View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2108_low_19 (Length: 238)
Name: NF2108_low_19
Description: NF2108
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2108_low_19 |
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Alignment Details
Target: chr2 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 12 - 219
Target Start/End: Original strand, 35403348 - 35403555
Alignment:
| Q |
12 |
tgagaagaaagagtcatcaaatttcctaaagctaaagttaagtcgagattcagaaagtgatcaagaaaccaatacgatactttctctttcattgttctct |
111 |
Q |
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| T |
35403348 |
tgagaagaaagagtcatcaaatttcctaaaactaaagttaagtcgagattcagaaagtgatcaagaaaccaatacgatactttctctttcattattctct |
35403447 |
T |
|
| Q |
112 |
tcatcctccaaatcaaagtgatgagaaacaatattagtgaaaaacacacataaaagacccatgttgagcacatttatgtcatttgggctgagtacttaag |
211 |
Q |
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||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35403448 |
tcatcctccaattcaaagtgatgagaaacaatattagtgaaaaacacacataaaagacccatgttgagcacatttatgtcatttgggctgagtacttaag |
35403547 |
T |
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| Q |
212 |
atctgacc |
219 |
Q |
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|||||||| |
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| T |
35403548 |
atctgacc |
35403555 |
T |
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