View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21093_high_11 (Length: 328)
Name: NF21093_high_11
Description: NF21093
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21093_high_11 |
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Alignment Details
Target: chr6 (Bit Score: 279; Significance: 1e-156; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 19 - 305
Target Start/End: Original strand, 33784866 - 33785152
Alignment:
| Q |
19 |
ttatcttcttgataatacaatcttattcaataaattatagcatcaagtcatgaatagattaactattgattttaaaattcagtaattactagtattactt |
118 |
Q |
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| T |
33784866 |
ttatcttcttgataatacaatcttattcaataaattatagcatgaagtcatgaatagattaactattgattttaaaattcagtaattactagtattactt |
33784965 |
T |
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| Q |
119 |
aaagtttcttattataggtcaaatgtaatgtgatgcatggaaacaatgcctacatgtctagttactttgagttggttcatatcaatgttttaaaaatcgg |
218 |
Q |
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| T |
33784966 |
aaagtttcttattataggtcaaatgtaatgtgatgcatggaaacaatgcctacatgtctagttactttgagttggttcatatcaatgttttaaaaatcgg |
33785065 |
T |
|
| Q |
219 |
atcgaaaatcaaatcagcgagactttcaggtcatggttcaattggttaaatcgcaatcaaaccaaccaacgaactaggtatgacaat |
305 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
33785066 |
atcgaaaatcaaatcagcgagactttcaggtcatggttcaattggttaaatcgcgatcaaaccaaccaacgaactaggtatgacaat |
33785152 |
T |
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