View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21094_low_1 (Length: 839)

Name: NF21094_low_1
Description: NF21094
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21094_low_1
NF21094_low_1
[»] chr1 (57 HSPs)
chr1 (18-441)||(41983230-41983671)
chr1 (436-559)||(41983024-41983147)
chr1 (650-749)||(649856-649955)
chr1 (650-741)||(35369787-35369878)
chr1 (650-741)||(45333798-45333889)
chr1 (650-748)||(27464943-27465041)
chr1 (747-833)||(41982943-41983029)
chr1 (650-746)||(26469446-26469542)
chr1 (650-749)||(37274918-37275017)
chr1 (650-748)||(45121367-45121464)
chr1 (650-740)||(50932391-50932481)
chr1 (650-747)||(33100895-33100992)
chr1 (650-750)||(19055643-19055743)
chr1 (650-750)||(45640389-45640488)
chr1 (650-746)||(48470726-48470822)
chr1 (650-748)||(31088268-31088366)
chr1 (650-746)||(44914459-44914556)
chr1 (650-746)||(3981914-3982010)
chr1 (650-746)||(8350087-8350182)
chr1 (650-746)||(44519039-44519135)
chr1 (650-749)||(23645498-23645597)
chr1 (650-740)||(3851245-3851335)
chr1 (650-740)||(37619631-37619721)
chr1 (650-740)||(37685416-37685506)
chr1 (650-740)||(37700012-37700102)
chr1 (655-741)||(40861155-40861241)
chr1 (656-748)||(21401491-21401583)
chr1 (650-746)||(50726136-50726232)
chr1 (661-750)||(43775304-43775393)
chr1 (650-748)||(30467419-30467517)
chr1 (650-747)||(52576188-52576286)
chr1 (650-750)||(50149033-50149133)
chr1 (660-746)||(2571732-2571819)
chr1 (650-749)||(18434882-18434981)
chr1 (661-748)||(46907293-46907380)
chr1 (650-747)||(31827038-31827135)
chr1 (656-750)||(51718514-51718604)
chr1 (650-716)||(4776843-4776909)
chr1 (650-740)||(26020970-26021060)
chr1 (650-738)||(15082947-15083034)
chr1 (650-746)||(15469945-15470040)
chr1 (650-746)||(19947632-19947728)
chr1 (671-747)||(30735180-30735256)
chr1 (650-708)||(3159463-3159521)
chr1 (650-748)||(9566846-9566944)
chr1 (650-740)||(10627704-10627794)
chr1 (650-707)||(12657309-12657367)
chr1 (650-707)||(6693244-6693301)
chr1 (650-746)||(26207929-26208024)
chr1 (710-750)||(41677220-41677260)
chr1 (650-697)||(37985323-37985370)
chr1 (650-704)||(27533414-27533468)
chr1 (650-716)||(48261227-48261293)
chr1 (650-696)||(48858911-48858957)
chr1 (692-750)||(50333337-50333395)
chr1 (655-701)||(51436612-51436658)
chr1 (651-740)||(6809668-6809757)
[»] chr5 (36 HSPs)
chr5 (650-746)||(33037607-33037703)
chr5 (650-748)||(1671629-1671727)
chr5 (650-748)||(26791130-26791228)
chr5 (650-741)||(2972411-2972502)
chr5 (650-749)||(18258678-18258777)
chr5 (650-741)||(13168609-13168700)
chr5 (650-748)||(36739035-36739133)
chr5 (650-746)||(7287077-7287173)
chr5 (650-746)||(28306020-28306116)
chr5 (650-748)||(1274445-1274542)
chr5 (650-747)||(5168270-5168367)
chr5 (650-746)||(14923160-14923256)
chr5 (650-746)||(41321342-41321438)
chr5 (650-741)||(1764311-1764402)
chr5 (650-748)||(8686978-8687076)
chr5 (650-738)||(7076464-7076552)
chr5 (650-750)||(28467337-28467437)
chr5 (650-749)||(39591767-39591866)
chr5 (650-749)||(39592159-39592258)
chr5 (650-747)||(14051202-14051299)
chr5 (657-749)||(7552852-7552944)
chr5 (650-746)||(15479556-15479652)
chr5 (650-741)||(42175008-42175097)
chr5 (661-748)||(17626084-17626171)
chr5 (680-747)||(35634722-35634789)
chr5 (650-741)||(39054674-39054765)
chr5 (650-707)||(35646470-35646527)
chr5 (655-741)||(13309975-13310061)
chr5 (650-687)||(19521950-19521987)
chr5 (652-741)||(27546155-27546244)
chr5 (684-748)||(4088565-4088629)
chr5 (650-738)||(18660846-18660933)
chr5 (650-718)||(33958175-33958243)
chr5 (676-747)||(3565197-3565268)
chr5 (650-749)||(22972204-22972303)
chr5 (650-707)||(1079879-1079936)
[»] chr2 (42 HSPs)
chr2 (650-749)||(18254094-18254193)
chr2 (650-748)||(22888703-22888801)
chr2 (650-747)||(37737858-37737955)
chr2 (650-748)||(1248773-1248871)
chr2 (650-748)||(2076656-2076754)
chr2 (650-748)||(43487466-43487564)
chr2 (652-741)||(6049238-6049327)
chr2 (650-747)||(41195671-41195768)
chr2 (650-746)||(3838768-3838864)
chr2 (650-741)||(9207677-9207768)
chr2 (650-750)||(32477419-32477519)
chr2 (650-749)||(9647219-9647318)
chr2 (662-749)||(9760117-9760204)
chr2 (650-749)||(9990778-9990877)
chr2 (650-749)||(42421783-42421882)
chr2 (650-741)||(42091395-42091488)
chr2 (650-746)||(7698258-7698354)
chr2 (652-738)||(19633371-19633458)
chr2 (652-738)||(19830272-19830359)
chr2 (650-749)||(41042341-41042440)
chr2 (650-749)||(21611540-21611644)
chr2 (650-741)||(34944983-34945074)
chr2 (650-747)||(27490617-27490714)
chr2 (650-750)||(9194328-9194428)
chr2 (650-707)||(6511338-6511395)
chr2 (650-748)||(8848583-8848681)
chr2 (175-283)||(13016163-13016276)
chr2 (650-734)||(19108993-19109077)
chr2 (661-741)||(41056640-41056720)
chr2 (661-748)||(3097747-3097834)
chr2 (661-748)||(13333056-13333143)
chr2 (661-748)||(25270468-25270555)
chr2 (661-707)||(17388530-17388576)
chr2 (650-707)||(22416300-22416357)
chr2 (679-740)||(29349622-29349683)
chr2 (650-750)||(16973645-16973745)
chr2 (650-741)||(19642685-19642776)
chr2 (650-717)||(39147853-39147920)
chr2 (691-746)||(42434247-42434302)
chr2 (711-748)||(22416349-22416386)
chr2 (650-691)||(22445967-22446008)
chr2 (650-707)||(44287369-44287426)
[»] chr3 (50 HSPs)
chr3 (650-752)||(5114165-5114267)
chr3 (650-746)||(32924169-32924265)
chr3 (650-749)||(27541387-27541486)
chr3 (650-749)||(38926715-38926814)
chr3 (650-741)||(42358531-42358622)
chr3 (650-747)||(41309204-41309301)
chr3 (650-746)||(37503635-37503731)
chr3 (650-746)||(42356972-42357068)
chr3 (650-750)||(44856040-44856140)
chr3 (650-747)||(52939738-52939835)
chr3 (650-746)||(288813-288909)
chr3 (650-746)||(19149077-19149173)
chr3 (650-746)||(44413283-44413379)
chr3 (650-741)||(5244316-5244407)
chr3 (650-741)||(24256664-24256755)
chr3 (650-749)||(33939325-33939424)
chr3 (661-740)||(47472427-47472506)
chr3 (650-748)||(44813223-44813321)
chr3 (650-748)||(46623994-46624092)
chr3 (650-747)||(52254025-52254122)
chr3 (650-746)||(16969454-16969550)
chr3 (650-746)||(36670902-36670998)
chr3 (650-749)||(31157562-31157661)
chr3 (653-747)||(55151604-55151698)
chr3 (650-723)||(20547901-20547974)
chr3 (650-746)||(7934062-7934157)
chr3 (650-750)||(35597249-35597349)
chr3 (650-749)||(37302633-37302732)
chr3 (669-746)||(13735836-13735913)
chr3 (650-746)||(26014899-26014995)
chr3 (676-748)||(52326132-52326204)
chr3 (650-748)||(35376967-35377065)
chr3 (650-750)||(7668072-7668171)
chr3 (660-748)||(44383286-44383374)
chr3 (650-749)||(13348019-13348118)
chr3 (658-756)||(44445389-44445487)
chr3 (650-707)||(41505578-41505635)
chr3 (650-707)||(44413849-44413906)
chr3 (650-741)||(8847197-8847287)
chr3 (661-748)||(21217610-21217697)
chr3 (661-748)||(37056943-37057030)
chr3 (661-741)||(23592556-23592636)
chr3 (650-741)||(35201327-35201418)
chr3 (655-741)||(44463449-44463535)
chr3 (662-707)||(50318316-50318361)
chr3 (652-746)||(42889074-42889168)
chr3 (656-704)||(14226635-14226683)
chr3 (677-741)||(23600707-23600771)
chr3 (650-698)||(45000150-45000198)
chr3 (661-750)||(25641467-25641556)
[»] chr4 (54 HSPs)
chr4 (650-746)||(39440571-39440667)
chr4 (650-748)||(26492094-26492192)
chr4 (650-746)||(38376378-38376474)
chr4 (654-746)||(43175075-43175167)
chr4 (650-750)||(51986129-51986229)
chr4 (650-748)||(23369218-23369316)
chr4 (650-748)||(44539821-44539919)
chr4 (650-746)||(53801647-53801743)
chr4 (650-741)||(11068775-11068866)
chr4 (650-741)||(24575744-24575835)
chr4 (650-749)||(26732312-26732411)
chr4 (650-747)||(27965074-27965169)
chr4 (650-748)||(37297136-37297233)
chr4 (652-749)||(29175314-29175411)
chr4 (651-749)||(31641450-31641548)
chr4 (650-747)||(26724859-26724956)
chr4 (650-751)||(37997341-37997442)
chr4 (650-741)||(10250408-10250499)
chr4 (650-741)||(27050979-27051070)
chr4 (650-747)||(5622545-5622642)
chr4 (650-747)||(36177993-36178090)
chr4 (661-748)||(34616659-34616746)
chr4 (650-748)||(2575676-2575774)
chr4 (650-748)||(39478524-39478622)
chr4 (652-746)||(46213059-46213153)
chr4 (650-738)||(15175633-15175721)
chr4 (650-738)||(38134440-38134528)
chr4 (650-718)||(40348881-40348949)
chr4 (650-748)||(39195144-39195242)
chr4 (650-748)||(42853664-42853762)
chr4 (661-748)||(38382419-38382506)
chr4 (661-748)||(47181939-47182026)
chr4 (661-748)||(48402083-48402170)
chr4 (650-707)||(2268434-2268491)
chr4 (650-707)||(29531533-29531590)
chr4 (650-707)||(46634187-46634244)
chr4 (650-707)||(50608551-50608608)
chr4 (650-741)||(11672016-11672107)
chr4 (677-740)||(45083086-45083149)
chr4 (684-746)||(5233558-5233620)
chr4 (656-750)||(19473840-19473934)
chr4 (662-748)||(56363931-56364017)
chr4 (650-748)||(39654911-39655009)
chr4 (677-738)||(39606086-39606147)
chr4 (650-747)||(50831642-50831739)
chr4 (650-746)||(7632349-7632445)
chr4 (664-743)||(39447848-39447926)
chr4 (650-741)||(56474660-56474751)
chr4 (653-747)||(50721631-50721725)
chr4 (650-696)||(51255834-51255880)
chr4 (711-748)||(2268405-2268442)
chr4 (685-738)||(3316476-3316529)
chr4 (650-746)||(26907970-26908067)
chr4 (709-746)||(53786103-53786140)
[»] chr8 (28 HSPs)
chr8 (650-746)||(4054174-4054270)
chr8 (650-740)||(12898823-12898913)
chr8 (650-748)||(27325845-27325943)
chr8 (650-747)||(34186694-34186791)
chr8 (650-746)||(7271937-7272033)
chr8 (650-741)||(32501089-32501180)
chr8 (650-750)||(37449309-37449409)
chr8 (661-740)||(5277393-5277472)
chr8 (650-741)||(36816509-36816600)
chr8 (662-740)||(36251425-36251503)
chr8 (650-746)||(42768291-42768387)
chr8 (650-749)||(37133747-37133846)
chr8 (650-747)||(11253429-11253526)
chr8 (650-746)||(22719527-22719623)
chr8 (650-750)||(43397868-43397968)
chr8 (650-747)||(29025347-29025444)
chr8 (650-741)||(36660343-36660434)
chr8 (650-707)||(10731633-10731690)
chr8 (683-747)||(10692551-10692615)
chr8 (663-747)||(24479323-24479407)
chr8 (650-707)||(31249451-31249508)
chr8 (650-750)||(13106567-13106667)
chr8 (677-735)||(34084998-34085056)
chr8 (650-696)||(5600924-5600970)
chr8 (650-696)||(5639650-5639696)
chr8 (650-748)||(10839368-10839466)
chr8 (650-740)||(34639620-34639710)
chr8 (711-748)||(31249422-31249459)
[»] chr7 (29 HSPs)
chr7 (650-746)||(38956506-38956602)
chr7 (650-747)||(24614203-24614300)
chr7 (650-747)||(40112841-40112938)
chr7 (650-747)||(43025427-43025524)
chr7 (650-740)||(44895466-44895556)
chr7 (650-741)||(32529749-32529840)
chr7 (650-738)||(22918065-22918153)
chr7 (650-749)||(3937008-3937107)
chr7 (650-747)||(41189428-41189527)
chr7 (650-749)||(25192802-25192901)
chr7 (650-746)||(41989628-41989726)
chr7 (650-747)||(35072249-35072346)
chr7 (650-746)||(40417861-40417957)
chr7 (650-721)||(44189223-44189294)
chr7 (661-748)||(46022153-46022240)
chr7 (650-746)||(45851095-45851188)
chr7 (650-747)||(31445405-31445502)
chr7 (650-747)||(35098590-35098687)
chr7 (676-749)||(43942745-43942818)
chr7 (650-738)||(46578031-46578119)
chr7 (661-748)||(7701642-7701729)
chr7 (650-741)||(47391218-47391309)
chr7 (650-707)||(38073307-38073364)
chr7 (650-728)||(41863535-41863613)
chr7 (650-748)||(48062144-48062242)
chr7 (650-707)||(38861183-38861240)
chr7 (650-747)||(41018751-41018848)
chr7 (650-740)||(12007079-12007169)
chr7 (650-703)||(22925215-22925268)
[»] chr6 (26 HSPs)
chr6 (650-746)||(552880-552976)
chr6 (650-747)||(32316815-32316912)
chr6 (650-749)||(15974695-15974794)
chr6 (654-749)||(33430247-33430342)
chr6 (650-747)||(1156807-1156904)
chr6 (650-746)||(14818019-14818115)
chr6 (650-749)||(34047474-34047573)
chr6 (650-746)||(13689882-13689978)
chr6 (650-746)||(31077881-31077977)
chr6 (650-741)||(18737460-18737551)
chr6 (650-749)||(26595436-26595535)
chr6 (650-748)||(4820454-4820552)
chr6 (650-746)||(5694039-5694135)
chr6 (650-746)||(22079451-22079547)
chr6 (650-717)||(277078-277145)
chr6 (650-741)||(11612275-11612366)
chr6 (661-748)||(16199548-16199635)
chr6 (650-735)||(3853206-3853291)
chr6 (650-746)||(33603168-33603264)
chr6 (650-741)||(30423445-30423536)
chr6 (667-717)||(5570255-5570305)
chr6 (650-707)||(5080494-5080551)
chr6 (650-707)||(8098524-8098581)
chr6 (650-734)||(11014890-11014974)
chr6 (650-749)||(24900861-24900960)
chr6 (650-748)||(31883189-31883287)
[»] scaffold0056 (1 HSPs)
scaffold0056 (650-749)||(76504-76603)
[»] scaffold0199 (1 HSPs)
scaffold0199 (652-750)||(8757-8855)
[»] scaffold0098 (1 HSPs)
scaffold0098 (656-740)||(49388-49472)
[»] scaffold0519 (1 HSPs)
scaffold0519 (650-747)||(11869-11966)
[»] scaffold0067 (1 HSPs)
scaffold0067 (650-707)||(35610-35667)
[»] scaffold0041 (1 HSPs)
scaffold0041 (656-707)||(10890-10941)
[»] scaffold0087 (1 HSPs)
scaffold0087 (661-746)||(53249-53334)


Alignment Details
Target: chr1 (Bit Score: 326; Significance: 0; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 326; E-Value: 0
Query Start/End: Original strand, 18 - 441
Target Start/End: Complemental strand, 41983671 - 41983230
Alignment:
Q  18 gaattttataatcatgaaccatgg---cagtgcatgtatggtaggaaaacataaccggaagtgaagactcaagggaacatacataattaatgtagagaag 114  Q
    ||||||||||||||||||||||||   |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  41983671 gaattttataatcatgaaccatggtggcagtgcatgtatggtacgaaaacataactggaagtgaagactcaagggaacatacataattaatgtagagaag 41983572  T
Q  115 gtagggatatatctgtaatttgaaaaataatttaatcgaggattctaactcattccacataaattggagggtaagcaaaatgagaatcagtgatagaata 214  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  41983571 gtagggatatatttgtaatttgaaaaataatttaatcgaggattctaactcattccacataaattggagggtaagcaaaatgagaatcagggatggaata 41983472  T
Q  215 catgctattgagttccatcccacctttataatgacaatccaaacaataaaatcttaatttattccattc---------------tatcacatatcatcaa 299  Q
    |||||||||||||||||||||||| || |||| ||||||||||||||||||||||||||||||||||||                |||| ||||||| ||    
T  41983471 catgctattgagttccatcccacccttgtaattacaatccaaacaataaaatcttaatttattccattccatcccatttcatttcatcatatatcattaa 41983372  T
Q  300 tctaaacatagatgttgcatgttggtgagttggctagcataagtagtgggcaccatgttatccaaatacacacgtttaacaacaattttcaaatgcaact 399  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  41983371 tctaaacataggtgttgcatgttggtgagttggctagcataagtagtgggcaccatgtcatccaaatacacacgtttaacaacaattttcaaatgcaact 41983272  T
Q  400 acttccccactatacttacacatctcacctaggagctcaaaa 441  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  41983271 acttccccactatacttacacatctcacctaggagctcaaaa 41983230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 436 - 559
Target Start/End: Complemental strand, 41983147 - 41983024
Alignment:
Q  436 tcaaaaagaataatgcacattctagtttgatttttactataattgagatgagatgagttgatgcaagaatattccttctttcatatcatggttgattaag 535  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41983147 tcaaaaagaataatgcacattctagtttgatttttactataattgagatgagatgagttgatgcaagaatattccttctttcatatcatggttgattaag 41983048  T
Q  536 tgaagtatgcaatgcaatttttca 559  Q
    |||||||||||||| |||||||||    
T  41983047 tgaagtatgcaatgaaatttttca 41983024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 650 - 749
Target Start/End: Original strand, 649856 - 649955
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactcttt 749  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||| | |||||||||||||||| |||||||    
T  649856 tattgctttggtttttgtgtcactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatgtggatgttcaaataacacaactcttt 649955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 650 - 741
Target Start/End: Original strand, 35369787 - 35369878
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacac 741  Q
    ||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||| |||||||||||||||| ||||||||||||||||    
T  35369787 tattgctttgatttttgtgtcactacctcatttcctttataaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacac 35369878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 650 - 741
Target Start/End: Original strand, 45333798 - 45333889
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacac 741  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| || || |||||||||||||||||||||||||||    
T  45333798 tattgctttgatttttgtgtcactacctcatttcctttgtaaaattttaattgtcacaaaaattatcacatatatagatgttcaaataacac 45333889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 650 - 748
Target Start/End: Complemental strand, 27465041 - 27464943
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactctt 748  Q
    |||||||||| |||||||| ||||| ||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||||||| ||||||    
T  27465041 tattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactctt 27464943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 747 - 833
Target Start/End: Complemental strand, 41983029 - 41982943
Alignment:
Q  747 ttttcacaattgtttgatttctacttggataatagatgatcatcgctttgcaaatccaatttcctcttttttaattatctgtgctcc 833  Q
    |||||||||| |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  41983029 ttttcacaatggtttgatttctacttggataatggatgatcatccctttgcaaatccaatttcctcttttttaattatttgtgctcc 41982943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 650 - 746
Target Start/End: Original strand, 26469446 - 26469542
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactc 746  Q
    |||||||| | |||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||||||| ||||    
T  26469446 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 26469542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 650 - 749
Target Start/End: Complemental strand, 37275017 - 37274918
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactcttt 749  Q
    |||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||| ||  |||||||||||||||| |||||||    
T  37275017 tattgctttggtttttgtgtcactacctcatttcctttgcaaaattttgattgtcacaaaagttgtcacatgtaaggatgttcaaataacacaactcttt 37274918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 650 - 748
Target Start/End: Complemental strand, 45121464 - 45121367
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactctt 748  Q
    |||||||||| |||||||| ||||| ||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||||||| ||||||    
T  45121464 tattgctttggtttttgtgccacta-ctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactctt 45121367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 650 - 740
Target Start/End: Original strand, 50932391 - 50932481
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataaca 740  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||| |||| ||| |||||||||||||||| |||||||||||||||    
T  50932391 tattgctttgatttttgtgtcaatacctcatttcctttgtaaaattttggttgtaacaaaagttgtcacatatatggatgttcaaataaca 50932481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 650 - 747
Target Start/End: Original strand, 33100895 - 33100992
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactct 747  Q
    ||||| ||||||||||||||||||| |||||||||||| |||||||||| |||||||| ||||||||||||||||  ||||||||||||||| |||||    
T  33100895 tattgttttgatttttgtgtcactacctcatttcctttataaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaactct 33100992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 650 - 750
Target Start/End: Complemental strand, 19055743 - 19055643
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactcttt 749  Q
    ||||| |||| |||||||| || |||||||||||||||||||||||||  |||||||| |||||||||||||||| |||||||||||||||| |||||||    
T  19055743 tattgttttggtttttgtgacaatatctcatttcctttgtaaaattttagttgtcacaaaagttgtcacatatatggatgttcaaataacacaactcttt 19055644  T
Q  750 t 750  Q
    |    
T  19055643 t 19055643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 650 - 750
Target Start/End: Original strand, 45640389 - 45640488
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactcttt 749  Q
    ||||||||||||||||||| || ||||||||||| |||||||||||||| |||  ||| ||||||||||||||||||||||||||||||||| |||||||    
T  45640389 tattgctttgatttttgtgccaatatctcatttc-tttgtaaaattttggttgcaacaaaagttgtcacatatatagatgttcaaataacacaactcttt 45640487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 650 - 746
Target Start/End: Original strand, 48470726 - 48470822
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactc 746  Q
    ||||| |||| ||| |||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| ||||    
T  48470726 tattgttttggtttctgtgccaatatctcatttcctttgtaaaattttgattgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 48470822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 650 - 748
Target Start/End: Original strand, 31088268 - 31088366
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactctt 748  Q
    |||||||||| |||||||| ||||| |||||||  |||||||||||||| |||||||| |||||||||||||||| |||||||||||||||| ||||||    
T  31088268 tattgctttggtttttgtgccactacctcattttttttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactctt 31088366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 650 - 746
Target Start/End: Complemental strand, 44914556 - 44914459
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcac-agaagttgtcacatatatagatgttcaaataacacgactc 746  Q
    |||||||||  |||||||||||||| ||||||||||||||||||||||||||||| | | || ||||||||||||| |||||||||||||||| ||||    
T  44914556 tattgctttagtttttgtgtcactacctcatttcctttgtaaaattttgattgtcgcaaaaaattgtcacatatatggatgttcaaataacacaactc 44914459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 650 - 746
Target Start/End: Complemental strand, 3982010 - 3981914
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactc 746  Q
    ||||| |||| || |||||||| |||||||||| |||||||||||||||||||||||| | |||||||||| ||| |||||||||||||||| ||||    
T  3982010 tattgttttggttattgtgtcaatatctcattttctttgtaaaattttgattgtcacaaatgttgtcacatttatggatgttcaaataacacaactc 3981914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 650 - 746
Target Start/End: Complemental strand, 8350182 - 8350087
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactc 746  Q
    |||||||||| |||||||||||||| || |||||||||||||| ||||| |||||||  |||||||||||||||| |||||||||||||||| ||||    
T  8350182 tattgctttggtttttgtgtcactaccttatttcctttgtaaa-ttttggttgtcacgaaagttgtcacatatatggatgttcaaataacacaactc 8350087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 650 - 746
Target Start/End: Complemental strand, 44519135 - 44519039
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactc 746  Q
    |||||||||||||||||||  | || ||||||||||||||||||||||| || ||||| ||||||||||||||||  ||||||||||||||| ||||    
T  44519135 tattgctttgatttttgtgctaatacctcatttcctttgtaaaattttggttatcacaaaagttgtcacatatatgaatgttcaaataacacaactc 44519039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 650 - 749
Target Start/End: Original strand, 23645498 - 23645597
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactcttt 749  Q
    ||||| |||| |||||||| ||||| ||||||||||||||||||||||| |||||||| ||||||| ||||||||  ||||||||||||||  |||||||    
T  23645498 tattgttttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgttacatatatgtatgttcaaataacataactcttt 23645597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 650 - 740
Target Start/End: Original strand, 3851245 - 3851335
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataaca 740  Q
    ||||| |||| ||||| |||||||| |||||||||||| |||||||||| |||||| | |||||||||||||||| |||||||||||||||    
T  3851245 tattgttttggtttttctgtcactacctcatttcctttataaaattttggttgtcataaaagttgtcacatatatggatgttcaaataaca 3851335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 650 - 740
Target Start/End: Original strand, 37619631 - 37619721
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataaca 740  Q
    |||||| |||||||||||| || || ||||||||||||||||||||||| |||| | | |||||||||||||||| |||||||||||||||    
T  37619631 tattgcgttgatttttgtgccaatacctcatttcctttgtaaaattttggttgtaataaaagttgtcacatatatggatgttcaaataaca 37619721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 650 - 740
Target Start/End: Original strand, 37685416 - 37685506
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataaca 740  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||| || || |||||| |||  ||||||||||||||    
T  37685416 tattgctttgatttttgtgtcactacctcatttcttttgtaaaattttaattgtcacaaaaattatcacatgtatgaatgttcaaataaca 37685506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 650 - 740
Target Start/End: Complemental strand, 37700102 - 37700012
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataaca 740  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||| || || |||||| |||  ||||||||||||||    
T  37700102 tattgctttgatttttgtgtcactacctcatttcttttgtaaaattttaattgtcacaaaaattatcacatgtatgaatgttcaaataaca 37700012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 655 - 741
Target Start/End: Complemental strand, 40861241 - 40861155
Alignment:
Q  655 ctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacac 741  Q
    ||||| |||||||| |||||||| ||||||||| |||||||||  |||||||| |||||| ||||||||||||||||||||||||||    
T  40861241 ctttggtttttgtgccactatcttatttcctttataaaattttagttgtcacaaaagttgacacatatatagatgttcaaataacac 40861155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 656 - 748
Target Start/End: Original strand, 21401491 - 21401583
Alignment:
Q  656 tttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactctt 748  Q
    |||| ||||||||||| || ||||||| ||||||||||||||||||||  || ||||||||||||| || |||||||||||||||| ||||||    
T  21401491 tttggtttttgtgtcaatacctcattttctttgtaaaattttgattgtttcaaaagttgtcacataaatggatgttcaaataacacaactctt 21401583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 650 - 746
Target Start/End: Complemental strand, 50726232 - 50726136
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactc 746  Q
    ||||| ||||||||||||| ||||| ||||||| ||||| ||||||||| |||||||| || || |||||||||| |||||||||||||||| ||||    
T  50726232 tattgttttgatttttgtgccactacctcattttctttgcaaaattttggttgtcacaaaaattatcacatatatggatgttcaaataacacaactc 50726136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 661 - 750
Target Start/End: Original strand, 43775304 - 43775393
Alignment:
Q  661 tttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactctttt 750  Q
    ||||||| ||| |||||||||| |||||||||||||||||||||| | ||||||||||||||||  || |||||||||||| | ||||||    
T  43775304 tttttgtatcaatatctcattttctttgtaaaattttgattgtcataaaagttgtcacatatatgaatattcaaataacacaagtctttt 43775393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 650 - 748
Target Start/End: Complemental strand, 30467517 - 30467419
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactctt 748  Q
    |||||||||||||| ||||||| | |||| ||| |||||||||| |||  |||||||| ||||||||| |||  |||||||||||||||||| ||||||    
T  30467517 tattgctttgatttgtgtgtcaatctctcgttttctttgtaaaactttagttgtcacaaaagttgtcatataattagatgttcaaataacacaactctt 30467419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 650 - 747
Target Start/End: Complemental strand, 52576286 - 52576188
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatat-agatgttcaaataacacgactct 747  Q
    |||||||||| |||||||| |  || ||||||||||||||||||||||| |||||||| |||||||||| ||||| |  |||||||||||||| |||||    
T  52576286 tattgctttggtttttgtgccggtacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacctatatgaattgttcaaataacacaactct 52576188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 650 - 750
Target Start/End: Original strand, 50149033 - 50149133
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactcttt 749  Q
    |||||||||| ||||||||||| |   |||||| ||||||||||||||||||||  || ||||||||| ||| |  |||||||||||||||| |||||||    
T  50149033 tattgctttggtttttgtgtcaatcaatcattttctttgtaaaattttgattgttgcaaaagttgtcatataaaatgatgttcaaataacacaactcttt 50149132  T
Q  750 t 750  Q
    |    
T  50149133 t 50149133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 660 - 746
Target Start/End: Original strand, 2571732 - 2571819
Alignment:
Q  660 atttttgtgtcactatctcatttcctttgt-aaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactc 746  Q
    ||||||||||||||| ||||||| |||||| ||||||||| |||||||| ||||||||| ||  || |||||||||||||||| ||||    
T  2571732 atttttgtgtcactacctcattttctttgttaaaattttggttgtcacaaaagttgtcatatgcatggatgttcaaataacacaactc 2571819  T

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Target: chr1; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 650 - 749
Target Start/End: Original strand, 18434882 - 18434981
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactcttt 749  Q
    ||||| ||||||||||||| || ||  |||||| ||||| ||||||||| |||||||| |||||||||  || |||||| |||||||||||| |||||||    
T  18434882 tattgttttgatttttgtgccaatacatcattttctttgcaaaattttggttgtcacaaaagttgtcatctaaatagattttcaaataacacaactcttt 18434981  T

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Target: chr1; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 661 - 748
Target Start/End: Original strand, 46907293 - 46907380
Alignment:
Q  661 tttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactctt 748  Q
    ||||||||||| || ||||||| |||| |||||||||||||||| || ||||||||  ||| || |||||||||||||||| ||||||    
T  46907293 tttttgtgtcaatacctcattttctttataaaattttgattgtctcaaaagttgtcgtataaatggatgttcaaataacacaactctt 46907380  T

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Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 650 - 747
Target Start/End: Original strand, 31827038 - 31827135
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactct 747  Q
    ||||| |||| ||||||||||| || |||||||  |||||||||||||| ||||  || |||||||||  || ||||||||||||||||||| |||||    
T  31827038 tattgatttggtttttgtgtcaataactcattttttttgtaaaattttggttgtatcaaaagttgtcatctaaatagatgttcaaataacacaactct 31827135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 656 - 750
Target Start/End: Complemental strand, 51718604 - 51718514
Alignment:
Q  656 tttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactctttt 750  Q
    |||||||||||||||||||  |||||||||||||||| ||||  || ||||| ||||||||||||     |||||||||||||||| ||||||||    
T  51718604 tttgatttttgtgtcactacttcatttcctttgtaaagttttagttatcacaaaagttgtcacatg----gatgttcaaataacacaactctttt 51718514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 650 - 716
Target Start/End: Original strand, 4776843 - 4776909
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtc 716  Q
    |||| |||||||||||||| ||||| |||||||||||| ||||||||  ||||||||| ||||||||    
T  4776843 tattactttgatttttgtgccactacctcatttcctttataaaatttaaattgtcacaaaagttgtc 4776909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 650 - 740
Target Start/End: Complemental strand, 26021060 - 26020970
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataaca 740  Q
    ||||| ||||||| |||||||| |||||| |||  |||||||||||||||||||| || ||| ||||| ||| ||  ||||||||||||||    
T  26021060 tattgatttgattattgtgtcaatatctctttttttttgtaaaattttgattgtctcaaaagatgtcatataaatgaatgttcaaataaca 26020970  T

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Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 650 - 738
Target Start/End: Complemental strand, 15083034 - 15082947
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataa 738  Q
    |||||||||| ||||||||||| ||  ||||||||||||||||| ||||||||| ||| ||||| | ||||||||  |||||| |||||    
T  15083034 tattgctttggtttttgtgtcaatacttcatttcctttgtaaaagtttgattgt-acaaaagttttgacatatatgaatgttcgaataa 15082947  T

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Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 650 - 746
Target Start/End: Complemental strand, 15470040 - 15469945
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactc 746  Q
    ||||| |||| |||||| |  |||| |||||||||||| ||||||||| ||||||||| || || ||||||||||  ||||||||||||||| ||||    
T  15470040 tattgttttggtttttgcgctactacctcatttcctttataaaattttaattgtcaca-aaattatcacatatatgaatgttcaaataacacaactc 15469945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 650 - 746
Target Start/End: Complemental strand, 19947728 - 19947632
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactc 746  Q
    |||||||||| |||||||  || || ||| ||| |||| |||||||||| ||||| || ||||||||| ||| ||| ||||||||||||||| ||||    
T  19947728 tattgctttggtttttgtcccaatacctccttttctttataaaattttggttgtctcaaaagttgtcatataaataaatgttcaaataacacaactc 19947632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 671 - 747
Target Start/End: Complemental strand, 30735256 - 30735180
Alignment:
Q  671 actatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactct 747  Q
    |||| ||||||| |||| ||||||||||||||||||| || || ||||||| || ||| |||||||||||| |||||    
T  30735256 actacctcatttactttataaaattttgattgtcacaaaaattatcacatacatggatattcaaataacacaactct 30735180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 650 - 708
Target Start/End: Original strand, 3159463 - 3159521
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacag 708  Q
    |||||||||  |||||||| ||||| ||||||||||||||||||||||| |||| ||||    
T  3159463 tattgcttttgtttttgtgccactacctcatttcctttgtaaaattttggttgttacag 3159521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 650 - 748
Target Start/End: Complemental strand, 9566944 - 9566846
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactctt 748  Q
    |||||||||| ||||||||||| || |  |||| || |||||||||||| ||||| || ||||||||| |||  |  ||||||||||||||| ||||||    
T  9566944 tattgctttggtttttgtgtcaataccctattttctatgtaaaattttggttgtctcaaaagttgtcatataattgaatgttcaaataacacaactctt 9566846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 650 - 740
Target Start/End: Complemental strand, 10627794 - 10627704
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataaca 740  Q
    ||||| |||||||||||| ||| || | ||||| |||| |||||||||| ||||| || || |||||||||| ||| ||||| ||||||||    
T  10627794 tattgttttgatttttgtatcaataccacattttctttataaaattttgtttgtctcaaaaattgtcacatagatatatgttgaaataaca 10627704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 650 - 707
Target Start/End: Original strand, 12657309 - 12657367
Alignment:
Q  650 tattgctttgatttttgtgtc-actatctcatttcctttgtaaaattttgattgtcaca 707  Q
    |||||||||| |||||||||| |||| |||||||||||| |||||||||| ||||||||    
T  12657309 tattgctttggtttttgtgtccactacctcatttcctttataaaattttggttgtcaca 12657367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 650 - 707
Target Start/End: Original strand, 6693244 - 6693301
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcaca 707  Q
    ||||| |||| ||||| ||||| || |||||||||||||||||||||||||| |||||    
T  6693244 tattgttttggtttttatgtcaatacctcatttcctttgtaaaattttgattatcaca 6693301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 650 - 746
Target Start/End: Original strand, 26207929 - 26208024
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactc 746  Q
    |||||||||||||||  ||||| ||  |||||| ||||| |||||||||||| ||||| ||||| | |  || ||||||||||||||||||| ||||    
T  26207929 tattgctttgatttta-tgtcaatacatcattttctttgcaaaattttgattatcacaaaagttataatctaaatagatgttcaaataacacaactc 26208024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 710 - 750
Target Start/End: Complemental strand, 41677260 - 41677220
Alignment:
Q  710 agttgtcacatatatagatgttcaaataacacgactctttt 750  Q
    ||||||||||||||| |||||||||||||||| ||||||||    
T  41677260 agttgtcacatatatggatgttcaaataacacaactctttt 41677220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 650 - 697
Target Start/End: Complemental strand, 37985370 - 37985323
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaatttt 697  Q
    ||||||||| ||||||||| ||||| |||||||||||| |||||||||    
T  37985370 tattgctttaatttttgtgacactacctcatttcctttataaaatttt 37985323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 650 - 704
Target Start/End: Complemental strand, 27533468 - 27533414
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtc 704  Q
    ||||| |||||||||| ||||| || ||||||| ||||||||||||||| |||||    
T  27533468 tattgttttgatttttatgtcaatacctcattttctttgtaaaattttggttgtc 27533414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 650 - 716
Target Start/End: Original strand, 48261227 - 48261293
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtc 716  Q
    |||||||||| |||||||| || || ||| |||||||||||||| | |||||||| || ||||||||    
T  48261227 tattgctttggtttttgtgccaatacctcttttcctttgtaaaaatatgattgtctcaaaagttgtc 48261293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 650 - 696
Target Start/End: Original strand, 48858911 - 48858957
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattt 696  Q
    |||||||||||||||||||||||||||| | || ||||||| |||||    
T  48858911 tattgctttgatttttgtgtcactatctaaatttctttgtataattt 48858957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 692 - 750
Target Start/End: Original strand, 50333337 - 50333395
Alignment:
Q  692 aattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactctttt 750  Q
    ||||||| |||||||| |||||||||||||||| |||| | ||||||||| | ||||||    
T  50333337 aattttggttgtcacaaaagttgtcacatatatggatggttaaataacacaattctttt 50333395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 655 - 701
Target Start/End: Complemental strand, 51436658 - 51436612
Alignment:
Q  655 ctttgatttttgtgtcactatctcatttcctttgtaaaattttgatt 701  Q
    ||||||||||||||||| |||||| ||| |||||||||| |||||||    
T  51436658 ctttgatttttgtgtcaatatctcgttttctttgtaaaactttgatt 51436612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 651 - 740
Target Start/End: Original strand, 6809668 - 6809757
Alignment:
Q  651 attgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataaca 740  Q
    |||| |||||||||||||  | | | |||||| || | |||||||||| ||||| || ||||||||| ||| || |||||||||||||||    
T  6809668 attgttttgatttttgtgctaatgtatcattttctatataaaattttggttgtcccaaaagttgtcatataaatggatgttcaaataaca 6809757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 77; Significance: 3e-35; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 650 - 746
Target Start/End: Original strand, 33037607 - 33037703
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactc 746  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||||||| ||||    
T  33037607 tattgctttgatttttgtgtcactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 33037703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 650 - 748
Target Start/End: Original strand, 1671629 - 1671727
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactctt 748  Q
    ||||| |||| ||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| ||||||    
T  1671629 tattgttttggtttttgtgtcagtacctcatttcctttgtaaaattttgattgtcacaaaagttgtcacatatatggatgttcaaataacacaactctt 1671727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 650 - 748
Target Start/End: Complemental strand, 26791228 - 26791130
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactctt 748  Q
    |||||||||| |||||||| ||||| ||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||||||| ||||||    
T  26791228 tattgctttggtttttgtgccactaactcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactctt 26791130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 650 - 741
Target Start/End: Original strand, 2972411 - 2972502
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacac 741  Q
    |||||||||||||||||||||| || ||||||||||| || ||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  2972411 tattgctttgatttttgtgtcaatacctcatttccttcgtgaaattttgattgtcacaaaagttgtcacatatataaatgttcaaataacac 2972502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 650 - 749
Target Start/End: Complemental strand, 18258777 - 18258678
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactcttt 749  Q
    |||| ||||| |||||||| ||||| ||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||||||| |||||||    
T  18258777 tatttctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactcttt 18258678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 650 - 741
Target Start/End: Original strand, 13168609 - 13168700
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacac 741  Q
    |||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||| |||||||||    
T  13168609 tattactttggtttttgtgccactatctcatttcctttgtaaaattttgattgtcacaaaagttgtcacatatatgaatgttgaaataacac 13168700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 650 - 748
Target Start/End: Original strand, 36739035 - 36739133
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactctt 748  Q
    |||||||||| |||||||||||||| |||||||| |||||||||||||| |||||||| || || |||||||||| |||||||||||||||| ||||||    
T  36739035 tattgctttggtttttgtgtcactacctcatttcttttgtaaaattttggttgtcacaaaaattatcacatatatggatgttcaaataacacaactctt 36739133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 650 - 746
Target Start/End: Complemental strand, 7287173 - 7287077
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactc 746  Q
    ||||| |||| |||||||||||||| ||||||| ||||||||||||||| |||||||| ||||||||||||||||  ||||||||||||||| ||||    
T  7287173 tattgttttggtttttgtgtcactacctcattttctttgtaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaactc 7287077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 650 - 746
Target Start/End: Complemental strand, 28306116 - 28306020
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactc 746  Q
    |||||||||| | |||||| ||||| ||||||| ||||||||||||||| |||||||| |||||||||||||||| |||||||||||||||| ||||    
T  28306116 tattgctttggtctttgtgccactacctcattttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 28306020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 650 - 748
Target Start/End: Original strand, 1274445 - 1274542
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactctt 748  Q
    |||||||||| ||||||||||| ||||||||| |||||||||||||||| ||| || | |||||||||||||||| |||||||||||||||| ||||||    
T  1274445 tattgctttggtttttgtgtcaatatctcattccctttgtaaaattttggttg-cataaaagttgtcacatatatggatgttcaaataacacaactctt 1274542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 650 - 747
Target Start/End: Original strand, 5168270 - 5168367
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactct 747  Q
    ||||||||||||||||||| ||||| ||||||| ||||||||||||||  |||||||| ||||||||| ||||||  ||||||||||||||| |||||    
T  5168270 tattgctttgatttttgtgccactacctcattttctttgtaaaattttagttgtcacaaaagttgtcatatatatgaatgttcaaataacacaactct 5168367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 650 - 746
Target Start/End: Original strand, 14923160 - 14923256
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactc 746  Q
    |||||||||| |||||||| ||||| |||||||| |||||||||||||| || ||||  |||||||||||||||| |||||||||||||||| ||||    
T  14923160 tattgctttggtttttgtgccactacctcatttcttttgtaaaattttggttttcacgaaagttgtcacatatatcgatgttcaaataacacaactc 14923256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 650 - 746
Target Start/End: Original strand, 41321342 - 41321438
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactc 746  Q
    |||| ||||| ||||||||||| || ||||||||||||||||||||||| |||||||| || ||||||||||||| ||| |||||||||||| ||||    
T  41321342 tattactttggtttttgtgtcaatacctcatttcctttgtaaaattttggttgtcacaaaaattgtcacatatatggatattcaaataacacaactc 41321438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 650 - 741
Target Start/End: Original strand, 1764311 - 1764402
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacac 741  Q
    |||||||||| ||||| || ||||| |||||||||||| |||||||||| |||||||| ||||||||||||||||  |||||||||||||||    
T  1764311 tattgctttggtttttatgccactacctcatttcctttctaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacac 1764402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 650 - 748
Target Start/End: Original strand, 8686978 - 8687076
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactctt 748  Q
    ||||| |||| ||||||||||| || ||||||| |||||||||||||||||||| | | ||||||||||||||||  ||||||||||||||| ||||||    
T  8686978 tattgttttggtttttgtgtcaatacctcattttctttgtaaaattttgattgttataaaagttgtcacatatatgaatgttcaaataacactactctt 8687076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 650 - 738
Target Start/End: Complemental strand, 7076552 - 7076464
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataa 738  Q
    |||||||||| |||||||| || ||  |||||||||||||||||||||| |||||||| ||||||||||||||||  ||||||||||||    
T  7076552 tattgctttggtttttgtgccattacttcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataa 7076464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 650 - 750
Target Start/End: Complemental strand, 28467437 - 28467337
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactcttt 749  Q
    ||||| |||| |||||||||||||  |||||||||||| |||||||||| |||||||| || |||||||||||||  ||||||| ||||||| |||||||    
T  28467437 tattgttttggtttttgtgtcactgcctcatttcctttataaaattttggttgtcacaaaaattgtcacatatatgaatgttcagataacacaactcttt 28467338  T
Q  750 t 750  Q
    |    
T  28467337 t 28467337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 650 - 749
Target Start/End: Original strand, 39591767 - 39591866
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactcttt 749  Q
    |||||||||| ||| ||||||| | |||||||| |||||||||| |||| |||||||| | ||||||| ||| ||||||||||||||||||| |||||||    
T  39591767 tattgctttggtttgtgtgtcaatctctcattttctttgtaaaactttggttgtcacaaaggttgtcatataaatagatgttcaaataacacaactcttt 39591866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 650 - 749
Target Start/End: Original strand, 39592159 - 39592258
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactcttt 749  Q
    |||||||||| ||| ||||||| | |||||||| |||||||||| |||| |||||||| | ||||||| ||| ||||||||||||||||||| |||||||    
T  39592159 tattgctttggtttgtgtgtcaatctctcattttctttgtaaaactttggttgtcacaaaggttgtcatataaatagatgttcaaataacacaactcttt 39592258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 650 - 747
Target Start/End: Complemental strand, 14051299 - 14051202
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactct 747  Q
    ||||| |||| |||||||| ||||| ||||||| ||||||||||||||| |||||||| ||||| |||||||||| ||||||  |||||||| |||||    
T  14051299 tattgttttggtttttgtgccactacctcattttctttgtaaaattttggttgtcacaaaagttatcacatatatggatgtttgaataacacaactct 14051202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 657 - 749
Target Start/End: Complemental strand, 7552944 - 7552852
Alignment:
Q  657 ttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactcttt 749  Q
    ||||||||||||||| ||  |||||| ||||| ||||||||| |||||||| |||||||||  || || |||||||||||||||| |||||||    
T  7552944 ttgatttttgtgtcaatacatcattttctttgcaaaattttggttgtcacaaaagttgtcatctaaatggatgttcaaataacacaactcttt 7552852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 650 - 746
Target Start/End: Original strand, 15479556 - 15479652
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactc 746  Q
    ||||| |||| || || ||||| || |||||||  ||||||||||||| ||||||||| |||||||||||| ||| |||||||||||||||| ||||    
T  15479556 tattgttttggttattttgtcaatacctcattttttttgtaaaattttaattgtcacaaaagttgtcacatttatggatgttcaaataacacaactc 15479652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 650 - 741
Target Start/End: Original strand, 42175008 - 42175097
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacac 741  Q
    |||| ||||||| |||||||||||| |  ||||||||| ||||||||||| ||||| | |||||| ||||||||| ||||||||||||||||    
T  42175008 tattcctttgatctttgtgtcactacc--atttcctttataaaattttgactgtcataaaagttgacacatatatcgatgttcaaataacac 42175097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 661 - 748
Target Start/End: Original strand, 17626084 - 17626171
Alignment:
Q  661 tttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactctt 748  Q
    ||||||||||| || ||||||| |||| |||||||||| ||||| || ||||||||| ||| || |||||||||||||||| ||||||    
T  17626084 tttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 17626171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 680 - 747
Target Start/End: Complemental strand, 35634789 - 35634722
Alignment:
Q  680 tttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactct 747  Q
    ||||||||||||||||||| || ||| | |||||||||||||||| |||||||||||||||| |||||    
T  35634789 tttcctttgtaaaattttggttatcataaaagttgtcacatatatggatgttcaaataacacaactct 35634722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 650 - 741
Target Start/End: Original strand, 39054674 - 39054765
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacac 741  Q
    |||||||||||||||||||  | ||| |||||| ||||| |||||||||||| ||||| |||||||||  || || ||||||||||||||||    
T  39054674 tattgctttgatttttgtgcaaatatatcattttctttgcaaaattttgattatcacaaaagttgtcatctaaatggatgttcaaataacac 39054765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 650 - 707
Target Start/End: Original strand, 35646470 - 35646527
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcaca 707  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||  ||||||||    
T  35646470 tattgctttggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcaca 35646527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 655 - 741
Target Start/End: Original strand, 13309975 - 13310061
Alignment:
Q  655 ctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacac 741  Q
    ||||| ||||||||| | || ||||||| |||||||||| |||||||||| || || ||||||  || || ||||||||||||||||    
T  13309975 ctttggtttttgtgttaatacctcattttctttgtaaaaatttgattgtctcaaaaattgtcatctaaatggatgttcaaataacac 13310061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 650 - 687
Target Start/End: Complemental strand, 19521987 - 19521950
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttccttt 687  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  19521987 tattgctttgatttttgtgtcactacctcatttccttt 19521950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 652 - 741
Target Start/End: Original strand, 27546155 - 27546244
Alignment:
Q  652 ttgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacac 741  Q
    |||||||||||||| ||||| |||||  ||| ||||||| | || |||||||| || ||||||||||| | |||| | ||||||||||||    
T  27546155 ttgctttgatttttatgtcaatatctatttttctttgtacatttatgattgtctcaaaagttgtcacacaaatagttattcaaataacac 27546244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 684 - 748
Target Start/End: Original strand, 4088565 - 4088629
Alignment:
Q  684 ctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactctt 748  Q
    |||||||||| | ||||||||||| | ||||||| | | ||||||||||||||||||| ||||||    
T  4088565 ctttgtaaaaatatgattgtcacataggttgtcaaaaaaatagatgttcaaataacacaactctt 4088629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 650 - 738
Target Start/End: Original strand, 18660846 - 18660933
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataa 738  Q
    |||||||||| |||||||| || ||  ||||||||||||||||| ||||||||| ||| ||||| | ||||||||  |||||| |||||    
T  18660846 tattgctttggtttttgtgccaatacttcatttcctttgtaaaagtttgattgt-acaaaagttatgacatatatgaatgttcgaataa 18660933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 650 - 718
Target Start/End: Complemental strand, 33958243 - 33958175
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcac 718  Q
    |||||||||| ||||||||||| |||||| ||| ||||||||| || || |||||| | ||||||||||    
T  33958243 tattgctttggtttttgtgtcaatatctctttttctttgtaaatttatggttgtcataaaagttgtcac 33958175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 676 - 747
Target Start/End: Original strand, 3565197 - 3565268
Alignment:
Q  676 ctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactct 747  Q
    ||||||| ||||||||||||||| ||||| || ||||||||||  |  | |||||||||||||||| |||||    
T  3565197 ctcattttctttgtaaaattttggttgtctcaaaagttgtcactcaagtggatgttcaaataacacaactct 3565268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 650 - 749
Target Start/End: Original strand, 22972204 - 22972303
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactcttt 749  Q
    ||||| |||| ||||||| | | || || |||| ||||||||||||||  ||||| || ||||||| | ||| || |||||||||||||||| |||||||    
T  22972204 tattgttttggtttttgtattaataccttattttctttgtaaaattttagttgtctcaaaagttgttatataaatggatgttcaaataacacaactcttt 22972303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 650 - 707
Target Start/End: Complemental strand, 1079936 - 1079879
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcaca 707  Q
    ||||||||||  ||||||| || || ||||||| |||||||||||||| |||||||||    
T  1079936 tattgctttggattttgtgccaatacctcattttctttgtaaaattttaattgtcaca 1079879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 76; Significance: 1e-34; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 650 - 749
Target Start/End: Complemental strand, 18254193 - 18254094
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactcttt 749  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||||||| |||||||    
T  18254193 tattgctttggtttttgtgccactatctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactcttt 18254094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 650 - 748
Target Start/End: Complemental strand, 22888801 - 22888703
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactctt 748  Q
    |||||||||| |||||||| || || |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| ||||||    
T  22888801 tattgctttggtttttgtgccaatacctcatttcctttgtaaaattttgattgtcacaaaagttgtcacatatatggatgttcaaataacacaactctt 22888703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 650 - 747
Target Start/End: Complemental strand, 37737955 - 37737858
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactct 747  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||| |||||||||||||||| || ||||||||||||| |||||    
T  37737955 tattgctttgatttttgtgtcaatatctcatttcctttgtaaagttttggttgtcacaaaagttgtcacatatatggacgttcaaataacacaactct 37737858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 650 - 748
Target Start/End: Original strand, 1248773 - 1248871
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactctt 748  Q
    |||||||||| |||||||| ||||| |||||||||||||||||||||| ||| ||||| |||||||||||||||| |||||||||||||||| ||||||    
T  1248773 tattgctttggtttttgtgccactacctcatttcctttgtaaaattttaattatcacaaaagttgtcacatatatggatgttcaaataacacaactctt 1248871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 650 - 748
Target Start/End: Original strand, 2076656 - 2076754
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactctt 748  Q
    |||||||||||||||||||||| || ||||||| ||||||||||||||| |||||||| |||||||||||| ||| |||||||||||||||| ||||||    
T  2076656 tattgctttgatttttgtgtcaatacctcattttctttgtaaaattttggttgtcacaaaagttgtcacatctattgatgttcaaataacacaactctt 2076754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 650 - 748
Target Start/End: Original strand, 43487466 - 43487564
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactctt 748  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||| |||| ||| || ||||||||||||| |||||||||||||||| ||||||    
T  43487466 tattgctttggtttttgtgtcactacctcatttcctttgtaaaattttggttgttacaaaaattgtcacatatatggatgttcaaataacacaactctt 43487564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 652 - 741
Target Start/End: Complemental strand, 6049327 - 6049238
Alignment:
Q  652 ttgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacac 741  Q
    |||||||| |||||||| || || |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  6049327 ttgctttggtttttgtgccaatacctcatttcctttgtaaaattttgattgtcacaaaagttgtcacatatatggatgttcaaataacac 6049238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 650 - 747
Target Start/End: Original strand, 41195671 - 41195768
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactct 747  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||||| |||||||| ||||||| ||||||||  ||||||||||||||| |||||    
T  41195671 tattgctttggtttttgtgtcaatatctcatttcctttgtaaaattttggttgtcacaaaagttgttacatatatgaatgttcaaataacacaactct 41195768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 650 - 746
Target Start/End: Complemental strand, 3838864 - 3838768
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactc 746  Q
    ||||| ||||||||||||||||||   ||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||| ||||    
T  3838864 tattgttttgatttttgtgtcactgcttcatttcctttgtaaaattttaattatcacaaaagttgtcacatatatagatgttcaaataacacaactc 3838768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 650 - 741
Target Start/End: Original strand, 9207677 - 9207768
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacac 741  Q
    |||||||||| |||||||| ||||| ||||||||||||||||||||||| |||||||| || || |||||||||||||||||||||||||||    
T  9207677 tattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaaattatcacatatatagatgttcaaataacac 9207768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 650 - 750
Target Start/End: Original strand, 32477419 - 32477519
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactcttt 749  Q
    |||||||||||||||||| | | || |||||||||||||| |||||||| |||||||| ||||||||||||||||  ||||||||||||||| |||||||    
T  32477419 tattgctttgatttttgtatgaatacctcatttcctttgtcaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaactcttt 32477518  T
Q  750 t 750  Q
    |    
T  32477519 t 32477519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 650 - 749
Target Start/End: Original strand, 9647219 - 9647318
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactcttt 749  Q
    |||||||||| ||||||||||||||  |||||||||||||||||||||| |||||||| ||||| || |||||||  ||||||||||||||| |||||||    
T  9647219 tattgctttggtttttgtgtcactacttcatttcctttgtaaaattttggttgtcacaaaagttatcgcatatatgaatgttcaaataacacaactcttt 9647318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 662 - 749
Target Start/End: Original strand, 9760117 - 9760204
Alignment:
Q  662 ttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactcttt 749  Q
    ||||||| ||||| ||||||||||| | ||||||||| |||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  9760117 ttttgtgccactacctcatttccttggaaaaattttggttgtcacaaaagttgtcacatatatagatgttcaaataacacaactcttt 9760204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 650 - 749
Target Start/End: Original strand, 9990778 - 9990877
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactcttt 749  Q
    |||||||||| |||||||  |||||  ||||||||||||||||||||| ||||||||| ||||| |||||||||| |||||||||||||||| |||||||    
T  9990778 tattgctttggtttttgtaccactacttcatttcctttgtaaaattttaattgtcacaaaagttatcacatatatggatgttcaaataacacaactcttt 9990877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 650 - 749
Target Start/End: Complemental strand, 42421882 - 42421783
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactcttt 749  Q
    |||||||||| | |||||| ||||| |||||||||||| |||||||||| |||||||| ||||||||||||||||  ||||||||||||||| |||||||    
T  42421882 tattgctttggtgtttgtgccactacctcatttcctttctaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaactcttt 42421783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 650 - 741
Target Start/End: Complemental strand, 42091488 - 42091395
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacata--tatagatgttcaaataacac 741  Q
    |||||||||| |||||||||||||| ||| ||||||||||||||||||| |||||||| || ||||||||||  ||||||||||||||||||||    
T  42091488 tattgctttggtttttgtgtcactacctcgtttcctttgtaaaattttggttgtcacaaaaattgtcacatatatatagatgttcaaataacac 42091395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 650 - 746
Target Start/End: Original strand, 7698258 - 7698354
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactc 746  Q
    ||||||||||||||||||| ||||| || ||||||||||||||||||| ||| ||||| ||||| |||||| ||||||||||| |||||||| ||||    
T  7698258 tattgctttgatttttgtgccactacctaatttcctttgtaaaattttaattatcacaaaagttatcacatgtatagatgttctaataacacaactc 7698354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 652 - 738
Target Start/End: Original strand, 19633371 - 19633458
Alignment:
Q  652 ttgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtc-acatatatagatgttcaaataa 738  Q
    |||||||| ||||||| |||||| |||||||||||||||||||||||||||||||| ||||| || ||||||||| ||||||||||||    
T  19633371 ttgctttggtttttgtatcactacctcatttcctttgtaaaattttgattgtcacaaaagttatcaacatatataaatgttcaaataa 19633458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 652 - 738
Target Start/End: Original strand, 19830272 - 19830359
Alignment:
Q  652 ttgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtc-acatatatagatgttcaaataa 738  Q
    |||||||| ||||||| |||||| |||||||||||||||||||||||||||||||| ||||| || ||||||||| ||||||||||||    
T  19830272 ttgctttggtttttgtatcactacctcatttcctttgtaaaattttgattgtcacaaaagttatcaacatatataaatgttcaaataa 19830359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 650 - 749
Target Start/End: Original strand, 41042341 - 41042440
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactcttt 749  Q
    |||||||||| ||||| ||||| ||||||||||||||| |||||||||| |||||| | || ||||||||||||| |||||||||||||||  |||||||    
T  41042341 tattgctttggtttttatgtcaatatctcatttcctttataaaattttggttgtcataaaaattgtcacatatatggatgttcaaataacagaactcttt 41042440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 650 - 749
Target Start/End: Complemental strand, 21611644 - 21611540
Alignment:
Q  650 tattgctttgatttttgtgtcactatctca-----tttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgac 744  Q
    ||||||||||||||||||| ||||| ||||     |||| |||||||||||||| |||||| | |||||||||||||||| |||||||||||||||| ||    
T  21611644 tattgctttgatttttgtgccactacctcaccttatttcatttgtaaaattttggttgtcataaaagttgtcacatatatggatgttcaaataacacaac 21611545  T
Q  745 tcttt 749  Q
    |||||    
T  21611544 tcttt 21611540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 650 - 741
Target Start/End: Complemental strand, 34945074 - 34944983
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacac 741  Q
    ||||||||||||||||||| ||||| |||||||| |||||||||||||| |||||||  ||||||||||||||||  || ||||| ||||||    
T  34945074 tattgctttgatttttgtgccactacctcatttcttttgtaaaattttggttgtcacgaaagttgtcacatatatgaatattcaattaacac 34944983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 650 - 747
Target Start/End: Complemental strand, 27490714 - 27490617
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactct 747  Q
    |||||||||||||||||||| | ||  |||||| |||||||||||||||||||||||| |||||||||   | || |||||||||||||||| |||||    
T  27490714 tattgctttgatttttgtgttaatacatcattttctttgtaaaattttgattgtcacaaaagttgtcatcaaaatggatgttcaaataacacaactct 27490617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 650 - 750
Target Start/End: Original strand, 9194328 - 9194428
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactcttt 749  Q
    ||||| |||| |||||||| || || |||||||| |||||||||||||| |||||||| || |||| ||||||||  ||||||||||||||| |||||||    
T  9194328 tattgttttggtttttgtgccattacctcatttcttttgtaaaattttggttgtcacaaaaattgttacatatatgaatgttcaaataacacaactcttt 9194427  T
Q  750 t 750  Q
    |    
T  9194428 t 9194428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 650 - 707
Target Start/End: Original strand, 6511338 - 6511395
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcaca 707  Q
    |||||||||| |||||||||||||| |||||||||||| |||||||||||||||||||    
T  6511338 tattgctttggtttttgtgtcactacctcatttcctttataaaattttgattgtcaca 6511395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 650 - 748
Target Start/End: Complemental strand, 8848681 - 8848583
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactctt 748  Q
    ||||||||||||||||||  || ||  |||||| ||||| |||||||||||||||||| || || |||  || ||||||||||||||||||| ||||||    
T  8848681 tattgctttgatttttgtaccaatacatcattttctttgcaaaattttgattgtcacaaaaattatcatctaaatagatgttcaaataacacaactctt 8848583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 175 - 283
Target Start/End: Complemental strand, 13016276 - 13016163
Alignment:
Q  175 aaattggagggtaagcaaaatgagaatcagtgatagaatacatgctattgagtt-----ccatcccacctttataatgacaatccaaacaataaaatctt 269  Q
    ||||||||||||||||||||||||| | |||||| ||||||||   ||||||||     |||||||| | || |||| || ||||||||||| |||| ||    
T  13016276 aaattggagggtaagcaaaatgagagtaagtgatggaatacatttcattgagttccattccatcccatccttttaattactatccaaacaatgaaatttt 13016177  T
Q  270 aatttattccattc 283  Q
    ||||||||||||||    
T  13016176 aatttattccattc 13016163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 650 - 734
Target Start/End: Complemental strand, 19109077 - 19108993
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaa 734  Q
    ||||||||||||||||||| |||||  |||||||||||| ||||  ||  |||||||| ||||||||||||||||  ||||||||    
T  19109077 tattgctttgatttttgtgccactacttcatttcctttgcaaaaaatttgttgtcacaaaagttgtcacatatatgaatgttcaa 19108993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 661 - 741
Target Start/End: Complemental strand, 41056720 - 41056640
Alignment:
Q  661 tttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacac 741  Q
    ||||||||||| || ||||||| |||| |||||||||| ||||| || ||||||||| ||| || ||||||||||||||||    
T  41056720 tttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacac 41056640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 661 - 748
Target Start/End: Complemental strand, 3097834 - 3097747
Alignment:
Q  661 tttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactctt 748  Q
    ||||||||| | || ||||||| |||| |||||||||| ||||| || ||||||||| ||| || |||||||||||||||| ||||||    
T  3097834 tttttgtgtaaataactcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 3097747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 661 - 748
Target Start/End: Complemental strand, 13333143 - 13333056
Alignment:
Q  661 tttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactctt 748  Q
    ||||||||||| ||  |||||| |||| |||||||||| ||||| || ||||||||| ||| || |||||||||||||||| ||||||    
T  13333143 tttttgtgtcaatacatcattttctttataaaattttggttgtctcaaaagttgtcatataaatcgatgttcaaataacacaactctt 13333056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 661 - 748
Target Start/End: Complemental strand, 25270555 - 25270468
Alignment:
Q  661 tttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactctt 748  Q
    ||||||||||| || ||||||| |||| |||||||||| ||||| |  ||||||||| ||| || |||||||||||||||| ||||||    
T  25270555 tttttgtgtcaatacctcattttctttataaaattttggttgtctcgaaagttgtcatataaatggatgttcaaataacacaactctt 25270468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 661 - 707
Target Start/End: Complemental strand, 17388576 - 17388530
Alignment:
Q  661 tttttgtgtcactatctcatttcctttgtaaaattttgattgtcaca 707  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||    
T  17388576 tttttgtgccactacctcatttcctttgtaaaattttgattgtcaca 17388530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 650 - 707
Target Start/End: Original strand, 22416300 - 22416357
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcaca 707  Q
    |||||||||| |||||||| ||||  ||||||| ||||||||||||||| ||||||||    
T  22416300 tattgctttggtttttgtgccactgcctcattttctttgtaaaattttggttgtcaca 22416357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 679 - 740
Target Start/End: Original strand, 29349622 - 29349683
Alignment:
Q  679 atttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataaca 740  Q
    |||| |||||||||||||||||||||||| |||||||||  || || |||||| ||||||||    
T  29349622 attttctttgtaaaattttgattgtcacaaaagttgtcatctaaatggatgttgaaataaca 29349683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 650 - 750
Target Start/End: Complemental strand, 16973745 - 16973645
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactcttt 749  Q
    |||| |||||||||||| |||| | ||||||||  |||||||||||||| ||||  ||  |||||||  ||| ||||||||| ||||||||  |||||||    
T  16973745 tattactttgatttttgggtcaatttctcattttatttgtaaaattttggttgtatcaatagttgtccaataaatagatgtttaaataacaaaactcttt 16973646  T
Q  750 t 750  Q
    |    
T  16973645 t 16973645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 650 - 741
Target Start/End: Original strand, 19642685 - 19642776
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacac 741  Q
    |||||||||||||||||||||| |   |||||| ||||| |||||| || ||||| || ||||| ||| ||| || |||||| |||||||||    
T  19642685 tattgctttgatttttgtgtcaatgcttcattttctttgcaaaattgtggttgtctcaaaagttctcatataaatggatgtttaaataacac 19642776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 650 - 717
Target Start/End: Original strand, 39147853 - 39147920
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtca 717  Q
    ||||| |||||||||||||||| || |||||||  |||||||| || |||||||| || |||||||||    
T  39147853 tattgttttgatttttgtgtcaatacctcattttttttgtaaatttatgattgtcccaaaagttgtca 39147920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 691 - 746
Target Start/End: Original strand, 42434247 - 42434302
Alignment:
Q  691 aaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactc 746  Q
    |||||||||| ||| || ||||||||| ||| ||||||||||||||||||| ||||    
T  42434247 aaattttgatcgtctcaaaagttgtcatataaatagatgttcaaataacacaactc 42434302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 711 - 748
Target Start/End: Original strand, 22416349 - 22416386
Alignment:
Q  711 gttgtcacatatatagatgttcaaataacacgactctt 748  Q
    |||||||||||||| |||||||||||||||| ||||||    
T  22416349 gttgtcacatatatggatgttcaaataacacaactctt 22416386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 650 - 691
Target Start/End: Complemental strand, 22446008 - 22445967
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaa 691  Q
    ||||||||| |||||||||||| || ||||||||||||||||    
T  22446008 tattgctttaatttttgtgtcaatacctcatttcctttgtaa 22445967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 650 - 707
Target Start/End: Complemental strand, 44287426 - 44287369
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcaca 707  Q
    ||||| |||| || ||||| ||| | ||||||||||||||||||||||| ||||||||    
T  44287426 tattgttttggttattgtgccacaacctcatttcctttgtaaaattttggttgtcaca 44287369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 75; Significance: 4e-34; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 650 - 752
Target Start/End: Original strand, 5114165 - 5114267
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactcttt 749  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| | || |||||||||| ||||||||||||||||||| |||||||    
T  5114165 tattgctttgatttttgtgtcactacctcattttctttgtaaaattttgattgtcataaaaattgtcacataaatagatgttcaaataacacaactcttt 5114264  T
Q  750 tca 752  Q
    |||    
T  5114265 tca 5114267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 650 - 746
Target Start/End: Complemental strand, 32924265 - 32924169
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactc 746  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||||||| ||||    
T  32924265 tattgctttggtttttgtgtcactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 32924169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 650 - 749
Target Start/End: Complemental strand, 27541486 - 27541387
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactcttt 749  Q
    |||||||||| |||||||| ||||| ||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||||||| |||||||    
T  27541486 tattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactcttt 27541387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 650 - 749
Target Start/End: Original strand, 38926715 - 38926814
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactcttt 749  Q
    |||||||||| |||||||||||||| || |||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||||| |||||||    
T  38926715 tattgctttggtttttgtgtcactaccttatttcctttgtaaaattttggttgtcacgaaagttgtcacatatatagatgttcaaataacacaactcttt 38926814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 650 - 741
Target Start/End: Complemental strand, 42358622 - 42358531
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacac 741  Q
    |||||||||||||||||||||| || ||||||||||||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  42358622 tattgctttgatttttgtgtcaatacctcatttcctttgcaaaattttgattgtcacaaaagttgtcacatatatggatgttcaaataacac 42358531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 650 - 747
Target Start/End: Original strand, 41309204 - 41309301
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactct 747  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||| || ||||||| |||||||||||||||| |||||    
T  41309204 tattgctttgatttttgtgtcactacctcattttctttgtaaaattttgattgtcacaaaagttatcgcatatatggatgttcaaataacacaactct 41309301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 650 - 746
Target Start/End: Complemental strand, 37503731 - 37503635
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactc 746  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||||| |||||||| ||||| ||||||||||| ||||||||||||||| ||||    
T  37503731 tattgctttgatttttgtgtcaatatctcatttcctttgcaaaattttggttgtcacaaaagttatcacatatataaatgttcaaataacacaactc 37503635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 650 - 746
Target Start/End: Complemental strand, 42357068 - 42356972
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactc 746  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||| || ||||||||||||| |||||||||||||||| ||||    
T  42357068 tattgctttggtttttgtgtcactacctcatttcctttgtaaaattttggttgtcacaaaaattgtcacatatatggatgttcaaataacacaactc 42356972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 650 - 750
Target Start/End: Original strand, 44856040 - 44856140
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactcttt 749  Q
    |||| |||||||||||||| ||||| ||||||||||||||||||||||| |||||| | |||||||||||||||| |||||||||||||||| |||||||    
T  44856040 tatttctttgatttttgtgccactacctcatttcctttgtaaaattttggttgtcatacaagttgtcacatatatggatgttcaaataacacaactcttt 44856139  T
Q  750 t 750  Q
    |    
T  44856140 t 44856140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 650 - 747
Target Start/End: Original strand, 52939738 - 52939835
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactct 747  Q
    |||||||||| |||||||| ||||| ||||||||||||||||||||||| |||||||  |||||||||||||||| |||||||||||||||| |||||    
T  52939738 tattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacgaaagttgtcacatatatggatgttcaaataacacaactct 52939835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 650 - 746
Target Start/End: Original strand, 288813 - 288909
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactc 746  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||  ||||||||||||||| ||| |||||||||||| ||||    
T  288813 tattgctttggtttttgtgtcactatctcatttcttttgtaaaattttgattgttacaatagttgtcacatatatggattttcaaataacacaactc 288909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 650 - 746
Target Start/End: Original strand, 19149077 - 19149173
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactc 746  Q
    ||||| |||| |||||||| ||||| |||||||||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||| ||||    
T  19149077 tattgttttggtttttgtgccactaactcatttcctttgtaaaattttgattgtcacaaaaattgtcacatatatggatgttcaaataacacaactc 19149173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 650 - 746
Target Start/End: Complemental strand, 44413379 - 44413283
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactc 746  Q
    |||||||| | |||||||| || || |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  44413379 tattgcttcggtttttgtgccaatacctcatttcctttgtaaaattttaattgtcacaaaagttgtcacatatatagatgttcaaataacacaactc 44413283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 650 - 741
Target Start/End: Original strand, 5244316 - 5244407
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacac 741  Q
    |||||||||| |||||||| ||||| ||||||||||||||||||||||| |||||||| || |||||||||||||| |||||||||||||||    
T  5244316 tattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaaattgtcacatatataaatgttcaaataacac 5244407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 650 - 741
Target Start/End: Complemental strand, 24256755 - 24256664
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacac 741  Q
    ||||| |||||||||||| ||| || |||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||||||||||    
T  24256755 tattgttttgatttttgtatcaatacctcatttcctttgtaaaattttaattgtcacaaaagttgtcacatatatagattttcaaataacac 24256664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 650 - 749
Target Start/End: Original strand, 33939325 - 33939424
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactcttt 749  Q
    |||||||||| ||||||||||||||  |||||||||||| | ||||||| |||||||| |||||||||||||||| |||||||||||||||| |||||||    
T  33939325 tattgctttggtttttgtgtcactacttcatttcctttgaataattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactcttt 33939424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 661 - 740
Target Start/End: Original strand, 47472427 - 47472506
Alignment:
Q  661 tttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataaca 740  Q
    |||||||| ||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  47472427 tttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatagatgttcaaataaca 47472506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 650 - 748
Target Start/End: Original strand, 44813223 - 44813321
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactctt 748  Q
    |||||||| | |||||||| ||||| || |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| |||| ||||||    
T  44813223 tattgcttgggtttttgtgccactacctaatttcctttgtaaaattttgattgccacaaaagttgtcacatatatagatgttcaaatcacacaactctt 44813321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 650 - 748
Target Start/End: Original strand, 46623994 - 46624092
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactctt 748  Q
    ||||| |||| |||||||||||||| ||||||| |||||||||||||||||||||||| ||||| |||||| ||| |||||||||||||||| ||||||    
T  46623994 tattgttttggtttttgtgtcactacctcattttctttgtaaaattttgattgtcacaaaagttatcacatgtatggatgttcaaataacacaactctt 46624092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 650 - 747
Target Start/End: Complemental strand, 52254122 - 52254025
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactct 747  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||  |||||||| || ||||||||||||| ||||||||||| |||| |||||    
T  52254122 tattgctttggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattgtcacatatatggatgttcaaatgacacaactct 52254025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 650 - 746
Target Start/End: Complemental strand, 16969550 - 16969454
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactc 746  Q
    ||||| |||||||||| || ||||| ||||||||||||||||||||||  |||||||| |||||||||||||||| |||||||||||||||| ||||    
T  16969550 tattgttttgatttttatgccactacctcatttcctttgtaaaattttagttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 16969454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 650 - 746
Target Start/End: Complemental strand, 36670998 - 36670902
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactc 746  Q
    |||||||||| |||||||| ||||| |||||||| |||||||||||||| |||||||| ||||| |||||||||| |||||||||||||||| ||||    
T  36670998 tattgctttggtttttgtgccactacctcatttcatttgtaaaattttggttgtcacaaaagttatcacatatatggatgttcaaataacacaactc 36670902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 650 - 749
Target Start/End: Complemental strand, 31157661 - 31157562
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactcttt 749  Q
    ||||| ||||||||||||  || || || |||||||||||||||||||||| |||||||||||| |||||||||| |||||||||||||||| |||||||    
T  31157661 tattgttttgatttttgtaccaatacctaatttcctttgtaaaattttgatagtcacagaagttatcacatatatggatgttcaaataacacaactcttt 31157562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 653 - 747
Target Start/End: Complemental strand, 55151698 - 55151604
Alignment:
Q  653 tgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactct 747  Q
    ||||||| ||||||||||| ||  ||||||||||||||||||||| ||||| ||| ||||||||||||||||| ||||||||||||||| |||||    
T  55151698 tgctttggtttttgtgtcaatacttcatttcctttgtaaaattttaattgtaacaaaagttgtcacatatataaatgttcaaataacacaactct 55151604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 650 - 723
Target Start/End: Complemental strand, 20547974 - 20547901
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatata 723  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||| |||||||||||||||    
T  20547974 tattgctttgatttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatata 20547901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 650 - 746
Target Start/End: Original strand, 7934062 - 7934157
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactc 746  Q
    |||||||||| ||||| |||||||||||||| ||||||||||||||||  |||||||| || ||||||||||||| |||||||||||||||| ||||    
T  7934062 tattgctttggttttt-tgtcactatctcatatcctttgtaaaattttagttgtcacaaaaattgtcacatatatggatgttcaaataacacaactc 7934157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 650 - 750
Target Start/End: Original strand, 35597249 - 35597349
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactcttt 749  Q
    ||||| |||| |||||||||||||| ||| ||||||||||||||||||| |||||||| ||||||||||||||||  || |||||||||||| ||| |||    
T  35597249 tattgttttggtttttgtgtcactacctcgtttcctttgtaaaattttggttgtcacaaaagttgtcacatatatgaatattcaaataacacaacttttt 35597348  T
Q  750 t 750  Q
    |    
T  35597349 t 35597349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 650 - 749
Target Start/End: Original strand, 37302633 - 37302732
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactcttt 749  Q
    |||| ||||| |||||||| ||||| ||||||||||||| |||||||||||||||||| ||||||||| || ||| ||||||||||||| || |||||||    
T  37302633 tattactttggtttttgtgccactacctcatttcctttgcaaaattttgattgtcacaaaagttgtcaaatgtatggatgttcaaataagacaactcttt 37302732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 669 - 746
Target Start/End: Original strand, 13735836 - 13735913
Alignment:
Q  669 tcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactc 746  Q
    |||||| ||||||||||||| ||||||||| |||||||| |||||||||||||||| |||||||||||||||| ||||    
T  13735836 tcactacctcatttcctttgcaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 13735913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 650 - 746
Target Start/End: Original strand, 26014899 - 26014995
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactc 746  Q
    ||||| |||| |||||||| |  || ||||||||||||||||||||||| |||||||| |||||||||||| |||||||||| ||||||||| ||||    
T  26014899 tattgttttggtttttgtgcccttacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatgtatagatgtttaaataacacaactc 26014995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 676 - 748
Target Start/End: Original strand, 52326132 - 52326204
Alignment:
Q  676 ctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactctt 748  Q
    |||||||||||||||||||||||||||||| | ||||||||| |||||| |||||||||||||||| ||||||    
T  52326132 ctcatttcctttgtaaaattttgattgtcataaaagttgtcatatatatggatgttcaaataacacaactctt 52326204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 650 - 748
Target Start/End: Complemental strand, 35377065 - 35376967
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactctt 748  Q
    ||||||||||||||||||| || ||  |||||| ||||||||||||||| |||||||| |||||||||  || || |||||||||||||||| ||||||    
T  35377065 tattgctttgatttttgtgccaatacatcattttctttgtaaaattttggttgtcacaaaagttgtcatctaaatggatgttcaaataacacaactctt 35376967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 650 - 750
Target Start/End: Complemental strand, 7668171 - 7668072
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactcttt 749  Q
    |||||||||| ||||| || |||||||| |||||||| | ||||||||| |||||||| |||||||||||| ||| |||||||||||||||| | |||||    
T  7668171 tattgctttggtttttatgccactatcttatttcctt-gcaaaattttggttgtcacaaaagttgtcacatgtatggatgttcaaataacacaattcttt 7668073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 660 - 748
Target Start/End: Original strand, 44383286 - 44383374
Alignment:
Q  660 atttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactctt 748  Q
    |||||||||||| || ||||||| |||| |||||||||||||||| || ||||||||| ||| || |||||||||||||||| ||||||    
T  44383286 atttttgtgtcaatacctcattttctttataaaattttgattgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 44383374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 650 - 749
Target Start/End: Complemental strand, 13348118 - 13348019
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactcttt 749  Q
    |||||||||| ||||||| ||| || ||||||| ||||||||||||||| ||||| || ||||||||| ||| || |||||||||||||||  |||||||    
T  13348118 tattgctttggtttttgtatcaatacctcattttctttgtaaaattttggttgtcccaaaagttgtcatataaatggatgttcaaataacataactcttt 13348019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 658 - 756
Target Start/End: Original strand, 44445389 - 44445487
Alignment:
Q  658 tgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactcttttcacaat 756  Q
    |||||||||||  | |||||||||| |||| |||||||||| |||||| | ||||||| |||||||| |||||||||||||||  |||||||| |||||    
T  44445389 tgatttttgtgcaaatatctcattttctttataaaattttggttgtcataaaagttgttacatatatcgatgttcaaataacataactctttttacaat 44445487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 650 - 707
Target Start/End: Original strand, 41505578 - 41505635
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcaca 707  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||    
T  41505578 tattgctttggtttttgtgtcactacctcatttcctttgtaaaattttggttgtcaca 41505635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 650 - 707
Target Start/End: Complemental strand, 44413906 - 44413849
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcaca 707  Q
    |||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||    
T  44413906 tattgctttggtttttgtgtcaatatctcattttctttgtaaaattttgattgtcaca 44413849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 650 - 741
Target Start/End: Original strand, 8847197 - 8847287
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacac 741  Q
    ||||| |||| |||||||| || || |||||||  ||||||||||||||||| ||||| ||||||| |||||||| ||||||||||||||||    
T  8847197 tattgttttggtttttgtgccaatacctcattttatttgtaaaattttgattatcacaaaagttgt-acatatatggatgttcaaataacac 8847287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 661 - 748
Target Start/End: Original strand, 21217610 - 21217697
Alignment:
Q  661 tttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactctt 748  Q
    ||||||||||| || ||||||| |||| |||||||||| ||||| || ||||||||| ||| || |||||||||||||||| ||||||    
T  21217610 tttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 21217697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 661 - 748
Target Start/End: Complemental strand, 37057030 - 37056943
Alignment:
Q  661 tttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactctt 748  Q
    ||||||||||| || ||||||| ||||||||||| ||| ||||| || ||||||||| ||| || |||||||||||||||| ||||||    
T  37057030 tttttgtgtcaatacctcattttctttgtaaaatattggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 37056943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 661 - 741
Target Start/End: Original strand, 23592556 - 23592636
Alignment:
Q  661 tttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacac 741  Q
    ||||||||||| || ||||||| |||| |||||||||| ||||| || ||||||||| ||| || ||||||||||||||||    
T  23592556 tttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacac 23592636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 650 - 741
Target Start/End: Complemental strand, 35201418 - 35201327
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacac 741  Q
    ||||| |||| ||||||||||| ||||| |||| ||||||| |||||| |||||| || |||||||||  || || ||||||||||||||||    
T  35201418 tattgttttggtttttgtgtcaatatcttattttctttgtataattttaattgtctcaaaagttgtcatttaaatggatgttcaaataacac 35201327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 655 - 741
Target Start/End: Original strand, 44463449 - 44463535
Alignment:
Q  655 ctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacac 741  Q
    ||||||||||||| ||| |||| ||||| |||||||||||||||||| || || ||||| ||| |||  | ||||||||||||||||    
T  44463449 ctttgatttttgtatcaatatcacattttctttgtaaaattttgattatctcaaaagttatcatataatttgatgttcaaataacac 44463535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 662 - 707
Target Start/End: Complemental strand, 50318361 - 50318316
Alignment:
Q  662 ttttgtgtcactatctcatttcctttgtaaaattttgattgtcaca 707  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||||    
T  50318361 ttttgtgccactatctcatttcctttgtaaaattttggttgtcaca 50318316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 652 - 746
Target Start/End: Original strand, 42889074 - 42889168
Alignment:
Q  652 ttgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactc 746  Q
    |||||||| |||||||| || || ||||||| ||||||||||||||| || |  || |||||||||  || ||||||||| ||||||||| ||||    
T  42889074 ttgctttggtttttgtgccaataactcattttctttgtaaaattttggttatatcaaaagttgtcatctaaatagatgtttaaataacacaactc 42889168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 656 - 704
Target Start/End: Complemental strand, 14226683 - 14226635
Alignment:
Q  656 tttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtc 704  Q
    |||| ||||||||||| ||| |||||| |||||||||||||||||||||    
T  14226683 tttggtttttgtgtcaatatttcattttctttgtaaaattttgattgtc 14226635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 677 - 741
Target Start/End: Original strand, 23600707 - 23600771
Alignment:
Q  677 tcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacac 741  Q
    |||||| |||| |||||||||| ||||| || ||||||||| ||| || ||||||||||||||||    
T  23600707 tcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacac 23600771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 650 - 698
Target Start/End: Original strand, 45000150 - 45000198
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttg 698  Q
    ||||| |||| |||||||| ||||| |||||||||||||||||||||||    
T  45000150 tattgatttggtttttgtgccactacctcatttcctttgtaaaattttg 45000198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 661 - 750
Target Start/End: Complemental strand, 25641556 - 25641467
Alignment:
Q  661 tttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactctttt 750  Q
    |||||||| || || || |||| || ||||||| |||| ||||| || ||||||||| ||| || ||||||||||||| || ||||||||    
T  25641556 tttttgtgccaataccttattttctatgtaaaactttggttgtctcaaaagttgtcatataaatggatgttcaaataatacaactctttt 25641467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 73; Significance: 7e-33; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 650 - 746
Target Start/End: Original strand, 39440571 - 39440667
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactc 746  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||  ||||||||||||||| ||||    
T  39440571 tattgctttgatttttgtgtcactacctcatttcctttctaaaattttgattgtcacaaaagttgtcacatatatgaatgttcaaataacacaactc 39440667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 650 - 748
Target Start/End: Original strand, 26492094 - 26492192
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactctt 748  Q
    |||||||||| |||||||| |||||  ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||| ||||||    
T  26492094 tattgctttggtttttgtgccactacttcatttcctttgtaaaattttgattgtcacaaaaattgtcacatatatagatgttcaaataacacaactctt 26492192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 650 - 746
Target Start/End: Complemental strand, 38376474 - 38376378
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactc 746  Q
    |||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||| || || ||||||||||||||||||||||||||| ||||    
T  38376474 tattactttgatttttgtgccactatctcattttctttgtaaaattttgattgtcacaaaaattatcacatatatagatgttcaaataacacaactc 38376378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 654 - 746
Target Start/End: Original strand, 43175075 - 43175167
Alignment:
Q  654 gctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactc 746  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||||||||| ||||    
T  43175075 gctttggtttttgtgtcactacctcatttcctttgtaaaattttgattatcacaaaagttgtcacatatatggatgttcaaataacacaactc 43175167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 650 - 750
Target Start/End: Original strand, 51986129 - 51986229
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactcttt 749  Q
    |||| ||||| |||||||| ||||| ||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||||||| |||||||    
T  51986129 tatttctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactcttt 51986228  T
Q  750 t 750  Q
    |    
T  51986229 t 51986229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 650 - 748
Target Start/End: Complemental strand, 23369316 - 23369218
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactctt 748  Q
    |||||||||| |||||||| ||||| |||||||||||||||| |||||| |||||||| |||||||||||||||| |||||||||||||||| ||||||    
T  23369316 tattgctttggtttttgtgccactacctcatttcctttgtaagattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactctt 23369218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 650 - 748
Target Start/End: Original strand, 44539821 - 44539919
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactctt 748  Q
    |||||||||| |||||||| ||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||  ||||||||||||||| ||||||    
T  44539821 tattgctttggtttttgtgacactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaactctt 44539919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 650 - 746
Target Start/End: Complemental strand, 53801743 - 53801647
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactc 746  Q
    |||||||||  ||||||||||| || ||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||||||| ||||    
T  53801743 tattgctttagtttttgtgtcaatacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 53801647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 650 - 741
Target Start/End: Original strand, 11068775 - 11068866
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacac 741  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||| ||| |||| ||||||||||||||||  |||||||||||||||    
T  11068775 tattgctttgatttttgtgtcactgcctcatttcctttgtaaaattttggttgccacaaaagttgtcacatatatgaatgttcaaataacac 11068866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 650 - 741
Target Start/End: Complemental strand, 24575835 - 24575744
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacac 741  Q
    |||||||||| |||||||| || || |||||||||||| |||||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  24575835 tattgctttggtttttgtgccaatacctcatttcctttataaaattttggttgtcacaaaagttgtcacatatatagatgttcaaataacac 24575744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 650 - 749
Target Start/End: Original strand, 26732312 - 26732411
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactcttt 749  Q
    ||||| |||| |||||||| ||||| ||||||| ||||||||||||||| |||||||| |||||||||||||||| |||||||||||||||| |||||||    
T  26732312 tattgttttggtttttgtgccactacctcattttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactcttt 26732411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 650 - 747
Target Start/End: Original strand, 27965074 - 27965169
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactct 747  Q
    |||||||||| |||||||||||||| ||||||||| ||  ||||||||| ||||||||||||||||||||||||| |||||||||||||||| |||||    
T  27965074 tattgctttggtttttgtgtcactacctcatttccatt--aaaattttggttgtcacagaagttgtcacatatatggatgttcaaataacacaactct 27965169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 650 - 748
Target Start/End: Original strand, 37297136 - 37297233
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactctt 748  Q
    |||||||||| |||||||||||||| ||||||||||| ||||||||||| |||||||| ||||||||| |||||| |||||||||||||||| ||||||    
T  37297136 tattgctttggtttttgtgtcactacctcatttcctt-gtaaaattttggttgtcacaaaagttgtcaaatatatggatgttcaaataacacaactctt 37297233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 652 - 749
Target Start/End: Original strand, 29175314 - 29175411
Alignment:
Q  652 ttgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactcttt 749  Q
    |||||||| ||||||||||| || ||||||| ||||||||||||||| |||||||| ||||||||||||||||  ||||||||||||||| |||||||    
T  29175314 ttgctttggtttttgtgtcaatagctcatttactttgtaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaactcttt 29175411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 651 - 749
Target Start/End: Complemental strand, 31641548 - 31641450
Alignment:
Q  651 attgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactcttt 749  Q
    |||||||||||||||||||||||| || ||||||||| |||||||||| |||||||| ||||| |||| |||||  ||||||||||||||| |||||||    
T  31641548 attgctttgatttttgtgtcactaccttatttcctttataaaattttggttgtcacaaaagttatcacgtatatgaatgttcaaataacacaactcttt 31641450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 650 - 747
Target Start/End: Complemental strand, 26724956 - 26724859
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactct 747  Q
    ||||| |||| |||||||||||||| ||||||||||||||||||||||  |||| ||| ||||| |||||||||| |||||||||||||||| |||||    
T  26724956 tattgttttggtttttgtgtcactacctcatttcctttgtaaaattttagttgttacaaaagttatcacatatatggatgttcaaataacacaactct 26724859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 650 - 751
Target Start/End: Original strand, 37997341 - 37997442
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactcttt 749  Q
    |||||||||||||||||||||| || ||||||| ||||||||||||||| |||| ||| || || ||||||||||||||||||||||| |||  ||||||    
T  37997341 tattgctttgatttttgtgtcaatacctcattttctttgtaaaattttggttgtaacaaaaattatcacatatatagatgttcaaatagcacagctcttt 37997440  T
Q  750 tc 751  Q
    ||    
T  37997441 tc 37997442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 650 - 741
Target Start/End: Complemental strand, 10250499 - 10250408
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacac 741  Q
    |||||||||| |||||||| |||||  |||||| ||||||||||||||| |||||||| |||||||| ||||||| ||||||||||||||||    
T  10250499 tattgctttggtttttgtgccactacttcattttctttgtaaaattttggttgtcacaaaagttgtcgcatatatggatgttcaaataacac 10250408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 650 - 741
Target Start/End: Complemental strand, 27051070 - 27050979
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacac 741  Q
    ||||| |||| ||||||||||| |||||||||| ||||||||||||||| |||||||| |||||||||||| |||  |||||||||||||||    
T  27051070 tattgttttggtttttgtgtcaatatctcattttctttgtaaaattttggttgtcacaaaagttgtcacatttatgaatgttcaaataacac 27050979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 650 - 747
Target Start/End: Original strand, 5622545 - 5622642
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactct 747  Q
    |||||||||| ||||||||  |||| ||||||||||||||||||||||  || ||||| ||||||| |||||||||||| |||||||||||| |||||    
T  5622545 tattgctttggtttttgtgcaactacctcatttcctttgtaaaattttagttatcacaaaagttgtgacatatatagatcttcaaataacacaactct 5622642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 650 - 747
Target Start/End: Original strand, 36177993 - 36178090
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactct 747  Q
    |||||||||| |||||||  ||||| |||||||||||| |||||||||  |||||||| ||||| ||||||||||| ||||||||||||||| |||||    
T  36177993 tattgctttggtttttgtaccactacctcatttcctttataaaattttagttgtcacaaaagttatcacatatataaatgttcaaataacacaactct 36178090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 661 - 748
Target Start/End: Original strand, 34616659 - 34616746
Alignment:
Q  661 tttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactctt 748  Q
    ||||||||||| |||||||||| |||| |||||||||| ||||| || ||||||||| ||| ||||||||||||||||||| ||||||    
T  34616659 tttttgtgtcaatatctcattttctttataaaattttggttgtctcaaaagttgtcatataaatagatgttcaaataacacaactctt 34616746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 650 - 748
Target Start/End: Complemental strand, 2575774 - 2575676
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactctt 748  Q
    |||||||||| ||| ||||||| | |||||||| |||||||||| |||  |||||||| ||||||||| ||| ||||||||||||||||||| ||||||    
T  2575774 tattgctttggtttgtgtgtcaatctctcattttctttgtaaaactttagttgtcacaaaagttgtcatataaatagatgttcaaataacacaactctt 2575676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 650 - 748
Target Start/End: Original strand, 39478524 - 39478622
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactctt 748  Q
    |||| ||||||||||||||||| || ||||||| ||||||||||||||| |||||||| ||||||||| |||||| |||||| ||  ||||| ||||||    
T  39478524 tattactttgatttttgtgtcaatacctcattttctttgtaaaattttggttgtcacaaaagttgtcatatatatggatgtttaataaacacaactctt 39478622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 652 - 746
Target Start/End: Original strand, 46213059 - 46213153
Alignment:
Q  652 ttgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactc 746  Q
    |||||||| ||||||||  |||| ||||||||||||||||||||||| |||| ||| ||||| |||||||||| ||| |||||||||||| ||||    
T  46213059 ttgctttggtttttgtgcaactacctcatttcctttgtaaaattttggttgttacaaaagttttcacatatatggattttcaaataacacaactc 46213153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 650 - 738
Target Start/End: Original strand, 15175633 - 15175721
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataa 738  Q
    |||||||||  ||||||||  | || ||||||||||||||||||||||| |||| ||| |||||||||||||||| |||||||||||||    
T  15175633 tattgcttttgtttttgtgctaatacctcatttcctttgtaaaattttggttgtaacaaaagttgtcacatatatggatgttcaaataa 15175721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 650 - 738
Target Start/End: Original strand, 38134440 - 38134528
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataa 738  Q
    ||||| |||| |||||||||||||  ||||||||||||||||||||||| || ||||| |||||||||||| |||  ||||||||||||    
T  38134440 tattgttttggtttttgtgtcactgcctcatttcctttgtaaaattttggttatcacaaaagttgtcacatgtatgaatgttcaaataa 38134528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 650 - 718
Target Start/End: Original strand, 40348881 - 40348949
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcac 718  Q
    |||||||||| |||||||||||||||||||||| ||||  |||||||||||||||||| ||||||||||    
T  40348881 tattgctttggtttttgtgtcactatctcattttctttaaaaaattttgattgtcacaaaagttgtcac 40348949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 650 - 748
Target Start/End: Original strand, 39195144 - 39195242
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactctt 748  Q
    |||||||||| ||| |||| || | |||||||| |||||||||| ||||||| ||||| | ||||||| ||| ||||||||||||||||||| ||||||    
T  39195144 tattgctttggtttgtgtgccaatctctcattttctttgtaaaactttgattatcacaaatgttgtcatataaatagatgttcaaataacacaactctt 39195242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 650 - 748
Target Start/End: Original strand, 42853664 - 42853762
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactctt 748  Q
    |||||||||| ||||||||||| || ||||||| |||| |||||||||||||||| || || |||||||  | || |||||||||||||||| ||||||    
T  42853664 tattgctttggtttttgtgtcaatacctcattttctttataaaattttgattgtctcaaaaattgtcactcaaatggatgttcaaataacacaactctt 42853762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 661 - 748
Target Start/End: Original strand, 38382419 - 38382506
Alignment:
Q  661 tttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactctt 748  Q
    ||||||||||| || ||||||| |||| |||||||||| ||||| || ||||||||| ||| || |||||||||||||||| ||||||    
T  38382419 tttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 38382506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 661 - 748
Target Start/End: Original strand, 47181939 - 47182026
Alignment:
Q  661 tttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactctt 748  Q
    ||||||||||| || ||||||| |||| |||||||||| ||||| || ||||||||| ||| || |||||||||||||||| ||||||    
T  47181939 tttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 47182026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 661 - 748
Target Start/End: Complemental strand, 48402170 - 48402083
Alignment:
Q  661 tttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactctt 748  Q
    ||||||||||| || ||||||| |||| |||||||||| ||||| || ||||||||| ||| || |||||||||||||||| ||||||    
T  48402170 tttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 48402083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 650 - 707
Target Start/End: Complemental strand, 2268491 - 2268434
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcaca 707  Q
    ||||| |||| ||||||||||| |||||||||||||||||||||||||| ||||||||    
T  2268491 tattgttttggtttttgtgtcaatatctcatttcctttgtaaaattttggttgtcaca 2268434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 650 - 707
Target Start/End: Complemental strand, 29531590 - 29531533
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcaca 707  Q
    ||||| |||| |||||||||||||| ||||||||||||||||||||||| ||||||||    
T  29531590 tattgttttggtttttgtgtcactacctcatttcctttgtaaaattttggttgtcaca 29531533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 650 - 707
Target Start/End: Original strand, 46634187 - 46634244
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcaca 707  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||  ||||||||    
T  46634187 tattactttgatttttgtgtcactacctcatttcctttgtaaaattttagttgtcaca 46634244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 650 - 707
Target Start/End: Complemental strand, 50608608 - 50608551
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcaca 707  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||||  ||||||||    
T  50608608 tattactttgatttttgtgtcaatatctcatttcctttgtaaaattttagttgtcaca 50608551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 650 - 741
Target Start/End: Complemental strand, 11672107 - 11672016
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacac 741  Q
    |||||||||||||||||||||| ||  | |||| |||| ||||||||| | ||||||| ||||||| | ||| |||||| ||||||||||||    
T  11672107 tattgctttgatttttgtgtcaataatttattttctttataaaattttaagtgtcacaaaagttgtaatataaatagattttcaaataacac 11672016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 677 - 740
Target Start/End: Original strand, 45083086 - 45083149
Alignment:
Q  677 tcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataaca 740  Q
    |||||| |||| ||||||||||||||| | | |||||||||||||||| |||||||||||||||    
T  45083086 tcattttctttataaaattttgattgtaataaaagttgtcacatatatggatgttcaaataaca 45083149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 684 - 746
Target Start/End: Complemental strand, 5233620 - 5233558
Alignment:
Q  684 ctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactc 746  Q
    ||||||||||||||||||||  || ||||||| ||||| ||||||||||||||||||| ||||    
T  5233620 ctttgtaaaattttgattgtttcaaaagttgttacataaatagatgttcaaataacacaactc 5233558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 656 - 750
Target Start/End: Complemental strand, 19473934 - 19473840
Alignment:
Q  656 tttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactctttt 750  Q
    |||| ||||||||||| ||  |||||| ||||||||||||||||||||| || ||||||||| ||| ||  || |||||||||||| | ||||||    
T  19473934 tttggtttttgtgtcaatacttcattttctttgtaaaattttgattgtctcaaaagttgtcatataaatgcatcttcaaataacacaaatctttt 19473840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 662 - 748
Target Start/End: Complemental strand, 56364017 - 56363931
Alignment:
Q  662 ttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactctt 748  Q
    |||||||||| || ||||||| |||| |||||||||| ||||| || |||||||||  || || |||||||||||||||| ||||||    
T  56364017 ttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgtcatgtaaatggatgttcaaataacacaactctt 56363931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 650 - 748
Target Start/End: Original strand, 39654911 - 39655009
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactctt 748  Q
    |||||||||||||||||||||| || ||||||| ||||||||| || || |||||  | || || |||  || |||| |||||||||||||| ||||||    
T  39654911 tattgctttgatttttgtgtcaatacctcattttctttgtaaatttatggttgtcttaaaaattatcatctaaatagttgttcaaataacacaactctt 39655009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 677 - 738
Target Start/End: Original strand, 39606086 - 39606147
Alignment:
Q  677 tcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataa 738  Q
    ||||||||||| |||||||||| || ||  | ||||||||||||||||| ||||||||||||    
T  39606086 tcatttcctttataaaattttggttatcgtaaaagttgtcacatatataaatgttcaaataa 39606147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 650 - 747
Target Start/End: Complemental strand, 50831739 - 50831642
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactct 747  Q
    ||||||||||||||||||||||  | ||| ||| |||||||||||| || ||||| || |||||||||   | || | |||||||||||||| |||||    
T  50831739 tattgctttgatttttgtgtcaagacctctttttctttgtaaaattatggttgtcccaaaagttgtcaatcaaatggttgttcaaataacacaactct 50831642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 650 - 746
Target Start/End: Complemental strand, 7632445 - 7632349
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactc 746  Q
    ||||||||||||||||||| || |  |||||||  |||||||||||||| ||||  || | ||||||| ||| |  |||||||||||||||| ||||    
T  7632445 tattgctttgatttttgtgccaatcactcattttatttgtaaaattttggttgttgcaaaggttgtcatataaaatgatgttcaaataacacaactc 7632349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 664 - 743
Target Start/End: Original strand, 39447848 - 39447926
Alignment:
Q  664 ttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacga 743  Q
    |||||||| || ||||||| |||||||||||||||||| || ||| |||| ||||||| || | ||||| ||||||||||    
T  39447848 ttgtgtcaatacctcattttctttgtaaaattttgattatctcag-agttatcacataaatggttgttcgaataacacga 39447926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 650 - 741
Target Start/End: Complemental strand, 56474751 - 56474660
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacac 741  Q
    ||||| |||| ||||||||||| || ||||||| ||||||||| ||||| ||||| || || |||| |  |  |||||||||||||||||||    
T  56474751 tattgttttggtttttgtgtcaatacctcattttctttgtaaagttttggttgtctcaaaaattgttatgtgaatagatgttcaaataacac 56474660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 653 - 747
Target Start/End: Complemental strand, 50721725 - 50721631
Alignment:
Q  653 tgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactct 747  Q
    ||||||| ||||||||||| |  ||||||| ||||||||||||||  ||||  || | ||||||| ||| |  |||||||||||||||| |||||    
T  50721725 tgctttggtttttgtgtcaatcactcattttctttgtaaaattttagttgttgcaaaggttgtcatataaaatgatgttcaaataacacaactct 50721631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 650 - 696
Target Start/End: Original strand, 51255834 - 51255880
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattt 696  Q
    ||||||||||||||||||| |||||||| | || |||||||||||||    
T  51255834 tattgctttgatttttgtgccactatctaaatttctttgtaaaattt 51255880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 711 - 748
Target Start/End: Complemental strand, 2268442 - 2268405
Alignment:
Q  711 gttgtcacatatatagatgttcaaataacacgactctt 748  Q
    |||||||||||||| |||||||||||||||| ||||||    
T  2268442 gttgtcacatatatggatgttcaaataacacaactctt 2268405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 685 - 738
Target Start/End: Original strand, 3316476 - 3316529
Alignment:
Q  685 tttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataa 738  Q
    |||||||||||||||||||| || |||||||||  || || |||||||||||||    
T  3316476 tttgtaaaattttgattgtctcaaaagttgtcatctaaatggatgttcaaataa 3316529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 650 - 746
Target Start/End: Complemental strand, 26908067 - 26907970
Alignment:
Q  650 tattgctttgattttt-gtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactc 746  Q
    |||||||||||||||| |||| ||||  |||||   ||| ||||||||| ||||||| | || || |||||||||| ||| |||||||||||| ||||    
T  26908067 tattgctttgattttttgtgttactacttcattatttttataaaattttaattgtcataaaaattatcacatatatggatattcaaataacacaactc 26907970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 709 - 746
Target Start/End: Complemental strand, 53786140 - 53786103
Alignment:
Q  709 aagttgtcacatatatagatgttcaaataacacgactc 746  Q
    |||||||||||||||| |||||||||||||||| ||||    
T  53786140 aagttgtcacatatatggatgttcaaataacacaactc 53786103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 69; Significance: 2e-30; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 650 - 746
Target Start/End: Complemental strand, 4054270 - 4054174
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactc 746  Q
    |||||||||| |||||||||||||| |||||||| |||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||| ||||    
T  4054270 tattgctttggtttttgtgtcactacctcatttcatttgtaaagttttgattgtcacaaaagttgtcacatatataaatgttcaaataacacaactc 4054174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 650 - 740
Target Start/End: Complemental strand, 12898913 - 12898823
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataaca 740  Q
    |||||||||| |||||| | ||||||||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||||||    
T  12898913 tattgctttggtttttgcgccactatctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataaca 12898823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 650 - 748
Target Start/End: Original strand, 27325845 - 27325943
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactctt 748  Q
    |||||||||| |||||||| ||||| |||||||||||||||||||||||||| ||||  |||||||||||||||| |||||||||||||||| ||||||    
T  27325845 tattgctttggtttttgtgccactacctcatttcctttgtaaaattttgattatcacgaaagttgtcacatatatggatgttcaaataacacaactctt 27325943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 650 - 747
Target Start/End: Original strand, 34186694 - 34186791
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactct 747  Q
    |||| ||||| |||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||| ||| |||||||||||||||| |||||    
T  34186694 tattactttggtttttgtgtcactacctcatttcctttgcaaaattttgattgtcacaaaagttgtcacatgtatggatgttcaaataacacaactct 34186791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 650 - 746
Target Start/End: Original strand, 7271937 - 7272033
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactc 746  Q
    |||||||||| ||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||||| ||| |||||||| ||||||| ||||    
T  7271937 tattgctttggtttttgtgtcactatctcatttcttttgcaaaattttgattgtcacaaaagttgtcacatgtatggatgttcatataacacaactc 7272033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 650 - 741
Target Start/End: Complemental strand, 32501180 - 32501089
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacac 741  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||| || || |||||||||| ||||||||||||||||    
T  32501180 tattactttgatttttgtgtcactacctcatttcctttgtaaaattttggttgtcacaaaaattctcacatatatggatgttcaaataacac 32501089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 650 - 750
Target Start/End: Complemental strand, 37449409 - 37449309
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactcttt 749  Q
    |||||||||| ||||||||  |||| |||||||||||||||||||||||||| ||||| ||||| |||||||||| ||| |||||||||||| |||||||    
T  37449409 tattgctttggtttttgtgctactacctcatttcctttgtaaaattttgattatcacaaaagttatcacatatatggatattcaaataacacaactcttt 37449310  T
Q  750 t 750  Q
    |    
T  37449309 t 37449309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 661 - 740
Target Start/End: Complemental strand, 5277472 - 5277393
Alignment:
Q  661 tttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataaca 740  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| || ||||||||| ||| |||||||||||||||    
T  5277472 tttttgtgtcactacctcatttcctttgtaaaattttgattgtcacataaattgtcacatgtatggatgttcaaataaca 5277393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 650 - 741
Target Start/End: Complemental strand, 36816600 - 36816509
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacac 741  Q
    |||||||||||||||||||| | ||  |||||| ||||| |||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  36816600 tattgctttgatttttgtgttaatacgtcattttctttgcaaaattttgattatcacaaaagttgtcacatatatagatgttcaaataacac 36816509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 662 - 740
Target Start/End: Original strand, 36251425 - 36251503
Alignment:
Q  662 ttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataaca 740  Q
    ||||||||||||| |||||||||||||||||||||||||||||||  ||||| |||||||||| |||||||||||||||    
T  36251425 ttttgtgtcactacctcatttcctttgtaaaattttgattgtcacgaaagttatcacatatatggatgttcaaataaca 36251503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 650 - 746
Target Start/End: Original strand, 42768291 - 42768387
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactc 746  Q
    |||||||||| |||||||||||||  ||||||||||||||||||||||  |||||||| || || |||||||||| |||||||||||||||| ||||    
T  42768291 tattgctttggtttttgtgtcactgcctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacacaactc 42768387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 650 - 749
Target Start/End: Complemental strand, 37133846 - 37133747
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactcttt 749  Q
    |||||||||||||||||||||| ||| |||||| ||||||||||||||| |||||||| |||||||||  || || |||||| ||||||||| |||||||    
T  37133846 tattgctttgatttttgtgtcaatatatcattttctttgtaaaattttggttgtcacaaaagttgtcatctaaatggatgttaaaataacacaactcttt 37133747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 650 - 747
Target Start/End: Complemental strand, 11253526 - 11253429
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactct 747  Q
    |||||||||| ||||||||||| || ||||||| ||||||||||||||| | |||||| ||||||||| || ||||||||||||||||| || |||||    
T  11253526 tattgctttggtttttgtgtcaatacctcattttctttgtaaaattttggtcgtcacaaaagttgtcatatttatagatgttcaaataatacaactct 11253429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 650 - 746
Target Start/End: Original strand, 22719527 - 22719623
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactc 746  Q
    |||||||||| ||||||||  |||| ||||||| ||||||||||||||| || ||||| |||||||||||||||| | |||||||||||||| ||||    
T  22719527 tattgctttggtttttgtgcaactacctcattttctttgtaaaattttggttatcacaaaagttgtcacatatatggctgttcaaataacacaactc 22719623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 650 - 750
Target Start/End: Original strand, 43397868 - 43397968
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactcttt 749  Q
    |||| ||||| |||||||| ||||||||||||| ||||||||||||||| |||||||| ||| |||||||| ||| ||||||||| ||||||  ||||||    
T  43397868 tattactttggtttttgtgccactatctcattttctttgtaaaattttggttgtcacaaaagctgtcacatgtatggatgttcaattaacacatctcttt 43397967  T
Q  750 t 750  Q
    |    
T  43397968 t 43397968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 650 - 747
Target Start/End: Original strand, 29025347 - 29025444
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactct 747  Q
    |||||||||| ||||||||||| || ||||||| ||||||||||||||| ||||| || ||||||||| ||| || |||||| ||||||||| |||||    
T  29025347 tattgctttggtttttgtgtcaatacctcattttctttgtaaaattttggttgtcccaaaagttgtcatataaatggatgtttaaataacacaactct 29025444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 650 - 741
Target Start/End: Complemental strand, 36660434 - 36660343
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacac 741  Q
    |||||||||| || |||||||| ||  |||||| |||| ||||||||||||||||||| ||||| |||||| ||| ||||||||||||||||    
T  36660434 tattgctttggttattgtgtcaatacttcattttctttataaaattttgattgtcacaaaagttatcacatttatggatgttcaaataacac 36660343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 650 - 707
Target Start/End: Original strand, 10731633 - 10731690
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcaca 707  Q
    |||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||    
T  10731633 tattgctttgatttttgtgtcaatacttcatttcctttgtaaaattttgattgtcaca 10731690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 683 - 747
Target Start/End: Original strand, 10692551 - 10692615
Alignment:
Q  683 cctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactct 747  Q
    ||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||| || |||||    
T  10692551 cctttgtaaaattttgattgtcagagaagttgacacatatatggatgttcaaataatacaactct 10692615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 663 - 747
Target Start/End: Original strand, 24479323 - 24479407
Alignment:
Q  663 tttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactct 747  Q
    ||||||||| |||||||||||||||||||||||||  |||||||| ||||| ||| ||||||  ||| ||||||||||| |||||    
T  24479323 tttgtgtcaatatctcatttcctttgtaaaattttagttgtcacaaaagttatcatatatatgaatgctcaaataacacaactct 24479407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 650 - 707
Target Start/End: Complemental strand, 31249508 - 31249451
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcaca 707  Q
    |||||||||| |||||||  ||||| ||||||||||||||||||||||| ||||||||    
T  31249508 tattgctttggtttttgtaccactacctcatttcctttgtaaaattttggttgtcaca 31249451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 650 - 750
Target Start/End: Original strand, 13106567 - 13106667
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactcttt 749  Q
    |||||||||| ||||||||||| || ||| ||| ||||||||| || || |||| | | |||||||||| || || | |||||||||||||| |||||||    
T  13106567 tattgctttgctttttgtgtcaatacctctttttctttgtaaatttatggttgttataaaagttgtcacctaaatggttgttcaaataacacaactcttt 13106666  T
Q  750 t 750  Q
    |    
T  13106667 t 13106667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 677 - 735
Target Start/End: Complemental strand, 34085056 - 34084998
Alignment:
Q  677 tcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaa 735  Q
    ||||||| ||| |||||||||||||||  |||||||||||||||||| |||| ||||||    
T  34085056 tcatttcttttataaaattttgattgtttcagaagttgtcacatatagagatattcaaa 34084998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 650 - 696
Target Start/End: Complemental strand, 5600970 - 5600924
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattt 696  Q
    ||||||||||||||||||||||| |||| | || |||||||||||||    
T  5600970 tattgctttgatttttgtgtcaccatctaaatttctttgtaaaattt 5600924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 650 - 696
Target Start/End: Original strand, 5639650 - 5639696
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattt 696  Q
    ||||||||||||||||||||||| |||| | || |||||||||||||    
T  5639650 tattgctttgatttttgtgtcaccatctaaatttctttgtaaaattt 5639696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 650 - 748
Target Start/End: Complemental strand, 10839466 - 10839368
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactctt 748  Q
    |||||||||| |||||||| || ||| | |||| ||||||||||||||  ||||| || || || ||| | | || |||||||||||||||| ||||||    
T  10839466 tattgctttggtttttgtgccaatatttaattttctttgtaaaattttagttgtctcaaaaattatcataaaaatggatgttcaaataacactactctt 10839368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 650 - 740
Target Start/End: Original strand, 34639620 - 34639710
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataaca 740  Q
    |||| ||||| || ||||||||||| |||||||  ||||||||||||||||| || || || || |||  || || |||||||||||||||    
T  34639620 tattactttggttattgtgtcactacctcattttatttgtaaaattttgattctctcaaaaattatcatgtaaatggatgttcaaataaca 34639710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 711 - 748
Target Start/End: Complemental strand, 31249459 - 31249422
Alignment:
Q  711 gttgtcacatatatagatgttcaaataacacgactctt 748  Q
    |||||||||||||| |||||||||||||||| ||||||    
T  31249459 gttgtcacatatatggatgttcaaataacacaactctt 31249422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 69; Significance: 2e-30; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 650 - 746
Target Start/End: Complemental strand, 38956602 - 38956506
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactc 746  Q
    |||||||||| |||||||| ||||| ||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||||||| ||||    
T  38956602 tattgctttgttttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 38956506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 650 - 747
Target Start/End: Complemental strand, 24614300 - 24614203
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactct 747  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||| ||||| ||||||||||  ||||||||||||||| |||||    
T  24614300 tattgctttggtttttgtgtcactacctcatttcctttgtaaaattttgattatcacaaaagttatcacatatatgaatgttcaaataacacaactct 24614203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 650 - 747
Target Start/End: Complemental strand, 40112938 - 40112841
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactct 747  Q
    |||||||||| |||||||| ||||| || ||||||||||||||||||||||||||| ||||||||| |||||||| |||||||||||||||| |||||    
T  40112938 tattgctttggtttttgtgccactaccttatttcctttgtaaaattttgattgtcagagaagttgttacatatatggatgttcaaataacacaactct 40112841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 650 - 747
Target Start/End: Original strand, 43025427 - 43025524
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactct 747  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||||  |||| ||| |||||||||||||||||||||||| |||||||| |||||    
T  43025427 tattgctttggtttttgtgccactatctcatttcctttgtaaaattttagttgttacaaaagttgtcacatatatagatgttcgaataacacaactct 43025524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 650 - 740
Target Start/End: Complemental strand, 44895556 - 44895466
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataaca 740  Q
    |||||||||| |||||||| ||||| ||||||||||||||||||||||| |||||||| ||||||| |||||||| |||||||||||||||    
T  44895556 tattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgttacatatatggatgttcaaataaca 44895466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 650 - 741
Target Start/End: Complemental strand, 32529840 - 32529749
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacac 741  Q
    |||||||||| ||||| | |||||| |||||||||||||||||||||||||||||||| || ||||||||||||| |||| |||||||||||    
T  32529840 tattgctttggtttttttatcactacctcatttcctttgtaaaattttgattgtcacaaaaattgtcacatatatggatgctcaaataacac 32529749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 650 - 738
Target Start/End: Complemental strand, 22918153 - 22918065
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataa 738  Q
    |||||||||| |||||||| ||||| ||||||||||||||||||||||||||||| || |||||||||||| ||| |||| ||||||||    
T  22918153 tattgctttggtttttgtgccactacctcatttcctttgtaaaattttgattgtcgcaaaagttgtcacatgtatggatgctcaaataa 22918065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 650 - 749
Target Start/End: Complemental strand, 3937107 - 3937008
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactcttt 749  Q
    |||| ||||| |||||||| || || |||||||||||| |||||||||| |||||||| |||||||||||| ||| |||||||||||||||| |||||||    
T  3937107 tattactttggtttttgtgccaatacctcatttcctttataaaattttggttgtcacaaaagttgtcacatgtatggatgttcaaataacacaactcttt 3937008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 650 - 747
Target Start/End: Complemental strand, 41189527 - 41189428
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatata--gatgttcaaataacacgactct 747  Q
    |||||||||  ||||||||||| || |||||||||||||||||||||||||||||| | ||||| |||||||||||   ||||||||||||||| |||||    
T  41189527 tattgctttagtttttgtgtcaatacctcatttcctttgtaaaattttgattgtcataaaagttatcacatatatatgaatgttcaaataacacaactct 41189428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 650 - 749
Target Start/End: Complemental strand, 25192901 - 25192802
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactcttt 749  Q
    ||||| |||| |||||||||||||| ||||||| ||||||||||||||  |||||||| |||||||||||| |||  || |||||||||||| |||||||    
T  25192901 tattgttttggtttttgtgtcactacctcattttctttgtaaaattttagttgtcacaaaagttgtcacatgtatgaatattcaaataacacaactcttt 25192802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 650 - 746
Target Start/End: Complemental strand, 41989726 - 41989628
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttccttt--gtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactc 746  Q
    |||||||||| |||||||| ||||| |||||||  |||  ||||||||||| |||||||| ||||| |||||||||| |||||||||||||||| ||||    
T  41989726 tattgctttggtttttgtgccactacctcattttttttttgtaaaattttggttgtcacaaaagttatcacatatatggatgttcaaataacacaactc 41989628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 650 - 747
Target Start/End: Complemental strand, 35072346 - 35072249
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactct 747  Q
    |||||||||||||||||||||| | |||||||| |||| |||||||||| ||||  || ||||||||| ||| || |||||||| ||||||| |||||    
T  35072346 tattgctttgatttttgtgtcaatgtctcattttctttataaaattttggttgtttcaaaagttgtcatataaatggatgttcagataacacaactct 35072249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 650 - 746
Target Start/End: Original strand, 40417861 - 40417957
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactc 746  Q
    |||||||||| ||||| ||||| || |||| || ||||||||||||||| ||||| || ||||||||  ||| ||||||||||||||||||| ||||    
T  40417861 tattgctttggtttttatgtcaatacctcactttctttgtaaaattttggttgtctcaaaagttgtcgtataaatagatgttcaaataacacaactc 40417957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 650 - 721
Target Start/End: Complemental strand, 44189294 - 44189223
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacata 721  Q
    |||| ||||| |||||||||||||| ||||||||||||| ||| |||||||||||||| ||||| |||||||    
T  44189294 tattactttggtttttgtgtcactaactcatttcctttgaaaatttttgattgtcacaaaagttatcacata 44189223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 661 - 748
Target Start/End: Complemental strand, 46022240 - 46022153
Alignment:
Q  661 tttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactctt 748  Q
    ||||||||||| || ||||||| |||| |||||||||| ||||| || ||||||||| ||| || |||||||||||||||| ||||||    
T  46022240 tttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 46022153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 650 - 746
Target Start/End: Complemental strand, 45851188 - 45851095
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactc 746  Q
    |||||||||| |||||||||||||   |||||||||||||||||||||  |||||| | || |||| ||| |||| |||||||||||||||| ||||    
T  45851188 tattgctttggtttttgtgtcact---tcatttcctttgtaaaattttagttgtcaaaaaaattgtgacagatatggatgttcaaataacacaactc 45851095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 650 - 747
Target Start/End: Original strand, 31445405 - 31445502
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactct 747  Q
    |||||||||||||||||||||| |  ||||||| ||||||||||||||||||||  || || || ||| ||| |  |||||||||||||||| |||||    
T  31445405 tattgctttgatttttgtgtcaatcactcattttctttgtaaaattttgattgttgcaaaaattatcatataaaatgatgttcaaataacacaactct 31445502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 650 - 747
Target Start/End: Complemental strand, 35098687 - 35098590
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactct 747  Q
    |||||||||||||||||||||| | |||||||| || | |||||||||| ||||  || ||||||||| ||| || ||| |||||||||||| |||||    
T  35098687 tattgctttgatttttgtgtcaatgtctcattttctatataaaattttggttgtttcaaaagttgtcatataaatggatattcaaataacacaactct 35098590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 676 - 749
Target Start/End: Original strand, 43942745 - 43942818
Alignment:
Q  676 ctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactcttt 749  Q
    ||||||| ||||||||||||||| ||| |||| || || |||||||||| |||||||||||||||| |||||||    
T  43942745 ctcattttctttgtaaaattttggttgccacaaaaattatcacatatatggatgttcaaataacacaactcttt 43942818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 650 - 738
Target Start/End: Complemental strand, 46578119 - 46578031
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataa 738  Q
    ||||| ||||||||||||| || || ||| |||| ||| |||||||||| |||||| |||| || |||||||||| |||||||||||||    
T  46578119 tattgatttgatttttgtgccaatacctcgtttcttttataaaattttggttgtcatagaaattatcacatatatggatgttcaaataa 46578031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 661 - 748
Target Start/End: Original strand, 7701642 - 7701729
Alignment:
Q  661 tttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactctt 748  Q
    ||||||||||| || ||||||| |||| ||||| |||| ||||| || ||||||||| ||| || |||||||||||||||| ||||||    
T  7701642 tttttgtgtcaatacctcattttctttataaaactttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 7701729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 650 - 741
Target Start/End: Complemental strand, 47391309 - 47391218
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacac 741  Q
    ||||| |||||||||||||||| ||| ||||||||||| |||||| |||||||||  | ||||| | ||||||||  |||||||| ||||||    
T  47391309 tattgttttgatttttgtgtcaatatttcatttcctttataaaatattgattgtcttaaaagttattacatatatgaatgttcaactaacac 47391218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 650 - 707
Target Start/End: Original strand, 38073307 - 38073364
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcaca 707  Q
    |||||||||| |||||||| || || ||||||||||||||||||||||| ||||||||    
T  38073307 tattgctttggtttttgtgccaatacctcatttcctttgtaaaattttggttgtcaca 38073364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 650 - 728
Target Start/End: Complemental strand, 41863613 - 41863535
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagat 728  Q
    |||||||||| |||||||| || || |||||||  ||||||||||||||||||||  | ||||||||| ||| ||||||    
T  41863613 tattgctttgttttttgtgccaatacctcattttatttgtaaaattttgattgtcttaaaagttgtcatataaatagat 41863535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 650 - 748
Target Start/End: Original strand, 48062144 - 48062242
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactctt 748  Q
    ||||| |||| ||||||||||| || ||||||| |||| |||||||||||||||| || || || ||||  | |  |||||||||||||||| ||||||    
T  48062144 tattgttttggtttttgtgtcaatacctcattttctttataaaattttgattgtctcaaaaattatcactcaaacggatgttcaaataacacaactctt 48062242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 650 - 707
Target Start/End: Original strand, 38861183 - 38861240
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcaca 707  Q
    ||||| |||| |||||||| ||||| || |||| ||||||||||||||||||||||||    
T  38861183 tattgttttggtttttgtgccactaccttatttactttgtaaaattttgattgtcaca 38861240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 650 - 747
Target Start/End: Original strand, 41018751 - 41018848
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactct 747  Q
    |||| ||||| ||||||||| | || ||| ||| ||||||||| || ||||||||| | |||||||||| || |||| | |||||||||||| |||||    
T  41018751 tattactttggtttttgtgttaatacctctttttctttgtaaatttatgattgtcataaaagttgtcacctaaatagttattcaaataacacaactct 41018848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 650 - 740
Target Start/End: Complemental strand, 12007169 - 12007079
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcac-atatatagatgttcaaataaca 740  Q
    ||||||||||||||||||| |||||||| | || |||||||||| |||| |||||  | |||||||||| ||| |||| ||| |||||||||    
T  12007169 tattgctttgatttttgtgccactatctaaatttctttgtaaaa-tttggttgtccaacaagttgtcacaataaatagttgtacaaataaca 12007079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 650 - 703
Target Start/End: Complemental strand, 22925268 - 22925215
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgt 703  Q
    ||||||||| |||||||||||| ||||| |||| | ||||||||||||| ||||    
T  22925268 tattgctttaatttttgtgtcaatatcttattttccttgtaaaattttggttgt 22925215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 69; Significance: 2e-30; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 650 - 746
Target Start/End: Original strand, 552880 - 552976
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactc 746  Q
    |||||||||| |||||||| ||||| ||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||||||| ||||    
T  552880 tattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 552976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 650 - 747
Target Start/End: Complemental strand, 32316912 - 32316815
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactct 747  Q
    |||||||||| ||||||||||| || ||||||| ||||||||||||||| |||||||| |||||||||||||||| |||||||||||||||| |||||    
T  32316912 tattgctttggtttttgtgtcagtacctcattttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactct 32316815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 650 - 749
Target Start/End: Original strand, 15974695 - 15974794
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactcttt 749  Q
    |||||||||| ||||||||| ||||  |||||||||||||||||||||| |||||||| ||||||| |||||||| |||||||||||||||| |||||||    
T  15974695 tattgctttggtttttgtgttactacttcatttcctttgtaaaattttggttgtcacaaaagttgttacatatatggatgttcaaataacacaactcttt 15974794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 654 - 749
Target Start/End: Complemental strand, 33430342 - 33430247
Alignment:
Q  654 gctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactcttt 749  Q
    |||||| |||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||  |||| |||||||||| |||||||    
T  33430342 gctttggtttttgtgtcactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatgaatgtccaaataacacaactcttt 33430247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 650 - 747
Target Start/End: Original strand, 1156807 - 1156904
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactct 747  Q
    |||| ||||| |||||||| ||||||||||||||||||  |||||||||||||||||| ||||| ||| |||||| |||||||||||||||| |||||    
T  1156807 tattactttggtttttgtgccactatctcatttcctttacaaaattttgattgtcacaaaagttatcaaatatatggatgttcaaataacacaactct 1156904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 650 - 746
Target Start/End: Original strand, 14818019 - 14818115
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactc 746  Q
    ||||| |||| |||||||| ||||| |||||||||||| |||||||||| |||||||| ||||||||| ||||||| ||||||||||||||| ||||    
T  14818019 tattgttttggtttttgtgccactacctcatttcctttctaaaattttggttgtcacaaaagttgtcatatatataaatgttcaaataacacaactc 14818115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 650 - 749
Target Start/End: Original strand, 34047474 - 34047573
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactcttt 749  Q
    |||||||||| |||||||| || |||||| ||| ||||||||||||||| |||||||| |||||||||||| ||| |||||||||||||||  |||||||    
T  34047474 tattgctttggtttttgtgccaatatctctttttctttgtaaaattttggttgtcacaaaagttgtcacatttatggatgttcaaataacaaaactcttt 34047573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 650 - 746
Target Start/End: Complemental strand, 13689978 - 13689882
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactc 746  Q
    |||||||||||||||||||||| || |||||||||||| |||||||||  |||||  | || ||||||||||||| |||||||||||||||| ||||    
T  13689978 tattgctttgatttttgtgtcaatacctcatttcctttataaaattttagttgtcgtaaaaattgtcacatatatggatgttcaaataacacaactc 13689882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 650 - 746
Target Start/End: Original strand, 31077881 - 31077977
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactc 746  Q
    ||||| |||| |||||||||||||| |||| |||||||||||||||||| |||||||| |||||||||||| |||  || |||||||||||| ||||    
T  31077881 tattgttttggtttttgtgtcactacctcacttcctttgtaaaattttggttgtcacaaaagttgtcacatgtatgaatattcaaataacacaactc 31077977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 650 - 741
Target Start/End: Complemental strand, 18737551 - 18737460
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacac 741  Q
    ||||| |||| |||||||| || || ||||||| ||||||||||||||| |||||||| ||||||||||||| || ||||||||||||||||    
T  18737551 tattgttttggtttttgtgacaatacctcattttctttgtaaaattttggttgtcacaaaagttgtcacatacatggatgttcaaataacac 18737460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 650 - 749
Target Start/End: Original strand, 26595436 - 26595535
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactcttt 749  Q
    |||||||||| ||||||||||| || ||||||| ||||||||||||||| ||||  || ||||||||| ||| || |||||||||||||||| |||||||    
T  26595436 tattgctttggtttttgtgtcaatacctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatggatgttcaaataacacaactcttt 26595535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 650 - 748
Target Start/End: Original strand, 4820454 - 4820552
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactctt 748  Q
    |||||||||||||||||||||| |  ||||||| ||||||||||||||||||||| || ||||| |||  || |||| |||||||||||||| ||||||    
T  4820454 tattgctttgatttttgtgtcaatgcctcattttctttgtaaaattttgattgtctcaaaagttatcatgtaaatagttgttcaaataacacaactctt 4820552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 650 - 746
Target Start/End: Complemental strand, 5694135 - 5694039
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactc 746  Q
    ||||| |||||||||||||||| || ||||||||||||||||||||| | ||||| || ||||||||||||| ||  ||||| ||||||||| ||||    
T  5694135 tattgttttgatttttgtgtcaatacctcatttcctttgtaaaatttaggttgtctcaaaagttgtcacatacatgaatgtttaaataacacaactc 5694039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 650 - 746
Target Start/End: Complemental strand, 22079547 - 22079451
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactc 746  Q
    |||||||||||||||||||||| ||  |||||| ||||| ||||||||| |||||||| |||| ||||  || || |||||||||||||||| ||||    
T  22079547 tattgctttgatttttgtgtcaatacatcattttctttgcaaaattttggttgtcacaaaagtggtcatctaaatggatgttcaaataacacaactc 22079451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 650 - 717
Target Start/End: Original strand, 277078 - 277145
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtca 717  Q
    |||||||||||||||||||||| ||| |||||| ||||||||||||||| |||||||| || ||||||    
T  277078 tattgctttgatttttgtgtcaatatatcattttctttgtaaaattttggttgtcacaaaaattgtca 277145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 650 - 741
Target Start/End: Original strand, 11612275 - 11612366
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacac 741  Q
    ||||||||| |||||||||  | || ||||||| |||||||||||||||||| ||||| || || ||||||||||| || ||||||||||||    
T  11612275 tattgctttaatttttgtgcaaatacctcattttctttgtaaaattttgattatcacaaaaattatcacatatataaatattcaaataacac 11612366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 661 - 748
Target Start/End: Original strand, 16199548 - 16199635
Alignment:
Q  661 tttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactctt 748  Q
    ||||||||||| || ||||||| |||| |||||||||| ||||| || ||||||||| ||| || |||||||||||||||| ||||||    
T  16199548 tttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 16199635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 650 - 735
Target Start/End: Complemental strand, 3853291 - 3853206
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaa 735  Q
    |||||||||||||||||||||| |||||||||| ||||||||||| ||  ||||| || ||||||||| ||| ||  |||||||||    
T  3853291 tattgctttgatttttgtgtcaatatctcattttctttgtaaaatctttgttgtctcaaaagttgtcatataaatgaatgttcaaa 3853206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 650 - 746
Target Start/End: Complemental strand, 33603264 - 33603168
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactc 746  Q
    |||||||||||||||||||||| || ||||||| ||||||||||||||||   ||  | ||||||||| ||| || |||||||||| ||||| ||||    
T  33603264 tattgctttgatttttgtgtcaatacctcattttctttgtaaaattttgacaatcttaaaagttgtcatataaatggatgttcaaaaaacacaactc 33603168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 650 - 741
Target Start/End: Complemental strand, 30423536 - 30423445
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacac 741  Q
    ||||||||||| |||||| ||| || ||||||| |||| ||||  |||||||||  || ||||| ||||||| |||||||||||||||||||    
T  30423536 tattgctttgaattttgtatcaatacctcattttctttataaagctttgattgtatcaaaagttatcacataaatagatgttcaaataacac 30423445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 667 - 717
Target Start/End: Complemental strand, 5570305 - 5570255
Alignment:
Q  667 tgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtca 717  Q
    ||||||||||||||||||||||||||||||| ||||||| | |||||||||    
T  5570305 tgtcactatctcatttcctttgtaaaattttaattgtcataaaagttgtca 5570255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 650 - 707
Target Start/End: Complemental strand, 5080551 - 5080494
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcaca 707  Q
    |||||||||  |||||||||||||| ||||||||||||||||||||||| || |||||    
T  5080551 tattgctttagtttttgtgtcactacctcatttcctttgtaaaattttggttatcaca 5080494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 650 - 707
Target Start/End: Complemental strand, 8098581 - 8098524
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcaca 707  Q
    |||||||||| |||||||||||||| || ||||||||| |||||||||| ||||||||    
T  8098581 tattgctttggtttttgtgtcactaccttatttcctttctaaaattttggttgtcaca 8098524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 650 - 734
Target Start/End: Complemental strand, 11014974 - 11014890
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaa 734  Q
    ||||| ||| |||||||||||| || ||||||| |||  |||||||||||||||| || ||||| ||| ||| ||||||||||||    
T  11014974 tattgatttaatttttgtgtcaatacctcattttcttcataaaattttgattgtctcaaaagttatcatataaatagatgttcaa 11014890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 650 - 749
Target Start/End: Original strand, 24900861 - 24900960
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactcttt 749  Q
    |||||||||| |||||||| || |  ||||||| |||||||||||||| |||||  || | ||||||| ||| |  |||||||||||||||| |||||||    
T  24900861 tattgctttggtttttgtgccaatcactcattttctttgtaaaattttaattgttgcaaatgttgtcatataaaatgatgttcaaataacacaactcttt 24900960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 650 - 748
Target Start/End: Complemental strand, 31883287 - 31883189
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactctt 748  Q
    ||||||||||||||||||||||  | ||| ||| |||||||||||| || ||||| || || ||||||   | |||| ||||||||||| || ||||||    
T  31883287 tattgctttgatttttgtgtcaagacctctttttctttgtaaaattatggttgtcccaaaaattgtcaatcaaatagttgttcaaataatacaactctt 31883189  T

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Target: scaffold0056 (Bit Score: 68; Significance: 6e-30; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 650 - 749
Target Start/End: Complemental strand, 76603 - 76504
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactcttt 749  Q
    |||||||||| |||||||| ||||| ||||||||||||||||||||||| |||||||| |||||||||||||||| |||||| ||||||||| |||||||    
T  76603 tattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttaaaataacacaactcttt 76504  T

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Target: scaffold0199 (Bit Score: 67; Significance: 2e-29; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 652 - 750
Target Start/End: Original strand, 8757 - 8855
Alignment:
Q  652 ttgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactctttt 750  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||| |||||| | ||||||||| |||||| |||||||||||||||| ||||||||    
T  8757 ttgctttggtttttgtgtcactacctcatttcctttgtaaaattttggttgtcataaaagttgtcagatatatggatgttcaaataacacaactctttt 8855  T

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Target: scaffold0098 (Bit Score: 61; Significance: 1e-25; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 656 - 740
Target Start/End: Original strand, 49388 - 49472
Alignment:
Q  656 tttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataaca 740  Q
    |||| |||||||||||||| ||||||||||||||||||||||| || ||||| |||||||||||||||| |||||||||||||||    
T  49388 tttggtttttgtgtcactacctcatttcctttgtaaaattttggttatcacaaaagttgtcacatatatggatgttcaaataaca 49472  T

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Target: scaffold0519 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 650 - 747
Target Start/End: Original strand, 11869 - 11966
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactct 747  Q
    |||||||||| ||||||||||| || ||||||| ||||||||||||||| | |||||| ||||||||| || ||||||||||||||||| || |||||    
T  11869 tattgctttggtttttgtgtcaatacctcattttctttgtaaaattttggtcgtcacaaaagttgtcatatttatagatgttcaaataatacaactct 11966  T

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Target: scaffold0067 (Bit Score: 46; Significance: 8e-17; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 650 - 707
Target Start/End: Original strand, 35610 - 35667
Alignment:
Q  650 tattgctttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcaca 707  Q
    |||||||||| |||||||||||||| ||||||| ||||||||||||||||||||||||    
T  35610 tattgctttggtttttgtgtcactacctcattttctttgtaaaattttgattgtcaca 35667  T

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Target: scaffold0041 (Bit Score: 36; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 656 - 707
Target Start/End: Complemental strand, 10941 - 10890
Alignment:
Q  656 tttgatttttgtgtcactatctcatttcctttgtaaaattttgattgtcaca 707  Q
    |||||||||||||| |||| ||||||| |||| |||||||||||||||||||    
T  10941 tttgatttttgtgttactacctcattttctttataaaattttgattgtcaca 10890  T

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Target: scaffold0087 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 661 - 746
Target Start/End: Complemental strand, 53334 - 53249
Alignment:
Q  661 tttttgtgtcactatctcatttcctttgtaaaattttgattgtcacagaagttgtcacatatatagatgttcaaataacacgactc 746  Q
    ||||||||||| |||||||||| |||| |||| ||||| |||||  | || || ||| ||| ||| ||||||||||||||| ||||    
T  53334 tttttgtgtcaatatctcattttctttataaatttttggttgtctaaaaacttatcatataaataaatgttcaaataacacaactc 53249  T

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