View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21087_low_62 (Length: 238)
Name: NF21087_low_62
Description: NF21087
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21087_low_62 |
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Alignment Details
Target: chr7 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 4 - 220
Target Start/End: Complemental strand, 7546826 - 7546610
Alignment:
| Q |
4 |
ttaattttgcaaagtcgtaatcaattgaaagaatgcatcagtcttgcatgattggatgtgttttactcatagtttaagtatggttatttttcaatttctt |
103 |
Q |
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| T |
7546826 |
ttaattttgcaaagtcgtaatcaattgaaagaatgcatcagtcttgcatgattggatgtgttttactcatagtttaagtatggttatttttcaatttctt |
7546727 |
T |
|
| Q |
104 |
ttttcttaaccaatgattctgggtctccatttcatttatagtaaattacactccctccgcttagagatactcattttacactacctagcctcctcccttg |
203 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| |
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| T |
7546726 |
ttttcttaaccaatgattctgggtctccatttcatttatagtaaattacactccctcctcttagagatactcattttacactacttagcctcctcccttg |
7546627 |
T |
|
| Q |
204 |
tgttaaaatatacaccc |
220 |
Q |
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||||||||||||||||| |
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| T |
7546626 |
tgttaaaatatacaccc |
7546610 |
T |
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