View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2108_high_12 (Length: 264)
Name: NF2108_high_12
Description: NF2108
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2108_high_12 |
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Alignment Details
Target: chr1 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 20 - 249
Target Start/End: Complemental strand, 11953134 - 11952905
Alignment:
| Q |
20 |
aaccgcgtggcagtgcgcagttggaactgatgcgtctgagactaaacagcacagcgcggaggaaggacagcgactctgagtgatatgcgcagaaacgaca |
119 |
Q |
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| T |
11953134 |
aaccgcgtggcaatgcgcaggtggaactgatgcgtctgggactaaacggcacagcacggaggaaggacagcgactctgagtgatatgcgcagaaaggaca |
11953035 |
T |
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| Q |
120 |
gagtagagaatagattagggttccatgctggtagaggaaacaggaaacaattttacgactagggttcagatcttgtatagttttttgttatagttctcaa |
219 |
Q |
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||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
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| T |
11953034 |
gagtagagaatggattagggttccatgctggtagaggaaacaggaaacaattttacgactagggttcagatcttgtatagttttttgttatagttctcga |
11952935 |
T |
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| Q |
220 |
aaaagggctgggttgggaattcggaacaat |
249 |
Q |
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| T |
11952934 |
aaatgggctcggttgggaattgggaacaat |
11952905 |
T |
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