View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21093_high_23 (Length: 265)
Name: NF21093_high_23
Description: NF21093
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21093_high_23 |
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Alignment Details
Target: chr6 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 2 - 249
Target Start/End: Complemental strand, 35170073 - 35169829
Alignment:
| Q |
2 |
cgagtgaggcgatgagtttgagagattgttttctgatggaaggttttagttcggagtgaatgtcgagaatgcaagagaggaatggggagatggaatgtgg |
101 |
Q |
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| T |
35170073 |
cgagtgaagcgatgagtttgagagattgttttctgatggaaggttttagttcggagtgaatgtcgagaatgcaagagaggaatggggagatggaatgtgg |
35169974 |
T |
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| Q |
102 |
agttaatgagtggaggattgtttcgagctctttggttccgatatcgtgtgtgtctcgatctccaactttgtttaatgcattgtgtactctttgcttcatc |
201 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35169973 |
agttaatgagtggaggattgtttcgagctctttggttccgatatcgtgtgtgtctcgatctccaactttgtttaatgcattgtgtactctttgcttcatc |
35169874 |
T |
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| Q |
202 |
tcgaaattactactactcagcttgttgttggtcttcattgttattgct |
249 |
Q |
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|||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
35169873 |
tcgaaattac---tactcagcttgttgttggtcttcattgttattgct |
35169829 |
T |
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