View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21094_low_4 (Length: 271)

Name: NF21094_low_4
Description: NF21094
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21094_low_4
NF21094_low_4
[»] chr4 (51 HSPs)
chr4 (14-271)||(53695726-53695984)
chr4 (194-271)||(29646624-29646701)
chr4 (194-271)||(31681337-31681414)
chr4 (215-271)||(56361642-56361698)
chr4 (194-271)||(3716325-3716402)
chr4 (194-271)||(36091059-36091136)
chr4 (194-271)||(41759990-41760067)
chr4 (194-271)||(46216101-46216178)
chr4 (184-268)||(1414431-1414515)
chr4 (215-271)||(47302417-47302473)
chr4 (194-271)||(37855121-37855198)
chr4 (198-271)||(39162134-39162207)
chr4 (198-271)||(46004653-46004726)
chr4 (191-271)||(53389176-53389256)
chr4 (200-271)||(52589077-52589148)
chr4 (193-271)||(51436143-51436221)
chr4 (194-271)||(9858244-9858321)
chr4 (194-263)||(18425455-18425524)
chr4 (194-271)||(27538915-27538992)
chr4 (194-267)||(31908443-31908516)
chr4 (194-271)||(48579238-48579315)
chr4 (194-269)||(28037685-28037760)
chr4 (194-271)||(14802712-14802789)
chr4 (194-271)||(30342825-30342902)
chr4 (194-271)||(30539569-30539646)
chr4 (194-263)||(34280566-34280635)
chr4 (198-271)||(36592364-36592437)
chr4 (194-259)||(48066346-48066411)
chr4 (194-271)||(52809273-52809350)
chr4 (194-271)||(55722476-55722553)
chr4 (196-264)||(38835854-38835922)
chr4 (194-264)||(13548740-13548810)
chr4 (194-244)||(49288536-49288586)
chr4 (194-271)||(43137694-43137771)
chr4 (218-271)||(46041725-46041778)
chr4 (194-256)||(10779335-10779398)
chr4 (194-245)||(12756002-12756053)
chr4 (193-271)||(38975276-38975352)
chr4 (194-256)||(44998411-44998474)
chr4 (194-264)||(19842438-19842508)
chr4 (194-264)||(37519300-37519370)
chr4 (194-264)||(37523516-37523586)
chr4 (194-264)||(39380735-39380805)
chr4 (196-245)||(44957274-44957323)
chr4 (196-264)||(8749330-8749398)
chr4 (194-241)||(10972959-10973007)
chr4 (197-256)||(23639579-23639639)
chr4 (197-256)||(23645237-23645297)
chr4 (194-230)||(24566735-24566771)
chr4 (194-262)||(52940480-52940548)
chr4 (196-264)||(55224127-55224195)
[»] chr5 (37 HSPs)
chr5 (194-271)||(21051633-21051710)
chr5 (195-271)||(2318755-2318831)
chr5 (194-271)||(28332120-28332198)
chr5 (194-271)||(4618041-4618118)
chr5 (197-271)||(13795599-13795673)
chr5 (197-271)||(27116465-27116539)
chr5 (194-271)||(2029353-2029430)
chr5 (194-271)||(6114103-6114180)
chr5 (194-271)||(12362687-12362764)
chr5 (196-271)||(6560828-6560903)
chr5 (196-271)||(21605650-21605725)
chr5 (188-271)||(34302640-34302723)
chr5 (197-271)||(13090917-13090991)
chr5 (194-271)||(9589209-9589286)
chr5 (206-271)||(36880798-36880863)
chr5 (194-271)||(43237682-43237759)
chr5 (200-271)||(18228788-18228859)
chr5 (197-271)||(13410545-13410619)
chr5 (197-271)||(14967235-14967309)
chr5 (194-271)||(29743895-29743973)
chr5 (194-271)||(1662023-1662100)
chr5 (194-271)||(6532579-6532656)
chr5 (197-262)||(31587996-31588061)
chr5 (219-271)||(37431678-37431733)
chr5 (223-271)||(41802135-41802183)
chr5 (194-269)||(42917117-42917192)
chr5 (218-271)||(2141266-2141319)
chr5 (218-271)||(2413951-2414004)
chr5 (218-271)||(9534894-9534947)
chr5 (196-245)||(33145215-33145264)
chr5 (195-271)||(3056386-3056462)
chr5 (215-271)||(3425406-3425462)
chr5 (194-256)||(3881832-3881895)
chr5 (194-245)||(4039827-4039878)
chr5 (196-271)||(24097873-24097948)
chr5 (204-271)||(35817677-35817744)
chr5 (217-269)||(35682120-35682172)
[»] chr8 (36 HSPs)
chr8 (192-271)||(37465682-37465761)
chr8 (194-271)||(42444547-42444624)
chr8 (194-271)||(16323559-16323636)
chr8 (194-271)||(17642074-17642151)
chr8 (194-271)||(39347459-39347536)
chr8 (194-270)||(19718681-19718757)
chr8 (193-271)||(2273009-2273087)
chr8 (194-271)||(26439852-26439930)
chr8 (194-271)||(529267-529344)
chr8 (194-271)||(43049537-43049613)
chr8 (193-263)||(4475045-4475114)
chr8 (194-263)||(15726227-15726296)
chr8 (194-271)||(23286565-23286642)
chr8 (194-271)||(43485370-43485447)
chr8 (194-264)||(29773445-29773515)
chr8 (194-271)||(945976-946053)
chr8 (194-271)||(14498632-14498709)
chr8 (194-271)||(28090192-28090269)
chr8 (194-271)||(36002356-36002433)
chr8 (194-271)||(37511088-37511165)
chr8 (196-263)||(43921127-43921194)
chr8 (194-268)||(6800104-6800178)
chr8 (196-270)||(36886492-36886566)
chr8 (218-271)||(10280584-10280637)
chr8 (194-271)||(13483225-13483302)
chr8 (194-271)||(38502184-38502261)
chr8 (194-256)||(37404946-37405009)
chr8 (196-271)||(44934901-44934976)
chr8 (194-255)||(2666505-2666566)
chr8 (194-271)||(29229506-29229583)
chr8 (194-271)||(34332112-34332189)
chr8 (194-256)||(28897247-28897310)
chr8 (194-244)||(12801107-12801157)
chr8 (218-271)||(23274646-23274699)
chr8 (193-242)||(27847457-27847506)
chr8 (218-271)||(37161528-37161581)
[»] chr3 (41 HSPs)
chr3 (188-271)||(19547483-19547566)
chr3 (197-271)||(3136273-3136347)
chr3 (194-271)||(25592335-25592412)
chr3 (194-271)||(27647478-27647555)
chr3 (194-271)||(53516910-53516987)
chr3 (197-271)||(7671806-7671880)
chr3 (194-271)||(21289142-21289219)
chr3 (194-271)||(43715077-43715154)
chr3 (194-271)||(4663467-4663544)
chr3 (194-271)||(11140247-11140324)
chr3 (194-271)||(31308877-31308954)
chr3 (194-271)||(40650067-40650144)
chr3 (194-271)||(42067579-42067656)
chr3 (197-271)||(29347589-29347663)
chr3 (194-271)||(29786926-29787003)
chr3 (194-271)||(38785411-38785488)
chr3 (194-263)||(42364264-42364333)
chr3 (194-271)||(876551-876628)
chr3 (218-271)||(27082675-27082728)
chr3 (194-271)||(35171522-35171599)
chr3 (194-271)||(44670587-44670664)
chr3 (215-271)||(32717674-32717730)
chr3 (195-263)||(39289247-39289315)
chr3 (194-245)||(29698678-29698729)
chr3 (220-271)||(45518664-45518715)
chr3 (218-264)||(27079715-27079761)
chr3 (194-271)||(29629314-29629389)
chr3 (195-264)||(4659757-4659826)
chr3 (196-261)||(5532384-5532449)
chr3 (194-271)||(44365621-44365698)
chr3 (194-271)||(45636089-45636166)
chr3 (215-263)||(34593714-34593762)
chr3 (194-271)||(42848535-42848614)
chr3 (197-264)||(31479559-31479626)
chr3 (194-256)||(44962602-44962665)
chr3 (194-271)||(39630219-39630297)
chr3 (194-244)||(46936659-46936709)
chr3 (193-271)||(47948724-47948802)
chr3 (195-260)||(6890431-6890496)
chr3 (196-245)||(43903074-43903123)
chr3 (194-263)||(44568583-44568651)
[»] scaffold0625 (1 HSPs)
scaffold0625 (194-271)||(6592-6669)
[»] chr7 (34 HSPs)
chr7 (194-271)||(18990091-18990168)
chr7 (194-271)||(43750075-43750152)
chr7 (211-271)||(30317212-30317272)
chr7 (194-271)||(45857803-45857880)
chr7 (191-271)||(11485993-11486073)
chr7 (215-271)||(20439144-20439200)
chr7 (194-271)||(27956377-27956455)
chr7 (197-271)||(28326684-28326758)
chr7 (194-263)||(41913431-41913500)
chr7 (194-271)||(42710931-42711008)
chr7 (194-271)||(42974895-42974972)
chr7 (194-263)||(44964158-44964227)
chr7 (197-271)||(1691320-1691394)
chr7 (194-271)||(3909928-3910005)
chr7 (194-271)||(30624052-30624129)
chr7 (194-271)||(30862789-30862866)
chr7 (194-271)||(38129714-38129791)
chr7 (194-271)||(41331729-41331806)
chr7 (226-270)||(8770695-8770739)
chr7 (215-271)||(41809223-41809279)
chr7 (198-265)||(31482378-31482445)
chr7 (196-271)||(40941877-40941952)
chr7 (194-264)||(9682362-9682432)
chr7 (198-264)||(21699625-21699691)
chr7 (194-244)||(23331700-23331750)
chr7 (194-244)||(27800384-27800434)
chr7 (197-267)||(30936425-30936495)
chr7 (194-244)||(40856891-40856941)
chr7 (194-271)||(43069080-43069155)
chr7 (197-271)||(47748131-47748205)
chr7 (194-271)||(41381497-41381574)
chr7 (194-256)||(42902730-42902793)
chr7 (194-243)||(29689282-29689331)
chr7 (192-257)||(45458696-45458761)
[»] chr6 (25 HSPs)
chr6 (194-271)||(6265263-6265340)
chr6 (194-271)||(11446736-11446813)
chr6 (197-271)||(30020687-30020761)
chr6 (194-271)||(32834103-32834180)
chr6 (195-271)||(8376353-8376429)
chr6 (194-271)||(15383533-15383610)
chr6 (196-271)||(2258905-2258980)
chr6 (194-264)||(24212912-24212982)
chr6 (194-271)||(8401745-8401822)
chr6 (194-271)||(13390385-13390462)
chr6 (218-271)||(24487616-24487669)
chr6 (194-271)||(26358882-26358959)
chr6 (196-264)||(4901285-4901353)
chr6 (196-263)||(17545607-17545674)
chr6 (194-271)||(6848510-6848587)
chr6 (226-271)||(17010393-17010438)
chr6 (194-271)||(34196138-34196215)
chr6 (194-256)||(1338853-1338916)
chr6 (194-245)||(1705606-1705657)
chr6 (194-256)||(18870922-18870985)
chr6 (194-245)||(21181139-21181190)
chr6 (194-256)||(1339374-1339436)
chr6 (193-243)||(11273774-11273824)
chr6 (194-263)||(3954244-3954313)
chr6 (196-245)||(24159827-24159876)
[»] chr2 (38 HSPs)
chr2 (194-271)||(6513593-6513670)
chr2 (194-271)||(11598114-11598192)
chr2 (194-271)||(5091997-5092074)
chr2 (194-271)||(34438515-34438592)
chr2 (196-271)||(34665573-34665648)
chr2 (197-271)||(11813526-11813600)
chr2 (194-271)||(4673931-4674008)
chr2 (194-263)||(11227627-11227696)
chr2 (194-271)||(12547364-12547441)
chr2 (194-271)||(20212483-20212559)
chr2 (194-271)||(37909379-37909456)
chr2 (204-271)||(5420237-5420304)
chr2 (196-271)||(6884161-6884236)
chr2 (194-261)||(32499150-32499217)
chr2 (196-271)||(36489360-36489435)
chr2 (223-271)||(40370494-40370542)
chr2 (196-271)||(5389530-5389605)
chr2 (224-271)||(6438504-6438551)
chr2 (220-271)||(19636427-19636478)
chr2 (220-271)||(19835020-19835071)
chr2 (194-264)||(3383523-3383593)
chr2 (194-271)||(7467120-7467204)
chr2 (196-271)||(33423343-33423420)
chr2 (194-271)||(58920-58997)
chr2 (194-271)||(14533151-14533228)
chr2 (194-271)||(38963393-38963470)
chr2 (194-263)||(42427908-42427977)
chr2 (196-263)||(8371903-8371970)
chr2 (194-244)||(15206092-15206143)
chr2 (197-264)||(37989034-37989101)
chr2 (194-256)||(39879263-39879326)
chr2 (194-244)||(1353507-1353557)
chr2 (197-271)||(37083211-37083285)
chr2 (197-262)||(12071158-12071223)
chr2 (195-244)||(42046076-42046125)
chr2 (193-245)||(15362824-15362876)
chr2 (192-264)||(37782185-37782257)
chr2 (193-245)||(41555780-41555832)
[»] chr1 (53 HSPs)
chr1 (194-271)||(632977-633054)
chr1 (194-271)||(9166873-9166950)
chr1 (194-271)||(48616776-48616853)
chr1 (196-271)||(2247069-2247144)
chr1 (196-271)||(2620648-2620723)
chr1 (194-265)||(7121957-7122028)
chr1 (197-271)||(33906322-33906396)
chr1 (194-271)||(33098984-33099061)
chr1 (196-271)||(26011271-26011346)
chr1 (193-271)||(922171-922249)
chr1 (193-271)||(27295057-27295135)
chr1 (193-271)||(42317154-42317232)
chr1 (194-271)||(31931027-31931104)
chr1 (215-271)||(28791697-28791753)
chr1 (195-271)||(44246327-44246403)
chr1 (196-271)||(51184044-51184119)
chr1 (197-271)||(35910165-35910239)
chr1 (197-271)||(51781433-51781507)
chr1 (194-271)||(8461855-8461932)
chr1 (194-271)||(16482576-16482653)
chr1 (194-263)||(37498744-37498813)
chr1 (194-271)||(39190886-39190963)
chr1 (194-271)||(45423609-45423686)
chr1 (194-271)||(46771061-46771138)
chr1 (194-271)||(50239563-50239640)
chr1 (221-270)||(52260840-52260889)
chr1 (196-271)||(11778965-11779040)
chr1 (189-271)||(28493805-28493887)
chr1 (193-271)||(50905580-50905658)
chr1 (194-271)||(23304407-23304484)
chr1 (194-263)||(35305151-35305220)
chr1 (197-269)||(27352850-27352922)
chr1 (215-271)||(36275046-36275102)
chr1 (194-256)||(25493498-25493561)
chr1 (200-271)||(51519788-51519859)
chr1 (196-271)||(51984936-51985011)
chr1 (194-264)||(41073270-41073340)
chr1 (218-271)||(18641912-18641965)
chr1 (194-271)||(34256453-34256530)
chr1 (194-271)||(38262463-38262540)
chr1 (194-271)||(39971598-39971675)
chr1 (194-271)||(52303013-52303090)
chr1 (231-271)||(51978185-51978225)
chr1 (194-256)||(24248146-24248209)
chr1 (194-256)||(33829209-33829272)
chr1 (194-256)||(33838694-33838757)
chr1 (194-245)||(45650007-45650058)
chr1 (197-271)||(23056768-23056842)
chr1 (197-271)||(26102802-26102876)
chr1 (194-271)||(5956856-5956933)
chr1 (188-256)||(43224989-43225058)
chr1 (194-262)||(44978869-44978937)
chr1 (215-271)||(47719302-47719357)
[»] scaffold0113 (1 HSPs)
scaffold0113 (215-271)||(29266-29322)
[»] scaffold0604 (1 HSPs)
scaffold0604 (196-271)||(2022-2097)
[»] scaffold0005 (1 HSPs)
scaffold0005 (194-271)||(36938-37015)
[»] scaffold0077 (1 HSPs)
scaffold0077 (218-264)||(48034-48080)
[»] scaffold1844 (1 HSPs)
scaffold1844 (194-245)||(1116-1167)
[»] scaffold0072 (1 HSPs)
scaffold0072 (194-244)||(47931-47981)
[»] scaffold0060 (1 HSPs)
scaffold0060 (194-261)||(45761-45829)


Alignment Details
Target: chr4 (Bit Score: 211; Significance: 1e-116; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 14 - 271
Target Start/End: Complemental strand, 53695984 - 53695726
Alignment:
Q  14 agagtaactttatgaataaattaagactttattatgtggttggatgggcgtttagaaaagcaaaaccgcgataaaaaacgacttttacataccaactttt 113  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53695984 agagtaactttatgaataaattaagactttagtatgtggttggatgagcgtttagaaaagcaaaaccgcgataaaaaacgacttttacataccaactttt 53695885  T
Q  114 gattttcaccgtggggaggctctcaaacctgagtttgcgcaagaaaatctcaactcaaacaaatgctaagtattaataa-gggcaaattctatggtatat 212  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||| ||||||||||||| ||    
T  53695884 gattttcaccgtggggaggctctcaaacctgagtttgcgcaagaaaatgtcaacccaaacaaatgctaagtattaataaggggtaaattctatggtacat 53695785  T
Q  213 ctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
     ||||||||||| |||||||||||| |||||||||||||||||||| ||||||||||||    
T  53695784 ttaaaaatttgaatgtattggtacatcaaatcaaaaaattaatagtcaaatgtgttatt 53695726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 194 - 271
Target Start/End: Original strand, 29646624 - 29646701
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||||| ||| |||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  29646624 ggcaaattctatggtacatcaaaaattttgagtgtattggtacaccaaatcaataaattaatagttaaatatgttatt 29646701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 194 - 271
Target Start/End: Original strand, 31681337 - 31681414
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||||| | ||||||||||  |||||||||||||||||||||| |||||||||||||| |||||||||    
T  31681337 ggcaaattctatggtacacctaaaaattttggtgtattggtacaccaaatcaataaattaatagttaagtgtgttatt 31681414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 215 - 271
Target Start/End: Complemental strand, 56361698 - 56361642
Alignment:
Q  215 aaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  56361698 aaaaatttgagtgtattggtacaccaaatcaataaattaatagttaaatgtgttatt 56361642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 194 - 271
Target Start/End: Original strand, 3716325 - 3716402
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||||| ||| || |||||||||||||||||||||||||||   ||||||||||||||||| ||||||    
T  3716325 ggcaaattctatggtacatccaataatttgagtgtattggtacaccaaatccttaaattaatagttaaatgagttatt 3716402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 194 - 271
Target Start/End: Original strand, 36091059 - 36091136
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||| ||||||| ||| ||| || ||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  36091059 ggcaaattatatggtacatccaaagatatgagtgtattggtacaccaaatcattaaattaatagttaaatgtgttatt 36091136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 41760067 - 41759990
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||||| ||| || |||||||||||||||||||||||||||   ||||||||||||||||| ||||||    
T  41760067 ggcaaattctatggtacatccaacaatttgagtgtattggtacaccaaatccttaaattaatagttaaatgagttatt 41759990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 46216178 - 46216101
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||| ||| | | ||||||||||||||||||||||||| |||||| ||||||||| ||||||||||||||    
T  46216178 ggcaaattctattgtacacccaaaaatttgagtgtattggtacacccaatcaacaaattaataattaaatgtgttatt 46216101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 184 - 268
Target Start/End: Complemental strand, 1414515 - 1414431
Alignment:
Q  184 tattaataagggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgtt 268  Q
    |||||| || |||||||| ||||| | | ||||| |||||||||||||||||||||||||||  |||||||||||||||||||||    
T  1414515 tattaaaaaaggcaaattttatggcacacctaaagatttgagtgtattggtacaccaaatcattaaattaatagttaaatgtgtt 1414431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 215 - 271
Target Start/End: Original strand, 47302417 - 47302473
Alignment:
Q  215 aaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  47302417 aaaaatttgagtgtattggtacacccaatcaacaaattaatagttaaatgtgttatt 47302473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 194 - 271
Target Start/End: Original strand, 37855121 - 37855198
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||||||||||| |||| |||| ||||||||||||| |||||||||||||   ||||||||||||||||| ||||||    
T  37855121 ggcaaattctatgatatacctaacaatttgagtgtataggtacaccaaatccttaaattaatagttaaatgagttatt 37855198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 198 - 271
Target Start/End: Complemental strand, 39162207 - 39162134
Alignment:
Q  198 aattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||| |   ||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||    
T  39162207 aattctatggtacactcaaaaatttgggtgtattggtacaccaagtcaataaattaatagttaaatgtgttatt 39162134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 198 - 271
Target Start/End: Complemental strand, 46004726 - 46004653
Alignment:
Q  198 aattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||| || | |||||| || ||||||||||||    
T  46004726 aattctatggtacatccaaaaatttgagtgtattggtacaccaaattaatatattaatcgtaaaatgtgttatt 46004653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 191 - 271
Target Start/End: Complemental strand, 53389256 - 53389176
Alignment:
Q  191 aagggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||||||||||||||||| ||| || ||||||||||||| ||||||| |||||   ||||||||||||||||| ||||||    
T  53389256 aagggcaaattctatggtacatcaaacaatttgagtgtatcggtacactaaatctttaaattaatagttaaatgagttatt 53389176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 200 - 271
Target Start/End: Original strand, 52589077 - 52589148
Alignment:
Q  200 ttctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||| ||| || |||||||||||||||||||||||||||   ||||||||||||||||| ||||||    
T  52589077 ttctatggtacatccaacaatttgagtgtattggtacaccaaatccttaaattaatagttaaatgagttatt 52589148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 193 - 271
Target Start/End: Complemental strand, 51436221 - 51436143
Alignment:
Q  193 gggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||||||||||||||| | | || ||||||||||||||||||||||||||    ||||||||||||||||| ||||||    
T  51436221 gggcaaattctatggtacacccaacaatttgagtgtattggtacaccaaattcttaaattaatagttaaatgagttatt 51436143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 194 - 271
Target Start/End: Original strand, 9858244 - 9858321
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||| ||| | | ||| || ||||||||||| ||||||||||||  ||||||||||||||||||||||||    
T  9858244 ggcaaattctatagtacacccaaagatatgagtgtattgatacaccaaatcattaaattaatagttaaatgtgttatt 9858321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 194 - 263
Target Start/End: Complemental strand, 18425524 - 18425455
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaat 263  Q
    |||||||||||||||| | | ||| || ||||||||||||||||||||||||  ||||||||||||||||    
T  18425524 ggcaaattctatggtacacccaaagatatgagtgtattggtacaccaaatcattaaattaatagttaaat 18425455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 194 - 271
Target Start/End: Original strand, 27538915 - 27538992
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||| |||||||||| | | || |||||||||||||||||||||||||||   ||||||||||||||||| ||||||    
T  27538915 ggcaagttctatggtacacccaacaatttgagtgtattggtacaccaaatccttaaattaatagttaaatgagttatt 27538992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 194 - 267
Target Start/End: Original strand, 31908443 - 31908516
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgt 267  Q
    ||||||||||||| || | | ||| || ||||||||||||||||||||||||  ||||||||||||||||||||    
T  31908443 ggcaaattctatgatacacccaaagatatgagtgtattggtacaccaaatcattaaattaatagttaaatgtgt 31908516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 48579315 - 48579238
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||| ||||||| ||| || ||||||| |||||||||||||||||||   ||||||||||||||||| ||||||    
T  48579315 ggcaaattatatggtacatccaacaatttgaatgtattggtacaccaaatccttaaattaatagttaaatgagttatt 48579238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 269
Target Start/End: Original strand, 28037685 - 28037760
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgtta 269  Q
    |||||||||||||||  | | || |||||||||||||||||||||||||||   ||||||||||||||||| ||||    
T  28037685 ggcaaattctatggtgcacccaacaatttgagtgtattggtacaccaaatccttaaattaatagttaaatgagtta 28037760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 271
Target Start/End: Original strand, 14802712 - 14802789
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||||| |   || ||||||||||||||| |||||||||||   ||||||||||||||||| ||||||    
T  14802712 ggcaaattctatggtacactcaacaatttgagtgtattgatacaccaaatccttaaattaatagttaaatgagttatt 14802789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 271
Target Start/End: Original strand, 30342825 - 30342902
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||| ||||||| | | ||  ||||||||||||||||||||||||||   ||||||||||||||||| ||||||    
T  30342825 ggcaaattatatggtacacccaaccatttgagtgtattggtacaccaaatctttaaattaatagttaaatgagttatt 30342902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 271
Target Start/End: Original strand, 30539569 - 30539646
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||| |||||||||| | | || ||||| |||||||||||||||||||||   ||||||||||||||||| ||||||    
T  30539569 ggcaagttctatggtacacccaacaatttaagtgtattggtacaccaaatccttaaattaatagttaaatgagttatt 30539646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 263
Target Start/End: Complemental strand, 34280635 - 34280566
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaat 263  Q
    ||||| |||||||||| | | || |||||||||||||||||||||||||||   ||||||||||||||||    
T  34280635 ggcaagttctatggtacacccaacaatttgagtgtattggtacaccaaatccttaaattaatagttaaat 34280566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 198 - 271
Target Start/End: Complemental strand, 36592437 - 36592364
Alignment:
Q  198 aattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||| ||||||| | | |||||||||||||||||| |||||||||||   ||||||||||||||||| ||||||    
T  36592437 aattttatggtacacccaaaaatttgagtgtattgttacaccaaatccttaaattaatagttaaatgagttatt 36592364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 259
Target Start/End: Complemental strand, 48066411 - 48066346
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagtt 259  Q
    |||||||||||||||| ||| ||  ||||||||||||||||| |||||||||  ||||||||||||    
T  48066411 ggcaaattctatggtacatccaatcatttgagtgtattggtataccaaatcattaaattaatagtt 48066346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 52809350 - 52809273
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||||| |||||||| ||| || |||||||||||||||||||||| |||    ||||||||||||||||| ||||||    
T  52809350 ggcaaatactatggtacatccaacaatttgagtgtattggtacaccgaatttttaaattaatagttaaatgagttatt 52809273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 271
Target Start/End: Original strand, 55722476 - 55722553
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||||||||||| || |||||| ||||||| ||||||||||||| |||||   |||||||||||||| || ||||||    
T  55722476 ggcaaattctatgatacatctaacaatttgaatgtattggtacactaaatccttaaattaatagttaattgagttatt 55722553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 196 - 264
Target Start/End: Original strand, 38835854 - 38835922
Alignment:
Q  196 caaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatg 264  Q
    |||||||||||||| | |||| |||||||||||||||||||| |||||    |||||||||||||||||    
T  38835854 caaattctatggtacacctaataatttgagtgtattggtacatcaaattcttaaattaatagttaaatg 38835922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 264
Target Start/End: Complemental strand, 13548810 - 13548740
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatg 264  Q
    |||||||| ||||||  ||| |||||||||||||||  ||||||||||||||  ||||||||| |||||||    
T  13548810 ggcaaattttatggtgcatccaaaaatttgagtgtaccggtacaccaaatcattaaattaataattaaatg 13548740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 244
Target Start/End: Original strand, 49288536 - 49288586
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatc 244  Q
    |||||||||||||||| |  | |||||||||||||||||||||||||||||    
T  49288536 ggcaaattctatggtacaattgaaaatttgagtgtattggtacaccaaatc 49288586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 43137771 - 43137694
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||| |||||||||| | | || ||||| ||||||||||||||||||||    ||||||||||||||||| ||||||    
T  43137771 ggcaagttctatggtacacccaacaatttaagtgtattggtacaccaaattcttaaattaatagttaaatgagttatt 43137694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 271
Target Start/End: Original strand, 46041725 - 46041778
Alignment:
Q  218 aatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||||||||||||| |||||||||||   ||||||||||||||||| ||||||    
T  46041725 aatttgagtgtattgatacaccaaatctttaaattaatagttaaatgagttatt 46041778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 10779398 - 10779335
Alignment:
Q  194 ggcaaattctatggtatatctaa-aaatttgagtgtattggtacaccaaatcaaaaaattaata 256  Q
    |||||||||||||||||||| || ||||||| |||||| |||||||||| ||  ||||||||||    
T  10779398 ggcaaattctatggtatatccaataaatttgggtgtatcggtacaccaagtcgtaaaattaata 10779335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 245
Target Start/End: Original strand, 12756002 - 12756053
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatca 245  Q
    |||||||||||||||| |   |||||||||||||||| ||||||||||||||    
T  12756002 ggcaaattctatggtacactcaaaaatttgagtgtatcggtacaccaaatca 12756053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 193 - 271
Target Start/End: Original strand, 38975276 - 38975352
Alignment:
Q  193 gggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||||||||||||||| | | ||||  ||||||||||| |||||| |||||   ||||||||||||||||| ||||||    
T  38975276 gggcaaattctatggtacacccaaaa--ttgagtgtattagtacacaaaatctttaaattaatagttaaatgagttatt 38975352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 44998411 - 44998474
Alignment:
Q  194 ggcaaattctatggtatatctaa-aaatttgagtgtattggtacaccaaatcaaaaaattaata 256  Q
    |||||||||||||||| | | || ||||||| ||||||||||||||||| ||| ||||||||||    
T  44998411 ggcaaattctatggtacacccaataaatttgggtgtattggtacaccaagtcataaaattaata 44998474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 264
Target Start/End: Original strand, 19842438 - 19842508
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatg 264  Q
    |||||||||||||||| ||| |||||||||||||||   |||||||||||    ||||||||| |||||||    
T  19842438 ggcaaattctatggtacatccaaaaatttgagtgtaccagtacaccaaattgttaaattaataattaaatg 19842508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 264
Target Start/End: Complemental strand, 37519370 - 37519300
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatg 264  Q
    |||||||||||||||||| | ||  |||||| ||||||||||||||| | ||  |||||||||||| ||||    
T  37519370 ggcaaattctatggtatacccaatcatttgaatgtattggtacaccataccattaaattaatagttcaatg 37519300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 264
Target Start/End: Complemental strand, 37523586 - 37523516
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatg 264  Q
    |||||||||||||||||| | ||  |||||| ||||||||||||||| | ||  |||||||||||| ||||    
T  37523586 ggcaaattctatggtatacccaatcatttgaatgtattggtacaccataccattaaattaatagttcaatg 37523516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 264
Target Start/End: Complemental strand, 39380805 - 39380735
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatg 264  Q
    |||||||||||||||| ||  |||||||| ||||||  ||||||||||||||  ||||||| | |||||||    
T  39380805 ggcaaattctatggtacattcaaaaatttaagtgtaccggtacaccaaatcattaaattaacaattaaatg 39380735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 196 - 245
Target Start/End: Complemental strand, 44957323 - 44957274
Alignment:
Q  196 caaattctatggtatatctaaaaatttgagtgtattggtacaccaaatca 245  Q
    |||||||||||||| |   |||||||||||||||| ||||||||||||||    
T  44957323 caaattctatggtacactcaaaaatttgagtgtatcggtacaccaaatca 44957274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 264
Target Start/End: Original strand, 8749330 - 8749398
Alignment:
Q  196 caaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatg 264  Q
    |||||||||||||||||| ||||| || |||||| | |||||| |||||   ||||||||| |||||||    
T  8749330 caaattctatggtatatccaaaaaattaagtgtactcgtacactaaatcgttaaattaataattaaatg 8749398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 241
Target Start/End: Complemental strand, 10973007 - 10972959
Alignment:
Q  194 ggcaaattctatggtatatctaa-aaatttgagtgtattggtacaccaa 241  Q
    |||||||||||||||||||| || ||||||| |||||| ||||||||||    
T  10973007 ggcaaattctatggtatatccaataaatttgggtgtatcggtacaccaa 10972959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 256
Target Start/End: Complemental strand, 23639639 - 23639579
Alignment:
Q  197 aaattctatggtatatctaa-aaatttgagtgtattggtacaccaaatcaaaaaattaata 256  Q
    ||||||||||||| ||| || |||||||||||||| |||||||||| ||  ||||||||||    
T  23639639 aaattctatggtacatccaataaatttgagtgtatcggtacaccaagtcgtaaaattaata 23639579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 256
Target Start/End: Complemental strand, 23645297 - 23645237
Alignment:
Q  197 aaattctatggtatatctaa-aaatttgagtgtattggtacaccaaatcaaaaaattaata 256  Q
    ||||||||||||| ||| || |||||||||||||| |||||||||| ||  ||||||||||    
T  23645297 aaattctatggtacatccaataaatttgagtgtatcggtacaccaagtcgtaaaattaata 23645237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 230
Target Start/End: Complemental strand, 24566771 - 24566735
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtat 230  Q
    |||||||||||||||| | ||||||||||||||||||    
T  24566771 ggcaaattctatggtacacctaaaaatttgagtgtat 24566735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 262
Target Start/End: Original strand, 52940480 - 52940548
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaa 262  Q
    |||||||||||||||| ||| || ||||||||||||  ||| |||||||| |  ||||||||| |||||    
T  52940480 ggcaaattctatggtacatccaacaatttgagtgtaccggtgcaccaaattattaaattaataattaaa 52940548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 264
Target Start/End: Original strand, 55224127 - 55224195
Alignment:
Q  196 caaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatg 264  Q
    |||||||||||||| ||||||| ||| | |||||  ||||||||||||||  ||||||||  |||||||    
T  55224127 caaattctatggtacatctaaatattggggtgtaccggtacaccaaatcattaaattaatgattaaatg 55224195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 62; Significance: 7e-27; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 21051710 - 21051633
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||||| ||||||| |||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  21051710 ggcaaattctatggtacatctaaagatttgaatgtattggtacaccaaatcaataaattaatagttaaatgtgttatt 21051633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 195 - 271
Target Start/End: Complemental strand, 2318831 - 2318755
Alignment:
Q  195 gcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  2318831 gcaaattttatggtatatccaaaaatttgagtgtattggtacacccaatcaacaaattaatagttaaatgtgttatt 2318755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 194 - 271
Target Start/End: Original strand, 28332120 - 28332198
Alignment:
Q  194 ggcaaattctatggtata-tctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||||| | || |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  28332120 ggcaaattctatggtacactcaaaaaatttgagtgtattggtacaccaaatcaacaaattaatagttaaatgtgttatt 28332198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 4618118 - 4618041
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||| ||||||| | |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  4618118 ggcaaattttatggtacacctaaaaatttgagtgtattggtacaccaaatcaataaattaatagttaaatatgttatt 4618041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 197 - 271
Target Start/End: Complemental strand, 13795673 - 13795599
Alignment:
Q  197 aaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||||||||||| ||| ||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||||    
T  13795673 aaattctatggtacatcaaaaaatttgagtgcattggtacacctaatcaataaattaatagttaaatgtgttatt 13795599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 197 - 271
Target Start/End: Original strand, 27116465 - 27116539
Alignment:
Q  197 aaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||| ||||||| | | ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  27116465 aaattttatggtacacccaaaaatttgagtgtattggtacacccaatcaacaaattaatagttaaatgtgttatt 27116539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 194 - 271
Target Start/End: Original strand, 2029353 - 2029430
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||||||| |||||| |||||| ||||| |||||||||||||||||||||   ||||||||||||||||| ||||||    
T  2029353 ggcaaattccatggtacatctaacaatttaagtgtattggtacaccaaatccttaaattaatagttaaatgagttatt 2029430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 6114180 - 6114103
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||||| ||| || ||||||||||||||||| |||||||||   ||||||||||||||||| ||||||    
T  6114180 ggcaaattctatggtacatccaacaatttgagtgtattggtccaccaaatccttaaattaatagttaaatgagttatt 6114103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 12362764 - 12362687
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||||| |   |||||||| |||||||||||||||| |||||| |||||||||||||||||| |||||    
T  12362764 ggcaaattctatggtacactcaaaaatttaagtgtattggtacacccaatcaataaattaatagttaaatgtcttatt 12362687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 196 - 271
Target Start/End: Original strand, 6560828 - 6560903
Alignment:
Q  196 caaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||| | | || |||||||||||||||||||||||||||   ||||||||||||||||| ||||||    
T  6560828 caaattctatggtacacccaataatttgagtgtattggtacaccaaatccttaaattaatagttaaatgagttatt 6560903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 196 - 271
Target Start/End: Original strand, 21605650 - 21605725
Alignment:
Q  196 caaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||| | | || |||||||||||||||||||||||||||   ||||||||||||||||| ||||||    
T  21605650 caaattctatggtacacccaacaatttgagtgtattggtacaccaaatctttaaattaatagttaaatgagttatt 21605725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 188 - 271
Target Start/End: Original strand, 34302640 - 34302723
Alignment:
Q  188 aataagggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||| |||||||||||||||| | | || |||||||||||||||||||| ||||||   ||||||||||||||||| ||||||    
T  34302640 aataaaggcaaattctatggtacacccaataatttgagtgtattggtacatcaaatccttaaattaatagttaaatgagttatt 34302723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 197 - 271
Target Start/End: Original strand, 13090917 - 13090991
Alignment:
Q  197 aaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||||||||||| | | ||| || |||||||||||||||||||||| |  ||||||||||||||||||||||||    
T  13090917 aaattctatggtacacccaaagatatgagtgtattggtacaccaaattattaaattaatagttaaatgtgttatt 13090991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 194 - 271
Target Start/End: Original strand, 9589209 - 9589286
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||||| | | ||| || |||||||||||| |||||||||||  |||||||||||||||| |||||||    
T  9589209 ggcaaattctatggtacacccaaagatatgagtgtattggcacaccaaatcattaaattaatagttaaatatgttatt 9589286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 206 - 271
Target Start/End: Original strand, 36880798 - 36880863
Alignment:
Q  206 ggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||| ||| |||||||| | |||||||||||||| |||||| ||||||||||||||||||||||||    
T  36880798 ggtacatccaaaaatttaaatgtattggtacacccaatcaacaaattaatagttaaatgtgttatt 36880863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 43237759 - 43237682
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||||| | | || ||||||||||||||||||||||||||    ||||||||||||||||| ||||||    
T  43237759 ggcaaattctatggtacacccaataatttgagtgtattggtacaccaaattcttaaattaatagttaaatgagttatt 43237682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 200 - 271
Target Start/End: Complemental strand, 18228859 - 18228788
Alignment:
Q  200 ttctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||| | |||| |||||||||||||||||| ||||||||   ||||||||||||||||| ||||||    
T  18228859 ttctatggtacacctaacaatttgagtgtattggtataccaaatccttaaattaatagttaaatgagttatt 18228788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 197 - 271
Target Start/End: Original strand, 13410545 - 13410619
Alignment:
Q  197 aaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||| ||||||| ||| || ||||||||||||||||||||||||||    ||||||||||||||||| ||||||    
T  13410545 aaattttatggtacatccaacaatttgagtgtattggtacaccaaattcttaaattaatagttaaatgagttatt 13410619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 197 - 271
Target Start/End: Original strand, 14967235 - 14967309
Alignment:
Q  197 aaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||||||||||| | | ||| || ||||||||||||||||| ||||||  |||||| |||||||||||||||||    
T  14967235 aaattctatggtacacccaaagatatgagtgtattggtacactaaatcattaaattagtagttaaatgtgttatt 14967309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 194 - 271
Target Start/End: Original strand, 29743895 - 29743973
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaat-caaaaaattaatagttaaatgtgttatt 271  Q
    |||||||| ||||||| ||  |||||||| |||||||||||||||||||| |  |||||||| ||||||||||||||||    
T  29743895 ggcaaattatatggtacattcaaaaatttaagtgtattggtacaccaaatccttaaaattaagagttaaatgtgttatt 29743973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 1662100 - 1662023
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||| |||||||||| | | || ||||||||||||||||||||| |||||   ||||||||||||||||| ||||||    
T  1662100 ggcaagttctatggtacacccaacaatttgagtgtattggtacacaaaatccttaaattaatagttaaatgggttatt 1662023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 271
Target Start/End: Original strand, 6532579 - 6532656
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||||| | | || ||||| ||||||||||||||||||||    ||||||||||||||||| ||||||    
T  6532579 ggcaaattctatggtacacccaacaatttaagtgtattggtacaccaaattcttaaattaatagttaaatgagttatt 6532656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 197 - 262
Target Start/End: Original strand, 31587996 - 31588061
Alignment:
Q  197 aaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaa 262  Q
    ||||||||||||| | ||||||||||||||||| ||||||||||||| |  ||||||||| |||||    
T  31587996 aaattctatggtacacctaaaaatttgagtgtactggtacaccaaattattaaattaataattaaa 31588061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 271
Target Start/End: Complemental strand, 37431733 - 37431678
Alignment:
Q  219 atttgagtgtattggtacaccaaatca---aaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||||||||||||||||   | ||||||||||||||||||||||||    
T  37431733 atttgagtgtattggtacaccaaatcaattataaattaatagttaaatgtgttatt 37431678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 223 - 271
Target Start/End: Original strand, 41802135 - 41802183
Alignment:
Q  223 gagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||||||||||||  |||||||||||||||| |||||||    
T  41802135 gagtgtattggtacaccaaatcattaaattaatagttaaatatgttatt 41802183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 269
Target Start/End: Original strand, 42917117 - 42917192
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgtta 269  Q
    |||||||||||||||  | | || ||||||||||||||||||||||||||    ||||||||||||||||| ||||    
T  42917117 ggcaaattctatggtgcacccaacaatttgagtgtattggtacaccaaattcttaaattaatagttaaatgagtta 42917192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 271
Target Start/End: Original strand, 2141266 - 2141319
Alignment:
Q  218 aatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||||||||||||||||||||||||    ||||||||||||||||| ||||||    
T  2141266 aatttgagtgtattggtacaccaaattcttaaattaatagttaaatgagttatt 2141319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 271
Target Start/End: Original strand, 2413951 - 2414004
Alignment:
Q  218 aatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||||||||||||||||||||||||    ||||||||||||||||| ||||||    
T  2413951 aatttgagtgtattggtacaccaaattcttaaattaatagttaaatgagttatt 2414004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 271
Target Start/End: Original strand, 9534894 - 9534947
Alignment:
Q  218 aatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||||||||||||||||||||||||    ||||||||||||||||| ||||||    
T  9534894 aatttgagtgtattggtacaccaaattcttaaattaatagttaaatgagttatt 9534947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 245
Target Start/End: Complemental strand, 33145264 - 33145215
Alignment:
Q  196 caaattctatggtatatctaaaaatttgagtgtattggtacaccaaatca 245  Q
    |||||||||||||| | | |||||| ||||||||||||||||||||||||    
T  33145264 caaattctatggtacacccaaaaatatgagtgtattggtacaccaaatca 33145215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 271
Target Start/End: Original strand, 3056386 - 3056462
Alignment:
Q  195 gcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||| |||||||||| | | || ||||| ||||||||||||||||||||    ||||||||||||||||| ||||||    
T  3056386 gcaagttctatggtacacccaacaatttaagtgtattggtacaccaaatttttaaattaatagttaaatgagttatt 3056462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 215 - 271
Target Start/End: Complemental strand, 3425462 - 3425406
Alignment:
Q  215 aaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||| |||| ||||||||||||| ||||| || |||||||||| |||||||||||||    
T  3425462 aaaattttgggtgtattggtacatcaaattaataaattaatagataaatgtgttatt 3425406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 3881832 - 3881895
Alignment:
Q  194 ggcaaattctatggtatatctaa-aaatttgagtgtattggtacaccaaatcaaaaaattaata 256  Q
    |||||||| ||||||||||  || ||||||  ||||||||||||||||||||| ||||||||||    
T  3881832 ggcaaattatatggtatattcaataaatttaggtgtattggtacaccaaatcataaaattaata 3881895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 245
Target Start/End: Complemental strand, 4039878 - 4039827
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatca 245  Q
    |||||||||||| ||| || ||||||||||||||||  ||||||||||||||    
T  4039878 ggcaaattctatagtacatttaaaaatttgagtgtaccggtacaccaaatca 4039827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 271
Target Start/End: Original strand, 24097873 - 24097948
Alignment:
Q  196 caaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||| | | ||  ||||||||||| ||||||||||||| |  |||||||||||| |||| ||||||    
T  24097873 caaattctatggtaaacccaatcatttgagtgtaatggtacaccaaattattaaattaatagttcaatgagttatt 24097948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 204 - 271
Target Start/End: Complemental strand, 35817744 - 35817677
Alignment:
Q  204 atggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||| ||| |||||||||||||||||| |||||||||     ||||||||||||||||| ||||||    
T  35817744 atggtacatccaaaaatttgagtgtattgatacaccaaaattttaaattaatagttaaatgagttatt 35817677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 269
Target Start/End: Original strand, 35682120 - 35682172
Alignment:
Q  217 aaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgtta 269  Q
    |||||||||||||||||||||||| |||   |||||||| |||||||| ||||    
T  35682120 aaatttgagtgtattggtacaccatatccttaaattaattgttaaatgagtta 35682172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 1e-25; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 37465682 - 37465761
Alignment:
Q  192 agggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||||||| ||| |||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||    
T  37465682 agggcaaattctatggtacatccaaaaatttaagtgtattggtacaccaaatcaataaattaatagttaaatatgttatt 37465761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 42444624 - 42444547
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||  ||||||||||||||||||| ||||    
T  42444624 ggcaaattctatggtacatctaaagatttgagtgtattggtacaccaaatcattaaattaatagttaaatgtgctatt 42444547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 194 - 271
Target Start/End: Original strand, 16323559 - 16323636
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||||||||||| || | | ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  16323559 ggcaaattctatgatacacccaaagatttgagtgtattggtacaccaaatcaataaattaatagttaaatgtgttatt 16323636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 194 - 271
Target Start/End: Original strand, 17642074 - 17642151
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||||| ||| ||| || ||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  17642074 ggcaaattctatggtacatccaaagatatgagtgtattggtacaccaaatcattaaattaatagttaaatgtgttatt 17642151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 39347536 - 39347459
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||| ||||||| ||| |||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||    
T  39347536 ggcaaattttatggtacatcaaaaaatttgagtgtattggtacattaaatcaataaattaatagttaaatgtgttatt 39347459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 194 - 270
Target Start/End: Complemental strand, 19718757 - 19718681
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttat 270  Q
    |||||||||||||||| ||| ||||||||||||||||| |||||||||||||  ||||||||| |||||||||||||    
T  19718757 ggcaaattctatggtacatccaaaaatttgagtgtattagtacaccaaatcattaaattaataattaaatgtgttat 19718681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 193 - 271
Target Start/End: Original strand, 2273009 - 2273087
Alignment:
Q  193 gggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||||||||||||||| | | ||| || ||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  2273009 gggcaaattctatggtacacccaaagatatgagtgtattggtacaccaaatcattaaattaatagttaaatgtgttatt 2273087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 26439930 - 26439852
Alignment:
Q  194 ggcaaattctatggtata-tctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||||| | || ||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||||    
T  26439930 ggcaaattctatggtacactcaaaaaatttgagtgcattggtacacccaatcaacaaattaatagttaaatgtgttatt 26439852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 194 - 271
Target Start/End: Original strand, 529267 - 529344
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||||| |   ||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||    
T  529267 ggcaaattctatggtacactaaaaaatttgggtgtattggtacaccaagtcaataaattaatagttaaatgtgttatt 529344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 194 - 271
Target Start/End: Original strand, 43049537 - 43049613
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||||| ||| |||||||||| ||||||||||||||||||||  |||||||| |||||||||||||||    
T  43049537 ggcaaattctatggtacatccaaaaatttgaatgtattggtacaccaaatcattaaattaat-gttaaatgtgttatt 43049613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 193 - 263
Target Start/End: Original strand, 4475045 - 4475114
Alignment:
Q  193 gggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaat 263  Q
    ||||||||||||||||  | | |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  4475045 gggcaaattctatggtc-acccaaaaatttgagtgtattggtacaccaaatcaacaaattaatagttaaat 4475114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 194 - 263
Target Start/End: Complemental strand, 15726296 - 15726227
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaat 263  Q
    |||||||||||||||| ||| || |||||||||||||||||||||||||||   ||||||||||||||||    
T  15726296 ggcaaattctatggtacatccaataatttgagtgtattggtacaccaaatccttaaattaatagttaaat 15726227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 194 - 271
Target Start/End: Original strand, 23286565 - 23286642
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||||| | |||| |||||| ||||||||||||||||||||   ||||||||||||||||| ||||||    
T  23286565 ggcaaattctatggtacacctaacaatttgcgtgtattggtacaccaaatccttaaattaatagttaaatgagttatt 23286642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 43485447 - 43485370
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||| ||||||| |   |||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  43485447 ggcaaattttatggtacactcaaaattttgagtgtattggtacatcaaatcaataaattaatagttaaatgtgttatt 43485370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 194 - 264
Target Start/End: Original strand, 29773445 - 29773515
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatg 264  Q
    |||||||||||||||| | | || |||||||||||||||||||||||||||   |||||||||||||||||    
T  29773445 ggcaaattctatggtacacccaacaatttgagtgtattggtacaccaaatccttaaattaatagttaaatg 29773515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 194 - 271
Target Start/End: Original strand, 945976 - 946053
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||||||||| |||| ||| ||  ||||||||||||||||||||||||||   ||||||||||||||||| ||||||    
T  945976 ggcaaattctacggtacatccaaccatttgagtgtattggtacaccaaatctttaaattaatagttaaatgagttatt 946053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 14498709 - 14498632
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||| |||||||||| | | || |||||||||||||||||||||||||||   ||||||||||||||||| ||||||    
T  14498709 ggcaagttctatggtacacccaacaatttgagtgtattggtacaccaaatccttaaattaatagttaaatgagttatt 14498632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 194 - 271
Target Start/End: Original strand, 28090192 - 28090269
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||||| | | || ||||||||| |||||||||||||||||   ||||||||||||||||| ||||||    
T  28090192 ggcaaattctatggtacacccaataatttgagtatattggtacaccaaatccttaaattaatagttaaatgagttatt 28090269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 194 - 271
Target Start/End: Original strand, 36002356 - 36002433
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||| |||||||||| ||| || |||||||||||||| ||||||||||||   ||||||||||||||||| ||||||    
T  36002356 ggcaagttctatggtacatccaacaatttgagtgtattagtacaccaaatccttaaattaatagttaaatgagttatt 36002433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 194 - 271
Target Start/End: Original strand, 37511088 - 37511165
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||||||| |||||| | | || |||||||||||||||||||||||||||   ||||||||||||||||| ||||||    
T  37511088 ggcaaattcgatggtacacccaacaatttgagtgtattggtacaccaaatctttaaattaatagttaaatgagttatt 37511165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 196 - 263
Target Start/End: Original strand, 43921127 - 43921194
Alignment:
Q  196 caaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaat 263  Q
    |||||| ||||||||| ||||| |||||||||||||||||||||||||||   || ||||||||||||    
T  43921127 caaattttatggtatacctaaagatttgagtgtattggtacaccaaatcattgaactaatagttaaat 43921194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 194 - 268
Target Start/End: Complemental strand, 6800178 - 6800104
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgtt 268  Q
    |||||||| ||||||| |   ||| |||||||||||||||||||||||||||   ||||||||||||||||||||    
T  6800178 ggcaaattttatggtacactcaaagatttgagtgtattggtacaccaaatcattgaattaatagttaaatgtgtt 6800104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 196 - 270
Target Start/End: Complemental strand, 36886566 - 36886492
Alignment:
Q  196 caaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttat 270  Q
    |||||| ||||||| |||||||||||||||| ||| |||||||||||| |  ||||||||| |||||| ||||||    
T  36886566 caaattttatggtacatctaaaaatttgagtatatcggtacaccaaattattaaattaataattaaatatgttat 36886492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 271
Target Start/End: Original strand, 10280584 - 10280637
Alignment:
Q  218 aatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||||||||||||||||   ||||||||||||||||| ||||||    
T  10280584 aatttgagtgtattggtacaccaaatctttaaattaatagttaaatgagttatt 10280637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 13483302 - 13483225
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||||| |   |||| |||| ||||||||| ||| |||||||| |||||||||| |||||||||||||    
T  13483302 ggcaaattctatggtacactcaaaattttgggtgtattgggacatcaaatcaataaattaatagataaatgtgttatt 13483225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 271
Target Start/End: Original strand, 38502184 - 38502261
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||| |||||||||| | | || ||||| |||||||||||||||||||||   ||||||||||||||||| ||||||    
T  38502184 ggcaagttctatggtacacccaacaatttaagtgtattggtacaccaaatccttaaattaatagttaaatgagttatt 38502261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 37405009 - 37404946
Alignment:
Q  194 ggcaaattctatggtatatctaa-aaatttgagtgtattggtacaccaaatcaaaaaattaata 256  Q
    ||||||||||||| ||||||||| ||||||| |||||| |||||||||| ||| ||||||||||    
T  37405009 ggcaaattctatgatatatctaataaatttgggtgtatcggtacaccaagtcataaaattaata 37404946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 271
Target Start/End: Original strand, 44934901 - 44934976
Alignment:
Q  196 caaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||| | | || ||||||| |||||||||||| ||||||   ||||||||||||||||| ||||||    
T  44934901 caaattctatggtacacccaacaatttgaatgtattggtacatcaaatccttaaattaatagttaaatgagttatt 44934976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 2666505 - 2666566
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaat 255  Q
    |||||||||||||||| |||||| | |||||||||| |||||||||||| ||  ||||||||    
T  2666505 ggcaaattctatggtacatctaacattttgagtgtactggtacaccaaagcattaaattaat 2666566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 29229583 - 29229506
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||||| | | ||  |||||||||||||||||||||||||    |||||||||||||| || ||||||    
T  29229583 ggcaaattctatggtacacccaaccatttgagtgtattggtacaccaaattcttaaattaatagttaagtgagttatt 29229506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 271
Target Start/End: Original strand, 34332112 - 34332189
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||||| | | || ||||| |||| |||||||||||||||    ||||||||||||||||| ||||||    
T  34332112 ggcaaattctatggtacacccaataatttaagtgcattggtacaccaaattcttaaattaatagttaaatgagttatt 34332189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 28897310 - 28897247
Alignment:
Q  194 ggcaaattctatggtatatctaa-aaatttgagtgtattggtacaccaaatcaaaaaattaata 256  Q
    |||||||||||||||| | | || ||||||| ||||||||||||||||| ||| ||||||||||    
T  28897310 ggcaaattctatggtacacccaataaatttgggtgtattggtacaccaagtcataaaattaata 28897247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 244
Target Start/End: Original strand, 12801107 - 12801157
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatc 244  Q
    |||||||||||||||| | | |||||||||||||||  |||||||||||||    
T  12801107 ggcaaattctatggtacacccaaaaatttgagtgtaccggtacaccaaatc 12801157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 271
Target Start/End: Original strand, 23274646 - 23274699
Alignment:
Q  218 aatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||||||||||||||| |||||||||   ||||||||||||||| | ||||||    
T  23274646 aatttgagtgtattggtgcaccaaatctttaaattaatagttaaaggagttatt 23274699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 193 - 242
Target Start/End: Original strand, 27847457 - 27847506
Alignment:
Q  193 gggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaa 242  Q
    ||||||||||||||||| ||| || | |||||||||| ||||||||||||    
T  27847457 gggcaaattctatggtacatccaatattttgagtgtactggtacaccaaa 27847506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 271
Target Start/End: Original strand, 37161528 - 37161581
Alignment:
Q  218 aatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||||||||||| |||||| ||||||   ||||||||||||||||| ||||||    
T  37161528 aatttgagtgtataggtacatcaaatccttaaattaatagttaaatgagttatt 37161581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 1e-25; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 188 - 271
Target Start/End: Original strand, 19547483 - 19547566
Alignment:
Q  188 aataagggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||| |||||||||||||||| ||| |||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||    
T  19547483 aataatggcaaattctatggtacatccaaaaatttgagtgtatcggtacacccaatcaacaaattaatagttaaatgtgttatt 19547566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 197 - 271
Target Start/End: Original strand, 3136273 - 3136347
Alignment:
Q  197 aaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||||||| ||| ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  3136273 aaattctattgtacatctaaaaatttgggtgtattggtacaccaaatcaataaattaatagttaaatgtgttatt 3136347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 25592412 - 25592335
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||| ||||||| ||| |||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||    
T  25592412 ggcaaattatatggtacatccaaaaatttgagtgtattgatacaccaaatcaataaattaatagtttaatgtgttatt 25592335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 194 - 271
Target Start/End: Original strand, 27647478 - 27647555
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||||| |   ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  27647478 ggcaaattctatggtacactcaaaaatttgagtgtattggtacacccaatcaacaaattaatagttaaatgtgttatt 27647555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 53516987 - 53516910
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||||| |  |||||||||||||||||||||||||| |||||| |||||||||||||||||| |||||    
T  53516987 ggcaaattctatggtacacttaaaaatttgagtgtattggtacacccaatcaacaaattaatagttaaatgtattatt 53516910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 197 - 271
Target Start/End: Original strand, 7671806 - 7671880
Alignment:
Q  197 aaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||||||||||| | | ||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||    
T  7671806 aaattctatggtacacccaaaaatttgagtgtattggtacacccaataaacaaattaatagttaaatgtgttatt 7671880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 21289219 - 21289142
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||||| |   |||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||    
T  21289219 ggcaaattctatggtacactcaaaaatttgagtgtataggtacacccaatcaacaaattaatagttaaatgtgttatt 21289142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 43715154 - 43715077
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||||| ||| ||||||||| |||||||||||||||||||||| ||| ||||||||||| || |||||    
T  43715154 ggcaaattctatggtacatccaaaaatttgggtgtattggtacaccaaatcaataaactaatagttaaacgtattatt 43715077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 4663544 - 4663467
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||| |||||||||| |   |||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  4663544 ggcaagttctatggtacactcaaaattttgagtgtattggtacatcaaatcaataaattaatagttaaatgtgttatt 4663467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 194 - 271
Target Start/End: Original strand, 11140247 - 11140324
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||||| | | || |||||||||||||||||||||||||||   ||||||||||||||||| ||||||    
T  11140247 ggcaaattctatggtacacccaataatttgagtgtattggtacaccaaatccttaaattaatagttaaatgagttatt 11140324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 194 - 271
Target Start/End: Original strand, 31308877 - 31308954
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||||| | |||| |||||||||||||||| ||||||||||   ||||||||||||||||| ||||||    
T  31308877 ggcaaattctatggtacacctaacaatttgagtgtattggaacaccaaatccttaaattaatagttaaatgagttatt 31308954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 194 - 271
Target Start/End: Original strand, 40650067 - 40650144
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||| |||||||||| | |||| |||||||||||||||||||||||||||   ||||||||||||||||| ||||||    
T  40650067 ggcaagttctatggtacaactaacaatttgagtgtattggtacaccaaatccttaaattaatagttaaatgagttatt 40650144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 194 - 271
Target Start/End: Original strand, 42067579 - 42067656
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||||| | | || |||||||||||||||||||||||||||   ||||||||||||||||| ||||||    
T  42067579 ggcaaattctatggtacacccaacaatttgagtgtattggtacaccaaatccttaaattaatagttaaatgagttatt 42067656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 197 - 271
Target Start/End: Complemental strand, 29347663 - 29347589
Alignment:
Q  197 aaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||||||||||| | | || |||||||||||||||||||||||||||   ||||||||||||||||| ||||||    
T  29347663 aaattctatggtacacccaacaatttgagtgtattggtacaccaaatctttaaattaatagttaaatgagttatt 29347589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 29787003 - 29786926
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||||| | | || ||||||||||||||||||||||||||    ||||||||||||||||| ||||||    
T  29787003 ggcaaattctatggtacacccaacaatttgagtgtattggtacaccaaattcttaaattaatagttaaatgagttatt 29786926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 38785488 - 38785411
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||| ||||||| | | || |||||||||||||||||||||||||||   ||||||||||||||||| ||||||    
T  38785488 ggcaaattatatggtacacccaataatttgagtgtattggtacaccaaatccttaaattaatagttaaatgagttatt 38785411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 194 - 263
Target Start/End: Complemental strand, 42364333 - 42364264
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaat 263  Q
    |||||||||||||||| | | || |||||||||||||||||||||||||||   ||||||||||||||||    
T  42364333 ggcaaattctatggtacacccaataatttgagtgtattggtacaccaaatccttaaattaatagttaaat 42364264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 876628 - 876551
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||| ||||||| | | || ||||| |||||||||||||||||||||   ||||||||||||||||| ||||||    
T  876628 ggcaaattatatggtacacccaacaatttaagtgtattggtacaccaaatccttaaattaatagttaaatgagttatt 876551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 271
Target Start/End: Complemental strand, 27082728 - 27082675
Alignment:
Q  218 aatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||||||||||||||||   ||||||||||||||||| ||||||    
T  27082728 aatttgagtgtattggtacaccaaatccttaaattaatagttaaatgagttatt 27082675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 35171599 - 35171522
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||| |||||||||| | | || ||||||||||||||||||||||||| |   ||||||||||||||||| ||||||    
T  35171599 ggcaagttctatggtacacccaacaatttgagtgtattggtacaccaaacccttaaattaatagttaaatgagttatt 35171522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 44670664 - 44670587
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||||||||| |||| | | || ||||||||||||||||||||| |||||   ||||||||||||||||| ||||||    
T  44670664 ggcaaattctaaggtacacccaacaatttgagtgtattggtacacaaaatccttaaattaatagttaaatgagttatt 44670587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 215 - 271
Target Start/End: Original strand, 32717674 - 32717730
Alignment:
Q  215 aaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||||||  ||||| ||||||| |||||||||||||||||| |||||    
T  32717674 aaaaatttgagtgtattaatacactaaatcaataaattaatagttaaatgtattatt 32717730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 195 - 263
Target Start/End: Original strand, 39289247 - 39289315
Alignment:
Q  195 gcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaat 263  Q
    ||||||||||| ||| |||||||||||||||| || ||||| |||||||||  ||||||||| ||||||    
T  39289247 gcaaattctatagtacatctaaaaatttgagtctagtggtaaaccaaatcattaaattaataattaaat 39289315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 245
Target Start/End: Complemental strand, 29698729 - 29698678
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatca 245  Q
    |||||||||||||||||||  |||||||||||||||  ||||||||||||||    
T  29698729 ggcaaattctatggtatattcaaaaatttgagtgtaccggtacaccaaatca 29698678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 220 - 271
Target Start/End: Original strand, 45518664 - 45518715
Alignment:
Q  220 tttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||||| |||| ||||| |||| |||||||||||||||||||    
T  45518664 tttgagtgtattggtataccagatcaataaatcaatagttaaatgtgttatt 45518715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 264
Target Start/End: Complemental strand, 27079761 - 27079715
Alignment:
Q  218 aatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatg 264  Q
    |||||||||||||||||||||||||||   |||||||||||||||||    
T  27079761 aatttgagtgtattggtacaccaaatccttaaattaatagttaaatg 27079715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 29629389 - 29629314
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||| | ||||||| | | ||||||||  |||||||||||||||||||||| ||||||||  ||||||||||||||    
T  29629389 ggcaaactttatggtacaccaaaaaatttaggtgtattggtacaccaaatcaataaattaat--ttaaatgtgttatt 29629314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 264
Target Start/End: Original strand, 4659757 - 4659826
Alignment:
Q  195 gcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatg 264  Q
    ||||||||||| ||||| | |||||||| || ||||||||||| ||||||   |||||||||||||||||    
T  4659757 gcaaattctatagtataccaaaaaatttaagggtattggtacaacaaatctttaaattaatagttaaatg 4659826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 261
Target Start/End: Complemental strand, 5532449 - 5532384
Alignment:
Q  196 caaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaa 261  Q
    |||||||||||||| ||||||| |||||||||||  |||||||||||| |  ||||||||| ||||    
T  5532449 caaattctatggtacatctaaatatttgagtgtaccggtacaccaaataattaaattaatatttaa 5532384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 271
Target Start/End: Original strand, 44365621 - 44365698
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||||||||||| || | | || ||||| ||||||||||||||||||||    ||||||||||||||||| ||||||    
T  44365621 ggcaaattctatgatacacccaacaatttaagtgtattggtacaccaaattcttaaattaatagttaaatgagttatt 44365698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 271
Target Start/End: Original strand, 45636089 - 45636166
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||||||||| |||| | | || |||||||||||||||||||||| |||    ||||||||||||||||| ||||||    
T  45636089 ggcaaattctagggtacacccaacaatttgagtgtattggtacaccgaatttttaaattaatagttaaatgagttatt 45636166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 215 - 263
Target Start/End: Original strand, 34593714 - 34593762
Alignment:
Q  215 aaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaat 263  Q
    |||||||||||||||||| |||||||||||   ||||||||||||||||    
T  34593714 aaaaatttgagtgtattgttacaccaaatctttaaattaatagttaaat 34593762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 42848614 - 42848535
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggt--acaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||| |||||||||| | | || |||||||||||||||||  ||||||||||   ||||||||||||||||| ||||||    
T  42848614 ggcaagttctatggtacacccaacaatttgagtgtattggtgcacaccaaatccttaaattaatagttaaatgagttatt 42848535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 197 - 264
Target Start/End: Original strand, 31479559 - 31479626
Alignment:
Q  197 aaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatg 264  Q
    ||||| ||||||| | |||||||||||||||||| ||||||||||||    ||||||||| |||||||    
T  31479559 aaattatatggtacacctaaaaatttgagtgtatcggtacaccaaattgttaaattaataattaaatg 31479626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 44962602 - 44962665
Alignment:
Q  194 ggcaaattctatggtatatctaa-aaatttgagtgtattggtacaccaaatcaaaaaattaata 256  Q
    |||||||||||||||| ||| || ||||||| ||||||||||||||||| ||  ||||||||||    
T  44962602 ggcaaattctatggtacatccaataaatttgggtgtattggtacaccaagtcgtaaaattaata 44962665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 39630297 - 39630219
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaatt-aatagttaaatgtgttatt 271  Q
    |||||||||||||||| ||| || |||||||||||||| ||||||| |||    ||||| |||||||||||| ||||||    
T  39630297 ggcaaattctatggtacatccaacaatttgagtgtattagtacaccgaatttttaaattaaatagttaaatgagttatt 39630219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 244
Target Start/End: Original strand, 46936659 - 46936709
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatc 244  Q
    |||||||||||||||| | | |||||||||||||||  |||||||||||||    
T  46936659 ggcaaattctatggtacaccaaaaaatttgagtgtaccggtacaccaaatc 46936709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 271
Target Start/End: Complemental strand, 47948802 - 47948724
Alignment:
Q  193 gggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||| ||||||| || | | || ||||| |||| ||||||||||||||||   ||||||||||||||||| ||||||    
T  47948802 gggcaagttctatgatacacccaacaatttaagtgcattggtacaccaaatccttaaattaatagttaaatgagttatt 47948724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 260
Target Start/End: Original strand, 6890431 - 6890496
Alignment:
Q  195 gcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagtta 260  Q
    |||||||||||||||| |  |||||||||| |||||||||||| |||||    |||||||||||||    
T  6890431 gcaaattctatggtattttcaaaaatttgaatgtattggtacatcaaatttttaaattaatagtta 6890496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 196 - 245
Target Start/End: Original strand, 43903074 - 43903123
Alignment:
Q  196 caaattctatggtatatctaaaaatttgagtgtattggtacaccaaatca 245  Q
    |||||||||||||| |  ||||||||||||||||  ||||||||||||||    
T  43903074 caaattctatggtacacttaaaaatttgagtgtaccggtacaccaaatca 43903123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 263
Target Start/End: Original strand, 44568583 - 44568651
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaat 263  Q
    |||||||||||||||| | |||| | ||||||||||| ||||||||||| ||  ||||||||| ||||||    
T  44568583 ggcaaattctatggtacacctaacattttgagtgtatcggtacaccaaa-cattaaattaataattaaat 44568651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0625 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0625
Description:

Target: scaffold0625; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 6669 - 6592
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||||| | | |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  6669 ggcaaattctatggtacaccaaaaaatttgagtgtattggtacaccaaatcaataaattaatagttaaatatgttatt 6592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 2e-24; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 194 - 271
Target Start/End: Original strand, 18990091 - 18990168
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||||| | | |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  18990091 ggcaaattctatggtacaccaaaaaatttgagtgtattggtacaccaaatcaataaattaatagttaaatatgttatt 18990168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 194 - 271
Target Start/End: Original strand, 43750075 - 43750152
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||||| |   ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  43750075 ggcaaattctatggtacactcaaaaatttgagtgtattggtacacccaatcaacaaattaatagttaaatgtgttatt 43750152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 211 - 271
Target Start/End: Original strand, 30317212 - 30317272
Alignment:
Q  211 atctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  30317212 atctaaaaatttgggtgtattggtacaccaaatcaataaattaatagttaaatgtgttatt 30317272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 45857880 - 45857803
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||||| | | ||| || ||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  45857880 ggcaaattctatggtacacccaaagatatgagtgtattggtacaccaaatcattaaattaatagttaaatgtgttatt 45857803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 191 - 271
Target Start/End: Original strand, 11485993 - 11486073
Alignment:
Q  191 aagggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||||||||||||||||| | | ||| |||| || |||||||||||||||||||  ||||||||||||||||||||||||    
T  11485993 aagggcaaattctatggtacacccaaagatttaagagtattggtacaccaaatcattaaattaatagttaaatgtgttatt 11486073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 215 - 271
Target Start/End: Complemental strand, 20439200 - 20439144
Alignment:
Q  215 aaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||||||||||||||||||||||| |||||| ||||||||| ||||||||||||||    
T  20439200 aaaaatttgagtgtattggtacacccaatcaacaaattaataattaaatgtgttatt 20439144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 194 - 271
Target Start/End: Original strand, 27956377 - 27956455
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatc-aaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||||| | |||| ||||||||| |||||||||||||||||   |||||||||||||||||| ||||||    
T  27956377 ggcaaattctatggtacacctaacaatttgagtatattggtacaccaaatctttaaaattaatagttaaatgagttatt 27956455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 197 - 271
Target Start/End: Original strand, 28326684 - 28326758
Alignment:
Q  197 aaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||||||| ||| ||| || |||||||||||||||||||||||||||   ||||||||||||||||| ||||||    
T  28326684 aaattctatcgtacatccaataatttgagtgtattggtacaccaaatccttaaattaatagttaaatgagttatt 28326758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 194 - 263
Target Start/End: Complemental strand, 41913500 - 41913431
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaat 263  Q
    |||||||| ||||||| ||| || |||||||||||||||||||||||||||   ||||||||||||||||    
T  41913500 ggcaaattatatggtacatccaacaatttgagtgtattggtacaccaaatccttaaattaatagttaaat 41913431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 194 - 271
Target Start/End: Original strand, 42710931 - 42711008
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||||| |||||| ||||| |||| |||||||||||||||    ||||||||||||||||| ||||||    
T  42710931 ggcaaattctatggtacatctaataatttaagtgcattggtacaccaaattcttaaattaatagttaaatgagttatt 42711008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 194 - 271
Target Start/End: Original strand, 42974895 - 42974972
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||||| | | ||| || |||||| |||||||||||||||||  |||||| |||||||||||||||||    
T  42974895 ggcaaattctatggtacacccaaacatatgagtgcattggtacaccaaatcattaaattagtagttaaatgtgttatt 42974972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 194 - 263
Target Start/End: Complemental strand, 44964227 - 44964158
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaat 263  Q
    |||||||| ||||||| | ||||| ||||||||||||||||||| |||||||  ||||||||||||||||    
T  44964227 ggcaaattatatggtacacctaaagatttgagtgtattggtacaacaaatcattaaattaatagttaaat 44964158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 197 - 271
Target Start/End: Complemental strand, 1691394 - 1691320
Alignment:
Q  197 aaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||||||||||| ||| ||  ||||||||||||||||||| ||||||   ||||||||||||||||| ||||||    
T  1691394 aaattctatggtacatccaaccatttgagtgtattggtacatcaaatccttaaattaatagttaaatgagttatt 1691320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 271
Target Start/End: Original strand, 3909928 - 3910005
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||||| | | || |||||||||||||||||||||| |||    ||||||||||||||||| ||||||    
T  3909928 ggcaaattctatggtacacccaacaatttgagtgtattggtacaccgaatttttaaattaatagttaaatgagttatt 3910005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 30624129 - 30624052
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||| |||||||||| | | || ||||||||||||||||||||||||||    ||||||||||||||||| ||||||    
T  30624129 ggcaagttctatggtacacccaataatttgagtgtattggtacaccaaatttttaaattaatagttaaatgagttatt 30624052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 271
Target Start/End: Original strand, 30862789 - 30862866
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||| |||||||||| | | || ||||| |||||||||||||||||||||   ||||||||||||||||| ||||||    
T  30862789 ggcaagttctatggtacacccaacaatttaagtgtattggtacaccaaatccttaaattaatagttaaatgagttatt 30862866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 38129791 - 38129714
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||| |||||||||| | | || ||||||||||||||||||||||||||    ||||||||||||||||| ||||||    
T  38129791 ggcaagttctatggtagacccaataatttgagtgtattggtacaccaaatttttaaattaatagttaaatgagttatt 38129714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 271
Target Start/End: Original strand, 41331729 - 41331806
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||| || ||||||| | |||| |||||||||||||||||||||||||||   |||| |||||||||||| ||||||    
T  41331729 ggcaagttttatggtacacctaacaatttgagtgtattggtacaccaaatccttaaatcaatagttaaatgagttatt 41331806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 226 - 270
Target Start/End: Complemental strand, 8770739 - 8770695
Alignment:
Q  226 tgtattggtacaccaaatcaaaaaattaatagttaaatgtgttat 270  Q
    ||||||||||||||||||||  |||||||||||||||||||||||    
T  8770739 tgtattggtacaccaaatcattaaattaatagttaaatgtgttat 8770695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 215 - 271
Target Start/End: Original strand, 41809223 - 41809279
Alignment:
Q  215 aaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||| ||||||||||||||||||||||||||  |||||| ||||||||||| |||||    
T  41809223 aaaattttgagtgtattggtacaccaaatcattaaattagtagttaaatgtattatt 41809279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 198 - 265
Target Start/End: Original strand, 31482378 - 31482445
Alignment:
Q  198 aattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgt 265  Q
    |||||||||||| |   ||| |||||||||||||||||||||||||||   |||||||||||||||||    
T  31482378 aattctatggtacactcaaatatttgagtgtattggtacaccaaatcattgaattaatagttaaatgt 31482445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 271
Target Start/End: Original strand, 40941877 - 40941952
Alignment:
Q  196 caaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||| |   || ||||||||||||||||||||| |||||   ||||||||||||||||| ||||||    
T  40941877 caaattctatggtacactcaacaatttgagtgtattggtacacaaaatctttaaattaatagttaaatgagttatt 40941952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 264
Target Start/End: Complemental strand, 9682432 - 9682362
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatg 264  Q
    |||||||| ||||||  ||| |||||||||||||||  ||||||||||||||  ||||||||| |||||||    
T  9682432 ggcaaattttatggtgcatccaaaaatttgagtgtaccggtacaccaaatcattaaattaataattaaatg 9682362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 264
Target Start/End: Complemental strand, 21699691 - 21699625
Alignment:
Q  198 aattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatg 264  Q
    |||||||||||| | | || ||||| |||||||||||||||||||||   |||||||||||||||||    
T  21699691 aattctatggtacacccaacaatttaagtgtattggtacaccaaatccttaaattaatagttaaatg 21699625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 244
Target Start/End: Original strand, 23331700 - 23331750
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatc 244  Q
    |||||||||||||||| |  ||| |||||||||||||||||||||||||||    
T  23331700 ggcaaattctatggtacacttaacaatttgagtgtattggtacaccaaatc 23331750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 244
Target Start/End: Complemental strand, 27800434 - 27800384
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatc 244  Q
    |||||||||||||||| ||| |||||||||||||||  |||||||||||||    
T  27800434 ggcaaattctatggtacatccaaaaatttgagtgtaccggtacaccaaatc 27800384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 197 - 267
Target Start/End: Complemental strand, 30936495 - 30936425
Alignment:
Q  197 aaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgt 267  Q
    |||||||||| || | | ||| || ||||||||||||||||| ||||||  ||||||||||||||||||||    
T  30936495 aaattctatgatacacccaaagatatgagtgtattggtacacaaaatcattaaattaatagttaaatgtgt 30936425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 244
Target Start/End: Complemental strand, 40856941 - 40856891
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatc 244  Q
    |||||||||||||||| |||||||||||||||| ||  |||||||||||||    
T  40856941 ggcaaattctatggtacatctaaaaatttgagtataccggtacaccaaatc 40856891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 271
Target Start/End: Original strand, 43069080 - 43069155
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||| ||||||| | ||||| | ||||||||||||||||||||||| |  ||||||||||  ||||||||||||    
T  43069080 ggcaaattttatggtacacctaaagacttgagtgtattggtacaccaaattattaaattaatag--aaatgtgttatt 43069155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 197 - 271
Target Start/End: Complemental strand, 47748205 - 47748131
Alignment:
Q  197 aaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||| ||||||| | |||||||||||| |||||||||| ||||| ||   ||||||||||||||||| ||||||    
T  47748205 aaattttatggtacacctaaaaatttgaatgtattggtataccaagtccttaaattaatagttaaatgagttatt 47748131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 271
Target Start/End: Original strand, 41381497 - 41381574
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||| ||||||| | | || |||||||||||||||||||| ||||||   ||| ||||||||||||| ||||||    
T  41381497 ggcaaattatatggtacaccaaacaatttgagtgtattggtacatcaaatctttaaagtaatagttaaatgagttatt 41381574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 42902793 - 42902730
Alignment:
Q  194 ggcaaattctatggtatatctaa-aaatttgagtgtattggtacaccaaatcaaaaaattaata 256  Q
    |||||||||||||||| | |||| ||||||| ||||||||||||||||| ||  ||||||||||    
T  42902793 ggcaaattctatggtacacctaataaatttgggtgtattggtacaccaagtcgtaaaattaata 42902730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 243
Target Start/End: Complemental strand, 29689331 - 29689282
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaat 243  Q
    |||||||||||||||| |   ||||||||||||||| |||||||||||||    
T  29689331 ggcaaattctatggtacactcaaaaatttgagtgtactggtacaccaaat 29689282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 192 - 257
Target Start/End: Original strand, 45458696 - 45458761
Alignment:
Q  192 agggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatag 257  Q
    ||||||||||||||| || | | || ||||| |||||||||||||||||||||   ||||||||||    
T  45458696 agggcaaattctatgttacacccaacaatttaagtgtattggtacaccaaatccttaaattaatag 45458761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 2e-24; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 6265340 - 6265263
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||||| |||||||||||||||||||||| ||| ||||||||| |||||||||||| |||||||||||    
T  6265340 ggcaaattctatggtacatctaaaaatttgagtgtattgataccccaaatcaataaattaatagtttaatgtgttatt 6265263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 194 - 271
Target Start/End: Original strand, 11446736 - 11446813
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||||| | | ||| || ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  11446736 ggcaaattctatggtacacccaaagatatgagtgtattggtacaccaaatcaataaattaatagttaaatgtgttatt 11446813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 197 - 271
Target Start/End: Complemental strand, 30020761 - 30020687
Alignment:
Q  197 aaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||||||||||| ||| |||| ||||||||||||| || |||||||||| ||||||||||||||||||||||||    
T  30020761 aaattctatggtacatccaaaagtttgagtgtattgatataccaaatcaataaattaatagttaaatgtgttatt 30020687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 32834180 - 32834103
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||||| | |||| ||||||||||||||||||||||||||||  |||||||||||| |||| ||||||    
T  32834180 ggcaaattctatggtacacctaataatttgagtgtattggtacaccaaatcattaaattaatagttcaatgagttatt 32834103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 195 - 271
Target Start/End: Complemental strand, 8376429 - 8376353
Alignment:
Q  195 gcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||||| ||||||| ||||| |||||||| |||||||||||||||| |||| |||||| |||||||||||||||||    
T  8376429 gcaaattttatggtacatctacaaatttgaatgtattggtacaccaagtcaataaattattagttaaatgtgttatt 8376353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 15383610 - 15383533
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||| ||||||| ||| ||||||||||||||||||||| |||||||||  |||||| ||||||||| |||||||    
T  15383610 ggcaaattatatggtacatccaaaaatttgagtgtattggtataccaaatcagtaaattattagttaaatatgttatt 15383533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 196 - 271
Target Start/End: Original strand, 2258905 - 2258980
Alignment:
Q  196 caaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||| | | || ||||||||||||||||||||| |||||   ||||||||||||||||| ||||||    
T  2258905 caaattctatggtacacccaacaatttgagtgtattggtacactaaatccttaaattaatagttaaatgagttatt 2258980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 194 - 264
Target Start/End: Original strand, 24212912 - 24212982
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatg 264  Q
    |||||||||||||||| ||| ||  |||||||||||||||||||| |||||   |||||||||||||||||    
T  24212912 ggcaaattctatggtacatccaaccatttgagtgtattggtacactaaatccttaaattaatagttaaatg 24212982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 8401822 - 8401745
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||| ||||||| ||| ||  ||||||||||||| ||||||||||||   ||||||||||||||||| ||||||    
T  8401822 ggcaaattatatggtacatccaaccatttgagtgtattcgtacaccaaatctttaaattaatagttaaatgagttatt 8401745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 271
Target Start/End: Original strand, 13390385 - 13390462
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||| |||||||||| | | || ||||| |||||||||||||||||||||   ||||||||||||||||| ||||||    
T  13390385 ggcaagttctatggtacacccaacaatttaagtgtattggtacaccaaatccttaaattaatagttaaatgagttatt 13390462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 271
Target Start/End: Complemental strand, 24487669 - 24487616
Alignment:
Q  218 aatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||||||||||||||||   ||||||||||||||||| ||||||    
T  24487669 aatttgagtgtattggtacaccaaatctttaaattaatagttaaatgagttatt 24487616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 26358959 - 26358882
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||| |||||||||| | | || ||||||||||||||||||||||||| |   ||||||||||||||||| ||||||    
T  26358959 ggcaagttctatggtacacccaacaatttgagtgtattggtacaccaaacccttaaattaatagttaaatgagttatt 26358882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 196 - 264
Target Start/End: Complemental strand, 4901353 - 4901285
Alignment:
Q  196 caaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatg 264  Q
    |||||| ||||||| |||||| ||||||||||||||||||||  |||||   |||||||||||||||||    
T  4901353 caaattttatggtacatctaacaatttgagtgtattggtacattaaatccttaaattaatagttaaatg 4901285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 263
Target Start/End: Original strand, 17545607 - 17545674
Alignment:
Q  196 caaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaat 263  Q
    |||||||||||||| | | || ||||||||||||||||||||||||||    ||||||||||||||||    
T  17545607 caaattctatggtacacccaacaatttgagtgtattggtacaccaaattcttaaattaatagttaaat 17545674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 271
Target Start/End: Original strand, 6848510 - 6848587
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||||| | | || |||||||||| ||||||| || |||||   ||||||||||||||||| ||||||    
T  6848510 ggcaaattctatggtacacccaacaatttgagtgcattggtatacaaaatccttaaattaatagttaaatgagttatt 6848587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 226 - 271
Target Start/End: Original strand, 17010393 - 17010438
Alignment:
Q  226 tgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||| ||||||||| |||| ||||||||||||||||||||||||    
T  17010393 tgtattagtacaccaattcaataaattaatagttaaatgtgttatt 17010438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 34196215 - 34196138
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||| ||||||| |   |||||||||||||||||| |  | |||||||| |||||||||||||||| |||||||    
T  34196215 ggcaaattttatggtacactcaaaaatttgagtgtattgattaatcaaatcaataaattaatagttaaatatgttatt 34196138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 1338853 - 1338916
Alignment:
Q  194 ggcaaattctatggtatatctaa-aaatttgagtgtattggtacaccaaatcaaaaaattaata 256  Q
    |||||||||||||||| ||| || ||||||| |||||| |||||||||| ||| ||||||||||    
T  1338853 ggcaaattctatggtacatccaataaatttgggtgtatcggtacaccaagtcataaaattaata 1338916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 245
Target Start/End: Original strand, 1705606 - 1705657
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatca 245  Q
    |||||||||||||||| |   |||||||||||||||| ||||||||||||||    
T  1705606 ggcaaattctatggtacactcaaaaatttgagtgtatcggtacaccaaatca 1705657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 18870922 - 18870985
Alignment:
Q  194 ggcaaattctatggtatatctaa-aaatttgagtgtattggtacaccaaatcaaaaaattaata 256  Q
    |||||||||||||||| ||| || ||||||| |||||| |||||||||| ||| ||||||||||    
T  18870922 ggcaaattctatggtacatccaataaatttgggtgtatcggtacaccaagtcataaaattaata 18870985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 245
Target Start/End: Original strand, 21181139 - 21181190
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatca 245  Q
    |||||||||||||||| |   |||||||||||||||| ||||||||||||||    
T  21181139 ggcaaattctatggtacactcaaaaatttgagtgtatcggtacaccaaatca 21181190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 1339374 - 1339436
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaata 256  Q
    |||||||||||||||| |  ||||||||||||||||  | ||||||||||||  |||||||||    
T  1339374 ggcaaattctatggtacacttaaaaatttgagtgtaccgatacaccaaatcatcaaattaata 1339436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 243
Target Start/End: Complemental strand, 11273824 - 11273774
Alignment:
Q  193 gggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaat 243  Q
    ||||||||||||||||| |||||| | ||||||||||| ||||||| ||||    
T  11273824 gggcaaattctatggtacatctaacattttgagtgtatcggtacactaaat 11273774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 263
Target Start/End: Complemental strand, 3954313 - 3954244
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaat 263  Q
    |||||||||||||||| |||||| | ||||||||||   |||||||||| ||  ||||||||| ||||||    
T  3954313 ggcaaattctatggtacatctaacattttgagtgtaccagtacaccaaagcattaaattaataattaaat 3954244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 196 - 245
Target Start/End: Complemental strand, 24159876 - 24159827
Alignment:
Q  196 caaattctatggtatatctaaaaatttgagtgtattggtacaccaaatca 245  Q
    |||||||||||||| |   ||||||||||||||| |||||||||||||||    
T  24159876 caaattctatggtacactaaaaaatttgagtgtactggtacaccaaatca 24159827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 2e-24; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 6513670 - 6513593
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||||| | ||||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  6513670 ggcaaattctatggtacacctaaagatttgagtgtattggtacactaaatcaataaattaatagttaaatgtgttatt 6513593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 194 - 271
Target Start/End: Original strand, 11598114 - 11598192
Alignment:
Q  194 ggcaaattctatggtata-tctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||||| | || ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  11598114 ggcaaattctatggtacactcaaaaaatttgagtgtattggtacacccaatcaacaaattaatagttaaatgtgttatt 11598192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 194 - 271
Target Start/End: Original strand, 5091997 - 5092074
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||||||   ||||||||||||||||| ||||||    
T  5091997 ggcaaattctatggtacatctaacaatttgagtgtattggtacaccaaatccttaaattaatagttaaatgagttatt 5092074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 34438592 - 34438515
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||| ||||||| ||| || |||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  34438592 ggcaaattttatggtacatccaataatttgagtgtattggaacaccaaatcaataaattaatagttaaatgtgttatt 34438515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 196 - 271
Target Start/End: Original strand, 34665573 - 34665648
Alignment:
Q  196 caaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||||| | || |||||||||||||||||||||||||||   ||||||||||||||||| ||||||    
T  34665573 caaattctatggtatacccaacaatttgagtgtattggtacaccaaatccttaaattaatagttaaatgagttatt 34665648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 197 - 271
Target Start/End: Complemental strand, 11813600 - 11813526
Alignment:
Q  197 aaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||||||||||| | | || |||||||||||||||||||||||||||   ||||||||||||||||||||||||    
T  11813600 aaattctatggtacacccaacaatttgagtgtattggtacaccaaatccttaaattaatagttaaatgtgttatt 11813526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 4674008 - 4673931
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||||| ||| || ||||||||||||||||||||||||||    ||||||||||||||||| ||||||    
T  4674008 ggcaaattctatggtacatccaacaatttgagtgtattggtacaccaaattcttaaattaatagttaaatgagttatt 4673931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 194 - 263
Target Start/End: Original strand, 11227627 - 11227696
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaat 263  Q
    |||||||||||||||| ||| || |||||||||||||||||||||||||||   ||||||||||||||||    
T  11227627 ggcaaattctatggtacatccaataatttgagtgtattggtacaccaaatccttaaattaatagttaaat 11227696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 194 - 271
Target Start/End: Original strand, 12547364 - 12547441
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||||| | | ||| || ||||||||||| ||||||||||||  ||||||||||||||||||||||||    
T  12547364 ggcaaattctatggtacacccaaagatatgagtgtattgatacaccaaatcattaaattaatagttaaatgtgttatt 12547441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 20212559 - 20212483
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||||| |   |||||||| |||||||||||||||| |||||| ||||||||||||||||||||||||    
T  20212559 ggcaaattctatggtacactcaaaaatttaagtgtattggtacacc-aatcaacaaattaatagttaaatgtgttatt 20212483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 194 - 271
Target Start/End: Original strand, 37909379 - 37909456
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||| ||| |   ||||||||||||||||| ||||||| |||||| ||||||||||||||||||||||||    
T  37909379 ggcaaattctatagtacactcaaaaatttgagtgtattagtacacccaatcaacaaattaatagttaaatgtgttatt 37909456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 204 - 271
Target Start/End: Original strand, 5420237 - 5420304
Alignment:
Q  204 atggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||| | ||||| |||||||||||||||||||||||||||  ||||||||||||||||||| ||||    
T  5420237 atggtacacctaaagatttgagtgtattggtacaccaaatcattaaattaatagttaaatgtgctatt 5420304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 196 - 271
Target Start/End: Original strand, 6884161 - 6884236
Alignment:
Q  196 caaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||| | | || |||||||||||||||||||||||||||   ||||||||||||||||| ||||||    
T  6884161 caaattctatggtacacccaacaatttgagtgtattggtacaccaaatccttaaattaatagttaaatgagttatt 6884236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 194 - 261
Target Start/End: Original strand, 32499150 - 32499217
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaa 261  Q
    |||||||||||||||| | | || ||||||||||||||| ||||||||||||| ||||||||||||||    
T  32499150 ggcaaattctatggtacaccaaagaatttgagtgtattgatacaccaaatcaataaattaatagttaa 32499217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 196 - 271
Target Start/End: Original strand, 36489360 - 36489435
Alignment:
Q  196 caaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||| ||| | | ||| |||||||||||||||||||| ||||||| |||||||||||||||||| |||||    
T  36489360 caaattctattgtacacccaaagatttgagtgtattggtacactaaatcaataaattaatagttaaatgtattatt 36489435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 223 - 271
Target Start/End: Original strand, 40370494 - 40370542
Alignment:
Q  223 gagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  40370494 gagtgtattggtaaaccaaatcaataaattaatagttaaatgtgttatt 40370542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 196 - 271
Target Start/End: Complemental strand, 5389605 - 5389530
Alignment:
Q  196 caaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||| ||| |  ||||||||||||||||||||||||||    ||||||||||||||||| ||||||    
T  5389605 caaattctatggtacatccaccaatttgagtgtattggtacaccaaatacttaaattaatagttaaatgagttatt 5389530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 224 - 271
Target Start/End: Complemental strand, 6438551 - 6438504
Alignment:
Q  224 agtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||    
T  6438551 agtgtattggtacaccaaatcattaaattaatagttaaatgtgttatt 6438504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 220 - 271
Target Start/End: Complemental strand, 19636478 - 19636427
Alignment:
Q  220 tttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||||||||||||||||||| ||||| |||||||||||||||| |||||||    
T  19636478 tttgagtgtattggtacaccagatcaataaattaatagttaaatatgttatt 19636427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 220 - 271
Target Start/End: Complemental strand, 19835071 - 19835020
Alignment:
Q  220 tttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||||||||||||||||||| ||||| |||||||||||||||| |||||||    
T  19835071 tttgagtgtattggtacaccagatcaataaattaatagttaaatatgttatt 19835020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 194 - 264
Target Start/End: Complemental strand, 3383593 - 3383523
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatg 264  Q
    |||||||| ||||||| ||| ||  ||||||||||||||||||||||||||   |||||||||||||||||    
T  3383593 ggcaaattttatggtacatccaaccatttgagtgtattggtacaccaaatccttaaattaatagttaaatg 3383523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 194 - 271
Target Start/End: Original strand, 7467120 - 7467204
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattgg-------tacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||||| | | |||||||||||||||||||       ||||||||||||| |||||||||||||||| |||||||    
T  7467120 ggcaaattctatggtacacccaaaaatttgagtgtattggtatttggtacaccaaatcaataaattaatagttaaatctgttatt 7467204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 196 - 271
Target Start/End: Complemental strand, 33423420 - 33423343
Alignment:
Q  196 caaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaat--taatagttaaatgtgttatt 271  Q
    |||||||||||||| |||||| ||||||| |||||||||||||||||||   ||||  ||||||||||||| ||||||    
T  33423420 caaattctatggtacatctaacaatttgaatgtattggtacaccaaatccttaaattataatagttaaatgagttatt 33423343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 271
Target Start/End: Original strand, 58920 - 58997
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||| ||||||||| | | || |||||||||||||||||||| ||||||   ||||||||||||||||| ||||||    
T  58920 ggcaaaatctatggtacacccaataatttgagtgtattggtacatcaaatccttaaattaatagttaaatgagttatt 58997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 14533228 - 14533151
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||||| | | || ||||| | |||||||||||||||||||   ||||||||||||||||| ||||||    
T  14533228 ggcaaattctatggtacacccaacaatttaaatgtattggtacaccaaatccttaaattaatagttaaatgagttatt 14533151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 38963470 - 38963393
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||| ||||||| ||| || ||||||| |||||||||||| ||||||   ||||||||||||||||| ||||||    
T  38963470 ggcaaattgtatggtacatccaacaatttgaatgtattggtacatcaaatccttaaattaatagttaaatgggttatt 38963393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 263
Target Start/End: Complemental strand, 42427977 - 42427908
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaat 263  Q
    ||||| |||||||||| | | || ||||| |||||||||||||||||||||   ||||||||||||||||    
T  42427977 ggcaagttctatggtacacccaacaatttaagtgtattggtacaccaaatccttaaattaatagttaaat 42427908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 263
Target Start/End: Complemental strand, 8371970 - 8371903
Alignment:
Q  196 caaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaat 263  Q
    |||||||||||||| ||| || ||||| ||||||||| ||||||||||    ||||||||||||||||    
T  8371970 caaattctatggtacatccaataatttaagtgtattgatacaccaaatttttaaattaatagttaaat 8371903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 244
Target Start/End: Complemental strand, 15206143 - 15206092
Alignment:
Q  194 ggcaaattctatggtatatctaaaaa-tttgagtgtattggtacaccaaatc 244  Q
    ||||||||||||| || ||||||||| |||||||||| ||||||||||||||    
T  15206143 ggcaaattctatgatacatctaaaaaatttgagtgtactggtacaccaaatc 15206092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 197 - 264
Target Start/End: Original strand, 37989034 - 37989101
Alignment:
Q  197 aaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatg 264  Q
    |||||||||||||  ||||||||||||| ||||  ||||||||||||||  ||||||| | |||||||    
T  37989034 aaattctatggtacgtctaaaaatttgaatgtaccggtacaccaaatcattaaattaacaattaaatg 37989101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 39879326 - 39879263
Alignment:
Q  194 ggcaaattctatggtatatctaa-aaatttgagtgtattggtacaccaaatcaaaaaattaata 256  Q
    |||||||||||||||| ||||||  |||||| |||||| |||||||||| ||| ||||||||||    
T  39879326 ggcaaattctatggtacatctaatgaatttgggtgtatcggtacaccaagtcataaaattaata 39879263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 244
Target Start/End: Original strand, 1353507 - 1353557
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatc 244  Q
    |||||||||||||||| | | || ||| |||||||||||||||||||||||    
T  1353507 ggcaaattctatggtacacccaataatatgagtgtattggtacaccaaatc 1353557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 271
Target Start/End: Original strand, 37083211 - 37083285
Alignment:
Q  197 aaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||| ||||||| ||| || ||||| |||||||||||||||| |||    ||||||||||||||||| ||||||    
T  37083211 aaattatatggtacatccaacaatttaagtgtattggtacaccgaatttttaaattaatagttaaatgagttatt 37083285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 197 - 262
Target Start/End: Original strand, 12071158 - 12071223
Alignment:
Q  197 aaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaa 262  Q
    ||||||||||||||| | || ||||||||||||||||||||  |||| |  ||||||||| |||||    
T  12071158 aaattctatggtatacccaacaatttgagtgtattggtacatgaaattattaaattaataattaaa 12071223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 244
Target Start/End: Original strand, 42046076 - 42046125
Alignment:
Q  195 gcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatc 244  Q
    ||||||||||||||| |   || |||||||||||||||||||||||||||    
T  42046076 gcaaattctatggtacactcaacaatttgagtgtattggtacaccaaatc 42046125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 245
Target Start/End: Complemental strand, 15362876 - 15362824
Alignment:
Q  193 gggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatca 245  Q
    ||||||||||||||||| |   |||||||||||||||  ||||||||||||||    
T  15362876 gggcaaattctatggtacactcaaaaatttgagtgtaccggtacaccaaatca 15362824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 264
Target Start/End: Complemental strand, 37782257 - 37782185
Alignment:
Q  192 agggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatg 264  Q
    ||||||||||||||| || ||| ||||||||||||||   ||||||||||| |   ||||||||| |||||||    
T  37782257 agggcaaattctatgttacatccaaaaatttgagtgtgccggtacaccaaaacgttaaattaataattaaatg 37782185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 245
Target Start/End: Complemental strand, 41555832 - 41555780
Alignment:
Q  193 gggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatca 245  Q
    ||||||||||||||||| |   |||||||| ||||||| ||||||||||||||    
T  41555832 gggcaaattctatggtacactcaaaaatttaagtgtatcggtacaccaaatca 41555780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 4e-22; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 633054 - 632977
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||||| |   ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  633054 ggcaaattctatggtacactcaaaaatttgagtgtattggtacacccaatcaacaaattaatagttaaatgtgttatt 632977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 194 - 271
Target Start/End: Original strand, 9166873 - 9166950
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||| ||| ||| | | |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  9166873 ggcaaattatatagtacacccaaaaatttgagtgtattggtacaccaaatcaataaattaatagttaaatgtgttatt 9166950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 48616853 - 48616776
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||||| |   ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  48616853 ggcaaattctatggtacactcaaaaatttgagtgtattggtacacccaatcaataaattaatagttaaatgtgttatt 48616776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 196 - 271
Target Start/End: Original strand, 2247069 - 2247144
Alignment:
Q  196 caaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||| | ||||| |||||||||||||||||||||||||||  ||||||||||||||||||| ||||    
T  2247069 caaattctatggtacacctaaagatttgagtgtattggtacaccaaatcattaaattaatagttaaatgtgctatt 2247144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 196 - 271
Target Start/End: Original strand, 2620648 - 2620723
Alignment:
Q  196 caaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||| |||||||||||||  | ||||||||||| ||||||| ||||||||||||||||||||||||    
T  2620648 caaattctatggtacatctaaaaatttggatatattggtacactaaatcaataaattaatagttaaatgtgttatt 2620723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 194 - 265
Target Start/End: Original strand, 7121957 - 7122028
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgt 265  Q
    |||||||||||||||||| ||||| ||||||||||||||||||| |||||||  ||||||||||||||||||    
T  7121957 ggcaaattctatggtatacctaaagatttgagtgtattggtacaacaaatcattaaattaatagttaaatgt 7122028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 197 - 271
Target Start/End: Original strand, 33906322 - 33906396
Alignment:
Q  197 aaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||| ||||||| |||||||||||||||| |||||||||||  |||||| ||||||||||||||||||||||||    
T  33906322 aaattatatggtacatctaaaaatttgagtatattggtacactcaatcaacaaattaatagttaaatgtgttatt 33906396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 33099061 - 33098984
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||| ||||||| ||  || ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  33099061 ggcaaattatatggtacattcaacaatttgagtgtattggtacacaaaatcaataaattaatagttaaatgtgttatt 33098984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 196 - 271
Target Start/End: Complemental strand, 26011346 - 26011271
Alignment:
Q  196 caaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||| ||||||| | | |||||||||||||||||| |||||| |||||| ||||||||||||||||||||||||    
T  26011346 caaattttatggtacacccaaaaatttgagtgtattgatacacccaatcaacaaattaatagttaaatgtgttatt 26011271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 193 - 271
Target Start/End: Complemental strand, 922249 - 922171
Alignment:
Q  193 gggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||||||||||||||| | | || |||||||||||||||||||||||||||   ||||||||||||||||| ||||||    
T  922249 gggcaaattctatggtacacccaacaatttgagtgtattggtacaccaaatccttaaattaatagttaaatgagttatt 922171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 193 - 271
Target Start/End: Original strand, 27295057 - 27295135
Alignment:
Q  193 gggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||||||||||||||| | | || |||||||||||||||||||||||||||   ||||||||||||||||| ||||||    
T  27295057 gggcaaattctatggtacacccaacaatttgagtgtattggtacaccaaatctttaaattaatagttaaatgagttatt 27295135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 193 - 271
Target Start/End: Complemental strand, 42317232 - 42317154
Alignment:
Q  193 gggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||||||| ||||||| |   |||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  42317232 gggcaaattatatggtacactcaaaattttgagtgtattggtacatcaaatcaataaattaatagttaaatgtgttatt 42317154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 31931104 - 31931027
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||||| ||| || |||||||||||||||||||| ||||||   ||||||||||||||||| ||||||    
T  31931104 ggcaaattctatggtacatccaacaatttgagtgtattggtacatcaaatccttaaattaatagttaaatgagttatt 31931027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 215 - 271
Target Start/End: Complemental strand, 28791753 - 28791697
Alignment:
Q  215 aaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||    
T  28791753 aaaaatttgggtgtattggtacaccaagtcaacaaattaatagttaaatgtgttatt 28791697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 195 - 271
Target Start/End: Complemental strand, 44246403 - 44246327
Alignment:
Q  195 gcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||||||||||||||||| |||| || || |||||||||||||||||||   ||||||||||||||||| ||||||    
T  44246403 gcaaattctatggtatatccaaaagttcgaatgtattggtacaccaaatccttaaattaatagttaaatgagttatt 44246327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 196 - 271
Target Start/End: Original strand, 51184044 - 51184119
Alignment:
Q  196 caaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||| | | ||| ||||||||||||||||||| |||||||  |||||||||||||||||| |||||    
T  51184044 caaattctatggtacacccaaagatttgagtgtattggtacaacaaatcattaaattaatagttaaatgttttatt 51184119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 197 - 271
Target Start/End: Original strand, 35910165 - 35910239
Alignment:
Q  197 aaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||||||||||| ||  |||  |||| ||||||||||||||||| |||| ||||||||||||||||||||||||    
T  35910165 aaattctatggtacattaaaatttttgggtgtattggtacaccaagtcaataaattaatagttaaatgtgttatt 35910239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 197 - 271
Target Start/End: Complemental strand, 51781507 - 51781433
Alignment:
Q  197 aaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||||||||||| | | || |||||||||||||||||||||||||||   ||||||||||||||||| ||||||    
T  51781507 aaattctatggtacacccaataatttgagtgtattggtacaccaaatccttaaattaatagttaaatgagttatt 51781433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 8461932 - 8461855
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||| |||||||||| ||| ||  ||||||||||||||||||||||||||   ||||||||||||||||| ||||||    
T  8461932 ggcaacttctatggtacatccaaccatttgagtgtattggtacaccaaatccttaaattaatagttaaatgagttatt 8461855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 194 - 271
Target Start/End: Original strand, 16482576 - 16482653
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||||| | | || ||||| |||||||||||||||||||||   ||||||||||||||||| ||||||    
T  16482576 ggcaaattctatggtacacccaataatttaagtgtattggtacaccaaatccttaaattaatagttaaatgagttatt 16482653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 194 - 263
Target Start/End: Original strand, 37498744 - 37498813
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaat 263  Q
    |||||||||||||||| ||| || ||||||||||||||||||||||||||    ||||||||||||||||    
T  37498744 ggcaaattctatggtacatccaacaatttgagtgtattggtacaccaaattcttaaattaatagttaaat 37498813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 39190963 - 39190886
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||| |||||||||| ||| || ||||||||||||||||||||||||||    ||||||||||||||||| ||||||    
T  39190963 ggcaagttctatggtacatccaacaatttgagtgtattggtacaccaaattcttaaattaatagttaaatgagttatt 39190886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 194 - 271
Target Start/End: Original strand, 45423609 - 45423686
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||| |||||||||| ||| || ||||| |||||||||||||||||||||   ||||||||||||||||| ||||||    
T  45423609 ggcaagttctatggtacatccaacaatttaagtgtattggtacaccaaatccttaaattaatagttaaatgagttatt 45423686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 46771138 - 46771061
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||| |||||||||| | |||| |||||||||||||||||| ||||||||   ||||||||||||||||| ||||||    
T  46771138 ggcaagttctatggtacacctaacaatttgagtgtattggtataccaaatccttaaattaatagttaaatgagttatt 46771061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 50239640 - 50239563
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||||  ||  ||| || ||||||||||||||||| ||||||  ||||||||||||||||||||||||    
T  50239640 ggcaaattctatggtgcattcaaatatatgagtgtattggtacactaaatcattaaattaatagttaaatgtgttatt 50239563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 221 - 270
Target Start/End: Original strand, 52260840 - 52260889
Alignment:
Q  221 ttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttat 270  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  52260840 ttgaatgtattggtacaccaaatcaataaattaatagttaaatgtgttat 52260889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 196 - 271
Target Start/End: Complemental strand, 11779040 - 11778965
Alignment:
Q  196 caaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||| ||||||| | | ||| ||||||||||||||||||| |||||||  |||||||||||||||||| |||||    
T  11779040 caaattatatggtacacccaaagatttgagtgtattggtacaacaaatcattaaattaatagttaaatgttttatt 11778965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 189 - 271
Target Start/End: Original strand, 28493805 - 28493887
Alignment:
Q  189 ataagggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||| |||||||||||||||| | | || ||||| ||||||||| |||||||||||   ||||||||||||||||| ||||||    
T  28493805 ataaaggcaaattctatggtacacccaataatttaagtgtattgttacaccaaatccttaaattaatagttaaatgagttatt 28493887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 193 - 271
Target Start/End: Original strand, 50905580 - 50905658
Alignment:
Q  193 gggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||| |||||||||| | | || |||||||||||||||||||||| ||||   ||||||||||||||||| ||||||    
T  50905580 gggcaagttctatggtacacccaacaatttgagtgtattggtacaccgaatccttaaattaatagttaaatgagttatt 50905658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 271
Target Start/End: Original strand, 23304407 - 23304484
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||| ||||||||| | | ||| ||  |||||||||||||||| ||||||  ||||||||||||||||||||||||    
T  23304407 ggcaaaatctatggtacacccaaagatacgagtgtattggtacacaaaatcattaaattaatagttaaatgtgttatt 23304484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 263
Target Start/End: Original strand, 35305151 - 35305220
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaat 263  Q
    |||||||||||||||| | | || ||||||||||||||||||||||||||    ||||||||||||||||    
T  35305151 ggcaaattctatggtacacccaacaatttgagtgtattggtacaccaaattcttaaattaatagttaaat 35305220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 197 - 269
Target Start/End: Original strand, 27352850 - 27352922
Alignment:
Q  197 aaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgtta 269  Q
    ||||||||||||| ||| ||| |||||||||||||| ||||| |||| |   |||||||||||||||||||||    
T  27352850 aaattctatggtacatccaaagatttgagtgtattgatacacaaaattattgaattaatagttaaatgtgtta 27352922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 215 - 271
Target Start/End: Complemental strand, 36275102 - 36275046
Alignment:
Q  215 aaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||||||  || |||||||||| |||||| |||||||||||||||||    
T  36275102 aaaaatttgagtgtattaatataccaaatcaataaattagtagttaaatgtgttatt 36275046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 25493498 - 25493561
Alignment:
Q  194 ggcaaattctatggtatatctaa-aaatttgagtgtattggtacaccaaatcaaaaaattaata 256  Q
    |||||||||||||||| ||| || ||||||| ||||||||||||||||||||  ||||||||||    
T  25493498 ggcaaattctatggtacatccaataaatttgggtgtattggtacaccaaatcgtaaaattaata 25493561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 200 - 271
Target Start/End: Original strand, 51519788 - 51519859
Alignment:
Q  200 ttctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||| | | || ||||||||||||||||||||||||||    ||||||||||||||||| ||||||    
T  51519788 ttctatggtacacccaacaatttgagtgtattggtacaccaaattcttaaattaatagttaaatgagttatt 51519859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 271
Target Start/End: Original strand, 51984936 - 51985011
Alignment:
Q  196 caaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||| |   || |||||||||||||||||||| ||||||   ||||||||||||||||| ||||||    
T  51984936 caaattctatggtacactcaataatttgagtgtattggtacatcaaatccttaaattaatagttaaatgagttatt 51985011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 264
Target Start/End: Original strand, 41073270 - 41073340
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatg 264  Q
    |||||||||||||||| | | ||  |||||||||||||||||||| |||||   |||||||||||||||||    
T  41073270 ggcaaattctatggtacacccaaccatttgagtgtattggtacacaaaatccttaaattaatagttaaatg 41073340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 271
Target Start/End: Original strand, 18641912 - 18641965
Alignment:
Q  218 aatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||||||||||||||||||| |||||   ||||||||||||||||| ||||||    
T  18641912 aatttgagtgtattggtacactaaatccttaaattaatagttaaatgagttatt 18641965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 271
Target Start/End: Original strand, 34256453 - 34256530
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||||| | | || ||||||||||||| |||||||||||| |  ||||||||| ||||| | ||||||    
T  34256453 ggcaaattctatggtacacccaacaatttgagtgtatcggtacaccaaattattaaattaataattaaacgagttatt 34256530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 38262540 - 38262463
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||| |||||||||| |  ||| ||||||||||||||||||||||||||    |||||||| |||||||| ||||||    
T  38262540 ggcaagttctatggtacacttaacaatttgagtgtattggtacaccaaattcttaaattaattgttaaatgagttatt 38262463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 39971675 - 39971598
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||| ||||||||||  || || |||||||||||||||||| |||||||    ||||||||||||||||| ||||||    
T  39971675 ggcaagttctatggtacgtccaataatttgagtgtattggtataccaaattcttaaattaatagttaaatgagttatt 39971598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 271
Target Start/End: Original strand, 52303013 - 52303090
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||||||||||| || | | || |||||||||||||||||||| |||||    ||||||||||||||||| ||||||    
T  52303013 ggcaaattctatgatacacccaataatttgagtgtattggtacatcaaattcttaaattaatagttaaatgagttatt 52303090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Complemental strand, 51978225 - 51978185
Alignment:
Q  231 tggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||||| |||||||| |||||||||||||||    
T  51978225 tggtacaccaaatcaataaattaattgttaaatgtgttatt 51978185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 24248209 - 24248146
Alignment:
Q  194 ggcaaattctatggtatatctaa-aaatttgagtgtattggtacaccaaatcaaaaaattaata 256  Q
    |||||||||||||||| |||||| ||||||| |||||| |||||||||| ||  ||||||||||    
T  24248209 ggcaaattctatggtacatctaataaatttgggtgtatcggtacaccaagtcgtaaaattaata 24248146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 33829272 - 33829209
Alignment:
Q  194 ggcaaattctatggtatatctaa-aaatttgagtgtattggtacaccaaatcaaaaaattaata 256  Q
    |||||||||||||||| ||| || ||||||| ||||||||||||||||| ||  ||||||||||    
T  33829272 ggcaaattctatggtacatccaataaatttgggtgtattggtacaccaagtcgtaaaattaata 33829209  T

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Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 33838694 - 33838757
Alignment:
Q  194 ggcaaattctatggtatatctaa-aaatttgagtgtattggtacaccaaatcaaaaaattaata 256  Q
    |||||||||||||||| ||| || ||||||| ||||||||||||||||| ||  ||||||||||    
T  33838694 ggcaaattctatggtacatccaataaatttgggtgtattggtacaccaagtcgtaaaattaata 33838757  T

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Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 245
Target Start/End: Original strand, 45650007 - 45650058
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatca 245  Q
    |||||||||||||||| ||  |||||||||||||||  ||||||||||||||    
T  45650007 ggcaaattctatggtacattaaaaaatttgagtgtaccggtacaccaaatca 45650058  T

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Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 271
Target Start/End: Original strand, 23056768 - 23056842
Alignment:
Q  197 aaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||| ||||||| ||| || ||||| |||||||||||||||| |||    ||||||||||||||||| ||||||    
T  23056768 aaattatatggtacatccaataatttaagtgtattggtacaccgaatttttaaattaatagttaaatgagttatt 23056842  T

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Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 271
Target Start/End: Complemental strand, 26102876 - 26102802
Alignment:
Q  197 aaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||||||||||| |   || ||||| ||||||||| |||||||||||   ||||||||||||||||| ||||||    
T  26102876 aaattctatggtacactcaataatttaagtgtattgatacaccaaatccttaaattaatagttaaatgagttatt 26102802  T

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Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 5956933 - 5956856
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||| ||||||| | | || ||||| |||||||||||||||| |||    ||||||||||||||||| ||||||    
T  5956933 ggcaaattatatggtacacccaacaatttaagtgtattggtacaccgaatttttaaattaatagttaaatgagttatt 5956856  T

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Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 188 - 256
Target Start/End: Complemental strand, 43225058 - 43224989
Alignment:
Q  188 aataagggcaaattctatggtatatctaa-aaatttgagtgtattggtacaccaaatcaaaaaattaata 256  Q
    ||||| |||||||||||||||| | | || ||||||| |||||| |||||||||| ||| ||||||||||    
T  43225058 aataatggcaaattctatggtacacccaataaatttgggtgtatcggtacaccaagtcataaaattaata 43224989  T

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Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 262
Target Start/End: Original strand, 44978869 - 44978937
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaa 262  Q
    |||||||||||||||| | | || ||||||||||||  |||||||||||| |  ||||||||| |||||    
T  44978869 ggcaaattctatggtacacccaacaatttgagtgtaccggtacaccaaattattaaattaataattaaa 44978937  T

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Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 271
Target Start/End: Complemental strand, 47719357 - 47719302
Alignment:
Q  215 aaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||| |||||||||||||| |||||||  |||||||||| | |||||||||||    
T  47719357 aaaaatttaagtgtattggtacatcaaatcattaaattaataggt-aatgtgttatt 47719302  T

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Target: scaffold0113 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 215 - 271
Target Start/End: Original strand, 29266 - 29322
Alignment:
Q  215 aaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  29266 aaaaatttgagtgtattggtacacccaatcaacaaattaatagttaaatgtgttatt 29322  T

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Target: scaffold0604 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0604
Description:

Target: scaffold0604; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 196 - 271
Target Start/End: Original strand, 2022 - 2097
Alignment:
Q  196 caaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||| |   ||||||||||||||||||||||||| |||||| |||||||||||||||||| |||||    
T  2022 caaattctatggtacactcaaaaatttgagtgtattggtacacccaatcaacaaattaatagttaaatgtcttatt 2097  T

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Target: scaffold0005 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 37015 - 36938
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatgtgttatt 271  Q
    |||||||||||||||| |   || ||||||||||||||| |||||||||||   ||||||||||||||||| ||||||    
T  37015 ggcaaattctatggtacactcaacaatttgagtgtattgatacaccaaatccttaaattaatagttaaatgagttatt 36938  T

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Target: scaffold0077 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 264
Target Start/End: Original strand, 48034 - 48080
Alignment:
Q  218 aatttgagtgtattggtacaccaaatcaaaaaattaatagttaaatg 264  Q
    |||||||||||||||||||||||||||   |||||||||||||||||    
T  48034 aatttgagtgtattggtacaccaaatccttaaattaatagttaaatg 48080  T

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Target: scaffold1844 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold1844
Description:

Target: scaffold1844; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 245
Target Start/End: Original strand, 1116 - 1167
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatca 245  Q
    |||||||||||||||| |  ||||||||||||||||  ||||||||||||||    
T  1116 ggcaaattctatggtacacttaaaaatttgagtgtaccggtacaccaaatca 1167  T

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Target: scaffold0072 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 244
Target Start/End: Complemental strand, 47981 - 47931
Alignment:
Q  194 ggcaaattctatggtatatctaaaaatttgagtgtattggtacaccaaatc 244  Q
    |||||||||||||||| |  ||||||||||||||||  |||||||||||||    
T  47981 ggcaaattctatggtacacttaaaaatttgagtgtaccggtacaccaaatc 47931  T

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Target: scaffold0060 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 261
Target Start/End: Original strand, 45761 - 45829
Alignment:
Q  194 ggcaaattctatggtatatctaaaa-atttgagtgtattggtacaccaaatcaaaaaattaatagttaa 261  Q
    |||||||||||||||| ||| |||| |||||||||||| | |||| ||||||   ||||||||||||||    
T  45761 ggcaaattctatggtacatccaaaatatttgagtgtatcgatacatcaaatctttaaattaatagttaa 45829  T

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