View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21092_low_3 (Length: 398)

Name: NF21092_low_3
Description: NF21092
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21092_low_3
NF21092_low_3
[»] chr4 (34 HSPs)
chr4 (16-310)||(34646365-34646649)
chr4 (331-380)||(50002494-50002542)
chr4 (306-378)||(25483406-25483479)
chr4 (331-378)||(36608701-36608747)
chr4 (306-380)||(19504764-19504839)
chr4 (306-380)||(36629305-36629380)
chr4 (307-380)||(1731661-1731735)
chr4 (306-359)||(39792873-39792928)
chr4 (295-359)||(54343010-54343076)
chr4 (306-380)||(3340875-3340950)
chr4 (306-380)||(41370425-41370500)
chr4 (331-380)||(50630795-50630843)
chr4 (331-380)||(54936264-54936312)
chr4 (331-380)||(55933164-55933212)
chr4 (306-359)||(4390114-4390169)
chr4 (306-359)||(10246007-10246062)
chr4 (307-380)||(22028383-22028457)
chr4 (306-359)||(23817694-23817749)
chr4 (306-359)||(39404106-39404161)
chr4 (307-359)||(54108625-54108679)
chr4 (312-379)||(44620422-44620490)
chr4 (306-369)||(44621081-44621145)
chr4 (331-369)||(45496884-45496921)
chr4 (306-377)||(50459792-50459864)
chr4 (331-380)||(54108981-54109028)
chr4 (331-380)||(11197294-11197342)
chr4 (331-380)||(18932789-18932837)
chr4 (331-380)||(36572087-36572135)
chr4 (335-380)||(49302974-49303018)
chr4 (306-380)||(54017608-54017683)
chr4 (306-359)||(32941136-32941191)
chr4 (331-359)||(34646689-34646717)
chr4 (306-359)||(39404486-39404541)
chr4 (306-359)||(49076844-49076899)
[»] chr7 (26 HSPs)
chr7 (306-380)||(11845259-11845334)
chr7 (306-380)||(37533379-37533454)
chr7 (308-379)||(14681579-14681649)
chr7 (306-378)||(37167851-37167924)
chr7 (306-377)||(19122802-19122874)
chr7 (295-380)||(30245145-30245227)
chr7 (295-380)||(30253560-30253642)
chr7 (306-380)||(7517648-7517723)
chr7 (331-380)||(29157633-29157681)
chr7 (306-359)||(37532766-37532821)
chr7 (296-380)||(36939738-36939823)
chr7 (331-377)||(34218076-34218121)
chr7 (306-380)||(1085631-1085706)
chr7 (295-377)||(30244341-30244424)
chr7 (306-380)||(40094789-40094864)
chr7 (306-359)||(45754803-45754858)
chr7 (331-378)||(9901713-9901759)
chr7 (331-380)||(23419-23467)
chr7 (331-380)||(6054628-6054676)
chr7 (331-380)||(21416183-21416231)
chr7 (335-380)||(21619091-21619135)
chr7 (331-359)||(7554113-7554141)
chr7 (331-379)||(23569044-23569091)
chr7 (306-355)||(45433333-45433384)
chr7 (306-359)||(45434724-45434779)
chr7 (331-359)||(47129457-47129485)
[»] chr5 (21 HSPs)
chr5 (306-359)||(42405613-42405666)
chr5 (331-380)||(35150074-35150122)
chr5 (306-380)||(41170702-41170777)
chr5 (295-380)||(32487461-32487547)
chr5 (306-380)||(12662667-12662742)
chr5 (306-380)||(18603135-18603210)
chr5 (331-380)||(26074680-26074728)
chr5 (306-380)||(40296330-40296405)
chr5 (306-359)||(6500538-6500593)
chr5 (333-380)||(13112605-13112651)
chr5 (306-358)||(36492232-36492286)
chr5 (306-380)||(36568584-36568657)
chr5 (331-380)||(9498696-9498744)
chr5 (331-380)||(13042607-13042655)
chr5 (331-380)||(15370167-15370215)
chr5 (331-380)||(26074188-26074236)
chr5 (306-380)||(34753040-34753115)
chr5 (331-376)||(36522279-36522323)
chr5 (306-359)||(13415775-13415830)
chr5 (331-359)||(25328023-25328051)
chr5 (331-359)||(26900059-26900087)
[»] chr2 (15 HSPs)
chr2 (306-380)||(962666-962741)
chr2 (307-380)||(36178621-36178695)
chr2 (306-380)||(15511510-15511585)
chr2 (310-380)||(28254258-28254327)
chr2 (295-366)||(40163376-40163449)
chr2 (306-380)||(6421799-6421874)
chr2 (306-380)||(6422178-6422253)
chr2 (306-380)||(36178186-36178261)
chr2 (306-359)||(5367543-5367598)
chr2 (331-361)||(6421712-6421742)
chr2 (331-380)||(14745336-14745384)
chr2 (331-380)||(14745709-14745757)
chr2 (331-380)||(15880331-15880379)
chr2 (306-380)||(37106256-37106331)
chr2 (306-355)||(5543013-5543064)
[»] chr1 (22 HSPs)
chr1 (306-380)||(41157059-41157134)
chr1 (308-378)||(41759553-41759624)
chr1 (331-380)||(14318935-14318983)
chr1 (331-380)||(17294645-17294693)
chr1 (306-380)||(26661537-26661612)
chr1 (331-380)||(32594758-32594806)
chr1 (306-380)||(41157443-41157518)
chr1 (331-380)||(44043814-44043862)
chr1 (306-359)||(37555817-37555872)
chr1 (306-359)||(37556199-37556254)
chr1 (331-377)||(3550791-3550836)
chr1 (306-380)||(44290839-44290915)
chr1 (306-376)||(3537614-3537685)
chr1 (331-380)||(26661940-26661988)
chr1 (306-380)||(32168713-32168788)
chr1 (331-380)||(34364993-34365041)
chr1 (331-380)||(39066242-39066290)
chr1 (306-380)||(41142440-41142516)
chr1 (306-380)||(44290473-44290548)
chr1 (331-380)||(50052065-50052113)
chr1 (331-359)||(11977032-11977060)
chr1 (306-359)||(38804370-38804425)
[»] chr3 (35 HSPs)
chr3 (307-380)||(42342404-42342478)
chr3 (331-380)||(12114604-12114652)
chr3 (331-380)||(39389138-39389186)
chr3 (306-359)||(54018213-54018268)
chr3 (308-380)||(52634743-52634816)
chr3 (306-380)||(22303970-22304045)
chr3 (331-380)||(29644623-29644671)
chr3 (331-380)||(29644944-29644992)
chr3 (306-380)||(41359780-41359855)
chr3 (306-359)||(37990654-37990709)
chr3 (306-359)||(37990992-37991047)
chr3 (297-378)||(39934961-39935043)
chr3 (307-380)||(43346807-43346881)
chr3 (330-378)||(54017589-54017636)
chr3 (331-378)||(45395695-45395741)
chr3 (306-377)||(32462915-32462987)
chr3 (306-380)||(15772922-15772997)
chr3 (306-359)||(21832360-21832413)
chr3 (335-380)||(22303705-22303749)
chr3 (331-380)||(22304637-22304685)
chr3 (295-377)||(25755465-25755548)
chr3 (306-380)||(32589771-32589846)
chr3 (306-380)||(35946590-35946665)
chr3 (331-380)||(49336729-49336777)
chr3 (306-379)||(3135469-3135543)
chr3 (295-359)||(7766787-7766851)
chr3 (331-359)||(8327992-8328020)
chr3 (331-359)||(11661608-11661636)
chr3 (306-377)||(11662022-11662094)
chr3 (331-359)||(31190097-31190125)
chr3 (331-359)||(39336012-39336040)
chr3 (306-359)||(42342105-42342160)
chr3 (331-359)||(53596048-53596076)
chr3 (331-359)||(53596363-53596391)
chr3 (331-359)||(54017858-54017886)
[»] chr6 (23 HSPs)
chr6 (306-381)||(1846815-1846891)
chr6 (306-359)||(14748357-14748408)
chr6 (306-380)||(2377822-2377897)
chr6 (306-380)||(2578458-2578533)
chr6 (306-380)||(3409327-3409402)
chr6 (306-380)||(29518571-29518646)
chr6 (306-380)||(29518988-29519063)
chr6 (306-380)||(32741247-32741322)
chr6 (331-378)||(3058296-3058342)
chr6 (331-377)||(16107749-16107794)
chr6 (313-359)||(2578857-2578905)
chr6 (331-380)||(3415526-3415574)
chr6 (331-380)||(10074033-10074081)
chr6 (331-380)||(10074405-10074453)
chr6 (331-380)||(11637763-11637811)
chr6 (306-380)||(16454975-16455050)
chr6 (335-380)||(21130103-21130147)
chr6 (335-380)||(35210272-35210316)
chr6 (306-359)||(2579887-2579942)
chr6 (306-359)||(2843643-2843698)
chr6 (306-355)||(3409752-3409803)
chr6 (306-359)||(12071706-12071761)
chr6 (306-359)||(12085049-12085104)
[»] chr8 (24 HSPs)
chr8 (306-380)||(3038305-3038380)
chr8 (331-380)||(9483229-9483277)
chr8 (297-359)||(34834964-34835028)
chr8 (306-379)||(30441154-30441228)
chr8 (295-359)||(3669775-3669841)
chr8 (306-380)||(5915935-5916010)
chr8 (331-380)||(6651562-6651610)
chr8 (306-380)||(34835277-34835352)
chr8 (306-380)||(34835543-34835618)
chr8 (306-380)||(34835809-34835884)
chr8 (306-380)||(37544505-37544580)
chr8 (307-380)||(147888-147962)
chr8 (295-356)||(1014249-1014312)
chr8 (306-359)||(3670148-3670203)
chr8 (308-359)||(4154685-4154736)
chr8 (308-380)||(40518139-40518212)
chr8 (306-357)||(6876877-6876930)
chr8 (331-380)||(6731963-6732011)
chr8 (331-380)||(30359339-30359387)
chr8 (331-380)||(45122099-45122147)
chr8 (306-380)||(45122692-45122767)
chr8 (310-359)||(8919163-8919214)
chr8 (307-380)||(40518650-40518724)
chr8 (306-355)||(40579284-40579335)
[»] scaffold0734 (1 HSPs)
scaffold0734 (331-368)||(5476-5513)
[»] scaffold0702 (1 HSPs)
scaffold0702 (306-380)||(529-604)
[»] scaffold0391 (1 HSPs)
scaffold0391 (331-380)||(1733-1781)


Alignment Details
Target: chr4 (Bit Score: 137; Significance: 2e-71; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 16 - 310
Target Start/End: Original strand, 34646365 - 34646649
Alignment:
Q  16 atatggtcagagagctaccatagatcaaatatccatatcaactctatgaagaatgtttacttggaaagcaattcaggacgaagttttccaaag-agtcaa 114  Q
    |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||    
T  34646365 atatggtcagagagctaccataaatcaaatatccatatcaactttatgaagaatgtttacttggaaagcaattcaggacg-agtttttcaaagtagtcaa 34646463  T
Q  115 gttcaaaagcaaagaagtcgctcaagcttatacatgttaatgtttatgttaatgtttgtgggtcaatcaagccaaact--ctacgtaaaaatcacaattt 212  Q
    ||||||||||||||||||||||| |||||||||            |||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  34646464 gttcaaaagcaaagaagtcgctcgagcttatac------------atgttaatgtttgtgggtcaatcaagccaaactcactacgtaaaaatcacaattt 34646551  T
Q  213 tctctttttcgttgatga--nnnnnnnnnnnnnnnnnnntgcatgggtctatttcttgatgctgaaataaaaagtctttactctaccatcaacaacgagg 310  Q
    ||||||||||||||||||                     |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  34646552 tctctttttcgttgatgatttttttaaaaaaaataaaaatgcatgggtctatttcttgatgctgaaataaaaagtcttta--ctaccatcaacaacgagg 34646649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 331 - 380
Target Start/End: Complemental strand, 50002542 - 50002494
Alignment:
Q  331 agagacaccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  50002542 agagacaccacactcttacccaaaacc-ttaagacaatggatttatgggt 50002494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 306 - 378
Target Start/End: Complemental strand, 25483479 - 25483406
Alignment:
Q  306 cgaggctagaacaactacacaagctagaga--caccacactcttacccaaaacctttaagacaatggatttatgg 378  Q
    ||||||||||||||| |||||||| |||||  |||||||||||||||||||||| ||||| |||||| |||||||    
T  25483479 cgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaacc-ttaaggcaatgggtttatgg 25483406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 331 - 378
Target Start/End: Original strand, 36608701 - 36608747
Alignment:
Q  331 agagacaccacactcttacccaaaacctttaagacaatggatttatgg 378  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  36608701 agagacaccacactcttacccaaaacc-ttaagacaatggatttatgg 36608747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 306 - 380
Target Start/End: Complemental strand, 19504839 - 19504764
Alignment:
Q  306 cgaggctagaacaactacacaagctaga--gacaccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    ||||||||||||||| |||||||| |||  ||| |||||||||||||||||| ||||||| |||| |||||||||||    
T  19504839 cgaggctagaacaaccacacaagcaagatagacgccacactcttacccaaaa-ctttaaggcaatagatttatgggt 19504764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 306 - 380
Target Start/End: Complemental strand, 36629380 - 36629305
Alignment:
Q  306 cgaggctagaacaactacacaagctagaga--caccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    ||||||||||||||| |||||||| |||||  |||||||||||||||||||||| ||||| |||||  |||||||||    
T  36629380 cgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaacc-ttaaggcaatgagtttatgggt 36629305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 307 - 380
Target Start/End: Original strand, 1731661 - 1731735
Alignment:
Q  307 gaggctagaacaactacacaagctagaga--caccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    |||||||||||||| |||||||| |||||  |||||||||||||||||||||| ||||| |||| | |||||||||    
T  1731661 gaggctagaacaaccacacaagcaagagaaacaccacactcttacccaaaacc-ttaaggcaattggtttatgggt 1731735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 306 - 359
Target Start/End: Original strand, 39792873 - 39792928
Alignment:
Q  306 cgaggctagaacaactacacaagctagag--acaccacactcttacccaaaacctt 359  Q
    ||||||||||||||| |||||||| ||||  |||||||||||||||||||||||||    
T  39792873 cgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaacctt 39792928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 295 - 359
Target Start/End: Original strand, 54343010 - 54343076
Alignment:
Q  295 accatcaacaacgaggctagaacaactacacaagctagag--acaccacactcttacccaaaacctt 359  Q
    |||||| ||| ||||||||||||||| || ||||| ||||  |||||||||||||||||||||||||    
T  54343010 accatccacatcgaggctagaacaaccactcaagcaagagagacaccacactcttacccaaaacctt 54343076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 306 - 380
Target Start/End: Complemental strand, 3340950 - 3340875
Alignment:
Q  306 cgaggctagaacaactacacaagctaga--gacaccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    |||||||||||||||  ||||||| |||  |||||||||||||||||||||||| ||||| || ||| |||||||||    
T  3340950 cgaggctagaacaaccccacaagcaagaaagacaccacactcttacccaaaacc-ttaaggcagtgggtttatgggt 3340875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 306 - 380
Target Start/End: Complemental strand, 41370500 - 41370425
Alignment:
Q  306 cgaggctagaacaactacacaagctagaga--caccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    ||||||||||||||| || ||||| |||||  ||| |||||||||||||||| ||||||| |||||| |||||||||    
T  41370500 cgaggctagaacaaccactcaagcaagagagacactacactcttacccaaaa-ctttaaggcaatgggtttatgggt 41370425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 380
Target Start/End: Original strand, 50630795 - 50630843
Alignment:
Q  331 agagacaccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    ||||||||||||||||||||||||||| ||||| |||||| |||||||||    
T  50630795 agagacaccacactcttacccaaaacc-ttaaggcaatgggtttatgggt 50630843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 380
Target Start/End: Complemental strand, 54936312 - 54936264
Alignment:
Q  331 agagacaccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    ||||||||||||||||||||||||||| ||||| |||||| |||||||||    
T  54936312 agagacaccacactcttacccaaaacc-ttaaggcaatgggtttatgggt 54936264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 380
Target Start/End: Original strand, 55933164 - 55933212
Alignment:
Q  331 agagacaccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    ||||||||||||||||||||||||| ||||||| |||||| |||||||||    
T  55933164 agagacaccacactcttacccaaaa-ctttaaggcaatgggtttatgggt 55933212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 359
Target Start/End: Original strand, 4390114 - 4390169
Alignment:
Q  306 cgaggctagaacaactacacaagctagagacac--cacactcttacccaaaacctt 359  Q
    |||||||||||||||| ||||||| ||||| ||  |||||||||||||||||||||    
T  4390114 cgaggctagaacaactgcacaagcaagagagacgtcacactcttacccaaaacctt 4390169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 359
Target Start/End: Complemental strand, 10246062 - 10246007
Alignment:
Q  306 cgaggctagaacaactacacaagctag--agacaccacactcttacccaaaacctt 359  Q
    ||||||||||||||| | |||||| ||  |||||||||||||||||||||||||||    
T  10246062 cgaggctagaacaaccagacaagcaagggagacaccacactcttacccaaaacctt 10246007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 380
Target Start/End: Original strand, 22028383 - 22028457
Alignment:
Q  307 gaggctagaacaactacacaagctagag--acaccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    ||||||||||||||  ||||||| ||||  ||||||||||||||||||||| | |||||||||||  |||||||||    
T  22028383 gaggctagaacaacctcacaagcaagagagacaccacactcttacccaaaa-cattaagacaatgagtttatgggt 22028457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 359
Target Start/End: Original strand, 23817694 - 23817749
Alignment:
Q  306 cgaggctagaacaactacacaagctagag--acaccacactcttacccaaaacctt 359  Q
    ||||||||||||||| |||| ||| ||||  |||||||||||||||||||||||||    
T  23817694 cgaggctagaacaaccacactagcaagagagacaccacactcttacccaaaacctt 23817749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 359
Target Start/End: Complemental strand, 39404161 - 39404106
Alignment:
Q  306 cgaggctagaacaactacacaagctagagacac--cacactcttacccaaaacctt 359  Q
    ||||||||||||||| |||||||| ||||| ||  |||||||||||||||||||||    
T  39404161 cgaggctagaacaaccacacaagcaagagagacgccacactcttacccaaaacctt 39404106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 307 - 359
Target Start/End: Complemental strand, 54108679 - 54108625
Alignment:
Q  307 gaggctagaacaactacacaagctaga--gacaccacactcttacccaaaacctt 359  Q
    |||||||||||||| |||||||| |||  ||||||||||||||| ||||||||||    
T  54108679 gaggctagaacaaccacacaagcaagatagacaccacactcttagccaaaacctt 54108625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 379
Target Start/End: Complemental strand, 44620490 - 44620422
Alignment:
Q  312 tagaacaactacacaagctagagacac--cacactcttacccaaaacctttaagacaatggatttatggg 379  Q
    ||||||||| |||||||| ||||| ||  ||||||||||||||||||| ||||| |||||| ||||||||    
T  44620490 tagaacaaccacacaagcaagagaaacatcacactcttacccaaaacc-ttaaggcaatgggtttatggg 44620422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 306 - 369
Target Start/End: Complemental strand, 44621145 - 44621081
Alignment:
Q  306 cgaggctagaacaactacacaagctagaga--caccacactcttacccaaaacctttaagacaatg 369  Q
    ||||||||||| |||  ||||||| |||||  |||||||||||||||||||||| |||||||||||    
T  44621145 cgaggctagaataaccgcacaagcaagagaaacaccacactcttacccaaaacc-ttaagacaatg 44621081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 331 - 369
Target Start/End: Complemental strand, 45496921 - 45496884
Alignment:
Q  331 agagacaccacactcttacccaaaacctttaagacaatg 369  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  45496921 agagacaccacactcttacccaaaacc-ttaagacaatg 45496884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 306 - 377
Target Start/End: Complemental strand, 50459864 - 50459792
Alignment:
Q  306 cgaggctagaacaactacacaagc--tagagacaccacactcttacccaaaacctttaagacaatggatttatg 377  Q
    ||||||||||||||| ||||||||   ||||||||||| |||||||| |||||| |||||| ||||| ||||||    
T  50459864 cgaggctagaacaaccacacaagcaagagagacaccacgctcttacctaaaacc-ttaagataatgggtttatg 50459792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 331 - 380
Target Start/End: Complemental strand, 54109028 - 54108981
Alignment:
Q  331 agagacaccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    ||||||||||||||||||||||||||  ||||| |||||| |||||||||    
T  54109028 agagacaccacactcttacccaaaac--ttaaggcaatgggtttatgggt 54108981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 380
Target Start/End: Complemental strand, 11197342 - 11197294
Alignment:
Q  331 agagacaccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    |||||||||||||||||||||||||||  |||| |||||| |||||||||    
T  11197342 agagacaccacactcttacccaaaacc-ctaaggcaatgggtttatgggt 11197294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 380
Target Start/End: Original strand, 18932789 - 18932837
Alignment:
Q  331 agagacaccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    |||||||||||||||||||| |||||| ||||| |||||| |||||||||    
T  18932789 agagacaccacactcttacctaaaacc-ttaaggcaatgggtttatgggt 18932837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 380
Target Start/End: Complemental strand, 36572135 - 36572087
Alignment:
Q  331 agagacaccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    |||||||||| ||||| |||||||||| ||||| ||||||||||||||||    
T  36572135 agagacaccatactctaacccaaaacc-ttaaggcaatggatttatgggt 36572087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 380
Target Start/End: Complemental strand, 49303018 - 49302974
Alignment:
Q  335 acaccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    ||||||||||||||||||||||| ||||| |||||| |||||||||    
T  49303018 acaccacactcttacccaaaacc-ttaaggcaatgggtttatgggt 49302974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 380
Target Start/End: Original strand, 54017608 - 54017683
Alignment:
Q  306 cgaggctagaacaactacacaagctagagacac--cacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    ||||||||||||||| ||| |||| ||||| ||  |||||||||||| |||||| ||||| |||||| |||||||||    
T  54017608 cgaggctagaacaaccacataagcaagagagacatcacactcttacctaaaacc-ttaaggcaatgggtttatgggt 54017683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 359
Target Start/End: Original strand, 32941136 - 32941191
Alignment:
Q  306 cgaggctagaacaactacacaagctagagacac--cacactcttacccaaaacctt 359  Q
    |||||||||||||||  ||||||| ||||| ||  |||||||||||||||||||||    
T  32941136 cgaggctagaacaaccgcacaagcaagagagacgtcacactcttacccaaaacctt 32941191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 331 - 359
Target Start/End: Original strand, 34646689 - 34646717
Alignment:
Q  331 agagacaccacactcttacccaaaacctt 359  Q
    |||||||||||||||||||||||||||||    
T  34646689 agagacaccacactcttacccaaaacctt 34646717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 359
Target Start/End: Complemental strand, 39404541 - 39404486
Alignment:
Q  306 cgaggctagaacaactacacaagc--tagagacaccacactcttacccaaaacctt 359  Q
    ||||||||||||||| ||||||||   |||||||||||| |||| |||||||||||    
T  39404541 cgaggctagaacaaccacacaagcaagagagacaccacattcttgcccaaaacctt 39404486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 359
Target Start/End: Original strand, 49076844 - 49076899
Alignment:
Q  306 cgaggctagaacaactacacaagctaga--gacaccacactcttacccaaaacctt 359  Q
    |||||||||||||||  ||||||| |||  ||||||||||||| ||||||||||||    
T  49076844 cgaggctagaacaaccgcacaagcaagaaagacaccacactctaacccaaaacctt 49076899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 306 - 380
Target Start/End: Complemental strand, 11845334 - 11845259
Alignment:
Q  306 cgaggctagaacaactacacaagctagaga--caccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    |||||||||||||||| ||||||| |||||  ||||||||||||| |||||||| ||||| ||||||||||||||||    
T  11845334 cgaggctagaacaactgcacaagcaagagagacaccacactcttatccaaaacc-ttaaggcaatggatttatgggt 11845259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 306 - 380
Target Start/End: Original strand, 37533379 - 37533454
Alignment:
Q  306 cgaggctagaacaactacacaagcta--gagacaccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    |||||||||||||||  ||||||| |  |||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  37533379 cgaggctagaacaaccgcacaagcaaaagagacaccacactcttacccaaaacc-ttaaggcaatggatttatgggt 37533454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 308 - 379
Target Start/End: Complemental strand, 14681649 - 14681579
Alignment:
Q  308 aggctagaacaactacacaagctagagacaccacactcttacccaaaacctttaagacaatggatttatggg 379  Q
    ||||||||||||| ||||  |  ||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  14681649 aggctagaacaaccacacttgtgagagacaccacactcttacccaaaacc-ttaagacaatgggtttatggg 14681579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 306 - 378
Target Start/End: Complemental strand, 37167924 - 37167851
Alignment:
Q  306 cgaggctagaacaactacacaagctagaga--caccacactcttacccaaaacctttaagacaatggatttatgg 378  Q
    |||||||||||||||  ||||||| |||||  |||||||||||||||||||| ||||||| ||||||||||||||    
T  37167924 cgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaa-ctttaagtcaatggatttatgg 37167851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 306 - 377
Target Start/End: Complemental strand, 19122874 - 19122802
Alignment:
Q  306 cgaggctagaacaactacacaagctaga--gacaccacactcttacccaaaacctttaagacaatggatttatg 377  Q
    |||| |||||||||| |||||||| |||  |||||||||||||||||||||||| ||||| |||||||||||||    
T  19122874 cgagactagaacaaccacacaagcaagatagacaccacactcttacccaaaacc-ttaaggcaatggatttatg 19122802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 295 - 380
Target Start/End: Complemental strand, 30245227 - 30245145
Alignment:
Q  295 accatcaacaacgaggctagaacaactacacaagctagagacaccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    |||||| ||| ||||||| ||||||| |||||||  ||||||||||||||||||||||||||| ||||| |||||  |||||||||    
T  30245227 accatccacatcgaggcttgaacaaccacacaag--agagacaccacactcttacccaaaacc-ttaaggcaatgagtttatgggt 30245145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 295 - 380
Target Start/End: Complemental strand, 30253642 - 30253560
Alignment:
Q  295 accatcaacaacgaggctagaacaactacacaagctagagacaccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    |||||| ||| ||||||| ||||||| |||||||  ||||||||||||||||||||||||||| ||||| |||||  |||||||||    
T  30253642 accatccacatcgaggcttgaacaaccacacaag--agagacaccacactcttacccaaaacc-ttaaggcaatgagtttatgggt 30253560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 306 - 380
Target Start/End: Complemental strand, 7517723 - 7517648
Alignment:
Q  306 cgaggctagaacaactacacaagctaga--gacaccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    ||||||||||||||| |||||||  |||  |||||||||||||||||||||||| ||||| |||||| |||||||||    
T  7517723 cgaggctagaacaaccacacaagtgagacagacaccacactcttacccaaaacc-ttaaggcaatgggtttatgggt 7517648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 331 - 380
Target Start/End: Complemental strand, 29157681 - 29157633
Alignment:
Q  331 agagacaccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  29157681 agagacaccacactcttacccaaaacc-ttaaggcaatggatttatgggt 29157633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 306 - 359
Target Start/End: Original strand, 37532766 - 37532821
Alignment:
Q  306 cgaggctagaacaactacacaagctagag--acaccacactcttacccaaaacctt 359  Q
    |||||||||||||||  ||||||||||||  |||||||||||||||||||||||||    
T  37532766 cgaggctagaacaacagcacaagctagagagacaccacactcttacccaaaacctt 37532821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 296 - 380
Target Start/End: Original strand, 36939738 - 36939823
Alignment:
Q  296 ccatcaacaacgaggctagaacaactacacaagctagaga--caccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    ||||| ||| |||||||||||||||  || |||| |||||  ||||||||| |||||||||||| ||||| ||||||||||||||||    
T  36939738 ccatccacatcgaggctagaacaaccgcataagcaagagaaacaccacacttttacccaaaacc-ttaaggcaatggatttatgggt 36939823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 331 - 377
Target Start/End: Original strand, 34218076 - 34218121
Alignment:
Q  331 agagacaccacactcttacccaaaacctttaagacaatggatttatg 377  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||    
T  34218076 agagacaccacactcttacccaaaacc-ttaagacaatgggtttatg 34218121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 306 - 380
Target Start/End: Original strand, 1085631 - 1085706
Alignment:
Q  306 cgaggctagaacaactacacaagctagagacac--cacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    ||||||||||||||| |||||||  ||||| ||  ||||||||||||||||||| ||||| |||||| |||||||||    
T  1085631 cgaggctagaacaaccacacaagtaagagagacgccacactcttacccaaaacc-ttaaggcaatgggtttatgggt 1085706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 295 - 377
Target Start/End: Complemental strand, 30244424 - 30244341
Alignment:
Q  295 accatcaacaacgaggctagaacaactacacaagctagaga--caccacactcttacccaaaacctttaagacaatggatttatg 377  Q
    |||||| ||| ||||||| ||||||| |||||||  |||||  |||||||||||||||||||||| ||||| |||||| ||||||    
T  30244424 accatccacatcgaggcttgaacaaccacacaagtgagagagacaccacactcttacccaaaacc-ttaaggcaatgggtttatg 30244341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 306 - 380
Target Start/End: Original strand, 40094789 - 40094864
Alignment:
Q  306 cgaggctagaacaactacacaagctagagacac--cacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    |||||||||||||||  ||||||| ||||| ||  ||||||||||||||||||| ||||||| |||| |||||||||    
T  40094789 cgaggctagaacaacctcacaagcaagagagacgccacactcttacccaaaacc-ttaagacgatgggtttatgggt 40094864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 359
Target Start/End: Complemental strand, 45754858 - 45754803
Alignment:
Q  306 cgaggctagaacaactacacaagctagaga--caccacactcttacccaaaacctt 359  Q
    ||||||| ||||||| |||||||| |||||  ||||||||||||||||||||||||    
T  45754858 cgaggcttgaacaaccacacaagcaagagagacaccacactcttacccaaaacctt 45754803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 331 - 378
Target Start/End: Complemental strand, 9901759 - 9901713
Alignment:
Q  331 agagacaccacactcttacccaaaacctttaagacaatggatttatgg 378  Q
    ||||||||||||||||||||||||||| |||||||||||  |||||||    
T  9901759 agagacaccacactcttacccaaaacc-ttaagacaatgagtttatgg 9901713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 380
Target Start/End: Original strand, 23419 - 23467
Alignment:
Q  331 agagacaccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    ||||||||||||||||||||||||||| ||||| |||| | |||||||||    
T  23419 agagacaccacactcttacccaaaacc-ttaaggcaataggtttatgggt 23467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 380
Target Start/End: Complemental strand, 6054676 - 6054628
Alignment:
Q  331 agagacaccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    ||||||||||||||||||||||||||| ||||| |||||  |||||||||    
T  6054676 agagacaccacactcttacccaaaacc-ttaaggcaatgtgtttatgggt 6054628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 380
Target Start/End: Original strand, 21416183 - 21416231
Alignment:
Q  331 agagacaccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    |||||||||||||||||||||||||||  |||| |||||| |||||||||    
T  21416183 agagacaccacactcttacccaaaacc-ctaaggcaatgggtttatgggt 21416231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 380
Target Start/End: Original strand, 21619091 - 21619135
Alignment:
Q  335 acaccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    |||||||||| |||||||||||| |||||||||||| |||||||||    
T  21619091 acaccacacttttacccaaaacc-ttaagacaatgggtttatgggt 21619135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 331 - 359
Target Start/End: Complemental strand, 7554141 - 7554113
Alignment:
Q  331 agagacaccacactcttacccaaaacctt 359  Q
    |||||||||||||||||||||||||||||    
T  7554141 agagacaccacactcttacccaaaacctt 7554113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 331 - 379
Target Start/End: Original strand, 23569044 - 23569091
Alignment:
Q  331 agagacaccacactcttacccaaaacctttaagacaatggatttatggg 379  Q
    ||||||| ||||||||||||||||||| ||||| |||||| ||||||||    
T  23569044 agagacatcacactcttacccaaaacc-ttaaggcaatgggtttatggg 23569091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 355
Target Start/End: Complemental strand, 45433384 - 45433333
Alignment:
Q  306 cgaggctagaacaactacacaagctagaga--caccacactcttacccaaaa 355  Q
    |||||||||||||||  ||||||| |||||  ||||||||||||||||||||    
T  45433384 cgaggctagaacaaccccacaagcaagagagacaccacactcttacccaaaa 45433333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 359
Target Start/End: Complemental strand, 45434779 - 45434724
Alignment:
Q  306 cgaggctagaacaactacacaagctagagacac--cacactcttacccaaaacctt 359  Q
    |||||||||||||||| ||||||  ||||| ||  |||||||||||||||||||||    
T  45434779 cgaggctagaacaactccacaagtaagagagacatcacactcttacccaaaacctt 45434724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 331 - 359
Target Start/End: Complemental strand, 47129485 - 47129457
Alignment:
Q  331 agagacaccacactcttacccaaaacctt 359  Q
    |||||||||||||||||||||||||||||    
T  47129485 agagacaccacactcttacccaaaacctt 47129457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 306 - 359
Target Start/End: Original strand, 42405613 - 42405666
Alignment:
Q  306 cgaggctagaacaactacacaagctagagacaccacactcttacccaaaacctt 359  Q
    |||||||||||||||  ||||||| |||||||||||||||||||||||||||||    
T  42405613 cgaggctagaacaaccgcacaagcaagagacaccacactcttacccaaaacctt 42405666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 331 - 380
Target Start/End: Complemental strand, 35150122 - 35150074
Alignment:
Q  331 agagacaccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  35150122 agagacaccacacttttacccaaaacc-ttaagacaatggatttatgggt 35150074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 306 - 380
Target Start/End: Complemental strand, 41170777 - 41170702
Alignment:
Q  306 cgaggctagaacaactacacaagctagaga--caccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    ||||||||||||||| |||||||| ||| |  |||||||||||||||||||||| ||||| |||||| |||||||||    
T  41170777 cgaggctagaacaaccacacaagcaagaaaaacaccacactcttacccaaaacc-ttaaggcaatgggtttatgggt 41170702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 295 - 380
Target Start/End: Complemental strand, 32487547 - 32487461
Alignment:
Q  295 accatcaacaacgaggctagaacaactacacaagctagagacac--cacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    |||||| ||| ||||||||||||||| ||| |||| ||||| ||  ||||||||||||||||||| ||||| |||||| |||||||||    
T  32487547 accatccacatcgaggctagaacaaccacataagcaagagatacgtcacactcttacccaaaacc-ttaaggcaatgggtttatgggt 32487461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 306 - 380
Target Start/End: Original strand, 12662667 - 12662742
Alignment:
Q  306 cgaggctagaacaactacacaagctagaga--caccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    ||||||||||| |||  ||||||| ||| |  |||||||||||||||||||| ||| ||||||||||||||||||||    
T  12662667 cgaggctagaagaaccccacaagcaagaaaggcaccacactcttacccaaaaactt-aagacaatggatttatgggt 12662742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 306 - 380
Target Start/End: Original strand, 18603135 - 18603210
Alignment:
Q  306 cgaggctagaacaactacacaagctagagaca--ccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    |||||||||||| || |||||||| ||||| |  |||||||||||||||||||| ||||| |||||| |||||||||    
T  18603135 cgaggctagaactaccacacaagcaagagagatgccacactcttacccaaaacc-ttaaggcaatgggtttatgggt 18603210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 380
Target Start/End: Complemental strand, 26074728 - 26074680
Alignment:
Q  331 agagacaccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    ||||||||||||||||||||||||||| ||||| |||||| |||||||||    
T  26074728 agagacaccacactcttacccaaaacc-ttaaggcaatgggtttatgggt 26074680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 306 - 380
Target Start/End: Original strand, 40296330 - 40296405
Alignment:
Q  306 cgaggctagaacaactacacaagctagag--acaccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    |||||||||||||||  ||||||| ||||  ||||||||||||||||||||||| | ||| |||||| |||||||||    
T  40296330 cgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaacc-tcaaggcaatgggtttatgggt 40296405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 359
Target Start/End: Complemental strand, 6500593 - 6500538
Alignment:
Q  306 cgaggctagaacaactacacaagctagaga--caccacactcttacccaaaacctt 359  Q
    |||||||||||||||  ||||||| |||||  ||||||||||||||||||||||||    
T  6500593 cgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaacctt 6500538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 333 - 380
Target Start/End: Complemental strand, 13112651 - 13112605
Alignment:
Q  333 agacaccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    |||||||||||||||| |||||||| |||||||||||| |||||||||    
T  13112651 agacaccacactcttatccaaaacc-ttaagacaatgggtttatgggt 13112605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 306 - 358
Target Start/End: Original strand, 36492232 - 36492286
Alignment:
Q  306 cgaggctagaacaactacacaagctagag--acaccacactcttacccaaaacct 358  Q
    ||||||||||||||| |||||||| ||||  |||||||||||||| |||||||||    
T  36492232 cgaggctagaacaaccacacaagcaagagagacaccacactcttatccaaaacct 36492286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 306 - 380
Target Start/End: Original strand, 36568584 - 36568657
Alignment:
Q  306 cgaggctagaacaactacacaagctagagacaccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    ||||| ||||||||| |||||||  |||||| ||||||||||||| |||||| ||||| |||||| |||| ||||    
T  36568584 cgaggatagaacaaccacacaagagagagacgccacactcttaccaaaaacc-ttaaggcaatgggtttacgggt 36568657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 380
Target Start/End: Original strand, 9498696 - 9498744
Alignment:
Q  331 agagacaccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    ||||||||||||||||||||||||| | ||||| |||||| |||||||||    
T  9498696 agagacaccacactcttacccaaaatc-ttaaggcaatgggtttatgggt 9498744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 380
Target Start/End: Complemental strand, 13042655 - 13042607
Alignment:
Q  331 agagacaccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    |||||||||||||||||| |||||||| ||||| |||||| |||||||||    
T  13042655 agagacaccacactcttatccaaaacc-ttaaggcaatgggtttatgggt 13042607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 380
Target Start/End: Complemental strand, 15370215 - 15370167
Alignment:
Q  331 agagacaccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    ||||||||||||||||||||||||||| ||||| |  |||||||||||||    
T  15370215 agagacaccacactcttacccaaaacc-ttaaggctgtggatttatgggt 15370167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 380
Target Start/End: Original strand, 26074188 - 26074236
Alignment:
Q  331 agagacaccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    ||||||||||||||||||||||||||| ||||| |||||| || ||||||    
T  26074188 agagacaccacactcttacccaaaacc-ttaaggcaatgggttcatgggt 26074236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 380
Target Start/End: Original strand, 34753040 - 34753115
Alignment:
Q  306 cgaggctagaacaactacacaagctagagacac--cacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    |||||||||||||||  ||||||| ||||| ||  ||||||||||||||||||| ||||| |||| | |||||||||    
T  34753040 cgaggctagaacaaccgcacaagcaagagagacgccacactcttacccaaaacc-ttaaggcaatcggtttatgggt 34753115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 376
Target Start/End: Original strand, 36522279 - 36522323
Alignment:
Q  331 agagacaccacactcttacccaaaacctttaagacaatggatttat 376  Q
    ||||||||||||||||||||||||||| |||||| ||||| |||||    
T  36522279 agagacaccacactcttacccaaaacc-ttaagataatgggtttat 36522323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 359
Target Start/End: Original strand, 13415775 - 13415830
Alignment:
Q  306 cgaggctagaacaactacacaagctagagacac--cacactcttacccaaaacctt 359  Q
    |||||||||||||||  ||||||| ||||| ||  |||||||||||||||||||||    
T  13415775 cgaggctagaacaaccgcacaagcaagagagacgccacactcttacccaaaacctt 13415830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 331 - 359
Target Start/End: Complemental strand, 25328051 - 25328023
Alignment:
Q  331 agagacaccacactcttacccaaaacctt 359  Q
    |||||||||||||||||||||||||||||    
T  25328051 agagacaccacactcttacccaaaacctt 25328023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 331 - 359
Target Start/End: Original strand, 26900059 - 26900087
Alignment:
Q  331 agagacaccacactcttacccaaaacctt 359  Q
    |||||||||||||||||||||||||||||    
T  26900059 agagacaccacactcttacccaaaacctt 26900087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 306 - 380
Target Start/End: Complemental strand, 962741 - 962666
Alignment:
Q  306 cgaggctagaacaactacacaagctagag--acaccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    ||||||||||||||| |||||||| ||||  ||| ||||||||||||||||||| |||||||||||| |||||||||    
T  962741 cgaggctagaacaaccacacaagcaagagtgacaacacactcttacccaaaacc-ttaagacaatgggtttatgggt 962666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 307 - 380
Target Start/End: Original strand, 36178621 - 36178695
Alignment:
Q  307 gaggctagaacaactacacaagctagag--acaccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    |||||||||||||| |||||||| ||||  ||||||||||||||||||||||| ||||| |||||| |||||||||    
T  36178621 gaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaacc-ttaaggcaatgggtttatgggt 36178695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 306 - 380
Target Start/End: Original strand, 15511510 - 15511585
Alignment:
Q  306 cgaggctagaacaactacacaagctagag--acaccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    |||| |||||||||| |||||||| ||||  ||||||||||||||||||||| | |||||||||||| |||||||||    
T  15511510 cgagactagaacaaccacacaagcaagagagacaccacactcttacccaaaatc-ttaagacaatgggtttatgggt 15511585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 310 - 380
Target Start/End: Original strand, 28254258 - 28254327
Alignment:
Q  310 gctagaacaactacacaagctagagacaccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    |||||||||||  ||||||  ||||||||||||||||||||||||||| ||||| |||||  |||||||||    
T  28254258 gctagaacaaccccacaagagagagacaccacactcttacccaaaacc-ttaaggcaatgagtttatgggt 28254327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 295 - 366
Target Start/End: Original strand, 40163376 - 40163449
Alignment:
Q  295 accatcaacaacgaggctagaacaactacacaagctagag--acaccacactcttacccaaaacctttaagaca 366  Q
    |||||| ||| ||||| ||||||||| |||||||| ||||  |||||||||| |||||||||||||| ||||||    
T  40163376 accatctacatcgaggttagaacaaccacacaagcaagagagacaccacacttttacccaaaaccttaaagaca 40163449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 306 - 380
Target Start/End: Complemental strand, 6421874 - 6421799
Alignment:
Q  306 cgaggctagaacaactacacaagctagaga--caccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    |||||| |||||||| ||||||| ||||||  |||||||||||||||||||||| ||||| |||| | |||||||||    
T  6421874 cgaggccagaacaaccacacaagttagagagacaccacactcttacccaaaacc-ttaaggcaataggtttatgggt 6421799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 306 - 380
Target Start/End: Complemental strand, 6422253 - 6422178
Alignment:
Q  306 cgaggctagaacaactacacaagctagaga--caccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    ||||||||||||||| |||||||| |||||  ||||||||||||||| |||||| ||||| | |||| |||||||||    
T  6422253 cgaggctagaacaaccacacaagcaagagagacaccacactcttacctaaaacc-ttaaggctatgggtttatgggt 6422178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 306 - 380
Target Start/End: Original strand, 36178186 - 36178261
Alignment:
Q  306 cgaggctagaacaactacacaagctagaga--caccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    |||||||| |||||| |||||||| |||||  |||||||||||||||||||| | ||||| |||||| |||||||||    
T  36178186 cgaggctataacaaccacacaagcaagagaggcaccacactcttacccaaaatc-ttaaggcaatgggtttatgggt 36178261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 359
Target Start/End: Complemental strand, 5367598 - 5367543
Alignment:
Q  306 cgaggctagaacaactacacaagctagagacac--cacactcttacccaaaacctt 359  Q
    |||||||||||||||| ||||||| ||||| ||  |||||||||||||||||||||    
T  5367598 cgaggctagaacaactgcacaagcaagagagacgccacactcttacccaaaacctt 5367543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 331 - 361
Target Start/End: Complemental strand, 6421742 - 6421712
Alignment:
Q  331 agagacaccacactcttacccaaaaccttta 361  Q
    |||||||||||||||||||||||||||||||    
T  6421742 agagacaccacactcttacccaaaaccttta 6421712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 380
Target Start/End: Original strand, 14745336 - 14745384
Alignment:
Q  331 agagacaccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    |||||| |||||||||||||||||||| ||||| |||||| |||||||||    
T  14745336 agagacgccacactcttacccaaaacc-ttaaggcaatgggtttatgggt 14745384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 380
Target Start/End: Original strand, 14745709 - 14745757
Alignment:
Q  331 agagacaccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    |||||| |||||||||||||||||||| ||||| |||||| |||||||||    
T  14745709 agagacgccacactcttacccaaaacc-ttaaggcaatgggtttatgggt 14745757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 380
Target Start/End: Complemental strand, 15880379 - 15880331
Alignment:
Q  331 agagacaccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    |||||| |||||||||||||||||||| ||||| |||||| |||||||||    
T  15880379 agagacgccacactcttacccaaaacc-ttaaggcaatgggtttatgggt 15880331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 380
Target Start/End: Complemental strand, 37106331 - 37106256
Alignment:
Q  306 cgaggctagaacaactacacaagctagaga--caccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    ||||||||||||||   ||||||| |||||  |||||||||||||||||||||| |||||  ||||| |||||||||    
T  37106331 cgaggctagaacaatcgcacaagcaagagaaacaccacactcttacccaaaacc-ttaaggaaatgggtttatgggt 37106256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 355
Target Start/End: Original strand, 5543013 - 5543064
Alignment:
Q  306 cgaggctagaacaactacacaagc--tagagacaccacactcttacccaaaa 355  Q
    ||||||| |||||||  |||||||  ||||||||||||||||||||||||||    
T  5543013 cgaggcttgaacaaccgcacaagcaatagagacaccacactcttacccaaaa 5543064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 306 - 380
Target Start/End: Complemental strand, 41157134 - 41157059
Alignment:
Q  306 cgaggctagaacaactacacaagc--tagagacaccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    ||||||||||||||| ||||||||  |||||||||||||||||||||||||||||| ||| |||||  |||||||||    
T  41157134 cgaggctagaacaaccacacaagcaatagagacaccacactcttacccaaaaccttaaag-caatgagtttatgggt 41157059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 308 - 378
Target Start/End: Complemental strand, 41759624 - 41759553
Alignment:
Q  308 aggctagaacaactacacaagctagaga--caccacactcttacccaaaacctttaagacaatggatttatgg 378  Q
    ||||||||||||| ||| |||| |||||  |||||||||||||||||||||| ||||| ||||||||||||||    
T  41759624 aggctagaacaaccacataagcaagagagacaccacactcttacccaaaacc-ttaaggcaatggatttatgg 41759553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 380
Target Start/End: Complemental strand, 14318983 - 14318935
Alignment:
Q  331 agagacaccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    ||||||||||||||||||||||||||| ||||| |||| |||||||||||    
T  14318983 agagacaccacactcttacccaaaacc-ttaaggcaatagatttatgggt 14318935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 380
Target Start/End: Complemental strand, 17294693 - 17294645
Alignment:
Q  331 agagacaccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    ||||||||||||||||||||||||||| ||||| |||||| |||||||||    
T  17294693 agagacaccacactcttacccaaaacc-ttaaggcaatgggtttatgggt 17294645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 306 - 380
Target Start/End: Original strand, 26661537 - 26661612
Alignment:
Q  306 cgaggctagaacaactacacaagctagag--acaccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    ||||||| ||||||| |||||||| ||||  ||||||||||||||||||||||| ||||| |||||  |||||||||    
T  26661537 cgaggcttgaacaaccacacaagcgagagagacaccacactcttacccaaaacc-ttaaggcaatgagtttatgggt 26661612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 380
Target Start/End: Original strand, 32594758 - 32594806
Alignment:
Q  331 agagacaccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    ||||||||||||||||||||||||||| |||||||||||  |||||||||    
T  32594758 agagacaccacactcttacccaaaacc-ttaagacaatgagtttatgggt 32594806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 306 - 380
Target Start/End: Complemental strand, 41157518 - 41157443
Alignment:
Q  306 cgaggctagaacaactacacaagctaga--gacaccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    ||||||||||||||| |||||||| |||  |||||||||||||||| ||||||| | ||| |||||| |||||||||    
T  41157518 cgaggctagaacaaccacacaagcaagacagacaccacactcttactcaaaacc-taaaggcaatgggtttatgggt 41157443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 380
Target Start/End: Original strand, 44043814 - 44043862
Alignment:
Q  331 agagacaccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    ||||||||||||||||||||||||| | |||||||||||| |||||||||    
T  44043814 agagacaccacactcttacccaaaatc-ttaagacaatgggtttatgggt 44043862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 359
Target Start/End: Complemental strand, 37555872 - 37555817
Alignment:
Q  306 cgaggctagaacaactacacaagctagaga--caccacactcttacccaaaacctt 359  Q
    ||||||| ||||||| |||||||| |||||  ||||||||||||||||||||||||    
T  37555872 cgaggcttgaacaaccacacaagcaagagagacaccacactcttacccaaaacctt 37555817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 359
Target Start/End: Complemental strand, 37556254 - 37556199
Alignment:
Q  306 cgaggctagaacaactacacaagctagaga--caccacactcttacccaaaacctt 359  Q
    ||||||| ||||||| |||||||| |||||  ||||||||||||||||||||||||    
T  37556254 cgaggcttgaacaaccacacaagcaagagagacaccacactcttacccaaaacctt 37556199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 331 - 377
Target Start/End: Complemental strand, 3550836 - 3550791
Alignment:
Q  331 agagacaccacactcttacccaaaacctttaagacaatggatttatg 377  Q
    ||||||||||||||||||||||||| ||||||| |||||| ||||||    
T  3550836 agagacaccacactcttacccaaaa-ctttaaggcaatgggtttatg 3550791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 306 - 380
Target Start/End: Original strand, 44290839 - 44290915
Alignment:
Q  306 cgaggctagaacaactacacaagctagag--acaccacactc-ttacccaaaacctttaagacaatggatttatgggt 380  Q
    |||||||||||||||  ||||||| ||||  ||||||||||| |||||||||||| ||||| |||||| |||||||||    
T  44290839 cgaggctagaacaaccgcacaagcaagagatacaccacactctttacccaaaacc-ttaaggcaatgggtttatgggt 44290915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 376
Target Start/End: Original strand, 3537614 - 3537685
Alignment:
Q  306 cgaggctagaacaactacacaagctagagacac--cacactcttacccaaaacctttaagacaatggatttat 376  Q
    |||||||||||||||  ||||||| ||||| ||  ||||||||||||||||||| ||||| |||||| |||||    
T  3537614 cgaggctagaacaaccgcacaagcaagagagacgccacactcttacccaaaacc-ttaagccaatgggtttat 3537685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 380
Target Start/End: Original strand, 26661940 - 26661988
Alignment:
Q  331 agagacaccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    ||||||||||||||||||||||||||| ||||| |||| | |||||||||    
T  26661940 agagacaccacactcttacccaaaacc-ttaaggcaatcggtttatgggt 26661988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 380
Target Start/End: Original strand, 32168713 - 32168788
Alignment:
Q  306 cgaggctagaacaactacacaagctagagacac--cacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    |||||||||||||||  ||||||| ||||| ||  ||||||||||||||||||| | ||| |||||| |||||||||    
T  32168713 cgaggctagaacaaccgcacaagcaagagagacgccacactcttacccaaaacc-tcaaggcaatgggtttatgggt 32168788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 380
Target Start/End: Complemental strand, 34365041 - 34364993
Alignment:
Q  331 agagacaccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    ||||||||||||||||||||||||||| ||||| | |||| |||||||||    
T  34365041 agagacaccacactcttacccaaaacc-ttaaggctatgggtttatgggt 34364993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 380
Target Start/End: Original strand, 39066242 - 39066290
Alignment:
Q  331 agagacaccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    |||||||||||||||||| |||||||| |||||||||||  |||||||||    
T  39066242 agagacaccacactcttatccaaaacc-ttaagacaatgattttatgggt 39066290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 380
Target Start/End: Complemental strand, 41142516 - 41142440
Alignment:
Q  306 cgaggctagaacaactacacaagc--tagagacaccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    ||||||||||||||| ||||||||   |||||| ||||||||||  |||||| | ||||| |||||| |||||||||    
T  41142516 cgaggctagaacaaccacacaagcaagagagacgccacactctttaccaaaaaccttaaggcaatgggtttatgggt 41142440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 380
Target Start/End: Original strand, 44290473 - 44290548
Alignment:
Q  306 cgaggctagaacaactacacaagctaga--gacaccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    |||||||||||||||   |||||| |||  ||||||| |||||||||||||||| ||||| |||||| |||||||||    
T  44290473 cgaggctagaacaaccgtacaagcaagaaagacaccatactcttacccaaaacc-ttaaggcaatgggtttatgggt 44290548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 380
Target Start/End: Original strand, 50052065 - 50052113
Alignment:
Q  331 agagacaccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    ||||||||||||||||||||||||| |||||||| ||| | |||||||||    
T  50052065 agagacaccacactcttacccaaaa-ctttaagaaaataggtttatgggt 50052113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 331 - 359
Target Start/End: Complemental strand, 11977060 - 11977032
Alignment:
Q  331 agagacaccacactcttacccaaaacctt 359  Q
    |||||||||||||||||||||||||||||    
T  11977060 agagacaccacactcttacccaaaacctt 11977032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 359
Target Start/End: Original strand, 38804370 - 38804425
Alignment:
Q  306 cgaggctagaacaactacacaagctagaga--caccacactcttacccaaaacctt 359  Q
    |||||||||||||||  ||||||| |||||  ||| ||||||||||||||||||||    
T  38804370 cgaggctagaacaaccgcacaagcaagagagacactacactcttacccaaaacctt 38804425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 307 - 380
Target Start/End: Original strand, 42342404 - 42342478
Alignment:
Q  307 gaggctagaacaactacacaagctagagacac--cacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    ||||||||||||||  ||||||| ||||| ||  ||||||||||||||||||||| ||||||||||||||||||||    
T  42342404 gaggctagaacaaccgcacaagcaagagagacgtcacactcttacccaaaacctt-aagacaatggatttatgggt 42342478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 331 - 380
Target Start/End: Original strand, 12114604 - 12114652
Alignment:
Q  331 agagacaccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  12114604 agagacaccacactcttacccaaaacc-ttaagacaatgggtttatgggt 12114652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 331 - 380
Target Start/End: Complemental strand, 39389186 - 39389138
Alignment:
Q  331 agagacaccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  39389186 agagacaccacactcttacccaaaacc-ttaagacaatgggtttatgggt 39389138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 306 - 359
Target Start/End: Original strand, 54018213 - 54018268
Alignment:
Q  306 cgaggctagaacaactacacaagct--agagacaccacactcttacccaaaacctt 359  Q
    ||||||||||||||| ||||||||   |||||||||||||||||||||||||||||    
T  54018213 cgaggctagaacaaccacacaagcatgagagacaccacactcttacccaaaacctt 54018268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 308 - 380
Target Start/End: Complemental strand, 52634816 - 52634743
Alignment:
Q  308 aggctagaacaactacacaagctagagacac--cacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    |||||||||||||| ||||||| ||||| ||  ||||||||||||||||||| ||||| |||||| |||||||||    
T  52634816 aggctagaacaactgcacaagcaagagagacgtcacactcttacccaaaacc-ttaaggcaatgggtttatgggt 52634743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 306 - 380
Target Start/End: Original strand, 22303970 - 22304045
Alignment:
Q  306 cgaggctagaacaactacacaagctagag--acaccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    ||||||||||||||| || ||||| ||||  |||||||||||||| |||||||| ||||| |||||| |||||||||    
T  22303970 cgaggctagaacaaccactcaagcaagagagacaccacactcttatccaaaacc-ttaaggcaatgggtttatgggt 22304045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 380
Target Start/End: Original strand, 29644623 - 29644671
Alignment:
Q  331 agagacaccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    |||||| |||||||||||||||||||| |||||||||||| |||||||||    
T  29644623 agagacgccacactcttacccaaaacc-ttaagacaatgggtttatgggt 29644671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 380
Target Start/End: Original strand, 29644944 - 29644992
Alignment:
Q  331 agagacaccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    |||||| |||||||||||||||||||| |||||||||||| |||||||||    
T  29644944 agagacgccacactcttacccaaaacc-ttaagacaatgggtttatgggt 29644992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 306 - 380
Target Start/End: Original strand, 41359780 - 41359855
Alignment:
Q  306 cgaggctagaacaactacacaagc--tagagacaccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    ||||||||||||||| ||||||||   |||||| ||||| |||||||||||||| ||||| |||||| |||||||||    
T  41359780 cgaggctagaacaaccacacaagcgagagagacgccacattcttacccaaaacc-ttaaggcaatgggtttatgggt 41359855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 359
Target Start/End: Original strand, 37990654 - 37990709
Alignment:
Q  306 cgaggctagaacaactacacaagctagag--acaccacactcttacccaaaacctt 359  Q
    ||||||||||||||  |||||||| ||||  |||||||||||||||||||||||||    
T  37990654 cgaggctagaacaatcacacaagcaagagagacaccacactcttacccaaaacctt 37990709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 359
Target Start/End: Original strand, 37990992 - 37991047
Alignment:
Q  306 cgaggctagaacaactacacaagctagag--acaccacactcttacccaaaacctt 359  Q
    ||||||||||||||| ||| |||| ||||  |||||||||||||||||||||||||    
T  37990992 cgaggctagaacaaccacataagcaagagagacaccacactcttacccaaaacctt 37991047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 378
Target Start/End: Original strand, 39934961 - 39935043
Alignment:
Q  297 catcaacaacgaggctagaacaactacacaagc--tagagacaccacactcttacccaaaacctttaagacaatggatttatgg 378  Q
    |||| ||| ||||||||||||||| ||||||||   ||||||| ||||||||||| ||||| ||||||| |||||| |||||||    
T  39934961 catccacatcgaggctagaacaaccacacaagcaagagagacatcacactcttactcaaaa-ctttaaggcaatgggtttatgg 39935043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 380
Target Start/End: Original strand, 43346807 - 43346881
Alignment:
Q  307 gaggctagaacaactacacaagctagag--acaccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    ||||||||||||||  ||||||| ||||  ||||||||||||||||||||||| ||||| |||||  |||||||||    
T  43346807 gaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaacc-ttaaggcaatgagtttatgggt 43346881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 330 - 378
Target Start/End: Original strand, 54017589 - 54017636
Alignment:
Q  330 tagagacaccacactcttacccaaaacctttaagacaatggatttatgg 378  Q
    |||||||||||||||||||||||||||| ||||| |||||| |||||||    
T  54017589 tagagacaccacactcttacccaaaacc-ttaaggcaatgggtttatgg 54017636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 331 - 378
Target Start/End: Original strand, 45395695 - 45395741
Alignment:
Q  331 agagacaccacactcttacccaaaacctttaagacaatggatttatgg 378  Q
    ||||||||||||||||||||||||| | |||||||||||| |||||||    
T  45395695 agagacaccacactcttacccaaaa-cattaagacaatgggtttatgg 45395741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 306 - 377
Target Start/End: Original strand, 32462915 - 32462987
Alignment:
Q  306 cgaggctagaacaactacacaagctagag--acaccacactcttacccaaaacctttaagacaatggatttatg 377  Q
    |||||||||||||||  ||||||| ||||  ||||||||||||||| ||||||| ||||| |||||| ||||||    
T  32462915 cgaggctagaacaaccgcacaagcaagagagacaccacactcttactcaaaacc-ttaaggcaatgggtttatg 32462987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 380
Target Start/End: Complemental strand, 15772997 - 15772922
Alignment:
Q  306 cgaggctagaacaactacacaagctagaga--caccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    ||||| ||||||||| |||||||| |||||  ||||||||||||| |||||||||| ||| |||||  |||||||||    
T  15772997 cgaggttagaacaaccacacaagcaagagagacaccacactcttatccaaaaccttaaag-caatgagtttatgggt 15772922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 359
Target Start/End: Original strand, 21832360 - 21832413
Alignment:
Q  306 cgaggctagaacaactacacaagctagagacaccacactcttacccaaaacctt 359  Q
    ||||||||||||||| | |||||| ||||| ||  |||||||||||||||||||    
T  21832360 cgaggctagaacaaccagacaagcaagagagacgccactcttacccaaaacctt 21832413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 380
Target Start/End: Original strand, 22303705 - 22303749
Alignment:
Q  335 acaccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    ||||||||||||||||||||||| ||||| |||||| |||||||||    
T  22303705 acaccacactcttacccaaaacc-ttaaggcaatgggtttatgggt 22303749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 380
Target Start/End: Complemental strand, 22304685 - 22304637
Alignment:
Q  331 agagacaccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    ||||||||||||||||||||||||||| ||||| |||||  |||||||||    
T  22304685 agagacaccacactcttacccaaaacc-ttaaggcaatgtgtttatgggt 22304637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 377
Target Start/End: Complemental strand, 25755548 - 25755465
Alignment:
Q  295 accatcaacaacgaggctagaacaactacacaagc--tagagacaccacactcttacccaaaacctttaagacaatggatttatg 377  Q
    |||||| ||| |||||||||||||||  |||||||   |||||| ||||||| ||||||| || ||||| |||||||||||||||    
T  25755548 accatccacatcgaggctagaacaaccgcacaagcaagagagacgccacacttttacccacaa-ctttaggacaatggatttatg 25755465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 380
Target Start/End: Complemental strand, 32589846 - 32589771
Alignment:
Q  306 cgaggctagaacaactacacaagctagagacac--cacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    |||| |||||||||| |||||||| ||||| ||  | ||||||||||||||||| ||||| |||||| |||||||||    
T  32589846 cgagcctagaacaaccacacaagcaagagagacatcgcactcttacccaaaacc-ttaaggcaatgggtttatgggt 32589771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 380
Target Start/End: Complemental strand, 35946665 - 35946590
Alignment:
Q  306 cgaggctagaacaactacacaagctagaga--caccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    |||||||||||||| | ||||||| |||||  ||||||||| |||||||||||| ||||| ||| || |||||||||    
T  35946665 cgaggctagaacaattgcacaagcaagagagacaccacacttttacccaaaacc-ttaaggcaacgggtttatgggt 35946590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 380
Target Start/End: Original strand, 49336729 - 49336777
Alignment:
Q  331 agagacaccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    |||||||||||||||||||||| || ||||||||| |||| |||||||||    
T  49336729 agagacaccacactcttacccagaa-ctttaagactatgggtttatgggt 49336777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 379
Target Start/End: Original strand, 3135469 - 3135543
Alignment:
Q  306 cgaggctagaacaactacacaagcta--gagacaccacactcttacccaaaacctttaagacaatggatttatggg 379  Q
    |||||||||||||||  ||||||| |  ||||||||||||||||| | |||||| ||||| |||||| ||||||||    
T  3135469 cgaggctagaacaaccgcacaagcaaaagagacaccacactcttatctaaaacc-ttaaggcaatgggtttatggg 3135543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 359
Target Start/End: Original strand, 7766787 - 7766851
Alignment:
Q  295 accatcaacaacgaggctagaacaactacacaagctagagacaccacactcttacccaaaacctt 359  Q
    |||||| ||| ||||||||||||||| | |||||  |||||| ||||| ||||||| ||||||||    
T  7766787 accatctacatcgaggctagaacaaccatacaagtgagagacgccacaatcttacctaaaacctt 7766851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 331 - 359
Target Start/End: Complemental strand, 8328020 - 8327992
Alignment:
Q  331 agagacaccacactcttacccaaaacctt 359  Q
    |||||||||||||||||||||||||||||    
T  8328020 agagacaccacactcttacccaaaacctt 8327992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 331 - 359
Target Start/End: Complemental strand, 11661636 - 11661608
Alignment:
Q  331 agagacaccacactcttacccaaaacctt 359  Q
    |||||||||||||||||||||||||||||    
T  11661636 agagacaccacactcttacccaaaacctt 11661608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 377
Target Start/End: Complemental strand, 11662094 - 11662022
Alignment:
Q  306 cgaggctagaacaactacacaa-gctagagacaccacactcttacccaaaacctttaagacaatggatttatg 377  Q
    ||||||||||||||| |||||| |  ||||||||| ||||||||||||||| | ||||| |||| | ||||||    
T  11662094 cgaggctagaacaaccacacaatgagagagacacctcactcttacccaaaaaccttaaggcaattggtttatg 11662022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 331 - 359
Target Start/End: Complemental strand, 31190125 - 31190097
Alignment:
Q  331 agagacaccacactcttacccaaaacctt 359  Q
    |||||||||||||||||||||||||||||    
T  31190125 agagacaccacactcttacccaaaacctt 31190097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 331 - 359
Target Start/End: Original strand, 39336012 - 39336040
Alignment:
Q  331 agagacaccacactcttacccaaaacctt 359  Q
    |||||||||||||||||||||||||||||    
T  39336012 agagacaccacactcttacccaaaacctt 39336040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 359
Target Start/End: Original strand, 42342105 - 42342160
Alignment:
Q  306 cgaggctagaacaactacacaagctagagacac--cacactcttacccaaaacctt 359  Q
    |||||||||||||||  ||||||| ||||| ||  |||||||||||||||||||||    
T  42342105 cgaggctagaacaaccgcacaagcaagagagacgccacactcttacccaaaacctt 42342160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 331 - 359
Target Start/End: Complemental strand, 53596076 - 53596048
Alignment:
Q  331 agagacaccacactcttacccaaaacctt 359  Q
    |||||||||||||||||||||||||||||    
T  53596076 agagacaccacactcttacccaaaacctt 53596048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 331 - 359
Target Start/End: Complemental strand, 53596391 - 53596363
Alignment:
Q  331 agagacaccacactcttacccaaaacctt 359  Q
    |||||||||||||||||||||||||||||    
T  53596391 agagacaccacactcttacccaaaacctt 53596363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 331 - 359
Target Start/End: Original strand, 54017858 - 54017886
Alignment:
Q  331 agagacaccacactcttacccaaaacctt 359  Q
    |||||||||||||||||||||||||||||    
T  54017858 agagacaccacactcttacccaaaacctt 54017886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 306 - 381
Target Start/End: Complemental strand, 1846891 - 1846815
Alignment:
Q  306 cgaggctagaacaactacacaagcta--gagacaccacactcttacccaaaacctttaagacaatggatttatgggtg 381  Q
    |||||||||||||||  ||||||| |  ||||||||||||||||| |||||||| ||||| |||||||||||||||||    
T  1846891 cgaggctagaacaaccgcacaagcaaaagagacaccacactcttatccaaaacc-ttaaggcaatggatttatgggtg 1846815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 306 - 359
Target Start/End: Original strand, 14748357 - 14748408
Alignment:
Q  306 cgaggctagaacaactacacaagctagagacaccacactcttacccaaaacctt 359  Q
    ||||||||||||||| |||||||| ||||  |||||||||||||||||||||||    
T  14748357 cgaggctagaacaaccacacaagcaagag--accacactcttacccaaaacctt 14748408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 306 - 380
Target Start/End: Complemental strand, 2377897 - 2377822
Alignment:
Q  306 cgaggctagaacaactacacaagctaga--gacaccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    ||||||||||| ||| || ||||| |||  |||||||||||||||||||||||| ||||| |||||| |||||||||    
T  2377897 cgaggctagaaaaaccactcaagcaagaaagacaccacactcttacccaaaacc-ttaaggcaatgggtttatgggt 2377822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 306 - 380
Target Start/End: Original strand, 2578458 - 2578533
Alignment:
Q  306 cgaggctagaacaactacacaagcta--gagacaccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    |||||||||||||||  ||||||| |  |||||||||||||||||||||||||| ||||| | |||| |||||||||    
T  2578458 cgaggctagaacaaccgcacaagcaaaagagacaccacactcttacccaaaacc-ttaaggctatgggtttatgggt 2578533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 306 - 380
Target Start/End: Complemental strand, 3409402 - 3409327
Alignment:
Q  306 cgaggctagaacaactacacaagctagaga--caccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    |||||||||||||||  ||||||| |||||  |||||||||||||||||||||| ||||| |||||  |||||||||    
T  3409402 cgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaacc-ttaaggcaatgagtttatgggt 3409327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 306 - 380
Target Start/End: Complemental strand, 29518646 - 29518571
Alignment:
Q  306 cgaggctagaacaactacacaagctagaga--caccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    |||||||||||||||  ||||||| |||||  |||||||||||||||||||||| |||||  ||||| |||||||||    
T  29518646 cgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaacc-ttaaggtaatgggtttatgggt 29518571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 306 - 380
Target Start/End: Complemental strand, 29519063 - 29518988
Alignment:
Q  306 cgaggctagaacaactacacaagctagaga--caccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    |||||||||||||||  ||||||| |||||  |||||||||||||||||||||| |||||  ||||| |||||||||    
T  29519063 cgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaacc-ttaaggtaatgggtttatgggt 29518988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 306 - 380
Target Start/End: Complemental strand, 32741322 - 32741247
Alignment:
Q  306 cgaggctagaacaactacacaagctagaga--caccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    |||||||||||||||  ||||||| |||||  |||||||||||||||||||||| |||||  ||||| |||||||||    
T  32741322 cgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaacc-ttaaggtaatgggtttatgggt 32741247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 331 - 378
Target Start/End: Complemental strand, 3058342 - 3058296
Alignment:
Q  331 agagacaccacactcttacccaaaacctttaagacaatggatttatgg 378  Q
    ||||||||||||||||||||||||||| ||||| |||||| |||||||    
T  3058342 agagacaccacactcttacccaaaacc-ttaaggcaatgggtttatgg 3058296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 331 - 377
Target Start/End: Complemental strand, 16107794 - 16107749
Alignment:
Q  331 agagacaccacactcttacccaaaacctttaagacaatggatttatg 377  Q
    ||||||||||||||||||||||||||| ||||| |||||| ||||||    
T  16107794 agagacaccacactcttacccaaaacc-ttaaggcaatgggtttatg 16107749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 359
Target Start/End: Original strand, 2578857 - 2578905
Alignment:
Q  313 agaacaactacacaagcta--gagacaccacactcttacccaaaacctt 359  Q
    |||||||| |||||||| |  ||||||||||||||||||||||||||||    
T  2578857 agaacaaccacacaagcaaaagagacaccacactcttacccaaaacctt 2578905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 380
Target Start/End: Complemental strand, 3415574 - 3415526
Alignment:
Q  331 agagacaccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    |||||||||||||||||||| |||||| ||||| |||||| |||||||||    
T  3415574 agagacaccacactcttaccaaaaacc-ttaaggcaatgggtttatgggt 3415526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 380
Target Start/End: Original strand, 10074033 - 10074081
Alignment:
Q  331 agagacaccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    |||||||||||||| |||||||||||| ||||| |||||| |||||||||    
T  10074033 agagacaccacacttttacccaaaacc-ttaaggcaatgggtttatgggt 10074081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 380
Target Start/End: Original strand, 10074405 - 10074453
Alignment:
Q  331 agagacaccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    ||||||||||||||||||||||||||| ||||| |||||  |||||||||    
T  10074405 agagacaccacactcttacccaaaacc-ttaaggcaatgagtttatgggt 10074453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 380
Target Start/End: Original strand, 11637763 - 11637811
Alignment:
Q  331 agagacaccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    |||||||||||||||||| |||||| | |||||||||||| |||||||||    
T  11637763 agagacaccacactcttatccaaaatc-ttaagacaatgggtttatgggt 11637811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 380
Target Start/End: Complemental strand, 16455050 - 16454975
Alignment:
Q  306 cgaggctagaacaactacacaagctagagacac--cacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    |||||||||||||||  ||||||| ||||| ||  ||||||||||||||||||| ||||| |||| | |||||||||    
T  16455050 cgaggctagaacaaccgcacaagcaagagagacgccacactcttacccaaaacc-ttaaggcaataggtttatgggt 16454975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 380
Target Start/End: Original strand, 21130103 - 21130147
Alignment:
Q  335 acaccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    |||||||||||||| |||||||| ||||| ||||||||||||||||    
T  21130103 acaccacactcttatccaaaacc-ttaaggcaatggatttatgggt 21130147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 380
Target Start/End: Complemental strand, 35210316 - 35210272
Alignment:
Q  335 acaccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    ||||||||||||||||||||||| ||||| |||||| |||||||||    
T  35210316 acaccacactcttacccaaaacc-ttaaggcaatggttttatgggt 35210272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 359
Target Start/End: Original strand, 2579887 - 2579942
Alignment:
Q  306 cgaggctagaacaactacacaagctagag--acaccacactcttacccaaaacctt 359  Q
    |||||||||||||||  ||||||| ||||  |||||||| ||||||||||||||||    
T  2579887 cgaggctagaacaaccgcacaagcaagagagacaccacattcttacccaaaacctt 2579942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 359
Target Start/End: Complemental strand, 2843698 - 2843643
Alignment:
Q  306 cgaggctagaacaactacacaagctagagaca--ccacactcttacccaaaacctt 359  Q
    ||||||||||||||| || ||||| ||||| |  ||||||||||||||||||||||    
T  2843698 cgaggctagaacaaccactcaagcaagagagataccacactcttacccaaaacctt 2843643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 355
Target Start/End: Complemental strand, 3409803 - 3409752
Alignment:
Q  306 cgaggctagaacaactacacaagctagaga--caccacactcttacccaaaa 355  Q
    |||||||||||||||  ||||||| |||||  ||||||||||||||||||||    
T  3409803 cgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaa 3409752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 359
Target Start/End: Original strand, 12071706 - 12071761
Alignment:
Q  306 cgaggctagaacaactacacaagctagagacac--cacactcttacccaaaacctt 359  Q
    ||||||||||||||| |||||||  ||||| ||  |||||||||||||||||||||    
T  12071706 cgaggctagaacaaccacacaagtgagagagacgccacactcttacccaaaacctt 12071761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 359
Target Start/End: Original strand, 12085049 - 12085104
Alignment:
Q  306 cgaggctagaacaactacacaagctagagacac--cacactcttacccaaaacctt 359  Q
    ||||||||||||||| |||||||  ||||| ||  |||||||||||||||||||||    
T  12085049 cgaggctagaacaaccacacaagtgagagagacgccacactcttacccaaaacctt 12085104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000002; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 306 - 380
Target Start/End: Original strand, 3038305 - 3038380
Alignment:
Q  306 cgaggctagaacaactacacaagctagagaca--ccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    ||||||||||||||| |||||||| ||||| |  |||||||||||||||||||| ||||| |||||| |||||||||    
T  3038305 cgaggctagaacaaccacacaagcaagagagatgccacactcttacccaaaacc-ttaaggcaatgggtttatgggt 3038380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 331 - 380
Target Start/End: Original strand, 9483229 - 9483277
Alignment:
Q  331 agagacaccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  9483229 agagacaccacactcttacccaaaacc-ttaagacaatgggtttatgggt 9483277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 297 - 359
Target Start/End: Complemental strand, 34835028 - 34834964
Alignment:
Q  297 catcaacaacgaggctagaacaactacacaagctagaga--caccacactcttacccaaaacctt 359  Q
    |||| ||| ||||||||||||||| |||||||| |||||  ||||||||||||||||||||||||    
T  34835028 catccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaacctt 34834964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 306 - 379
Target Start/End: Complemental strand, 30441228 - 30441154
Alignment:
Q  306 cgaggctagaacaactacacaagctagaga--caccacactcttacccaaaacctttaagacaatggatttatggg 379  Q
    |||||||||||||||  ||||||| |||||  |||||||||||||||||||||| ||||| |||||| ||||||||    
T  30441228 cgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaacc-ttaaggcaatgggtttatggg 30441154  T

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Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 295 - 359
Target Start/End: Complemental strand, 3669841 - 3669775
Alignment:
Q  295 accatcaacaacgaggctagaacaactacacaagctagaga--caccacactcttacccaaaacctt 359  Q
    |||||| ||| |||||||||||||||  ||||||| |||||  ||||||||||||||||||||||||    
T  3669841 accatccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaacctt 3669775  T

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Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 306 - 380
Target Start/End: Complemental strand, 5916010 - 5915935
Alignment:
Q  306 cgaggctagaacaactacacaagctagaga--caccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    |||||||||||||||  ||||||| |||||  |||||||||||||||||||||| ||||| |||||  |||||||||    
T  5916010 cgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaacc-ttaaggcaatgagtttatgggt 5915935  T

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Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 380
Target Start/End: Complemental strand, 6651610 - 6651562
Alignment:
Q  331 agagacaccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    ||||||||||||||||||||||||||| ||||| ||||| ||||||||||    
T  6651610 agagacaccacactcttacccaaaacc-ttaaggcaatgaatttatgggt 6651562  T

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Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 306 - 380
Target Start/End: Complemental strand, 34835352 - 34835277
Alignment:
Q  306 cgaggctagaacaactacacaagctagag--acaccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    ||||||||||| ||| |||||||| ||||  ||||||||||||||||||||| ||||||| |||||  |||||||||    
T  34835352 cgaggctagaataaccacacaagcaagagtgacaccacactcttacccaaaa-ctttaaggcaatgagtttatgggt 34835277  T

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Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 306 - 380
Target Start/End: Complemental strand, 34835618 - 34835543
Alignment:
Q  306 cgaggctagaacaactacacaagctagag--acaccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    ||||||||||| ||| |||||||| ||||  ||||||||||||||||||||| ||||||| |||||  |||||||||    
T  34835618 cgaggctagaataaccacacaagcaagagtgacaccacactcttacccaaaa-ctttaaggcaatgagtttatgggt 34835543  T

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Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 306 - 380
Target Start/End: Complemental strand, 34835884 - 34835809
Alignment:
Q  306 cgaggctagaacaactacacaagctagag--acaccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    ||||||||||| ||| |||||||| ||||  ||||||||||||||||||||| ||||||| |||||  |||||||||    
T  34835884 cgaggctagaataaccacacaagcaagagtgacaccacactcttacccaaaa-ctttaaggcaatgagtttatgggt 34835809  T

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Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 306 - 380
Target Start/End: Original strand, 37544505 - 37544580
Alignment:
Q  306 cgaggctagaacaactacacaagctaga--gacaccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    |||||||||||||||  ||||||  |||  |||||||||||||||||||||||||| |||  |||||||||||||||    
T  37544505 cgaggctagaacaaccgcacaagtaagaaagacaccacactcttacccaaaaccttaaag-taatggatttatgggt 37544580  T

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Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 380
Target Start/End: Complemental strand, 147962 - 147888
Alignment:
Q  307 gaggctagaacaactacacaagctagaga--caccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    ||||||||||||||| ||||||  |||||  |||||||||||||||||||||| ||||| |||| | |||||||||    
T  147962 gaggctagaacaactgcacaagtaagagagacaccacactcttacccaaaacc-ttaaggcaataggtttatgggt 147888  T

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Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 356
Target Start/End: Original strand, 1014249 - 1014312
Alignment:
Q  295 accatcaacaacgaggctagaacaactacacaagct--agagacaccacactcttacccaaaac 356  Q
    |||||| ||| |||||||||||||||  |||||||   ||||||||||||||||||||||||||    
T  1014249 accatccacatcgaggctagaacaaccgcacaagcaggagagacaccacactcttacccaaaac 1014312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 359
Target Start/End: Complemental strand, 3670203 - 3670148
Alignment:
Q  306 cgaggctagaacaactacacaagctagaga--caccacactcttacccaaaacctt 359  Q
    |||||||||||||||  ||||||| |||||  ||||||||||||||||||||||||    
T  3670203 cgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaacctt 3670148  T

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Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 308 - 359
Target Start/End: Original strand, 4154685 - 4154736
Alignment:
Q  308 aggctagaacaactacacaagctagagacaccacactcttacccaaaacctt 359  Q
    |||| ||| |||| |||||||| |||||| ||||||||||||||||||||||    
T  4154685 aggccagagcaaccacacaagcgagagacgccacactcttacccaaaacctt 4154736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 308 - 380
Target Start/End: Complemental strand, 40518212 - 40518139
Alignment:
Q  308 aggctagaacaactacacaagctagagacac--cacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    ||||||||||||| |||||||| ||||| ||  ||||||||||||||||||| ||||| || ||| |||||||||    
T  40518212 aggctagaacaaccacacaagcaagagagacgccacactcttacccaaaacc-ttaaggcattgggtttatgggt 40518139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 306 - 357
Target Start/End: Original strand, 6876877 - 6876930
Alignment:
Q  306 cgaggctagaacaactacacaagctagaga--caccacactcttacccaaaacc 357  Q
    ||||||||||||||| |||||| | |||||  ||||||||||||||||||||||    
T  6876877 cgaggctagaacaaccacacaaacaagagaaacaccacactcttacccaaaacc 6876930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 380
Target Start/End: Complemental strand, 6732011 - 6731963
Alignment:
Q  331 agagacaccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    ||||||||||||||||||| ||||||| ||||| ||||| ||||||||||    
T  6732011 agagacaccacactcttactcaaaacc-ttaaggcaatgaatttatgggt 6731963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 380
Target Start/End: Complemental strand, 30359387 - 30359339
Alignment:
Q  331 agagacaccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    ||||||||||||||||||||||||||| ||||| | |||| |||||||||    
T  30359387 agagacaccacactcttacccaaaacc-ttaaggctatgggtttatgggt 30359339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 380
Target Start/End: Original strand, 45122099 - 45122147
Alignment:
Q  331 agagacaccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    ||||||||||||||||||||||||||| |||||| ||||  |||||||||    
T  45122099 agagacaccacactcttacccaaaacc-ttaagaaaatgagtttatgggt 45122147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 380
Target Start/End: Complemental strand, 45122767 - 45122692
Alignment:
Q  306 cgaggctagaacaactacacaagctagagacac--cacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    ||||||| ||||||| |||||||| ||||| ||  ||||||| ||||||||||| |||||||||||  |||||||||    
T  45122767 cgaggcttgaacaaccacacaagcaagagagacgccacactcatacccaaaacc-ttaagacaatgagtttatgggt 45122692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 310 - 359
Target Start/End: Original strand, 8919163 - 8919214
Alignment:
Q  310 gctagaacaactacacaagcta--gagacaccacactcttacccaaaacctt 359  Q
    ||||||||||| |||||||| |  ||||||||||||||||| ||||||||||    
T  8919163 gctagaacaaccacacaagcaaaagagacaccacactcttatccaaaacctt 8919214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 307 - 380
Target Start/End: Complemental strand, 40518724 - 40518650
Alignment:
Q  307 gaggctagaacaactacacaagctagagacac--cacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    |||||||||||||| |||||||| ||||  ||  ||||||||||||||||||| ||||| || ||| |||||||||    
T  40518724 gaggctagaacaaccacacaagcaagagtgacgtcacactcttacccaaaacc-ttaagtcattgggtttatgggt 40518650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 355
Target Start/End: Original strand, 40579284 - 40579335
Alignment:
Q  306 cgaggctagaacaactacacaagctagag--acaccacactcttacccaaaa 355  Q
    |||||||||||||||  ||||||| ||||  |||||||||||||||||||||    
T  40579284 cgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaa 40579335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 368
Target Start/End: Complemental strand, 5513 - 5476
Alignment:
Q  331 agagacaccacactcttacccaaaacctttaagacaat 368  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  5513 agagacaccacactcttacccaaaaactttaagacaat 5476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 306 - 380
Target Start/End: Original strand, 529 - 604
Alignment:
Q  306 cgaggctagaacaactacacaagctaga--gacaccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    ||||||||||| ||| || ||||| |||  |||||||||||||||||||||||| ||||| |||||| |||||||||    
T  529 cgaggctagaaaaaccactcaagcaagaaagacaccacactcttacccaaaacc-ttaaggcaatgggtttatgggt 604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 380
Target Start/End: Original strand, 1733 - 1781
Alignment:
Q  331 agagacaccacactcttacccaaaacctttaagacaatggatttatgggt 380  Q
    |||||||||||||||||||| |||||| ||||| |||||| |||||||||    
T  1733 agagacaccacactcttaccaaaaacc-ttaaggcaatgggtttatgggt 1781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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