View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2108_high_10 (Length: 267)
Name: NF2108_high_10
Description: NF2108
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2108_high_10 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 30 - 267
Target Start/End: Original strand, 6887735 - 6887972
Alignment:
| Q |
30 |
ggtgaaagagtgaagtgaagcttatggatttgagtgatagaataattacaaaggaaaagggaatcaatgttgggatgtatctgactttatgcggatgtga |
129 |
Q |
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| T |
6887735 |
ggtgaaagagtgaagtgaagcttatggatttgagtgatagaataattacaaaggaaaagggaatcaatgttgggatgtatctgactttatgcggatgtga |
6887834 |
T |
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| Q |
130 |
aaagctcaatcagtgatttcttgagttagtttattttctgtctgatagaatgtcagtgaagtagtggatagggaaatgagctatctcactttattccatg |
229 |
Q |
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| T |
6887835 |
aaagctcaatcagtgatttcttgagttagtttattttctgtctgatagaatgtcagtgaagtagtggatagggaaatgagctatctcactttattccatg |
6887934 |
T |
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| Q |
230 |
caatcaacaatttctcgcattcacgcagtctagacatc |
267 |
Q |
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| T |
6887935 |
caatcaacaatttctcgcattcacgcagtttagacatc |
6887972 |
T |
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