View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21093_high_10 (Length: 329)
Name: NF21093_high_10
Description: NF21093
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21093_high_10 |
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Alignment Details
Target: chr2 (Bit Score: 288; Significance: 1e-161; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 1 - 311
Target Start/End: Original strand, 40411147 - 40411460
Alignment:
| Q |
1 |
tagcttttaacataaaagcaatttttatggactatactactaatagtttaatttaatctcccaaaatgaagggcatgtttatttt---ttgagggagaag |
97 |
Q |
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| T |
40411147 |
tagcttttaacataaaagcaatttttatggactatactactaatagtttaatttaatctcccaaaatgaagggcatgtttatttttttttgagggagaag |
40411246 |
T |
|
| Q |
98 |
ggcgtgtttattatacagaataaatatatcaaataaaattaaagaattcaacaaagggagaaaaacatgaagataattaattgagtacctgagaggccaa |
197 |
Q |
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| T |
40411247 |
ggcatgtttattatacagaataaatatatcaaataaaattaaagaaatcaacaaagggagaaaaacatgaaaataattaattgagtacctgagaggccaa |
40411346 |
T |
|
| Q |
198 |
tgaaagatcacctaataattgtttctttttattctcctctaagcagaaataagagtacaaaaccattccaaaaatagcaatcaatattccaataatgttc |
297 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40411347 |
tgaaagatcacctaataattgtttctttttattctcctctaagcagaaataagagtacaaaaccattccaaaaatagcaatcaatattccaataatgttc |
40411446 |
T |
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| Q |
298 |
cttccattgaaggg |
311 |
Q |
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|||||||||||||| |
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| T |
40411447 |
cttccattgaaggg |
40411460 |
T |
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