View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21087_low_72 (Length: 213)
Name: NF21087_low_72
Description: NF21087
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21087_low_72 |
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Alignment Details
Target: chr5 (Bit Score: 171; Significance: 5e-92; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 171; E-Value: 5e-92
Query Start/End: Original strand, 20 - 198
Target Start/End: Original strand, 3186551 - 3186729
Alignment:
| Q |
20 |
ctgtgtatgctatacaaatatcacagaaagtatacacatatcaaaccaatggtgttccagagtgagaataatgacttcattgcctttaactagtggaaga |
119 |
Q |
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| T |
3186551 |
ctgtgtatgctatacaaatatcacagaaagtatacacatatcaaaccaatggtgttccagagtgagaataatgacttcattgcctttaactagtggaaga |
3186650 |
T |
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| Q |
120 |
ccttacagtttcttgacttgataaatcagtcatgctaccatccacatgtaaatagtttctataccaatggtgaactaat |
198 |
Q |
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||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |
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| T |
3186651 |
ccttacagtttcttgacttgataaatcagtcatgctatcttccacatgtaaatagtttctataccaatggtgaactaat |
3186729 |
T |
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