Target Start/End: Original strand, 11028417 - 11028580
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  11028417 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcaatcggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 11028516  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacc 222  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  11028517 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacactggcaccttcaaacc 11028580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 59 - 222
Target Start/End: Original strand, 38855124 - 38855287
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  38855124 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcaatcggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 38855223  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacc 222  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  38855224 cgaaataacatgtcctcccgctcctcctcaacctcgagtgattgtacactggcaccttcgaacc 38855287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 59 - 226
Target Start/End: Complemental strand, 27660617 - 27660450
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||||||| || |||||||||| |||||||||||||||||||||||||||||||||||    
T  27660617 caattaggcattaaaagtcattacattcattctttctcgtcacacaaatcaatcggcttgtccgatacagtccctgcggtaccttgttttggttgaggac 27660518  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  27660517 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacactggcaccttcgaacccttc 27660450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 60 - 226
Target Start/End: Original strand, 8538947 - 8539113
Alignment:
Q  60 aattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggacc 159  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || || ||| |||||||||||||| |||||||||||||||||||||||||    
T  8538947 aattaggcattaaaagccattacattcattcttcctcgtcacacaaatcaatcgggttgcccgctacagtccctacggtaccttgttttggttgaggacc 8539046  T
Q  160 gaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  8539047 gaaatagcatgtcctcctgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 8539113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 59 - 253
Target Start/End: Original strand, 11347770 - 11347964
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    ||||||||||||||||| |||| ||||||||||||||||| ||||||||| || || ||| |||||||||||||||||||||||||||||||||||||||    
T  11347770 caattaggcattaaaagtcattgcattcattcttcctcgtaacacaaatcaatcgggttgcccgctacagtccctgcggtaccttgttttggttgaggac 11347869  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttcnnnnnnnncggaaccatcgcaaacaat 253  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||    
T  11347870 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttcttttttttcggaaccatcgcaaacaat 11347964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 59 - 226
Target Start/End: Original strand, 30710569 - 30710736
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  30710569 caattaggcattaaaagtcattacatttattcttcctcgtcacacaaatcaattggcttgtccgctacagtccctgcagtaccttgttttggtcgaggac 30710668  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  30710669 cgaaataacatgtcctctcgctcctcctcaacctcgagtgattgtacactggcaccttcgaacccttc 30710736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 59 - 226
Target Start/End: Original strand, 3602431 - 3602597
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || || || ||||||||||||||||||| || ||||||||||||||||||||    
T  3602431 caattaggcattaaaagccattacattcattcttcctcgtcacacaagtcaatcggattgtccgctacagtccctg-ggcaccttgttttggttgaggac 3602529  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    | |||||||||||||||||||||||||||||||| || ||||||||||||| ||||||||||||||||    
T  3602530 caaaatagcatgtcctcccgctcctcctcaacctggactgattgtacaccgccaccttcgaacccttc 3602597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 59 - 226
Target Start/End: Complemental strand, 34683047 - 34682880
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || || |  ||| ||||||||||||||| || ||||||||||||||||||||    
T  34683047 caattaggcattaaaagccattacattcattcttcctcgtcacacaagtcaatcgagttgcccgctacagtccctggggaaccttgttttggttgaggac 34682948  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    | ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  34682947 caaaatagcatgtcctcccgctcctcctcaacctcgactgattgtacaccgtcaccttcgaacccttc 34682880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 59 - 226
Target Start/End: Original strand, 18309349 - 18309516
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  | || || ||| ||||||||||||||  || ||||||||||||||||||||    
T  18309349 caattaggcattaaaagccattacattcattcttcctcgtcacacaatgcaatcgggttgcccgctacagtcccttgggcaccttgttttggttgaggac 18309448  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    | |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  18309449 caaaatagcatgtcctcccgctcctcctcaacctggactgattgtacaccggcaccttcgaacccttc 18309516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 59 - 226
Target Start/End: Original strand, 25499170 - 25499337
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| || || || ||| |||||||||||| || || ||||||||||||||||||||    
T  25499170 caattaggcattaaaagccattacattcattcatcctcgtcacacaagtcaatcgggttgcccgctacagtccttggggcaccttgttttggttgaggac 25499269  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    | |||||| |||||||||||||||||||| |||| || ||||||||||||||||||||||||||||||    
T  25499270 caaaatagtatgtcctcccgctcctcctccacctggactgattgtacaccggcaccttcgaacccttc 25499337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 59 - 226
Target Start/End: Complemental strand, 1399421 - 1399254
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || |  || |||| ||||||| |||||| || ||||||||||| |||||||     
T  1399421 caattaggcattaaaagccattacattcattcttcctcgtcacacaagtcaaccgggttgttcgctacaatccctggggcaccttgttttgattgaggat 1399322  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    | |||||||||||||||||||||||||||||||| || | |||||||||||||||||| |||||||||    
T  1399321 caaaatagcatgtcctcccgctcctcctcaacctagactaattgtacaccggcacctttgaacccttc 1399254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 59 - 222
Target Start/End: Original strand, 35566360 - 35566523
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||| || || || ||| ||||||||||||||| || ||||||||||||||||||||    
T  35566360 caattaggcattaagagccattacattcaatcttcctcgtcacacaagtcaatcgggttggccgctacagtccctgaggcaccttgttttggttgaggac 35566459  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacc 222  Q
    | ||||||||||||||| |||||| |||||||||||| || |||||||| ||||||||||||||    
T  35566460 caaaatagcatgtcctcacgctccgcctcaacctcgactggttgtacactggcaccttcgaacc 35566523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 81 - 225
Target Start/End: Original strand, 20199451 - 20199595
Alignment:
Q  81 acattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgct 180  Q
    ||||||||||||||||||||||||| || || || ||| ||||||||||||||| || || |||||||||||||||||| ||||||||||||||||||||    
T  20199451 acattcattcttcctcgtcacacaagtcaatcgggttgcccgctacagtccctggggcactttgttttggttgaggaccaaaatagcatgtcctcccgct 20199550  T
Q  181 cctcctcaacctcgagtgattgtacaccggcaccttcgaaccctt 225  Q
    |||||||||||| || ||||||||||||| |||||||||| ||||    
T  20199551 cctcctcaacctggactgattgtacaccgacaccttcgaatcctt 20199595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 60 - 225
Target Start/End: Complemental strand, 35927197 - 35927034
Alignment:
Q  60 aattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggacc 159  Q
    |||||||||||  ||||||||||||||||||||||| |||||||||  | || || ||  ||||||  ||||||| || ||||| |||||||||||||||    
T  35927197 aattaggcattggaagccattacattcattcttcctggtcacacaagccaatcgggtttcccgcta--gtccctggggcaccttcttttggttgaggacc 35927100  T
Q  160 gaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaaccctt 225  Q
     ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  35927099 aaaatagcatgtcctcccgctcctcctcaacctcgactgattgtacatcggcaccttcgaaccctt 35927034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 89 - 220
Target Start/End: Complemental strand, 7484582 - 7484451
Alignment:
Q  89 tcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctca 188  Q
    |||||||| |||||||| || ||||| || ||| | |||||||||| || ||||  |||||| |||||||| ||||||||||||||||||||||||||||    
T  7484582 tcttcctcatcacacaagtcaattgggttatcctcgacagtccctggggcacctgcttttggctgaggaccaaaatagcatgtcctcccgctcctcctca 7484483  T
Q  189 acctcgagtgattgtacaccggcaccttcgaa 220  Q
    ||||||| ||||| |||||| |||||||||||    
T  7484482 acctcgaatgattatacaccagcaccttcgaa 7484451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 98 - 220
Target Start/End: Original strand, 1972506 - 1972628
Alignment:
Q  98 tcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctcaacctcgagt 197  Q
    |||||||| || ||||| |||||| | |||||||||| || ||||  ||||| ||||||||| ||||||||||||||||||||||||||||||||||| |    
T  1972506 tcacacaagtcaattggtttgtcctcgacagtccctggggcacctgcttttgcttgaggaccaaaatagcatgtcctcccgctcctcctcaacctcgaat 1972605  T
Q  198 gattgtacaccggcaccttcgaa 220  Q
    |||| |||||| |||||||||||    
T  1972606 gattatacaccagcaccttcgaa 1972628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 59 - 220
Target Start/End: Original strand, 7400798 - 7400962
Alignment:
Q  59 caattaggcattaaaagccattacattcattc---ttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgag 155  Q
    ||||||| ||||| ||||||||| ||||| ||   ||||||||||||||| || ||||| |||||| | ||||||| || || ||||  |||||||||||    
T  7400798 caattagacattacaagccattatattcaatcatcttcctcgtcacacaagtcaattgggttgtcctcgacagtccttgaggcacctgattttggttgag 7400897  T
Q  156 gaccgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaa 220  Q
    |||||||||| |||||||| ||||||||||||| ||| || || ||||| |||||||| ||||||    
T  7400898 gaccgaaataacatgtccttccgctcctcctcagcctggaatggttgtaaaccggcactttcgaa 7400962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 89 - 226
Target Start/End: Complemental strand, 6792536 - 6792399
Alignment:
Q  89 tcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctca 188  Q
    |||| ||| |||||||| || ||||| |||||| | |||||||||  || | ||  |||||| |||||||| ||||||||||||||||||||||||||||    
T  6792536 tcttgctcatcacacaagtcaattgggttgtcctcgacagtccctagggcatctgcttttggctgaggaccaaaatagcatgtcctcccgctcctcctca 6792437  T
Q  189 acctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    ||||||| ||||| |||||| ||||||||||| |||||    
T  6792436 acctcgaatgattatacaccagcaccttcgaatccttc 6792399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 145 - 226
Target Start/End: Complemental strand, 4723124 - 4723043
Alignment:
Q  145 ttttggttgaggaccgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||| ||| |||||    
T  4723124 ttttggctgaggaccaaaatagcatgtcctcccgctcctcctcaacctcgaatgattatacaccagcacctttgaatccttc 4723043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 95 - 226
Target Start/End: Original strand, 1695934 - 1696065
Alignment:
Q  95 tcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctcaacctcg 194  Q
    ||||||||||| || || || |||||| | ||||||| || || ||||  |||||| ||||| || ||||||||||||||||||||||||||||||||||    
T  1695934 tcgtcacacaagtcaatcgggttgtcctcgacagtccttggggcacctgcttttggctgagggccaaaatagcatgtcctcccgctcctcctcaacctcg 1696033  T
Q  195 agtgattgtacaccggcaccttcgaacccttc 226  Q
    | | ||| ||||||  |||||||||| |||||    
T  1696034 aatcattatacaccaacaccttcgaatccttc 1696065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 169 - 222
Target Start/End: Complemental strand, 41202410 - 41202357
Alignment:
Q  169 tgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacc 222  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  41202410 tgtcctcccactcctcctcaacctcaagtgattgtacaccggcaccttcgaacc 41202357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 217
Target Start/End: Complemental strand, 36349386 - 36349265
Alignment:
Q  95 tcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctcaacctcg 194  Q
    |||||||| || || || || |||||| | ||||||||||  | ||||  |||||| |||||||| ||| ||||||||||||||||| ||||||||||||    
T  36349386 tcgtcacataagtcaatcgggttgtcctcgacagtccctggagcacctgcttttggctgaggaccaaaa-agcatgtcctcccgctcttcctcaacctcg 36349288  T
Q  195 agtgattgtacaccggcaccttc 217  Q
    | ||||| |||||| ||||||||    
T  36349287 aatgattatacaccagcaccttc 36349265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 93 - 217
Target Start/End: Original strand, 10978414 - 10978538
Alignment:
Q  93 cctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctcaacct 192  Q
    |||||||||| || || ||||| |||||| |  |||| |||| || ||||  ||||||||||||||| ||||| || ||||| ||||||||||||| | |    
T  10978414 cctcgtcacaaaattcaattgggttgtcctcgtcagttcctggggaacctgcttttggttgaggaccaaaataacaagtccttccgctcctcctcatcat 10978513  T
Q  193 cgagtgattgtacaccggcaccttc 217  Q
      | |||||||||||||||||||||    
T  10978514 gtaatgattgtacaccggcaccttc 10978538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 188
Target Start/End: Original strand, 31239181 - 31239224
Alignment:
Q  145 ttttggttgaggaccgaaatagcatgtcctcccgctcctcctca 188  Q
    ||||||||||||||| |||||||||||||| || ||||||||||    
T  31239181 ttttggttgaggaccaaaatagcatgtccttccactcctcctca 31239224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 164; Significance: 9e-88; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 59 - 226
Target Start/End: Original strand, 27641146 - 27641313
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  27641146 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcaattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 27641245  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27641246 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 27641313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 59 - 226
Target Start/End: Original strand, 6206456 - 6206623
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  6206456 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcaatcggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 6206555  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6206556 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 6206623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 59 - 226
Target Start/End: Original strand, 11693423 - 11693590
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  11693423 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcaatcggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 11693522  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11693523 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 11693590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 59 - 253
Target Start/End: Complemental strand, 32691828 - 32691634
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  32691828 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcaatcggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 32691729  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttcnnnnnnnncggaaccatcgcaaacaat 253  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||||| | ||||||||||||||||        |||||||||||||||||||    
T  32691728 cgaaatagcatgtcctcccgctcctcctcaacctcaagtaattgtacactgacaccttcgaacccttcttttttttcggaaccatcgcaaacaat 32691634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 59 - 226
Target Start/End: Original strand, 13403900 - 13404067
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| || || || ||| ||||||||||||||| || ||||| ||||||||||||||    
T  13403900 caattaggcattaaaagccattacattcattcttcctcttcacacaagtctatcgggttgcccgctacagtccctggggcacctttttttggttgaggac 13403999  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  13404000 cgaaatagcatgtcctctcgctcctcctcaacctcgactgattgtacatcggcaccttcgaacccttc 13404067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 59 - 226
Target Start/End: Complemental strand, 32026742 - 32026575
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||| || || || ||| ||||||||||||||| || ||||||||||||||||||||    
T  32026742 caattaggcattaaaagtcattacattcattcttcctcatcacacaagtcaatcgggttgcccgctacagtccctggggcaccttgttttggttgaggac 32026643  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    | ||||||||||||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  32026642 caaaatagcatgtccacccgctcctcctcaacctcgactaattgtacaccggcaccttcgaacccttc 32026575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 59 - 226
Target Start/End: Complemental strand, 32036801 - 32036634
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||| || || || ||| ||||||||||||||| || ||||||||||||||||||||    
T  32036801 caattaggcattaaaagtcattacattcattcttcctcatcacacaagtcaatcgggttgcccgctacagtccctggggcaccttgttttggttgaggac 32036702  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    | ||||||||||||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  32036701 caaaatagcatgtccacccgctcctcctcaacctcgactaattgtacaccggcaccttcgaacccttc 32036634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 59 - 225
Target Start/End: Complemental strand, 13617018 - 13616852
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||| || || || |||  |||||||||||||| || ||||||||||||||||||||    
T  13617018 caattaggcattgaaagccattacattcattcttccttgtcacacaagtcaatcgggttgctcgctacagtccctggggcaccttgttttggttgaggac 13616919  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaaccctt 225  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  13616918 caaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccgacacctacgaaccctt 13616852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 63 - 225
Target Start/End: Complemental strand, 34802298 - 34802136
Alignment:
Q  63 taggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaa 162  Q
    ||||||||||||| ||||||||||||||||||||||||||||| || |  || ||| | ||||||||||||| || ||||||||||||||||||||  ||    
T  34802298 taggcattaaaagtcattacattcattcttcctcgtcacacaagtcaaccgggttgcctgctacagtccctggggcaccttgttttggttgaggacaaaa 34802199  T
Q  163 atagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaaccctt 225  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  34802198 atagcatgtcctcccgctcctcctcaacctcgactgattgtacaccggcacctttgaaccctt 34802136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 82 - 226
Target Start/End: Original strand, 29067587 - 29067731
Alignment:
Q  82 cattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctc 181  Q
    ||||||||| |||| ||||||||| || || || || |||||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  29067587 cattcattcatccttgtcacacaagtcaatcgggttttccgctacagcccctgcggcaccttgttttggttgaggaccaaaatagcatgtcctcccgctc 29067686  T
Q  182 ctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
     |||||||||||||||||||||||||||  |||||||||||||||    
T  29067687 atcctcaacctcgagtgattgtacaccgaaaccttcgaacccttc 29067731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 82 - 226
Target Start/End: Original strand, 29109176 - 29109320
Alignment:
Q  82 cattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctc 181  Q
    ||||||||| |||| ||||||||| || || || || |||||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  29109176 cattcattcatccttgtcacacaagtcaatcgggttttccgctacagcccctgcggcaccttgttttggttgaggaccaaaatagcatgtcctcccgctc 29109275  T
Q  182 ctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
     |||||||||||||||||||||||||||  |||||||||||||||    
T  29109276 atcctcaacctcgagtgattgtacaccgaaaccttcgaacccttc 29109320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 59 - 221
Target Start/End: Complemental strand, 35020373 - 35020203
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| || || || ||| || |||||||||||  || ||||||||||||||||||||    
T  35020373 caattaggcattaaaaaccattacattcattcttcctcgtcacacaagtcaatcgggttg-ccactacagtccctagggcaccttgttttggttgaggac 35020275  T
Q  159 cgaaatagcatgtcctcccgctc---------ctcctcaacctcgagtgattgtacaccggcaccttcgaac 221  Q
    ||||||| |||||||||||||||         |||||||||||||||||||| |||||||| ||| ||||||    
T  35020274 cgaaataacatgtcctcccgctcctcccgctcctcctcaacctcgagtgattttacaccggaaccgtcgaac 35020203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 59 - 226
Target Start/End: Original strand, 14123794 - 14123964
Alignment:
Q  59 caattaggcattaaaagccattacattcattc---ttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgag 155  Q
    ||||||||||||| ||| ||||||||||||||   ||| ||||||||||| || || || ||| |||||||||||||||||| ||||  ||||| || ||    
T  14123794 caattaggcattacaagtcattacattcattcatcttcatcgtcacacaagtcaatcgggttgcccgctacagtccctgcggcacctacttttgattaag 14123893  T
Q  156 gaccgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    |||| || |||||||||||||| |||||||| |||||||| |||||||||| | ||||||||||| |||||    
T  14123894 gaccaaagtagcatgtcctcccactcctccttaacctcgactgattgtacatcagcaccttcgaatccttc 14123964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 60 - 225
Target Start/End: Complemental strand, 20241472 - 20241304
Alignment:
Q  60 aattaggcattaaaagccattacattcattc---ttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgagg 156  Q
    |||||| ||||| ||||||||||||||| ||   ||||||||||||||| || ||||| |||||| | |||||||||  || ||||  ||||||||||||    
T  20241472 aattagacattacaagccattacattcaatcatcttcctcgtcacacaagtcaattgggttgtcctcaacagtcccttgggaacctgcttttggttgagg 20241373  T
Q  157 accgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaaccctt 225  Q
    ||| |||||||||  ||||| |||||||||||| || ||  |||| |||||||||||||||||| ||||    
T  20241372 accaaaatagcataacctcctgctcctcctcaaactggaacgattatacaccggcaccttcgaatcctt 20241304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 60 - 225
Target Start/End: Complemental strand, 22135456 - 22135288
Alignment:
Q  60 aattaggcattaaaagccattacattcattc---ttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgagg 156  Q
    |||||| ||||| ||||||||||||||| ||   ||||||||||||||| || ||||| |||||| | |||||||||  || ||||  ||||||||||||    
T  22135456 aattagacattacaagccattacattcaatcatcttcctcgtcacacaagtcaattgggttgtcctcaacagtcccttgggaacctgcttttggttgagg 22135357  T
Q  157 accgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaaccctt 225  Q
    ||| |||||||||  ||||| |||||||||||| || ||  |||| |||||||||||||||||| ||||    
T  22135356 accaaaatagcataacctcctgctcctcctcaaactggaacgattatacaccggcaccttcgaatcctt 22135288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 60 - 225
Target Start/End: Complemental strand, 22142809 - 22142641
Alignment:
Q  60 aattaggcattaaaagccattacattcattc---ttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgagg 156  Q
    |||||| ||||| ||||||||||||||| ||   ||||||||||||||| || ||||| |||||| | |||||||||  || ||||  ||||||||||||    
T  22142809 aattagacattacaagccattacattcaatcatcttcctcgtcacacaagtcaattgggttgtcctcaacagtcccttgggaacctgcttttggttgagg 22142710  T
Q  157 accgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaaccctt 225  Q
    ||| |||||||||  ||||| |||||||||||| || ||  |||| |||||||||||||||||| ||||    
T  22142709 accaaaatagcataacctcctgctcctcctcaaactggaacgattatacaccggcaccttcgaatcctt 22142641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 89 - 226
Target Start/End: Original strand, 12397916 - 12398052
Alignment:
Q  89 tcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctca 188  Q
    |||||||| |||||||| || ||||| |||||| | |||||||||| || ||||  |||||| |||||||| ||||| ||||||||||||||||||||||    
T  12397916 tcttcctcatcacacaagtcaattgggttgtcctcgacagtccctg-ggcacctgcttttggctgaggaccaaaatatcatgtcctcccgctcctcctca 12398014  T
Q  189 acctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    ||||||| ||||| ||||||  |||||||||| |||||    
T  12398015 acctcgaatgattatacaccaacaccttcgaatccttc 12398052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 59 - 220
Target Start/End: Complemental strand, 30764103 - 30763939
Alignment:
Q  59 caattaggcattaaaagccattacattcattc---ttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgag 155  Q
    ||||||| ||||| ||||||||||||||| ||   ||||||||||||||| || ||||| |||||| | ||||||| || || ||    |||||||||||    
T  30764103 caattagacattacaagccattacattcaatcattttcctcgtcacacaagtcaattgggttgtcctcgacagtccatggggcactcgcttttggttgag 30764004  T
Q  156 gaccgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaa 220  Q
    |||||||||| |||||| | ||||||||||||| ||| || || ||||| |||||||| ||||||    
T  30764003 gaccgaaataacatgtcattccgctcctcctcagcctggaatggttgtaaaccggcactttcgaa 30763939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 60 - 217
Target Start/End: Complemental strand, 32133789 - 32133629
Alignment:
Q  60 aattaggcattaaaagccattacattcattc---ttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgagg 156  Q
    ||||| |||||| ||| ||||||||||||||   ||||||||||||||  || ||  | |||||  | |||||||||| || ||||  |||||| |||||    
T  32133789 aattacgcattagaagtcattacattcattcatcttcctcgtcacacaggtcaatcaggttgtcatcgacagtccctggggaacctgcttttggctgagg 32133690  T
Q  157 accgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttc 217  Q
    ||| ||||||||||||||| | |||||| ||| |||||| |||||| ||||| ||||||||    
T  32133689 accaaaatagcatgtcctctcactcctcttcagcctcgactgattgcacaccagcaccttc 32133629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 59 - 220
Target Start/End: Original strand, 33201368 - 33201532
Alignment:
Q  59 caattaggcattaaaagccattacattcattc---ttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgag 155  Q
    ||||||| ||||| ||| ||||||||||| ||   ||||||||||||||| || ||| | |||||| | ||| ||||||  | ||||  |||||||||||    
T  33201368 caattagacattacaagtcattacattcaatcatcttcctcgtcacacaagtcaattaggttgtcctcgacattccctggcgcacctgattttggttgag 33201467  T
Q  156 gaccgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaa 220  Q
    |||||| ||| |||||||| |||||| |||||| ||| || || || ||||||||||| ||||||    
T  33201468 gaccgatataacatgtccttccgctcttcctcagcctggaatggttatacaccggcacattcgaa 33201532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 217
Target Start/End: Complemental strand, 21864005 - 21863877
Alignment:
Q  89 tcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctca 188  Q
    |||||||||||||| || || ||||| |||||| | |||||| ||| || || |  ||||| | ||||||| || || |||||||| ||||| |||||||    
T  21864005 tcttcctcgtcacataagtcaattgggttgtcctcgacagtctctggggcacatgcttttgatcgaggaccaaagtaacatgtccttccgcttctcctca 21863906  T
Q  189 acctcgagtgattgtacaccggcaccttc 217  Q
    || | || |||||||||| ||||||||||    
T  21863905 acttggaatgattgtacatcggcaccttc 21863877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 188
Target Start/End: Complemental strand, 17464530 - 17464487
Alignment:
Q  145 ttttggttgaggaccgaaatagcatgtcctcccgctcctcctca 188  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||    
T  17464530 ttttggttgaggaccaaaataacatgtcctcccgctcctcctca 17464487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 217
Target Start/End: Complemental strand, 14486008 - 14485937
Alignment:
Q  145 ttttggttgaggaccgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttc 217  Q
    ||||||||||| ||| ||||| || ||||||  ||||||||||||||| || ||||||||||| |||||||||    
T  14486008 ttttggttgagaaccaaaataacaagtcctct-gctcctcctcaacctggaatgattgtacactggcaccttc 14485937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 164; Significance: 9e-88; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 59 - 226
Target Start/End: Complemental strand, 41794041 - 41793874
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41794041 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 41793942  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41793941 caaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 41793874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 59 - 253
Target Start/End: Original strand, 49095713 - 49095907
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  49095713 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcaatcggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 49095812  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttcnnnnnnnncggaaccatcgcaaacaat 253  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||    
T  49095813 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttcttttttttcggaaccatcgcaaacaat 49095907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 59 - 226
Target Start/End: Complemental strand, 6176554 - 6176387
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  6176554 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcaatcggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 6176455  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6176454 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 6176387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 59 - 226
Target Start/End: Complemental strand, 21016416 - 21016249
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  21016416 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcaatcggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 21016317  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21016316 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 21016249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 59 - 226
Target Start/End: Original strand, 55797711 - 55797878
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  55797711 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcaattggcttgtccgctacagtccatgcggtaccttgttttggttgaggac 55797810  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  55797811 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacactggcaccttcgaacccttc 55797878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 59 - 226
Target Start/End: Complemental strand, 40353015 - 40352848
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| |||||||||||||||||||||||||||    
T  40353015 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcaatcggcttgtccgctacagtcgctgcggtaccttgttttggttgaggac 40352916  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  40352915 cgaaatagcatgtcctcccgctcctcctcaacctcgactgattgtacactggcaccttcgaacccttc 40352848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 59 - 226
Target Start/End: Complemental strand, 34152403 - 34152236
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || |  || ||| ||||||||||||||| || |||||| |||||||||||||    
T  34152403 caattaggcattaaaagccattacattcattcttcctcgtcacacaagtcaaccgggttgcccgctacagtccctggggcaccttgatttggttgaggac 34152304  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  34152303 caaaatagcatgtcctcccgctcctcctcaacctcgactgattgtacaccggcaccttcgaacccttc 34152236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 59 - 226
Target Start/End: Original strand, 56139983 - 56140150
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    |||||||||||||||| ||| ||||||||||| |||||||||||||| || || || ||| ||||||||||||||| || ||||||||||||||||||||    
T  56139983 caattaggcattaaaaaccactacattcattcatcctcgtcacacaagtcaatcgggttgcccgctacagtccctggggcaccttgttttggttgaggac 56140082  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  56140083 caaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacactggcaccttcgaacccttc 56140150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 59 - 225
Target Start/End: Original strand, 37867540 - 37867706
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||| || ||||| | | ||||||||||||||| || |||||||||| |||||||||    
T  37867540 caattaagcattaaaagccattacattcattattcctcgtcacacaagtcaattgggtcgcccgctacagtccctggggcaccttgtttttgttgaggac 37867639  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaaccctt 225  Q
    | ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  37867640 caaaataacatgtcctcccgctcctcctcaacctcgagtgattatacaccggcaccttcgaaccctt 37867706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 59 - 225
Target Start/End: Complemental strand, 6281642 - 6281476
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||| || || || ||| |||||| |||||||| || ||||||||||| |||||||     
T  6281642 caattaggcattaaaaaccattatattcattcttcctcgtcacacaagtcaatcgggttgcccgctaaagtccctggggcaccttgttttgattgaggat 6281543  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaaccctt 225  Q
    | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  6281542 caaaatagcatgtcctcctgctcctcctcaacctcgagtgattgtacaccggcaccttcgaaccctt 6281476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 60 - 226
Target Start/End: Complemental strand, 49422870 - 49422708
Alignment:
Q  60 aattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggacc 159  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||    | ||| |||||| ||||| || || |||||||||||||||||||||    
T  49422870 aattaggcattaaaagccattacattcattcttcctcgtcacacaagtcg----ggttgcccgctaaagtccttggggcaccttgttttggttgaggacc 49422775  T
Q  160 gaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
     ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  49422774 aaaatagcatgtcctcccactcctcctcaacctcgactgattgtacaccggcaccttcgaacccttc 49422708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 59 - 226
Target Start/End: Complemental strand, 956571 - 956404
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||  | |  |  ||| | ||||||||||||| || ||||||||||||||||||||    
T  956571 caattaggcattaaaagtcattacattcattcttcctcgtcacacaagccaaacgagttgcctgctacagtccctggggcaccttgttttggttgaggac 956472  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    | |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  956471 caaaatagcatgtcctcccgctcctcctcaacctggactgattgtacaccggcaccttcgaacccttc 956404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 59 - 226
Target Start/End: Complemental strand, 44559444 - 44559277
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||| || |  || ||| ||||||||||| ||| || |||||| |||||||||||||    
T  44559444 caattaggcattaaaagtcattacattcattctgcctcgtcacacaagtcaaacgggttgcccgctacagtctctggggcaccttgatttggttgaggac 44559345  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  44559344 caaaatagcatgtcctcccgctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttc 44559277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 82 - 226
Target Start/End: Complemental strand, 34528914 - 34528770
Alignment:
Q  82 cattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctc 181  Q
    ||||||||| |||||||||||||| || || || ||  |||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  34528914 cattcattcatcctcgtcacacaagtcaatcgggtttcccgctacaatccctgcggcaccttgttttggttgaggaccaaaatagcatgtcctcccgctc 34528815  T
Q  182 ctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  34528814 ctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 34528770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 82 - 226
Target Start/End: Original strand, 1043836 - 1043980
Alignment:
Q  82 cattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctc 181  Q
    ||||||||| |||||||||||||| || || || ||  |||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||| |||||    
T  1043836 cattcattcatcctcgtcacacaagtcaatcgggtttcccgctacagtccctgcggcaccttgttttggttgaggaccaaaatagcatgttctctcgctc 1043935  T
Q  182 ctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  1043936 ctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 1043980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 82 - 226
Target Start/End: Original strand, 39589872 - 39590016
Alignment:
Q  82 cattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctc 181  Q
    ||||||||| |||||||||||||| || || || ||  |||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||    
T  39589872 cattcattcatcctcgtcacacaagtcaatcgggtttcccgctacagtccctacggcaccttgttttggttgaggaccaaaatagcatgtcctcccgctc 39589971  T
Q  182 ctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    |||||||||||| ||||||||||||||||||||||||||||||||    
T  39589972 ctcctcaacctcaagtgattgtacaccggcaccttcgaacccttc 39590016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 59 - 226
Target Start/End: Complemental strand, 51427319 - 51427151
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| || || || ||| |||||| |||||||| ||  |||||||||||||||||||    
T  51427319 caattaggaattaaaagccattacattcattcttcctcgtcacacaagtcaatcgggttgcccgctatagtccctggggcgccttgttttggttgaggac 51427220  T
Q  159 c-gaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    |  ||||||||||||||||||||||||||||||||||| | ||||||||| |||||||||||| |||||    
T  51427219 caaaaatagcatgtcctcccgctcctcctcaacctcgactaattgtacactggcaccttcgaatccttc 51427151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 59 - 226
Target Start/End: Original strand, 49572190 - 49572357
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| || || || |||  | ||||| |||||  || ||||||||||||||||||||    
T  49572190 caattaggcattaaaagtcattacattcattcttcctcgtcacacaagtcaatcgggttgcacactacaatccctatggcaccttgttttggttgaggac 49572289  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    | |||||||||||| ||||||||||||||||||| || |||||||||||||||||| |||||||||||    
T  49572290 caaaatagcatgtcatcccgctcctcctcaacctggactgattgtacaccggcaccctcgaacccttc 49572357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 59 - 222
Target Start/End: Original strand, 9490555 - 9490718
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    |||||||||||||||||||| ||||| ||||| ||||| ||| |||| || || || ||| |||||| |||||||| || |||||||||||| |||||||    
T  9490555 caattaggcattaaaagccactacatccattcatcctcatcagacaagtcaatcgggttgcccgctatagtccctggggcaccttgttttggctgaggac 9490654  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacc 222  Q
    | |||||||||||||||| |||||||||||||||||||||||||||||||| ||| ||||||||    
T  9490655 caaaatagcatgtcctccagctcctcctcaacctcgagtgattgtacaccgacacattcgaacc 9490718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 59 - 226
Target Start/End: Complemental strand, 21411099 - 21410929
Alignment:
Q  59 caattaggcattaaaagccattacattcattc---ttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgag 155  Q
    ||||||||||| | ||||||||||||||| ||   ||||||||||||||| || ||||| |||||| |  ||||||||| || ||||  |||||||||||    
T  21411099 caattaggcatcacaagccattacattcaatcatcttcctcgtcacacaagtcaattgggttgtcctcgccagtccctgtggcacctgcttttggttgag 21411000  T
Q  156 gaccgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    |||| |||||||||||||||||||| ||||||||||| || ||||||||||||||||||||| || |||||    
T  21410999 gaccaaaatagcatgtcctcccgcttctcctcaaccttgactgattgtacaccggcaccttcaaatccttc 21410929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 59 - 226
Target Start/End: Original strand, 21412347 - 21412517
Alignment:
Q  59 caattaggcattaaaagccattacattcattc---ttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgag 155  Q
    ||||||||||| | ||||||||||||||| ||   ||||||||||||||| || ||||| |||||| |  ||||||| | || ||||  |||||||||||    
T  21412347 caattaggcatcacaagccattacattcaatcatcttcctcgtcacacaagtcaattgggttgtcctcgccagtcccagaggcacctgcttttggttgag 21412446  T
Q  156 gaccgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    |||| |||||||||||||||||||| ||||||||||| || ||||||||||||||||||||| || |||||    
T  21412447 gaccaaaatagcatgtcctcccgcttctcctcaaccttgactgattgtacaccggcaccttcaaatccttc 21412517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 120 - 218
Target Start/End: Complemental strand, 4784399 - 4784301
Alignment:
Q  120 ccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcg 218  Q
    ||||||||||||||| || || || ||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||    
T  4784399 ccgctacagtccctggggcacattcttttggttgaggaccaaaatagcatgtccccccgctcctcctcaacctcgaatgattgtacaccggcaacttcg 4784301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 59 - 220
Target Start/End: Original strand, 25145619 - 25145783
Alignment:
Q  59 caattaggcattaaaagccattacattcattc---ttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgag 155  Q
    ||||||| ||||| ||||||||||||||| ||   |||||||||||| || || ||||| |||||| | ||||||||||  | ||||  |||||||||||    
T  25145619 caattagacattacaagccattacattcaatcatcttcctcgtcacataagtcaattgggttgtcctcgacagtccctggcgcacctgcttttggttgag 25145718  T
Q  156 gaccgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaa 220  Q
    |||||||||| |||||||| ||||||||||||| ||| |  || |||||||||||||||||||||    
T  25145719 gaccgaaataacatgtccttccgctcctcctcagcctgggctggttgtacaccggcaccttcgaa 25145783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 89 - 226
Target Start/End: Original strand, 21170599 - 21170736
Alignment:
Q  89 tcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctca 188  Q
    |||||||| |||||||| || ||||| |||||| | |||||||| | || ||||  |||||| |||||||| |||||||||||||| |||||||||||||    
T  21170599 tcttcctcatcacacaagtcaattgggttgtcctcgacagtcccgggggcacctgcttttggctgaggaccaaaatagcatgtccttccgctcctcctca 21170698  T
Q  189 acctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    ||||||| ||||| |||||| ||||||||||| |||||    
T  21170699 acctcgaatgattatacaccagcaccttcgaatccttc 21170736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 89 - 226
Target Start/End: Complemental strand, 36775572 - 36775435
Alignment:
Q  89 tcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctca 188  Q
    |||||||| |||||||| || ||||| |||||| | || ||||||| || ||||  |||||| |||||||| ||||||||||||||||||||||||||||    
T  36775572 tcttcctcatcacacaagtcaattgggttgtcctcgacggtccctggggcacctgcttttggctgaggaccaaaatagcatgtcctcccgctcctcctca 36775473  T
Q  189 acctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    ||||||| | ||| |||||| ||||||||||| |||||    
T  36775472 acctcgaataattatacaccagcaccttcgaatccttc 36775435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 120 - 221
Target Start/End: Original strand, 42887430 - 42887531
Alignment:
Q  120 ccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcga 219  Q
    |||||||||||  || || ||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  42887430 ccgctacagtcattggggcaccttcttttggttgaggaccaaaataacatgtcctcccgctcctcctcaacctcgactgattgtacaccagcaccttcga 42887529  T
Q  220 ac 221  Q
    ||    
T  42887530 ac 42887531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 89 - 226
Target Start/End: Complemental strand, 49791019 - 49790882
Alignment:
Q  89 tcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctca 188  Q
    |||||||| |||||||| || ||||| |||| | | |||||||||| || ||||  |||||| |||||||| ||||| ||||||||||||||||||||||    
T  49791019 tcttcctcatcacacaagtcaattgggttgttctcgacagtccctggggcacctgcttttggctgaggaccaaaatatcatgtcctcccgctcctcctca 49790920  T
Q  189 acctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    ||||||| ||||| |||| | ||||||||||| |||||    
T  49790919 acctcgaatgattatacatcagcaccttcgaatccttc 49790882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 89 - 226
Target Start/End: Complemental strand, 51026878 - 51026741
Alignment:
Q  89 tcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctca 188  Q
    |||||||| |||||||| || ||||| ||||||   |||||||||| || ||||  |||||| |||||||| |||||||||||| |||||||||||||||    
T  51026878 tcttcctcatcacacaagtcaattgggttgtccttgacagtccctggggcacctgcttttggctgaggaccaaaatagcatgtcatcccgctcctcctca 51026779  T
Q  189 acctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    ||||||| ||||| |||| | ||||||||||| |||||    
T  51026778 acctcgaatgattatacatcagcaccttcgaatccttc 51026741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 59 - 220
Target Start/End: Original strand, 9718344 - 9718507
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttc---ctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgag 155  Q
    ||||||||||| | || |||||||||||| || ||   |||||||||||| || ||||| |||||| | ||||||||||  | |||| | ||||| ||||    
T  9718344 caattaggcatgacaaaccattacattcaatcatctttctcgtcacacaagtcaattgggttgtcctcgacagtccctggagcacct-gctttggctgag 9718442  T
Q  156 gaccgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaa 220  Q
    |||| ||||||||||||||||| |||||||||| ||| || || |||||||||||||||||||||    
T  9718443 gaccaaaatagcatgtcctcccactcctcctcagcctggactggttgtacaccggcaccttcgaa 9718507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 59 - 220
Target Start/End: Original strand, 24076212 - 24076376
Alignment:
Q  59 caattaggcattaaaagccattacattcattc---ttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgag 155  Q
    ||||||| ||||| ||| ||||||||||| ||   |||||||||||||||  | ||||| |||||| | | ||| |||| || ||||  |||||||||||    
T  24076212 caattagacattacaagtcattacattcaatcatcttcctcgtcacacaagacaattgggttgtcctcgagagtgcctggggcacctgcttttggttgag 24076311  T
Q  156 gaccgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaa 220  Q
    |||||||||| || ||||| |||||||||||||||||  | || |||||||||||||| ||||||    
T  24076312 gaccgaaataacaagtccttccgctcctcctcaacctgtaatggttgtacaccggcactttcgaa 24076376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 89 - 226
Target Start/End: Complemental strand, 4910723 - 4910586
Alignment:
Q  89 tcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctca 188  Q
    ||||||||||||||||| || ||||| |||||| | |||||||||  || ||||  |||||| |||||||| ||||||||||||||||||||| ||||||    
T  4910723 tcttcctcgtcacacaagtcaattgggttgtcctcgacagtccctagggcacctgcttttggatgaggaccaaaatagcatgtcctcccgctcttcctca 4910624  T
Q  189 acctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
     ||| || ||||| |||| || ||||||| || |||||    
T  4910623 gcctagaatgattatacatcgacaccttcaaatccttc 4910586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 145 - 226
Target Start/End: Original strand, 45940717 - 45940798
Alignment:
Q  145 ttttggttgaggaccgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||| |||| | ||||||||||| |||||    
T  45940717 ttttggctgaggacccaaatagcatgtcctcccgctcctcctcaacctcgaatgattatacatcagcaccttcgaatccttc 45940798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 89 - 217
Target Start/End: Original strand, 2774140 - 2774267
Alignment:
Q  89 tcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctca 188  Q
    |||||||| |||||||| || ||||| |||||| | |||||||| | || ||||  |||||||||| |||| ||||||||||||||||||||||||||||    
T  2774140 tcttcctcatcacacaagtcaattgggttgtcctcgacagtcccgg-ggcacctgcttttggttgaagaccaaaatagcatgtcctcccgctcctcctca 2774238  T
Q  189 acctcgagtgattgtacaccggcaccttc 217  Q
    ||||||| | ||| |||||  ||||||||    
T  2774239 acctcgaataattatacacaagcaccttc 2774267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 145 - 225
Target Start/End: Original strand, 17292843 - 17292923
Alignment:
Q  145 ttttggttgaggaccgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaaccctt 225  Q
    |||| |||||||||| |||||||||||||||| ||||||||||| ||| || || ||||||||||||||||||||| ||||    
T  17292843 tttttgttgaggaccaaaatagcatgtcctcctgctcctcctcagccttgaatggttgtacaccggcaccttcgaatcctt 17292923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 95 - 207
Target Start/End: Complemental strand, 49816497 - 49816385
Alignment:
Q  95 tcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctcaacctcg 194  Q
    ||||||||||| || || || |||||| | |||||||||  || ||||  |||||| |||||||| |||||||||||||||| |||||||||||||||||    
T  49816497 tcgtcacacaagtcaatcgggttgtcctcgacagtccctagggcacctgcttttggctgaggaccaaaatagcatgtcctccagctcctcctcaacctcg 49816398  T
Q  195 agtgattgtacac 207  Q
    | ||||| |||||    
T  49816397 actgattatacac 49816385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 95 - 208
Target Start/End: Complemental strand, 43888574 - 43888461
Alignment:
Q  95 tcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctcaacctcg 194  Q
    ||||||||||| || || || ||||||   |||||||||| || ||||  |||||| ||||| || |||||||||||||||||||||||||||||||||     
T  43888574 tcgtcacacaagtcaatcggattgtccttgacagtccctggggcacctgcttttggctgagggccaaaatagcatgtcctcccgctcctcctcaacctca 43888475  T
Q  195 agtgattgtacacc 208  Q
    | ||||| ||||||    
T  43888474 aatgattatacacc 43888461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 17054501 - 17054376
Alignment:
Q  95 tcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctcaacctcg 194  Q
    ||||||||||| || ||||| |||||  | ||| ||| || |||||||  |||||| |||||||  || |||||||| ||||||||| || ||||||||     
T  17054501 tcgtcacacaagtcaattgggttgtcatcaacaatccatggggtacctgcttttggctgaggacaaaattagcatgtactcccgctcgtcgtcaacctca 17054402  T
Q  195 agtgattgtacaccggcaccttcgaa 220  Q
    | ||||| |||||| |||| ||||||    
T  17054401 actgattatacaccagcacattcgaa 17054376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 226
Target Start/End: Original strand, 47873245 - 47873290
Alignment:
Q  181 cctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    ||||||||||||||| ||||| |||||| ||||||||||| |||||    
T  47873245 cctcctcaacctcgaatgattatacaccagcaccttcgaatccttc 47873290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 164; Significance: 9e-88; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 59 - 226
Target Start/End: Original strand, 17425761 - 17425928
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17425761 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 17425860  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17425861 tgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 17425928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 59 - 226
Target Start/End: Original strand, 28476477 - 28476644
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  28476477 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcaattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 28476576  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  28476577 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacactggcaccttcgaacccttc 28476644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 59 - 226
Target Start/End: Original strand, 43983697 - 43983864
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  43983697 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcaatcggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 43983796  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43983797 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 43983864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 60 - 226
Target Start/End: Complemental strand, 3936539 - 3936373
Alignment:
Q  60 aattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggacc 159  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||    
T  3936539 aattaggcattaaaagccattacattcattcttcctcgtcacacaaatcaatcggcttgtccgctacagtccctgcggtaccttgttttggttgaggacc 3936440  T
Q  160 gaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3936439 gaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 3936373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 59 - 226
Target Start/End: Original strand, 22002797 - 22002964
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  22002797 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcaatcggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 22002896  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  22002897 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacactggcaccttcgaacccttc 22002964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 59 - 222
Target Start/End: Complemental strand, 39799104 - 39798941
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||| ||||||||||||||||||||||||||||    
T  39799104 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcaatctgcttgtccgctacagttcctgcggtaccttgttttggttgaggac 39799005  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacc 222  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  39799004 cgaaatagcatgtcctcccgctcctcctcaaccgcgagtgattgtacactggcaccttcgaacc 39798941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 59 - 226
Target Start/End: Original strand, 16582895 - 16583062
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||| || || || ||| || |||||||||||  || |||||||||| |||||||||    
T  16582895 caattatgcattaaaagtcattacattcattcttcctcgtcacacaagtcaatcgggttgccctctacagtccctagggcaccttgtttttgttgaggac 16582994  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16582995 caaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 16583062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 59 - 226
Target Start/End: Complemental strand, 19470740 - 19470573
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || || || ||| ||||||||||||||  || ||||||||||||||||||||    
T  19470740 caattaggcattaaaagccattacattcattcttcctcgtcacacaagtcaatcgggttgcccgctacagtccctagggcaccttgttttggttgaggac 19470641  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    | |||||||||||||||||||||||||||||||| || |||||||||||||  |||||||||||||||    
T  19470640 caaaatagcatgtcctcccgctcctcctcaacctggactgattgtacaccgagaccttcgaacccttc 19470573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 59 - 222
Target Start/End: Original strand, 35492618 - 35492780
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| || || || ||| || |||||||||||| || ||||||||||||||||||||    
T  35492618 caattaggcattaaaa-ccattacattcattcttcctcgtcacacaagtcaatcgggttgcccactacagtccctggggcaccttgttttggttgaggac 35492716  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacc 222  Q
    | ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  35492717 caaaatagcatgtcctcccgctcctcctcaacctcgagtaattgtacaccggcaccttcgaacc 35492780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 59 - 222
Target Start/End: Complemental strand, 41498237 - 41498074
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    ||||||||||||||||| |||||||||||||||| || ||||||||| || || || ||| ||||||||||||||| || ||||||||||||||||||||    
T  41498237 caattaggcattaaaagtcattacattcattcttacttgtcacacaagtcaatcgggttggccgctacagtccctggggcaccttgttttggttgaggac 41498138  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacc 222  Q
    |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  41498137 cgaaatagcatgtcctcccgctcctcctcaacctggactgattgtacaccggcaccttcgaacc 41498074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 60 - 226
Target Start/End: Original strand, 23408807 - 23408973
Alignment:
Q  60 aattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggacc 159  Q
    |||||||||||||||| |||||||||||||||||||| |||||||| || || || ||| |||||||| |||||| ||||||||| ||||||||||||||    
T  23408807 aattaggcattaaaagtcattacattcattcttcctcatcacacaagtcaatcgggttgcccgctacaatccctggggtaccttgatttggttgaggacc 23408906  T
Q  160 gaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
     ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  23408907 aaaatagcatgtcctcccgctcctcctcaaactcgactgattgtacaccggcaccttcgaacccttc 23408973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 59 - 226
Target Start/End: Original strand, 43492545 - 43492712
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| || || || ||||||| ||||||| ||| || ||||||||||||||||||||    
T  43492545 caattaggcattaaaagtcattacattcattcttcctcgtcacacaagtcaatcgggttgtccgttacagtcactggggcaccttgttttggttgaggac 43492644  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    | ||||||||||||||||| |||||| ||||||| || ||||||||||||||||||||||||||||||    
T  43492645 caaaatagcatgtcctcccactcctcgtcaacctggactgattgtacaccggcaccttcgaacccttc 43492712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 59 - 225
Target Start/End: Complemental strand, 2918483 - 2918317
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| || |  || ||| || ||||||||| || || ||||||||||||||||||||    
T  2918483 caattaggcattaaaagtcattacattcattcttcctcgtcacacaagtcaaccgggttgcccactacagtccatggggcaccttgttttggttgaggac 2918384  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaaccctt 225  Q
    | |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||    
T  2918383 caaaatagcatgtcctcctgctcctcctcaacctcgactgattgtacaccggcaccttcgaaccctt 2918317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 59 - 225
Target Start/End: Complemental strand, 40676537 - 40676371
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| |  || || ||| | |||||||||| || || ||||||||||| || |||||    
T  40676537 caattaggcattaaaagccattacattcattcttcctagtcacacaagtgaatcgggttgcctgctacagtccatggggcaccttgttttgattaaggac 40676438  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaaccctt 225  Q
      |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| ||||    
T  40676437 gaaaatagcatgtcctcccgctcctcctcaaccttgactgattgtacaccggcaccttcgaatcctt 40676371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 82 - 226
Target Start/End: Original strand, 3942495 - 3942639
Alignment:
Q  82 cattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctc 181  Q
    ||||||||| | |||||||||||| || || || ||  |||||||||||| ||| | |||||||||| |||||||||| ||||||||| |||||||||||    
T  3942495 cattcattcattctcgtcacacaagtcaatcgggtttcccgctacagtccatgccgcaccttgttttagttgaggaccaaaatagcatatcctcccgctc 3942594  T
Q  182 ctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    |||||||||||| ||||||||||||||||||||||||||||||||    
T  3942595 ctcctcaacctcaagtgattgtacaccggcaccttcgaacccttc 3942639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 89 - 220
Target Start/End: Original strand, 6977952 - 6978083
Alignment:
Q  89 tcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctca 188  Q
    |||||||| ||||||||||| ||||| |||||| | |||||||||  || ||||  ||||||||||||||| ||||||||||||||||||||||||||||    
T  6977952 tcttcctcatcacacaaatcaattgggttgtcctcgacagtcccttgggcacctgcttttggttgaggaccaaaatagcatgtcctcccgctcctcctca 6978051  T
Q  189 acctcgagtgattgtacaccggcaccttcgaa 220  Q
    ||||||| ||||| |||||| |||||||||||    
T  6978052 acctcgaatgattatacaccagcaccttcgaa 6978083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 59 - 226
Target Start/End: Original strand, 33404838 - 33405008
Alignment:
Q  59 caattaggcattaaaagccattacattcat---tcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgag 155  Q
    |||||||| |||| |||||| ||||||||    |||||||| |||||||| || || || ||| || | |||||||||| || ||||  |||||||||||    
T  33404838 caattaggtattacaagccactacattcaagcatcttcctcctcacacaagtcaatcgggttgccctcgacagtccctggggcacctacttttggttgag 33404937  T
Q  156 gaccgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    |||| |||||||||||||| |||||||||||||||||||| |||||||||||| ||||||| ||| |||||    
T  33404938 gaccaaaatagcatgtcctaccgctcctcctcaacctcgactgattgtacaccagcacctttgaatccttc 33405008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 89 - 226
Target Start/End: Complemental strand, 16413362 - 16413226
Alignment:
Q  89 tcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctca 188  Q
    ||||||||||||||||| || || || |||||| |  |||||||||| | ||||  ||||||||||| ||| ||||| |||||| |||||||||||||||    
T  16413362 tcttcctcgtcacacaagtcaatcgggttgtcctcgccagtccctgcagcacctgcttttggttgag-accaaaataacatgtcttcccgctcctcctca 16413264  T
Q  189 acctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    ||||||| ||||||||||| | |||||||||| |||||    
T  16413263 acctcgaatgattgtacactgacaccttcgaatccttc 16413226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 89 - 225
Target Start/End: Complemental strand, 15891060 - 15890925
Alignment:
Q  89 tcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctca 188  Q
    |||||||| |||||||| || ||||| |||||  | |||||||||| || ||||  ||||||||||||||| |||||||||||||| |||||||||||||    
T  15891060 tcttcctcatcacacaagtcaattgggttgtct-cgacagtccctggggcacctgcttttggttgaggaccaaaatagcatgtccttccgctcctcctca 15890962  T
Q  189 acctcgagtgattgtacaccggcaccttcgaaccctt 225  Q
    ||||  | ||||||||||||  |||||||||| ||||    
T  15890961 acctaaaatgattgtacaccaacaccttcgaatcctt 15890925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 89 - 217
Target Start/End: Complemental strand, 17537998 - 17537870
Alignment:
Q  89 tcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctca 188  Q
    |||||||| |||||||| || ||||| |||||| | ||||||  || |  ||||  |||||| |||||||| ||||||||||||||||||||||||||||    
T  17537998 tcttcctcatcacacaagtcaattgggttgtcctcgacagtctatgggacacctgtttttggctgaggaccaaaatagcatgtcctcccgctcctcctca 17537899  T
Q  189 acctcgagtgattgtacaccggcaccttc 217  Q
    ||||||| ||||| |||||| ||||||||    
T  17537898 acctcgaatgattatacaccagcaccttc 17537870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 161 - 225
Target Start/End: Complemental strand, 23786804 - 23786740
Alignment:
Q  161 aaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaaccctt 225  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  23786804 aaatagcatgtcatcccgctcctcctcaacctcgagtgattgtacactggcaccttcgaaccctt 23786740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 68 - 226
Target Start/End: Original strand, 5421234 - 5421395
Alignment:
Q  68 attaaaagccattacattcattc---ttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaat 164  Q
    ||||||| |||||||||||| ||   |||||| |||||||| || ||||| |||||| | | |||||||| || ||||  |||||| |||||||| ||||    
T  5421234 attaaaacccattacattcaatcatcttcctcatcacacaagtcaattgggttgtcctcgagagtccctggggcacctgcttttggctgaggaccaaaat 5421333  T
Q  165 agcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    ||||||| || |||||||||||||||||| | ||||| | |||| ||||||||||| |||||    
T  5421334 agcatgttctgccgctcctcctcaacctcaaatgattatgcaccagcaccttcgaatccttc 5421395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 89 - 226
Target Start/End: Complemental strand, 34520805 - 34520668
Alignment:
Q  89 tcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctca 188  Q
    |||||||| |||||||| || |||||  ||||| | || ||||||  || ||||  |||||| ||| |||| ||||||||||||||||||||||||||||    
T  34520805 tcttcctcatcacacaagtcaattgggatgtcctcgacggtccctcgggcacctgcttttggctgaagaccaaaatagcatgtcctcccgctcctcctca 34520706  T
Q  189 acctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    ||||||| ||||| ||||||  |||||||||| |||||    
T  34520705 acctcgaatgattatacaccaacaccttcgaatccttc 34520668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 99 - 226
Target Start/End: Complemental strand, 37311720 - 37311593
Alignment:
Q  99 cacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctcaacctcgagtg 198  Q
    ||||||| || || || |||||| | |||||||||| || ||||  |||||| |||||| | |||||||||||||||||||||||| |||||||||| ||    
T  37311720 cacacaagtcaatcgggttgtcctcgacagtccctggggcacctacttttggctgaggatcaaaatagcatgtcctcccgctcctcatcaacctcgaatg 37311621  T
Q  199 attgtacaccggcaccttcgaacccttc 226  Q
    ||| |||||| |||||||| || |||||    
T  37311620 attatacaccagcaccttcaaatccttc 37311593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 145 - 226
Target Start/End: Complemental strand, 24107802 - 24107721
Alignment:
Q  145 ttttggttgaggaccgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    |||||| |||||||| ||||||||| ||||| ||||||||||||||||||| ||||| ||||||  ||| |||||| |||||    
T  24107802 ttttggctgaggaccaaaatagcatttcctctcgctcctcctcaacctcgaatgattatacaccaacacattcgaatccttc 24107721  T

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Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 220
Target Start/End: Complemental strand, 28272662 - 28272587
Alignment:
Q  145 ttttggttgaggaccgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaa 220  Q
    |||| |||||||||| ||||| || ||||| || |||||||| | ||| || ||||||||||||| ||||||||||    
T  28272662 ttttagttgaggaccaaaataacaagtccttccactcctccttagcctggaatgattgtacaccgacaccttcgaa 28272587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 160; Significance: 2e-85; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 59 - 226
Target Start/End: Original strand, 54391424 - 54391591
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  54391424 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcaatcggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 54391523  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54391524 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 54391591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 59 - 226
Target Start/End: Original strand, 46405987 - 46406154
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  46405987 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcaatcggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 46406086  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  46406087 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacatcggcaccttcgaacccttc 46406154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 59 - 226
Target Start/End: Complemental strand, 49139291 - 49139124
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  49139291 caattaggcattaaaagtcattacattcattcttcctcgtcacacaaatcaatcggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 49139192  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49139191 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 49139124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 59 - 226
Target Start/End: Complemental strand, 2646113 - 2645946
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  2646113 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcaatcggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 2646014  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  2646013 cgaaatagcatgtcctcccgctcctcctcaaccttgagtgattgtacactggcaccttcgaacccttc 2645946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 59 - 226
Target Start/End: Original strand, 34050709 - 34050876
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| |||||||||||||||||||||||    
T  34050709 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcaatcggcttgtccgctacagtccctgtggtaccttgttttggttgaggac 34050808  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34050809 cgaaataacatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 34050876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 59 - 225
Target Start/End: Complemental strand, 2267722 - 2267556
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||  |||||||||||||||||||||||||||||||||||||||    
T  2267722 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcaatcggcttacccgctacagtccctgcggtaccttgttttggttgaggac 2267623  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaaccctt 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  2267622 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccgacaccttcgaaccctt 2267556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 59 - 226
Target Start/End: Complemental strand, 3494261 - 3494094
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  3494261 caattaggcattaaaagccattacattcattcttcctcgtcacataaatcaattggcttgtccgctatagtccctgcggtaccttgttttggttgaggac 3494162  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    |||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  3494161 cgaaatagcatgtcctcccgctcctcctgaacctccagtgattgtaaaccggcaccttcgaacccttc 3494094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 59 - 226
Target Start/End: Complemental strand, 4003391 - 4003224
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||||| || || ||| |||||||||||||||||||||||||||||||||||||||    
T  4003391 caattaggcattaaaagccattacattcattcttcgtcgtcagacaaatcaatcgggttgcccgctacagtccctgcggtaccttgttttggttgaggac 4003292  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4003291 cgaaatagcatgtccttccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 4003224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 36136001 - 36136163
Alignment:
Q  63 taggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaa 162  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || || ||| ||||||| |||||| ||||||||||||||||||||||||||||    
T  36136001 taggcattaaaagccattacattcattcttcctcgtcacacaaatcaatcgggttgcccgctac-gtcccttcggtaccttgttttggttgaggaccgaa 36136099  T
Q  163 atagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36136100 atagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 36136163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 59 - 226
Target Start/End: Complemental strand, 51694673 - 51694506
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| || ||||| ||  |||||||||||||||||  |||||||||||||| ||||     
T  51694673 caattaggcattaaaagccattacattcattcatcctcgtcacacaagtcaattgggtttcccgctacagtccctgcgacaccttgttttggtttaggaa 51694574  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51694573 caaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 51694506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 60 - 226
Target Start/End: Original strand, 2429568 - 2429734
Alignment:
Q  60 aattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggacc 159  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || || || ||| |||||| |||||||| || |||||||||||||||||||||    
T  2429568 aattaggcattaaaagccattacattcattcttcctcgtcacacaagtcaatcgggttgcccgctatagtccctggggcaccttgttttggttgaggacc 2429667  T
Q  160 gaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
     |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  2429668 aaaatagcatgtcttcccgctcctgctcaacctcgagtgattgtacaccggcaccttcgaacccttc 2429734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 59 - 226
Target Start/End: Original strand, 43570965 - 43571132
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| || || || ||| ||||||||||||||| || |||||| |||||| ||||||    
T  43570965 caattaggcattaaaagccatcacattcattcttcctcgtcacacaagtcaatcgggttgcccgctacagtccctgaggcaccttgatttggtcgaggac 43571064  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    | ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  43571065 caaaatagcatgtcctcccgctcctcctcaacctcgactgattgtacatcggcaccttcgaacccttc 43571132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 59 - 226
Target Start/End: Complemental strand, 45099588 - 45099421
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    |||||||||||||||||||||||||||||||||||||||||||| || || || || ||| |||||||||||||||  | ||||||||||||||||||||    
T  45099588 caattaggcattaaaagccattacattcattcttcctcgtcacaaaagtcaatcgggttgcccgctacagtccctggtgcaccttgttttggttgaggac 45099489  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    | ||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  45099488 caaaataacatgtcctcccgctcatcctcaacctcgactgattgtacaccggcaccttcgaacccttc 45099421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 59 - 222
Target Start/End: Complemental strand, 55268198 - 55268035
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| || || || ||| || ||| |||||||| || |||||||||||||| |||||    
T  55268198 caattaggcattaaaaaccattacattcattcttcctcgtcacacaagtcaatcgggttgcccactagagtccctggggcaccttgttttggttcaggac 55268099  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacc 222  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  55268098 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcacctttgaacc 55268035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 61 - 222
Target Start/End: Complemental strand, 34692419 - 34692258
Alignment:
Q  61 attaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccg 160  Q
    ||||||||||||||| |||||||||||||| |||||||||||||| || || || ||  ||||||||||||| |||| |||||||||||||||||||||     
T  34692419 attaggcattaaaagtcattacattcattcatcctcgtcacacaagtcaatcgggtttcccgctacagtccccgcggcaccttgttttggttgaggacca 34692320  T
Q  161 aaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacc 222  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34692319 aagtagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacc 34692258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 59 - 226
Target Start/End: Complemental strand, 13895023 - 13894857
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| || || || ||| || ||||| |||||| || |||||||||| |||||||||    
T  13895023 caattaggcattaaaagccattacattcattcttccttgtcacacaagtcaatcgggttgccc-ctacaatccctggggcaccttgtttttgttgaggac 13894925  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  13894924 caaaatagcatgtcctcccgctcctcctcaacctcgaatgattgtacaccggcaccttcgaacccttc 13894857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 60 - 226
Target Start/End: Complemental strand, 52568557 - 52568391
Alignment:
Q  60 aattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggacc 159  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| || || |  ||| || |||||||||||| || |||||||||||||||| || |    
T  52568557 aattaggcattaaaagccattacattcattcttccttgtcacacaagtcaatcgtgttgcccactacagtccctggggcaccttgttttggttgatgatc 52568458  T
Q  160 gaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
     ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52568457 aaaatagcatgtgctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 52568391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 59 - 225
Target Start/End: Original strand, 41579008 - 41579174
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || ||  | ||| |||||| |||| ||| || ||||||||||||||||||||    
T  41579008 caattaggcattaaaagccattacattcattcttcctcgtcacacaagtcaatcaggttgcccgctatagtcactggggcaccttgttttggttgaggac 41579107  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaaccctt 225  Q
    | |||||||||||| ||||||||||||||||||| || ||||||||||||||||||||| |||||||    
T  41579108 caaaatagcatgtcttcccgctcctcctcaacctggactgattgtacaccggcaccttcaaaccctt 41579174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 59 - 226
Target Start/End: Complemental strand, 49217867 - 49217699
Alignment:
Q  59 caattaggcattaaaa-gccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgagga 157  Q
    |||||||||||||||| |||| ||||||||||| |||||||||||||| |  || || ||  |||||||||||||||||| |||||||||||||||||||    
T  49217867 caattaggcattaaaatgccactacattcattcatcctcgtcacacaagttaatcgggtttcccgctacagtccctgcggcaccttgttttggttgagga 49217768  T
Q  158 ccgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    || |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  49217767 ccaaaatagcatgtcttcccgctcctcctcaacctcgagtgattgtacacccgcaccttcgaactcttc 49217699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 59 - 218
Target Start/End: Complemental strand, 46345724 - 46345565
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| || || |  ||| |||||||||||| || || |||||||||| |||||||||    
T  46345724 caattaggcattaaaagccattacattcattattcctcgtcacacaagtcaatcgagttgcccgctacagtccatggggcaccttgtttttgttgaggac 46345625  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcg 218  Q
    |||||||||||||||||||||| ||||||||||| || ||||||||||||||||||||||    
T  46345624 cgaaatagcatgtcctcccgctgctcctcaacctggactgattgtacaccggcaccttcg 46345565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 59 - 226
Target Start/End: Original strand, 7247141 - 7247309
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagt-ccctgcggtaccttgttttggttgagga 157  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| || || || ||| |||||| | | ||||| || |||||||||||||||||||    
T  7247141 caattaggcattaaatgccattacattcattcttcctcgtcacacaagtcaatcgggttgcccgctatatttccctggggcaccttgttttggttgagga 7247240  T
Q  158 ccgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    || ||||||||||||||| |||||||||||||||| || ||||||||||||| ||||||||||||||||    
T  7247241 ccaaaatagcatgtcctctcgctcctcctcaacctggactgattgtacaccgacaccttcgaacccttc 7247309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 60 - 222
Target Start/End: Complemental strand, 55206058 - 55205898
Alignment:
Q  60 aattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggacc 159  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||| || ||  | ||| || |||||||||||| || |||||||||||||||||||||    
T  55206058 aattaggcattaaaaaccattacattcat-cttcctcgtcacacaagtcaatcaggttgcccactacagtccctggggcaccttgttttggttgaggacc 55205960  T
Q  160 gaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacc 222  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| ||||| |||||||||    
T  55205959 gaaatagcatgtcctcccgctcctcctcaacctcgaatgattgtacatcggca-cttcgaacc 55205898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 83 - 226
Target Start/End: Original strand, 43478134 - 43478277
Alignment:
Q  83 attcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcc 182  Q
    |||||||| |||||||||||||| || || || ||  |||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||    
T  43478134 attcattcatcctcgtcacacaagtcaatcgggtttcccgctacagtccctgcggcaccctgttttggttgaggaccaaaatagcatgtcctcccgctcc 43478233  T
Q  183 tcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    ||||||||||||||||||||||||| | ||||||||||||||||    
T  43478234 tcctcaacctcgagtgattgtacacagacaccttcgaacccttc 43478277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 127 - 226
Target Start/End: Complemental strand, 3497887 - 3497788
Alignment:
Q  127 agtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  3497887 agtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctgaacctccagtgattgtaaaccggcaccttcgaacccttc 3497788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 82 - 216
Target Start/End: Original strand, 49611260 - 49611394
Alignment:
Q  82 cattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctc 181  Q
    ||||||||| | |||||||||||| || ||  | ||  |||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  49611260 cattcattcattctcgtcacacaagtcaatcaggtttcccgctacagtccctgcggcaccttgttttggttgaggaccaaaatagcatgtcctcccgctc 49611359  T
Q  182 ctcctcaacctcgagtgattgtacaccggcacctt 216  Q
    ||||||||||||||||||||||||||||| |||||    
T  49611360 ctcctcaacctcgagtgattgtacaccggtacctt 49611394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 120 - 226
Target Start/End: Complemental strand, 34646279 - 34646173
Alignment:
Q  120 ccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcga 219  Q
    ||||||||||||||  || ||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  34646279 ccgctacagtccctagggcaccttcttttggttgaggaccaaaatagcatgtcctcccactcctcctcaacctcgattgattgtacaccggcaccttcga 34646180  T
Q  220 acccttc 226  Q
    |||||||    
T  34646179 acccttc 34646173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 89 - 226
Target Start/End: Complemental strand, 11378070 - 11377933
Alignment:
Q  89 tcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctca 188  Q
    |||||||| |||||||| || ||||| |||||| | |||||||||  || ||||  |||||| |||||||| ||||||||||||||||||||||||||||    
T  11378070 tcttcctcatcacacaagtcaattgggttgtcctcgacagtccctagggcacctgcttttggctgaggaccaaaatagcatgtcctcccgctcctcctca 11377971  T
Q  189 acctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    ||||||| ||||| |||||| ||||||||||| |||||    
T  11377970 acctcgaatgattatacaccagcaccttcgaatccttc 11377933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 89 - 226
Target Start/End: Original strand, 49274547 - 49274684
Alignment:
Q  89 tcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctca 188  Q
    |||||||||| |||||| || ||||| |||||| | |||||||||| |  ||||  |||||| |||||||| ||||||||||||||||||||||||||||    
T  49274547 tcttcctcgtaacacaagtcaattgggttgtcctcgacagtccctgggacacctgcttttggctgaggaccaaaatagcatgtcctcccgctcctcctca 49274646  T
Q  189 acctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    ||||||| ||||| |||||| ||||||||||| |||||    
T  49274647 acctcgaatgattatacaccagcaccttcgaatccttc 49274684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 60 - 226
Target Start/End: Complemental strand, 27096812 - 27096642
Alignment:
Q  60 aattaggcattaaaagccattacattca-ttc---ttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgag 155  Q
    |||||||||||| || |||||||||||| |||   ||||||||||||||| || ||||| |||||| | |||||  ||| || ||||  |||||||||||    
T  27096812 aattaggcattagaaaccattacattcaattcattttcctcgtcacacaagtcaattgggttgtcctcgacagtttctggggcacctgcttttggttgag 27096713  T
Q  156 gaccgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
      || |||||||||||||||||||||||||||||||| || |||||||||||||| ||||||||| |||||    
T  27096712 agccaaaatagcatgtcctcccgctcctcctcaacctagaatgattgtacaccggtaccttcgaatccttc 27096642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 89 - 226
Target Start/End: Complemental strand, 34471150 - 34471013
Alignment:
Q  89 tcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctca 188  Q
    |||||||| |||||||| || ||||| || ||| | |||||||||  || ||||  |||||| |||||||| ||||||||||||||||||||||||||||    
T  34471150 tcttcctcatcacacaagtcaattgggttttcctcgacagtccctagggcacctgcttttggctgaggaccaaaatagcatgtcctcccgctcctcctca 34471051  T
Q  189 acctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    ||||||| ||||| |||||| ||||||||||| |||||    
T  34471050 acctcgaatgattatacaccagcaccttcgaatccttc 34471013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 89 - 217
Target Start/End: Original strand, 44928588 - 44928716
Alignment:
Q  89 tcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctca 188  Q
    |||||||| |||||||| || ||||| |||||| | |||||||||| || ||||  |||||| |||||||| ||||||||||||||||||||||||||||    
T  44928588 tcttcctcatcacacaattcaattgggttgtcctcgacagtccctggggaacctgcttttggctgaggaccaaaatagcatgtcctcccgctcctcctca 44928687  T
Q  189 acctcgagtgattgtacaccggcaccttc 217  Q
    ||||||| ||||| |||||  ||||||||    
T  44928688 acctcgaatgattatacactagcaccttc 44928716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 59 - 226
Target Start/End: Complemental strand, 50458372 - 50458202
Alignment:
Q  59 caattaggcattaaaagccattacattcattc---ttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgag 155  Q
    |||||||  |||| || |||||||||||||||   ||||||  ||||||| || ||||| |||||| | |||||||||| || ||||  |||||| ||||    
T  50458372 caattagatattacaacccattacattcattcatcttcctcaccacacaagtcaattgggttgtcctcgacagtccctggggcacctgcttttggctgag 50458273  T
Q  156 gaccgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    |||| ||||||||||||||||||||| ||||||||||||| ||||| |||||| |||| |||||| |||||    
T  50458272 gaccaaaatagcatgtcctcccgctcttcctcaacctcgaatgattatacaccagcactttcgaatccttc 50458202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 59 - 220
Target Start/End: Complemental strand, 51012408 - 51012244
Alignment:
Q  59 caattaggcattaaaagccattacattcattc---ttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgag 155  Q
    |||||||  |||| || |||||||||||| ||   |||||| |||||||| || ||||| ||||||   ||||| |||| || ||||  |||||| ||||    
T  51012408 caattagatattacaacccattacattcaatcatattcctcatcacacaagtcaattgggttgtccttgacagttcctggggcacctgcttttggctgag 51012309  T
Q  156 gaccgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaa 220  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||||||    
T  51012308 gaccaaaatagcatgtcctcccgctcctcctcaacctcgaatgattatacaccagcaccttcgaa 51012244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 59 - 226
Target Start/End: Complemental strand, 20375098 - 20374929
Alignment:
Q  59 caattaggcattaaaagccattacattcattc---ttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgag 155  Q
    ||||||||||||| ||||||||||||||| ||   |||||||||||| || || || || ||| ||||  |||||| || || || |  ||||||||||     
T  20375098 caattaggcattagaagccattacattcaatcatcttcctcgtcacataagtcaatcgggttgcccgcggcagtccttg-ggcacttgcttttggttgat 20375000  T
Q  156 gaccgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    |||| |||||||||||||||||||||||||||||| | || ||||||||||||||||||||| || |||||    
T  20374999 gaccaaaatagcatgtcctcccgctcctcctcaacttggaatgattgtacaccggcaccttcaaatccttc 20374929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 100 - 226
Target Start/End: Original strand, 14632606 - 14632732
Alignment:
Q  100 acacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctcaacctcgagtga 199  Q
    |||||| || ||||| | |||| | |||||||||  || ||||  |||||| |||||||| ||||||||||||||||||||||||||||||||||| |||    
T  14632606 acacaagtcaattgggtcgtcctcgacagtccctagggcacctgcttttggctgaggaccaaaatagcatgtcctcccgctcctcctcaacctcgaatga 14632705  T
Q  200 ttgtacaccggcaccttcgaacccttc 226  Q
    || |||||| ||||||||||| |||||    
T  14632706 ttatacaccagcaccttcgaatccttc 14632732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 163 - 226
Target Start/End: Complemental strand, 10052372 - 10052309
Alignment:
Q  163 atagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||| ||||||||||| |||||    
T  10052372 atagcatgtcctcccgctcctcctcaacctcgaatgattatacaccagcaccttcgaatccttc 10052309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 151 - 226
Target Start/End: Original strand, 27188263 - 27188338
Alignment:
Q  151 ttgaggaccgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    ||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||   ||||||||| |||||    
T  27188263 ttgaggagcaaaatagcatgtcctcccgctcctcctcaacctcgactgattgtacaccaaaaccttcgaatccttc 27188338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 89 - 226
Target Start/End: Original strand, 51016416 - 51016553
Alignment:
Q  89 tcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctca 188  Q
    |||||||| |||||||| || ||||| |||||  | ||||||| || || ||||  |||||| |||||||| |||||||||||||| | | | |||||||    
T  51016416 tcttcctcatcacacaagtcaattgggttgtcttcgacagtccatggggcacctgcttttggctgaggaccaaaatagcatgtccttctgtttctcctca 51016515  T
Q  189 acctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    ||||||| ||||| ||||||  |||||||||| |||||    
T  51016516 acctcgaatgattatacaccatcaccttcgaatccttc 51016553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 59 - 210
Target Start/End: Complemental strand, 50341564 - 50341410
Alignment:
Q  59 caattaggcattaaaagccattacattcattc---ttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgag 155  Q
    ||||||| ||||| |||||||| |||||| ||   ||||| ||||||||| || ||||| |||||| | |||||||||  || ||||  |||||||| ||    
T  50341564 caattagacattacaagccatttcattcaatcatcttccttgtcacacaagtcaattggattgtcctcgacagtccctagggcacctgcttttggtttag 50341465  T
Q  156 gaccgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccgg 210  Q
    ||  |||||| |||||||| ||||||||||||| ||| || || |||||||||||    
T  50341464 gatagaaataacatgtccttccgctcctcctcagcctggaatggttgtacaccgg 50341410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 89 - 226
Target Start/End: Complemental strand, 46413378 - 46413240
Alignment:
Q  89 tcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggt-accttg-ttttggttgaggaccgaaatagcatgtcctcccgctcctcct 186  Q
    |||||||| |||||||| || ||||| |||||| | | |||||||| ||  ||| || |||||| |||||| | ||||| |||||||||||||||||||     
T  46413378 tcttcctcatcacacaagtcaattgggttgtcctcgatagtccctgggggcaccctgcttttggctgaggatc-aaatatcatgtcctcccgctcctccg 46413280  T
Q  187 caacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    ||||||||| ||||| |||||| ||||||||||| |||||    
T  46413279 caacctcgaatgattatacaccagcaccttcgaatccttc 46413240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 161 - 226
Target Start/End: Original strand, 18441574 - 18441639
Alignment:
Q  161 aaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    ||||||||||| |||||||||||| ||| ||| || |||||||||| |||||||||||||||||||    
T  18441574 aaatagcatgttctcccgctcctcgtcagccttgattgattgtacatcggcaccttcgaacccttc 18441639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 161 - 226
Target Start/End: Original strand, 19486648 - 19486713
Alignment:
Q  161 aaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    ||||||||||| |||||||||||| ||| ||| || |||||||||| |||||||||||||||||||    
T  19486648 aaatagcatgttctcccgctcctcgtcagccttgattgattgtacatcggcaccttcgaacccttc 19486713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 200
Target Start/End: Original strand, 30193663 - 30193774
Alignment:
Q  89 tcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctca 188  Q
    |||||||| |||||||| || ||||| |||||  | ||||||| || || ||||  |||||  |||||||| ||| | ||||||| ||||||||||||||    
T  30193663 tcttcctcatcacacaagtcaattgggttgtcttcgacagtccatggggcacctgtttttgactgaggaccaaaacaacatgtccacccgctcctcctca 30193762  T
Q  189 acctcgagtgat 200  Q
    ||||||| ||||    
T  30193763 acctcgaatgat 30193774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 226
Target Start/End: Complemental strand, 42322411 - 42322360
Alignment:
Q  175 cccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    ||||||||||||||||||||| ||||| |||||| ||||||||||| |||||    
T  42322411 cccgctcctcctcaacctcgaatgattatacaccagcaccttcgaatccttc 42322360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 24701407 - 24701365
Alignment:
Q  63 taggcattaaaagccattacattcattcttcctcgtcacacaa 105  Q
    ||||||||||||| |||||||||||||| ||||||||||||||    
T  24701407 taggcattaaaagtcattacattcattcatcctcgtcacacaa 24701365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 156; Significance: 6e-83; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 59 - 226
Target Start/End: Complemental strand, 484493 - 484326
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  484493 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcaatcggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 484394  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  484393 caaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 484326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 59 - 226
Target Start/End: Complemental strand, 15031560 - 15031393
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  15031560 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcaatcggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 15031461  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  15031460 cgaaatagcatatcctcccgctcctcctcaacctcgagtgattgtacactggcaccttcgaacccttc 15031393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 59 - 226
Target Start/End: Original strand, 45065757 - 45065924
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||||||    
T  45065757 caattaggcattaaaagtcattacattcattcttcctcgtcacacaaatcaatcggcttgtccgctacagtccatgcggtaccttgttttggttgaggac 45065856  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    |||||||||||||||| |||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  45065857 cgaaatagcatgtccttccgctcctccccaacctcgagtgattgtacactggcaccttcgaacccttc 45065924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 59 - 226
Target Start/End: Complemental strand, 41017089 - 41016922
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||||||| || || ||| ||||||||||||||| |||||||||||||||||||||||    
T  41017089 caattaggcattaaaagtcattacattcattcttcttcgtcacacaaatcaatcgggttgcccgctacagtccctgtggtaccttgttttggttgaggac 41016990  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    |||||||||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||    
T  41016989 cgaaatagcatgtcctcctgctcatcctcaacctcgtgtgattgtacaccggcaccttcgaacccttc 41016922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 59 - 225
Target Start/End: Original strand, 28167883 - 28168049
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || || || ||| ||||||||||||||| || ||||||||||||||||||||    
T  28167883 caattaggcattaaaagccattacattcattcttcctcgtcacacaagtcaatcgggttgcccgctacagtccctggggcaccttgttttggttgaggac 28167982  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaaccctt 225  Q
    | ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  28167983 caaaatagcatgtcctcccgctcctcctcaacctcgactgattgtacaccgacaccttcgaaccctt 28168049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 59 - 226
Target Start/End: Original strand, 41276155 - 41276322
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||| || || || ||  |||||||||||||||||| ||||||||||||||||||||    
T  41276155 caattaggcattaaaagccactacattcattcatcctcgtcacacaagtcaatcgggtttcccgctacagtccctgcggcaccttgttttggttgaggac 41276254  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  41276255 caaaatagcatgtcctcccgctcctcctcaacctcgagtgattatacaccggcaccttcgaacccttc 41276322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 59 - 226
Target Start/End: Complemental strand, 41856117 - 41855950
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    |||||||||||||||| |||||||||||||||||||| |||||||||||| || || ||| ||||||||||||||| || |||||||||||||| || ||    
T  41856117 caattaggcattaaaaaccattacattcattcttccttgtcacacaaatcaatcgggttgcccgctacagtccctggggcaccttgttttggttaagaac 41856018  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41856017 caaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 41855950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 59 - 226
Target Start/End: Original strand, 24862426 - 24862593
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| || |  || ||  |||||||||||||| ||| ||||||||||||||||||||    
T  24862426 caattaggcattaaaagccattacattcattcatcctcgtcacacaagtcaaacgggtttcccgctacagtccctacggcaccttgttttggttgaggac 24862525  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    | ||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||||    
T  24862526 caaaatagcatgtcctcccactcctcctcaacctcgagtgattgtataccagcaccttcgaacccttc 24862593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 60 - 219
Target Start/End: Original strand, 42604532 - 42604691
Alignment:
Q  60 aattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggacc 159  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| || || || ||| || ||  |||||||| || ||||||||||||||||||| |    
T  42604532 aattaggcattaaaaaccattacattcattcttcctcgtcacacaagtcaatcgggttgcccactggagtccctggggcaccttgttttggttgaggatc 42604631  T
Q  160 gaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcga 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42604632 gaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcga 42604691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 60 - 221
Target Start/End: Original strand, 40703442 - 40703603
Alignment:
Q  60 aattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggacc 159  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||| || || || |||  | |||||||||||| || ||||||||||||||||||| |    
T  40703442 aattaggcattaaaaaccattacattaattcttcctcgtcacacaagtcaatcgggttgcacactacagtccctggggcaccttgttttggttgaggatc 40703541  T
Q  160 gaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaac 221  Q
    ||||||||||||||||  |||||||||||||||| ||||||||||||||| |||||||||||    
T  40703542 gaaatagcatgtcctcttgctcctcctcaacctctagtgattgtacaccgacaccttcgaac 40703603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 59 - 226
Target Start/End: Complemental strand, 18439418 - 18439251
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    |||||||||||||||||||||||||||||||||||||||||||| || || || || ||  || | || ||||||  || ||||||||||||||||||||    
T  18439418 caattaggcattaaaagccattacattcattcttcctcgtcacaaaagtcaatcgggtttcccacaactgtccctagggcaccttgttttggttgaggac 18439319  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    | |||||||||||||||||||||||||||||||| || |||||||||| |||||||||| ||||||||    
T  18439318 caaaatagcatgtcctcccgctcctcctcaacctggattgattgtacatcggcaccttcaaacccttc 18439251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 82 - 226
Target Start/End: Original strand, 44051535 - 44051679
Alignment:
Q  82 cattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctc 181  Q
    ||||||||| |||||||||||||| || || || ||  |||||||||||||| ||| ||| | ||||| ||||||||| |||||||||||||||||||||    
T  44051535 cattcattcatcctcgtcacacaagtcaatcgggtttcccgctacagtccctacggcaccctcttttgattgaggaccaaaatagcatgtcctcccgctc 44051634  T
Q  182 ctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    || ||||||||||||||||||||||||||||| ||||||||||||    
T  44051635 cttctcaacctcgagtgattgtacaccggcactttcgaacccttc 44051679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 86 - 226
Target Start/End: Original strand, 22550173 - 22550312
Alignment:
Q  86 cattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcc 185  Q
    ||||| |||||||||||||| || || || ||  ||||||| |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  22550173 cattcatcctcgtcacacaagtcaatcgggtttcccgctactgtccctgcggcaccttgttttggttgaggaccaaaatagcatgtcctcccgctcctcc 22550272  T
Q  186 tcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    |||||||| || |||||||||||||||| ||| ||||||||    
T  22550273 tcaacctc-agagattgtacaccggcacattcaaacccttc 22550312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 125 - 220
Target Start/End: Original strand, 26487612 - 26487707
Alignment:
Q  125 acagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaa 220  Q
    |||||||||| || ||||  |||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||||||    
T  26487612 acagtccctggggcacctgcttttggctgaggaccaaaatagcatgtcctcccgctcctcctcaacctcgaatgattatacaccagcaccttcgaa 26487707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 89 - 220
Target Start/End: Complemental strand, 38032994 - 38032863
Alignment:
Q  89 tcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctca 188  Q
    |||||||| |||||||| || ||||| |||||| | |||||||| | |  ||||  |||||| |||||||| |||||||||||||||||||||||||| |    
T  38032994 tcttcctcatcacacaagtcaattgggttgtcctcgacagtccccgggacacctgcttttggctgaggaccaaaatagcatgtcctcccgctcctcctta 38032895  T
Q  189 acctcgagtgattgtacaccggcaccttcgaa 220  Q
    ||||||| ||||| |||||| |||||||||||    
T  38032894 acctcgaatgattatacaccagcaccttcgaa 38032863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 89 - 226
Target Start/End: Complemental strand, 42168026 - 42167889
Alignment:
Q  89 tcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctca 188  Q
    |||||||| |||||||| || ||||| |||||| | |||||||| | || ||||  |||||| |||||||| ||||||||||||||||||||||||||||    
T  42168026 tcttcctcatcacacaagtcaattgggttgtcctcgacagtccccggggcacctgcttttggctgaggaccaaaatagcatgtcctcccgctcctcctca 42167927  T
Q  189 acctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    |||| ||  |||| |||||| |||||| |||| |||||    
T  42167926 accttgaacgattatacaccagcacctacgaatccttc 42167889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 38872351 - 38872403
Alignment:
Q  174 tcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||| ||||    
T  38872351 tcccgctcctcctcaacctggattgattgtacaccggcaccttcgaactcttc 38872403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 220
Target Start/End: Original strand, 10205599 - 10205674
Alignment:
Q  145 ttttggttgaggaccgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaa 220  Q
    |||||| | |||||| ||||| || ||||| ||||||||||||  ||| || ||||||||||||||||||||||||    
T  10205599 ttttgggtcaggaccaaaataacaagtccttccgctcctcctcggcctagaatgattgtacaccggcaccttcgaa 10205674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 201
Target Start/End: Complemental strand, 19241741 - 19241635
Alignment:
Q  95 tcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctcaacctcg 194  Q
    ||||||||||| || || || ||||||   |||||||||| || | ||  |||||| |||||||  |||||| ||||||||||||||||||||| ||| |    
T  19241741 tcgtcacacaagtcaatcgggttgtccttgacagtccctggggcaactgcttttgggtgaggacaaaaatagtatgtcctcccgctcctcctcacccttg 19241642  T
Q  195 agtgatt 201  Q
    | |||||    
T  19241641 aatgatt 19241635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 201
Target Start/End: Complemental strand, 19314925 - 19314819
Alignment:
Q  95 tcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctcaacctcg 194  Q
    ||||||||||| || || || ||||||   |||||||||| || | ||  |||||| |||||||  |||||| ||||||||||||||||||||| ||| |    
T  19314925 tcgtcacacaagtcaatcgggttgtccttgacagtccctggggcaactgcttttgggtgaggacaaaaatagtatgtcctcccgctcctcctcacccttg 19314826  T
Q  195 agtgatt 201  Q
    | |||||    
T  19314825 aatgatt 19314819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 144; Significance: 8e-76; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 59 - 222
Target Start/End: Complemental strand, 13634535 - 13634372
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  13634535 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcaatcggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 13634436  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacc 222  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||    
T  13634435 cgaaatagcatgtcctcccgctactcctcaacctcgagtgattgtacactggcaccttcaaacc 13634372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 59 - 226
Target Start/End: Original strand, 49428429 - 49428596
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| |  || ||| || ||||||||||||||||||||||||||||||||||||    
T  49428429 caattaggcattaaaagccattatattcattcttcctcgtcacacaaatcaaccgggttgcccactacagtccctgcggtaccttgttttggttgaggac 49428528  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49428529 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 49428596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 60 - 226
Target Start/End: Original strand, 48227602 - 48227768
Alignment:
Q  60 aattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggacc 159  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| || || ||| ||||||||||||||||||||||||||||||||||||||||    
T  48227602 aattaggctttaaaagccattacattcattcttcctcgtcacacaaatcaatcgggttgcccgctacagtccctgcggtaccttgttttggttgaggacc 48227701  T
Q  160 gaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
     ||||||||||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  48227702 aaaatagcatgtcctctcgctcctcctcaacctcgagcgattgtacatcggcaccttcgaacccttc 48227768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 59 - 225
Target Start/End: Complemental strand, 35525312 - 35525147
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || || || ||| |||||||| |||||| || ||||||||||||||||||||    
T  35525312 caattaggcattaaaagccattacattcattcttcctcgtcacacaagtcaatcgg-ttgcccgctacattccctggggcaccttgttttggttgaggac 35525214  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaaccctt 225  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  35525213 caaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcaaaccctt 35525147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 59 - 225
Target Start/End: Original strand, 18974401 - 18974567
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| || || || ||||||||||||||||||| || ||||||||||||||||||||    
T  18974401 caattaggcattaaaacccattacattcattcttcctcgtcacacaagtcaatcgggttgtccgctacagtccctggggcaccttgttttggttgaggac 18974500  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaaccctt 225  Q
    |||||||||||||||||||||||||||||||||  || || |||||||||||||| |||||||||||    
T  18974501 cgaaatagcatgtcctcccgctcctcctcaaccaggactgtttgtacaccggcactttcgaaccctt 18974567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 59 - 225
Target Start/End: Original strand, 29437024 - 29437189
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| || || || ||| ||||||||||||||| || ||||||||||||||||||||    
T  29437024 caattaggcattaaaagccattacattcattcttcttcgtcacacaagtcaatcgggttgcccgctacagtccctg-ggcaccttgttttggttgaggac 29437122  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaaccctt 225  Q
    | ||||| |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  29437123 caaaataacatgtcctcccgctcctcctcaacttcgagtgattgtacaccagcaccttcgaaccctt 29437189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 60 - 222
Target Start/End: Complemental strand, 49925564 - 49925402
Alignment:
Q  60 aattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggacc 159  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| || || || ||| ||||||||||||||  || |||||||||||||||||||||    
T  49925564 aattaggcattaaaaaccattacattcattcttcctcgtcacacaagtcaatcgggttgcccgctacagtccctaaggcaccttgttttggttgaggacc 49925465  T
Q  160 gaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacc 222  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  49925464 gaaataacatgtcctcccgctcctcgtcaacctcgagtgattgtacaccggcacattcgaacc 49925402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 60 - 221
Target Start/End: Complemental strand, 42570906 - 42570745
Alignment:
Q  60 aattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggacc 159  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| || || || ||| || |||||||||||| || |||||||||||||||||||||    
T  42570906 aattaggcattaaaagtcattacattcattcttcctcgtcacacaagtcaatcgggttgccctctacagtccctgaggcaccttgttttggttgaggacc 42570807  T
Q  160 gaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaac 221  Q
     ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  42570806 aaaatagcatgtcctcccgctcctcctcaacctcgactgattgtacgccggcaccttcgaac 42570745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 59 - 226
Target Start/End: Original strand, 41803316 - 41803483
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||| || || || ||| |||||||||||| || |  ||||||||||||||||||||    
T  41803316 caattaggccttaaaagccattacattcattcttccttgtcacacaagtcaatcgggttgcccgctacagtccttgggacaccttgttttggttgaggac 41803415  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    | ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  41803416 caaaataacatgtcctcccgctcctcctcaacctcgactgattgtacaccggcaccttcgaacccttc 41803483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 59 - 226
Target Start/End: Complemental strand, 27485838 - 27485672
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||| || || || || ||||||||||||| ||||| ||||||||||||||||||||    
T  27485838 caattaggcatttaaagccattacattcattcatcctcgtcacacaagtcaatcgggttttccgctacagtcc-tgcggcaccttgttttggttgaggac 27485740  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    | |||||||||||||||| |||||||||||||||||||||||||||||||   |||||||||||||||    
T  27485739 caaaatagcatgtcctcctgctcctcctcaacctcgagtgattgtacacctataccttcgaacccttc 27485672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 82 - 226
Target Start/End: Original strand, 51270916 - 51271060
Alignment:
Q  82 cattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctc 181  Q
    ||||||||| |||||||||||||| || || || ||  |||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  51270916 cattcattcatcctcgtcacacaagtcaatcgggtttcccgctacagtccctgcggcaccttgttttggttgaggaccaaaatagcatgtcctcccgctc 51271015  T
Q  182 ctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    |||||||||||||||||| ||||||||||||||||||||||||||    
T  51271016 ctcctcaacctcgagtgaatgtacaccggcaccttcgaacccttc 51271060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 59 - 225
Target Start/End: Original strand, 13974016 - 13974182
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||| |  || || ||| ||||||||||||||| || |||||||||||||||||||     
T  13974016 caattagacattaaaaaccattacattcattcttcctcgtcacacaagttaatcgggttgcccgctacagtccctggggcaccttgttttggttgaggaa 13974115  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaaccctt 225  Q
    | ||||||||||||||||  |||||||||||||| |||||||||||||||||||||||| |||||||    
T  13974116 caaaatagcatgtcctccatctcctcctcaacctggagtgattgtacaccggcaccttcaaaccctt 13974182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 59 - 221
Target Start/End: Original strand, 26494548 - 26494710
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||| || || || ||| |||||||||||||||  | ||||| ||||||||||||||    
T  26494548 caattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacagtccctggagcaccttcttttggttgaggac 26494647  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaac 221  Q
    | |||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||||    
T  26494648 caaaatagcatgtcctcccgctcctcctcaacttcgactgattgtacacctgcaccttcgaac 26494710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 60 - 226
Target Start/End: Original strand, 36910972 - 36911137
Alignment:
Q  60 aattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggacc 159  Q
    |||||||||||||||| | ||| ||||||||||||||||| ||||| || |  || ||| ||||||||||||||| || |||||||||||||||||||||    
T  36910972 aattaggcattaaaagtctttatattcattcttcctcgtcgcacaagtcaaccgggttg-ccgctacagtccctggggcaccttgttttggttgaggacc 36911070  T
Q  160 gaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
     ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  36911071 aaaatagcatgtcctcccgctccttctcaacctcgactgattgtacaccggcaccttcgaacccttc 36911137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 75 - 225
Target Start/End: Complemental strand, 46142555 - 46142405
Alignment:
Q  75 gccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcct 174  Q
    |||||||||||||||||||||| |||||||| || || || ||| ||||||||||||| | || ||||||||||||||||||||| ||||||||||||||    
T  46142555 gccattacattcattcttcctcatcacacaagtcaatcgggttgcccgctacagtcccaggggcaccttgttttggttgaggaccaaaatagcatgtcct 46142456  T
Q  175 cccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaaccctt 225  Q
    ||||||||||||||||||  | |||||||||||||||||||||||||||||    
T  46142455 cccgctcctcctcaacctgaactgattgtacaccggcaccttcgaaccctt 46142405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 59 - 226
Target Start/End: Complemental strand, 24363183 - 24363016
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| || ||  | ||| || ||||||||||||  | ||||| ||||||||||||||    
T  24363183 caattaggcattagaagccattacattcattcttcctcgtcacacaagtcaatcaggttgcccactacagtccctggagcaccttcttttggttgaggac 24363084  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    | ||||||||| ||||||| ||||||||||||| ||| ||||||||||||||||||||||||| ||||    
T  24363083 caaaatagcatatcctcccactcctcctcaaccccgactgattgtacaccggcaccttcgaacgcttc 24363016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 82 - 226
Target Start/End: Complemental strand, 29761273 - 29761130
Alignment:
Q  82 cattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctc 181  Q
    ||||||||| ||||||||||||||  | || ||  |  |||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  29761273 cattcattcatcctcgtcacacaagccaatcgggattcccgctacagtccctgcggcaccttgttttggttgaggaccaaaatagcatgtcctcccgctc 29761174  T
Q  182 ctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    ||||||||||||||||||||||||| |||||||||||||||||||    
T  29761173 ctcctcaacctcgagtgattgtaca-cggcaccttcgaacccttc 29761130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 59 - 214
Target Start/End: Original strand, 49397736 - 49397891
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| || || || ||| |||||||||||| || || ||| ||||||||| || |||    
T  49397736 caattaggcattaaaagccattacattcattcttcatcgtcacacaagtcaatcgggttgcccgctacagtccttggggcaccgtgttttggtcgatgac 49397835  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcacc 214  Q
    | |||||| |||||||||||||| ||||||||||||| ||||||||||||||||||    
T  49397836 caaaatagtatgtcctcccgctcatcctcaacctcgactgattgtacaccggcacc 49397891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 120 - 226
Target Start/End: Complemental strand, 44336973 - 44336867
Alignment:
Q  120 ccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcga 219  Q
    |||||||||||||||||| |||||| |||||||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  44336973 ccgctacagtccctgcggcaccttgatttggttgaggaccaaaatagcatgtcctcccgcttctcttcaacctcgagtgattgtacaccggcaccttcga 44336874  T
Q  220 acccttc 226  Q
    |||||||    
T  44336873 acccttc 44336867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 59 - 222
Target Start/End: Original strand, 6436803 - 6436973
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgt-------cacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggt 151  Q
    ||||||||||||||||||||||||||||||||||||||||       ||||||| || || || ||| |||||||| |||||| || ||| |||||||||    
T  6436803 caattaggcattaaaagccattacattcattcttcctcgtcagtcgtcacacaagtcaatcgggttgcccgctacaatccctggggcaccatgttttggt 6436902  T
Q  152 tgaggaccgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacc 222  Q
    |||||||| |||||||||||||||||||||||||||||  | || | ||||||||||||||| ||||||||    
T  6436903 tgaggaccaaaatagcatgtcctcccgctcctcctcaatttggactaattgtacaccggcacattcgaacc 6436973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 139 - 226
Target Start/End: Complemental strand, 26634244 - 26634157
Alignment:
Q  139 accttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  26634244 accttgttttggttgaggaccaaaatagcatgtcctcccgctcctcctcaacctcgactgattgtacaccggcaccttcgaacccttc 26634157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 139 - 226
Target Start/End: Complemental strand, 14172796 - 14172709
Alignment:
Q  139 accttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  14172796 accttcttttggttgaggaccaaaatagcatgtcctcccgctcctcctcaacctcgactgattgtacaccggcaccttcgaacccttc 14172709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 89 - 226
Target Start/End: Complemental strand, 15355874 - 15355737
Alignment:
Q  89 tcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctca 188  Q
    |||||||| |||||||| || ||||| |||||| | | |||||||| |||||||  |||||| |||||||| ||||||||||||||||||||||||||||    
T  15355874 tcttcctcatcacacaagtcaattgggttgtcctcgatagtccctggggtacctgcttttggctgaggaccaaaatagcatgtcctcccgctcctcctca 15355775  T
Q  189 acctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    ||||||| ||||| |||||| ||||||||||| |||||    
T  15355774 acctcgaatgattatacaccagcaccttcgaatccttc 15355737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 89 - 226
Target Start/End: Complemental strand, 35585992 - 35585855
Alignment:
Q  89 tcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctca 188  Q
    |||||||| |||||||| || ||||| |||||| | |||||||||| || ||||  |||||| |||||||| ||||||||||||||||||||||||||||    
T  35585992 tcttcctcatcacacaagtcaattgggttgtcctcgacagtccctggggcacctgcttttggctgaggaccaaaatagcatgtcctcccgctcctcctca 35585893  T
Q  189 acctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    ||||||| ||||| |||||| ||||||||||| |||||    
T  35585892 acctcgaatgattatacaccagcaccttcgaatccttc 35585855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 89 - 217
Target Start/End: Original strand, 23343637 - 23343765
Alignment:
Q  89 tcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctca 188  Q
    |||||||| |||||||| || ||||| |||||| | ||| |||||| || ||||  ||||||||||||||| ||||||||||||||||||||||||||||    
T  23343637 tcttcctcatcacacaagtcaattgggttgtcctcgacaatccctggggcacctgcttttggttgaggaccaaaatagcatgtcctcccgctcctcctca 23343736  T
Q  189 acctcgagtgattgtacaccggcaccttc 217  Q
    ||||||| ||||| |||||| ||||||||    
T  23343737 acctcgaatgattatacaccagcaccttc 23343765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 89 - 226
Target Start/End: Original strand, 37779266 - 37779403
Alignment:
Q  89 tcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctca 188  Q
    |||||||| |||||||| || ||||| |||||| | |||||||||| || ||||  |||||| |||||||| ||||||||||||||||| ||||||||||    
T  37779266 tcttcctcatcacacaagtcaattgggttgtcctcgacagtccctggggcacctgcttttggctgaggaccaaaatagcatgtcctcccactcctcctca 37779365  T
Q  189 acctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    ||||||| ||||| |||||| |||| |||||| |||||    
T  37779366 acctcgaatgattatacaccagcactttcgaatccttc 37779403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 89 - 226
Target Start/End: Complemental strand, 49260769 - 49260632
Alignment:
Q  89 tcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctca 188  Q
    |||||||| |||||||| || ||||| |||||| | |||||||||| |||||||  |||||| |||||||| |||||||||||||| |||||| ||||||    
T  49260769 tcttcctcatcacacaagtcaattgggttgtcctcgacagtccctggggtacctgcttttggctgaggaccaaaatagcatgtccttccgctcatcctca 49260670  T
Q  189 acctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    ||||||| | ||| |||||| ||||||||||| |||||    
T  49260669 acctcgaatcattatacaccagcaccttcgaatccttc 49260632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 89 - 226
Target Start/End: Complemental strand, 38044294 - 38044157
Alignment:
Q  89 tcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctca 188  Q
    |||||||| |||||||  || ||||| |||||  | |||||||||| || ||||  ||||||||||||||  ||||||||||||||||||||||||||||    
T  38044294 tcttcctcatcacacaggtcaattgggttgtcgtcgacagtccctgaggcacctgcttttggttgaggacaaaaatagcatgtcctcccgctcctcctca 38044195  T
Q  189 acctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    ||||||| ||||| ||||||  |||||||||| |||||    
T  38044194 acctcgaatgattatacaccaacaccttcgaatccttc 38044157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 59 - 226
Target Start/End: Complemental strand, 16531313 - 16531143
Alignment:
Q  59 caattaggcattaaaagccattacattcatt---cttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgag 155  Q
    ||||||||||||| ||||| ||||||||| |   ||||||||||||  || || ||||| |||||| | ||||||| || || ||||  |||||||||||    
T  16531313 caattaggcattacaagccgttacattcaattatcttcctcgtcactgaactcaattgggttgtcctcgacagtccttggggcacctgcttttggttgag 16531214  T
Q  156 gaccgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    || | ||||||||||||||||| |||||||||| ||| || | ||||||||||||||||||| || |||||    
T  16531213 gatcaaaatagcatgtcctcccactcctcctcagcctagaataattgtacaccggcaccttcaaatccttc 16531143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 89 - 226
Target Start/End: Complemental strand, 39856333 - 39856196
Alignment:
Q  89 tcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctca 188  Q
    |||||||| |||||||| || ||||| || ||  | |||||||||| || ||||  |||||| |||||||| |||||||||||||||| |||||||||||    
T  39856333 tcttcctcatcacacaagtcaattgggttttcttcgacagtccctggggcacctgcttttggctgaggaccaaaatagcatgtcctcctgctcctcctca 39856234  T
Q  189 acctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    ||||||| ||||| ||||||  |||||||||| |||||    
T  39856233 acctcgaatgattatacaccaacaccttcgaatccttc 39856196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 89 - 226
Target Start/End: Complemental strand, 17685419 - 17685282
Alignment:
Q  89 tcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctca 188  Q
    |||||||| |||||||| || ||||| |||| | | |||||||||  || ||||  |||||| |||||||| ||||||||||||||||||||||||||||    
T  17685419 tcttcctcatcacacaagtcaattgggttgtactcgacagtccctagggcacctgcttttggctgaggaccaaaatagcatgtcctcccgctcctcctca 17685320  T
Q  189 acctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    ||||||| ||||  |||||| |||| || ||| |||||    
T  17685319 acctcgaatgatcatacaccagcacttttgaatccttc 17685282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 89 - 226
Target Start/End: Original strand, 35186121 - 35186258
Alignment:
Q  89 tcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctca 188  Q
    |||||||| | |||||| || ||||| |||||| | |||||||||| || || |  |||||| |||| ||| ||||||||||| ||||||||||||||||    
T  35186121 tcttcctcatgacacaagtcaattgggttgtcctcgacagtccctggggcacttgcttttggctgagaaccaaaatagcatgttctcccgctcctcctca 35186220  T
Q  189 acctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    ||||||| ||||| ||||||  |||||||||| |||||    
T  35186221 acctcgaatgattatacaccaccaccttcgaatccttc 35186258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 89 - 220
Target Start/End: Complemental strand, 24269457 - 24269327
Alignment:
Q  89 tcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctca 188  Q
    |||||||| |||||||| || ||||   ||||| | |||||||||  || ||||  ||||||  ||||||| ||||||||||||||||||||||||||||    
T  24269457 tcttcctcatcacacaagtcaattgagctgtcctcgacagtccctagggcacctgcttttggccgaggaccaaaatagcatgtcctcccgctcctcctca 24269358  T
Q  189 acctcgagtgattgtacaccggcaccttcgaa 220  Q
    ||||||| ||| | |||||| |||||||||||    
T  24269357 acctcgaatga-tatacaccagcaccttcgaa 24269327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 62 - 184
Target Start/End: Original strand, 13284550 - 13284675
Alignment:
Q  62 ttaggcattaaaagccattacattcattc---ttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    |||||||||| || |||||||||||||||   |||||| ||||||||||| || || ||| ||||||||||||||  || || |  ||||  ||||||||    
T  13284550 ttaggcattagaaaccattacattcattcatcttcctcatcacacaaatcaatcgggttgcccgctacagtcccttgggcacttgcttttcattgaggac 13284649  T
Q  159 cgaaatagcatgtcctcccgctcctc 184  Q
    | ||||||||||||||| ||||||||    
T  13284650 caaaatagcatgtcctctcgctcctc 13284675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 95 - 226
Target Start/End: Complemental strand, 12790354 - 12790226
Alignment:
Q  95 tcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctcaacctcg 194  Q
    |||||||||||  | || || |||||| | |||||||||| || ||||  |||||| |||||||| |||||||||||||||||    |||||||||||||    
T  12790354 tcgtcacacaaggcaatcgggttgtcctcgacagtccctggggcacctgcttttggctgaggaccaaaatagcatgtcctccc---actcctcaacctcg 12790258  T
Q  195 agtgattgtacaccggcaccttcgaacccttc 226  Q
    | ||||| |||||| |||||||| || |||||    
T  12790257 aatgattatacaccagcaccttcaaatccttc 12790226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 208
Target Start/End: Complemental strand, 40532461 - 40532348
Alignment:
Q  95 tcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctcaacctcg 194  Q
    ||||||||||| || || |  |||||| | || ||||||| || ||||  |||||| |||||||  |||||||||||||||||||||||||||||| ||     
T  40532461 tcgtcacacaagtcaatcgagttgtcctcgacggtccctgaggcacctgcttttggctgaggacaaaaatagcatgtcctcccgctcctcctcaacttca 40532362  T
Q  195 agtgattgtacacc 208  Q
    | ||||| ||||||    
T  40532361 aatgattatacacc 40532348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 188
Target Start/End: Complemental strand, 14771861 - 14771762
Alignment:
Q  89 tcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctca 188  Q
    ||||||||||||||||| || ||||| || ||| | | | ||| || || ||||  ||||||||||| ||| ||||| ||||||||||||||||||||||    
T  14771861 tcttcctcgtcacacaagtcaattgggttatcctcgatattccttggggcacctgcttttggttgagaaccaaaatatcatgtcctcccgctcctcctca 14771762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 178
Target Start/End: Complemental strand, 31451543 - 31451454
Alignment:
Q  89 tcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccg 178  Q
    ||||||| ||||||||| || ||||| |||||| | |||||||| | || || |  ||||||||||||||| ||||||||||||| ||||    
T  31451543 tcttccttgtcacacaagtcaattgggttgtcctcaacagtccccggggcacttgcttttggttgaggaccaaaatagcatgtccacccg 31451454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 59 - 226
Target Start/End: Complemental strand, 5961 - 5794
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||||    
T  5961 caattaggcattaaaagccattactgtcattcttcctcgtcacacaaatcaatcggcttgtccgctacagtccctgcggtaccttcttttggttgaggac 5862  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  5861 ctaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacactggcaccttcgaacccttc 5794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 116; Significance: 4e-59; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 59 - 226
Target Start/End: Original strand, 2866 - 3033
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||| || || || ||  ||||||||||||||| || ||||||||||||||||||||    
T  2866 caattaggcattaaaagtcattacattcattcctcctcgtcacacaagtcaatcgggtttcccgctacagtccctgtggcaccttgttttggttgaggac 2965  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    | |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  2966 caaaatagcatgtcatcccgctcctcctcaacctcgagtgattgtactccggcaccttcgaacccttc 3033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 104; Significance: 6e-52; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 59 - 218
Target Start/End: Complemental strand, 4678 - 4519
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggac 158  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| || || |  ||| |||||||||||| || || |||||||||| |||||||||    
T  4678 caattaggcattaaaagccattacattcattattcctcgtcacacaagtcaatcgagttgcccgctacagtccatggggcaccttgtttttgttgaggac 4579  T
Q  159 cgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcg 218  Q
    |||||||||||||||||||||| ||||||||||| || ||||||||||||||||||||||    
T  4578 cgaaatagcatgtcctcccgctgctcctcaacctggactgattgtacaccggcaccttcg 4519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 89 - 226
Target Start/End: Original strand, 1456 - 1593
Alignment:
Q  89 tcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctca 188  Q
    ||||||||||||||||| || ||||| |||||| | |||||||||| || ||||| |||||||||||||  |||||||||||| | ||||||||||||||    
T  1456 tcttcctcgtcacacaagtcaattgggttgtcctcgacagtccctgaggcaccttcttttggttgaggatagaaatagcatgttcacccgctcctcctca 1555  T
Q  189 acctcgagtgattgtacaccggcaccttcgaacccttc 226  Q
    ||||||| ||||| ||||||||||||||| || |||||    
T  1556 acctcgattgattatacaccggcaccttcaaatccttc 1593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 89 - 207
Target Start/End: Original strand, 5420 - 5538
Alignment:
Q  89 tcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctca 188  Q
    |||||||| |||||||| || ||||| |||||| | |||||||||| || |||| ||||||| |||||||| ||||||||||||||||| |||||||| |    
T  5420 tcttcctcatcacacaagtcaattgggttgtcctcgacagtccctggggcacctggttttggctgaggaccaaaatagcatgtcctcccactcctcctta 5519  T
Q  189 acctcgagtgattgtacac 207  Q
    ||||||| ||||| |||||    
T  5520 acctcgaatgattatacac 5538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 186
Target Start/End: Original strand, 9577 - 9707
Alignment:
Q  59 caattaggcattaaaagccattacattcattc---ttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggttgag 155  Q
    ||||||| ||||| ||||||||||||| | ||   |||||| ||||| || || ||||| |||||| | | |||||||  || || |  |||||||||||    
T  9577 caattagacattacaagccattacatttaatcatcttcctcttcacataagtcaattgggttgtcctcgatagtccctagggcacatgattttggttgag 9676  T
Q  156 gaccgaaatagcatgtcctcccgctcctcct 186  Q
    |||| ||||| |||||||| |||||||||||    
T  9677 gaccaaaataacatgtccttccgctcctcct 9707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0500 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 220
Target Start/End: Complemental strand, 1646 - 1571
Alignment:
Q  145 ttttggttgaggaccgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaa 220  Q
    |||| |||||||||  ||||| || ||||| |||||||||||||  || || |||||||||| |||||||||||||    
T  1646 ttttagttgaggactaaaataacaagtccttccgctcctcctcagtctggactgattgtacatcggcaccttcgaa 1571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 97
Target Start/End: Complemental strand, 17075 - 17037
Alignment:
Q  59 caattaggcattaaaagccattacattcattcttcctcg 97  Q
    |||||||||||||||||| |||||| |||||||||||||    
T  17075 caattaggcattaaaagctattacagtcattcttcctcg 17037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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