View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21094_low_6 (Length: 250)

Name: NF21094_low_6
Description: NF21094
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21094_low_6
NF21094_low_6
[»] chr4 (74 HSPs)
chr4 (68-242)||(46193774-46193948)
chr4 (65-242)||(25937669-25937846)
chr4 (63-242)||(33109681-33109860)
chr4 (61-242)||(15523603-15523784)
chr4 (66-242)||(11153516-11153692)
chr4 (65-236)||(25447611-25447782)
chr4 (68-242)||(23494445-23494619)
chr4 (65-242)||(12234328-12234505)
chr4 (64-242)||(22170306-22170483)
chr4 (65-242)||(51020796-51020973)
chr4 (68-235)||(38962195-38962362)
chr4 (68-242)||(4219559-4219733)
chr4 (69-242)||(22434547-22434718)
chr4 (65-242)||(48526195-48526371)
chr4 (66-228)||(46193405-46193568)
chr4 (64-242)||(2118665-2118842)
chr4 (69-242)||(54995437-54995609)
chr4 (60-242)||(45082426-45082606)
chr4 (65-225)||(15523234-15523395)
chr4 (66-226)||(22434179-22434340)
chr4 (66-226)||(25447247-25447408)
chr4 (65-180)||(23494874-23494989)
chr4 (57-226)||(45082808-45082978)
chr4 (69-226)||(54995072-54995230)
chr4 (64-180)||(25938102-25938218)
chr4 (64-226)||(11153144-11153307)
chr4 (65-180)||(33109895-33110010)
chr4 (57-226)||(12234713-12234883)
chr4 (65-226)||(20470895-20471057)
chr4 (64-226)||(48526565-48526728)
chr4 (69-226)||(4219943-4220101)
chr4 (65-226)||(51021180-51021341)
chr4 (65-206)||(48293593-48293734)
chr4 (68-180)||(2118295-2118407)
chr4 (134-242)||(12503805-12503913)
chr4 (64-179)||(18751597-18751712)
chr4 (67-206)||(20958266-20958403)
chr4 (68-181)||(18763950-18764063)
chr4 (67-206)||(44892553-44892692)
chr4 (69-206)||(48713751-48713888)
chr4 (84-206)||(43243686-43243807)
chr4 (61-192)||(10258306-10258437)
chr4 (64-202)||(16690934-16691072)
chr4 (66-206)||(48294947-48295088)
chr4 (65-202)||(48708294-48708431)
chr4 (66-177)||(35363034-35363146)
chr4 (84-204)||(43281198-43281317)
chr4 (57-206)||(44890508-44890657)
chr4 (83-226)||(12503453-12503597)
chr4 (73-204)||(20957196-20957327)
chr4 (64-136)||(16318251-16318323)
chr4 (66-202)||(16691481-16691616)
chr4 (63-242)||(17503971-17504149)
chr4 (124-206)||(43242328-43242410)
chr4 (175-242)||(18751971-18752038)
chr4 (66-163)||(55189528-55189625)
chr4 (63-119)||(55677451-55677507)
chr4 (127-206)||(44220782-44220861)
chr4 (66-206)||(30597926-30598065)
chr4 (202-242)||(17504329-17504369)
chr4 (202-242)||(35193443-35193483)
chr4 (68-119)||(44219377-44219428)
chr4 (65-119)||(46737148-46737202)
chr4 (58-119)||(21034730-21034791)
chr4 (58-119)||(34789876-34789937)
chr4 (209-242)||(40160236-40160269)
chr4 (65-117)||(12593518-12593570)
chr4 (68-231)||(24336144-24336307)
chr4 (68-119)||(54440573-54440624)
chr4 (65-119)||(19528868-19528922)
chr4 (65-119)||(33689828-33689882)
chr4 (65-119)||(41608908-41608962)
chr4 (65-119)||(45838546-45838600)
chr4 (65-117)||(34807115-34807167)
[»] chr5 (51 HSPs)
chr5 (65-242)||(2865124-2865301)
chr5 (65-242)||(18183338-18183515)
chr5 (61-242)||(19359131-19359312)
chr5 (66-242)||(5819298-5819474)
chr5 (66-242)||(8647438-8647614)
chr5 (63-242)||(29455111-29455290)
chr5 (65-242)||(24362205-24362382)
chr5 (65-242)||(8460929-8461106)
chr5 (65-238)||(14215616-14215789)
chr5 (65-242)||(15708970-15709146)
chr5 (65-242)||(164560-164737)
chr5 (69-242)||(15372242-15372415)
chr5 (64-242)||(16018587-16018763)
chr5 (65-226)||(19359520-19359682)
chr5 (65-231)||(14463901-14464066)
chr5 (88-242)||(25000112-25000266)
chr5 (69-226)||(5818932-5819090)
chr5 (65-226)||(8647822-8647984)
chr5 (69-226)||(18182973-18183131)
chr5 (68-226)||(2864756-2864915)
chr5 (63-226)||(8461315-8461479)
chr5 (68-242)||(24331929-24332107)
chr5 (72-226)||(24361843-24361997)
chr5 (64-228)||(25000471-25000636)
chr5 (63-226)||(29454737-29454901)
chr5 (72-226)||(24325218-24325372)
chr5 (66-206)||(7349422-7349562)
chr5 (68-226)||(14215243-14215402)
chr5 (65-226)||(24331558-24331722)
chr5 (66-225)||(164191-164350)
chr5 (69-228)||(16018969-16019129)
chr5 (66-207)||(4623148-4623287)
chr5 (67-186)||(4222147-4222266)
chr5 (68-179)||(15371873-15371983)
chr5 (60-192)||(7348553-7348685)
chr5 (66-226)||(15709353-15709513)
chr5 (66-204)||(4219663-4219800)
chr5 (79-205)||(4624631-4624757)
chr5 (72-204)||(6019177-6019309)
chr5 (1-65)||(5501683-5501747)
chr5 (67-205)||(6018315-6018452)
chr5 (117-206)||(13814133-13814226)
chr5 (64-228)||(41834443-41834607)
chr5 (67-226)||(10721787-10721945)
chr5 (183-242)||(24325580-24325639)
chr5 (196-226)||(14340793-14340823)
chr5 (148-226)||(14462686-14462769)
chr5 (196-242)||(16752711-16752757)
chr5 (65-117)||(15029804-15029856)
chr5 (65-141)||(22651782-22651858)
chr5 (67-119)||(32697719-32697771)
[»] chr1 (47 HSPs)
chr1 (64-242)||(50970647-50970825)
chr1 (65-242)||(18984118-18984295)
chr1 (62-242)||(29869616-29869796)
chr1 (64-235)||(5540194-5540365)
chr1 (63-235)||(15646571-15646743)
chr1 (60-242)||(15173090-15173272)
chr1 (68-242)||(33144288-33144462)
chr1 (66-235)||(29306953-29307122)
chr1 (63-242)||(5962947-5963126)
chr1 (66-242)||(21856412-21856588)
chr1 (66-242)||(8678911-8679086)
chr1 (65-242)||(9018972-9019149)
chr1 (66-242)||(17433216-17433392)
chr1 (65-240)||(26859431-26859605)
chr1 (66-235)||(29307317-29307487)
chr1 (68-242)||(39154021-39154195)
chr1 (63-180)||(18984550-18984667)
chr1 (67-226)||(5539817-5539977)
chr1 (68-228)||(17433597-17433758)
chr1 (65-224)||(50970277-50970437)
chr1 (63-206)||(52268287-52268430)
chr1 (64-226)||(33143913-33144078)
chr1 (67-180)||(8678542-8678655)
chr1 (66-226)||(29870003-29870164)
chr1 (67-225)||(4636356-4636515)
chr1 (68-226)||(21856044-21856203)
chr1 (64-226)||(39154404-39154567)
chr1 (65-226)||(15173478-15173639)
chr1 (65-235)||(9019338-9019509)
chr1 (65-226)||(15646191-15646353)
chr1 (66-180)||(26859059-26859173)
chr1 (126-240)||(4636033-4636146)
chr1 (67-226)||(5962579-5962739)
chr1 (65-152)||(2733416-2733503)
chr1 (68-180)||(52269179-52269291)
chr1 (66-226)||(17112282-17112442)
chr1 (68-141)||(47826966-47827039)
chr1 (74-163)||(47827036-47827125)
chr1 (66-147)||(50419725-50419806)
chr1 (64-119)||(29438928-29438983)
chr1 (63-127)||(39843509-39843573)
chr1 (65-228)||(44802555-44802718)
chr1 (202-236)||(17088516-17088550)
chr1 (65-127)||(52233737-52233799)
chr1 (65-207)||(52235073-52235215)
chr1 (68-117)||(50304441-50304490)
chr1 (69-117)||(17641864-17641912)
[»] chr7 (40 HSPs)
chr7 (64-242)||(37786765-37786943)
chr7 (69-242)||(19830423-19830596)
chr7 (66-242)||(19590525-19590701)
chr7 (64-242)||(29100220-29100398)
chr7 (64-242)||(38858641-38858819)
chr7 (65-240)||(35289272-35289447)
chr7 (66-240)||(32004985-32005159)
chr7 (65-240)||(2659211-2659386)
chr7 (65-240)||(34534162-34534337)
chr7 (64-242)||(4641438-4641616)
chr7 (72-235)||(23953105-23953268)
chr7 (65-226)||(19590909-19591071)
chr7 (65-226)||(38859025-38859187)
chr7 (69-235)||(4478076-4478242)
chr7 (65-225)||(32004613-32004774)
chr7 (65-204)||(28583438-28583577)
chr7 (65-226)||(2658838-2659000)
chr7 (65-224)||(37787153-37787313)
chr7 (65-206)||(38160950-38161091)
chr7 (79-226)||(29099863-29100011)
chr7 (65-226)||(34533790-34533952)
chr7 (66-180)||(35288903-35289017)
chr7 (60-180)||(23952724-23952845)
chr7 (64-226)||(19830804-19830966)
chr7 (67-206)||(28584327-28584466)
chr7 (69-226)||(4641828-4641983)
chr7 (64-130)||(39137014-39137081)
chr7 (63-121)||(34595263-34595321)
chr7 (66-119)||(26048439-26048492)
chr7 (66-119)||(27245203-27245256)
chr7 (64-141)||(49064032-49064109)
chr7 (57-116)||(2758194-2758253)
chr7 (200-235)||(32427397-32427432)
chr7 (69-119)||(787279-787329)
chr7 (60-114)||(5746138-5746192)
chr7 (196-242)||(35579028-35579074)
chr7 (200-242)||(35579256-35579298)
chr7 (65-119)||(48247586-48247640)
chr7 (69-117)||(26026320-26026368)
chr7 (67-119)||(39388761-39388813)
[»] scaffold0295 (2 HSPs)
scaffold0295 (65-242)||(4792-4969)
scaffold0295 (68-180)||(5222-5334)
[»] chr6 (39 HSPs)
chr6 (65-242)||(20741099-20741276)
chr6 (66-242)||(10900299-10900475)
chr6 (66-242)||(11276951-11277127)
chr6 (65-242)||(18257136-18257313)
chr6 (64-242)||(15828010-15828188)
chr6 (65-242)||(28472636-28472812)
chr6 (65-242)||(29859825-29860001)
chr6 (65-240)||(12935528-12935703)
chr6 (67-242)||(31470685-31470860)
chr6 (65-242)||(11444986-11445163)
chr6 (66-240)||(1149802-1149977)
chr6 (65-226)||(2319671-2319832)
chr6 (67-242)||(18505288-18505463)
chr6 (69-235)||(10899942-10900109)
chr6 (65-226)||(12935156-12935318)
chr6 (69-242)||(2322588-2322760)
chr6 (64-242)||(23073997-23074164)
chr6 (65-226)||(11445371-11445533)
chr6 (65-226)||(22219737-22219899)
chr6 (65-226)||(23075512-23075674)
chr6 (66-229)||(4811372-4811535)
chr6 (69-226)||(18504922-18505080)
chr6 (64-226)||(20741485-20741651)
chr6 (66-226)||(18257521-18257682)
chr6 (63-226)||(31470312-31470476)
chr6 (68-206)||(29033436-29033575)
chr6 (64-235)||(11276588-11276760)
chr6 (62-202)||(3835135-3835275)
chr6 (68-206)||(29035042-29035180)
chr6 (65-154)||(1149464-1149553)
chr6 (65-206)||(18296144-18296284)
chr6 (67-180)||(15827639-15827754)
chr6 (66-175)||(4811692-4811801)
chr6 (66-122)||(22534214-22534270)
chr6 (64-241)||(35163557-35163735)
chr6 (64-113)||(31574224-31574273)
chr6 (65-113)||(5120968-5121016)
chr6 (67-119)||(30250722-30250774)
chr6 (202-242)||(32836367-32836407)
[»] chr3 (69 HSPs)
chr3 (69-242)||(5136983-5137156)
chr3 (66-242)||(39555946-39556122)
chr3 (65-242)||(24300925-24301102)
chr3 (65-242)||(31779021-31779198)
chr3 (64-242)||(23644460-23644638)
chr3 (69-242)||(41046703-41046876)
chr3 (65-240)||(20840559-20840734)
chr3 (64-242)||(37726927-37727105)
chr3 (62-242)||(27393946-27394126)
chr3 (65-242)||(30104481-30104657)
chr3 (66-235)||(43973441-43973610)
chr3 (65-221)||(48452988-48453144)
chr3 (66-240)||(32535330-32535508)
chr3 (68-242)||(25853596-25853770)
chr3 (65-242)||(26837725-26837901)
chr3 (70-242)||(22425182-22425354)
chr3 (57-242)||(17464860-17465046)
chr3 (69-242)||(26274936-26275108)
chr3 (65-226)||(43973824-43973986)
chr3 (66-226)||(37727314-37727475)
chr3 (63-226)||(27393658-27393822)
chr3 (60-226)||(17464485-17464652)
chr3 (64-226)||(20840945-20841108)
chr3 (64-226)||(39555576-39555739)
chr3 (69-206)||(25612382-25612519)
chr3 (66-226)||(25853234-25853395)
chr3 (64-226)||(31778651-31778814)
chr3 (65-226)||(4275748-4275910)
chr3 (65-228)||(29801798-29801962)
chr3 (64-180)||(32534957-32535073)
chr3 (66-226)||(23644849-23645010)
chr3 (62-226)||(30098147-30098312)
chr3 (66-205)||(23228414-23228552)
chr3 (65-226)||(5137365-5137527)
chr3 (69-226)||(26837363-26837521)
chr3 (65-226)||(22424813-22424975)
chr3 (61-187)||(29801351-29801477)
chr3 (66-206)||(50116814-50116954)
chr3 (67-207)||(32697105-32697244)
chr3 (64-226)||(26274565-26274728)
chr3 (65-206)||(51474738-51474880)
chr3 (65-206)||(37220556-37220697)
chr3 (67-180)||(51473429-51473542)
chr3 (64-226)||(24300555-24300717)
chr3 (65-204)||(45965937-45966076)
chr3 (64-226)||(41047083-41047244)
chr3 (68-204)||(25420548-25420684)
chr3 (65-152)||(37222030-37222117)
chr3 (67-206)||(25419145-25419284)
chr3 (85-194)||(18010162-18010271)
chr3 (63-206)||(23227259-23227396)
chr3 (65-243)||(49407795-49407972)
chr3 (69-193)||(32695706-32695830)
chr3 (65-242)||(27200062-27200238)
chr3 (196-242)||(55192247-55192293)
chr3 (182-242)||(29801532-29801592)
chr3 (64-242)||(51827955-51828133)
chr3 (67-242)||(37075687-37075864)
chr3 (65-119)||(52375824-52375878)
chr3 (60-117)||(49720856-49720913)
chr3 (65-242)||(50900898-50901074)
chr3 (69-141)||(22370599-22370671)
chr3 (64-119)||(330329-330384)
chr3 (64-115)||(14654686-14654737)
chr3 (62-97)||(25611494-25611529)
chr3 (64-119)||(41998721-41998776)
chr3 (65-119)||(49720370-49720424)
chr3 (66-119)||(40275093-40275146)
chr3 (64-117)||(46013420-46013473)
[»] chr2 (53 HSPs)
chr2 (69-240)||(11090524-11090695)
chr2 (63-242)||(40027137-40027316)
chr2 (60-242)||(239347-239528)
chr2 (65-242)||(1978107-1978284)
chr2 (61-242)||(43058328-43058509)
chr2 (65-242)||(18451200-18451377)
chr2 (65-242)||(22374319-22374496)
chr2 (69-242)||(40815714-40815887)
chr2 (63-242)||(26538094-26538273)
chr2 (66-240)||(28616613-28616788)
chr2 (69-239)||(14432145-14432315)
chr2 (65-235)||(26538454-26538625)
chr2 (72-242)||(3025472-3025641)
chr2 (69-235)||(8425736-8425902)
chr2 (64-240)||(7446340-7446519)
chr2 (64-206)||(20444747-20444889)
chr2 (64-226)||(18450828-18450991)
chr2 (65-226)||(22374709-22374871)
chr2 (64-226)||(40027524-40027687)
chr2 (65-226)||(7446730-7446892)
chr2 (67-206)||(35781068-35781207)
chr2 (68-226)||(40815347-40815506)
chr2 (67-226)||(239736-239896)
chr2 (66-206)||(35779708-35779848)
chr2 (65-180)||(1978540-1978655)
chr2 (65-206)||(20440437-20440577)
chr2 (65-180)||(11090951-11091066)
chr2 (64-226)||(28616998-28617161)
chr2 (65-226)||(43058717-43058878)
chr2 (65-180)||(28847126-28847241)
chr2 (66-225)||(3025848-3026006)
chr2 (68-206)||(8972239-8972377)
chr2 (69-225)||(8425358-8425514)
chr2 (68-206)||(15551501-15551639)
chr2 (68-226)||(14432525-14432684)
chr2 (68-207)||(15552458-15552596)
chr2 (60-242)||(28143400-28143581)
chr2 (64-208)||(3824112-3824256)
chr2 (69-140)||(3822924-3822995)
chr2 (66-117)||(4355755-4355806)
chr2 (64-119)||(42192736-42192791)
chr2 (65-119)||(25336093-25336147)
chr2 (65-119)||(38007949-38008003)
chr2 (65-119)||(43216202-43216256)
chr2 (66-119)||(6949937-6949990)
chr2 (64-224)||(31797166-31797325)
chr2 (63-119)||(32418156-32418212)
chr2 (65-119)||(20128230-20128284)
chr2 (66-119)||(42192240-42192293)
chr2 (64-117)||(44220140-44220193)
chr2 (65-141)||(62956-63032)
chr2 (63-127)||(9747518-9747582)
chr2 (67-119)||(16953427-16953479)
[»] chr8 (39 HSPs)
chr8 (65-242)||(19176659-19176836)
chr8 (65-242)||(12571862-12572040)
chr8 (65-239)||(41681133-41681306)
chr8 (64-242)||(9930026-9930204)
chr8 (65-242)||(31133219-31133396)
chr8 (64-242)||(33328156-33328334)
chr8 (65-242)||(44831614-44831791)
chr8 (65-240)||(11656454-11656630)
chr8 (70-242)||(13224645-13224816)
chr8 (66-242)||(9178005-9178180)
chr8 (57-226)||(44831238-44831408)
chr8 (64-226)||(13225023-13225186)
chr8 (65-226)||(19176289-19176451)
chr8 (69-242)||(4630161-4630328)
chr8 (64-226)||(11656841-11657004)
chr8 (69-226)||(9928912-9929070)
chr8 (66-180)||(41681565-41681679)
chr8 (67-178)||(31133653-31133764)
chr8 (65-180)||(34540979-34541094)
chr8 (65-226)||(33742921-33743082)
chr8 (112-240)||(33743290-33743418)
chr8 (69-226)||(12572235-12572393)
chr8 (68-226)||(33328524-33328683)
chr8 (65-174)||(11336959-11337068)
chr8 (65-178)||(4629796-4629909)
chr8 (69-204)||(10918129-10918264)
chr8 (64-206)||(8073957-8074098)
chr8 (145-206)||(43958264-43958325)
chr8 (63-106)||(10919691-10919734)
chr8 (65-99)||(9177666-9177700)
chr8 (65-119)||(15255852-15255906)
chr8 (67-119)||(28254919-28254971)
chr8 (65-141)||(35427283-35427359)
chr8 (63-117)||(599529-599583)
chr8 (65-119)||(6115604-6115658)
chr8 (64-242)||(28877260-28877437)
chr8 (68-114)||(43958211-43958257)
chr8 (66-119)||(9796726-9796779)
chr8 (208-241)||(18805304-18805337)
[»] scaffold0951 (2 HSPs)
scaffold0951 (65-240)||(1666-1841)
scaffold0951 (65-226)||(2051-2213)
[»] scaffold0273 (2 HSPs)
scaffold0273 (65-242)||(4576-4753)
scaffold0273 (105-226)||(4242-4364)
[»] scaffold0007 (4 HSPs)
scaffold0007 (63-242)||(64299-64478)
scaffold0007 (64-180)||(64736-64852)
scaffold0007 (63-242)||(205738-205916)
scaffold0007 (63-163)||(210786-210886)
[»] scaffold0019 (1 HSPs)
scaffold0019 (65-242)||(134042-134219)
[»] scaffold1223 (2 HSPs)
scaffold1223 (68-242)||(755-928)
scaffold1223 (66-235)||(1116-1286)
[»] scaffold0027 (2 HSPs)
scaffold0027 (65-242)||(42528-42704)
scaffold0027 (61-235)||(42164-42339)
[»] scaffold0432 (2 HSPs)
scaffold0432 (69-242)||(10242-10414)
scaffold0432 (69-173)||(9935-10039)
[»] scaffold0417 (2 HSPs)
scaffold0417 (85-242)||(10640-10797)
scaffold0417 (66-180)||(11054-11168)
[»] scaffold0176 (2 HSPs)
scaffold0176 (64-233)||(18833-19001)
scaffold0176 (66-163)||(19069-19166)
[»] scaffold0113 (1 HSPs)
scaffold0113 (64-192)||(28662-28790)
[»] scaffold0157 (2 HSPs)
scaffold0157 (134-242)||(16564-16672)
scaffold0157 (83-226)||(16880-17024)
[»] scaffold1585 (1 HSPs)
scaffold1585 (67-206)||(568-707)
[»] scaffold0057 (2 HSPs)
scaffold0057 (69-206)||(61863-62000)
scaffold0057 (65-140)||(61027-61102)
[»] scaffold1696 (1 HSPs)
scaffold1696 (70-206)||(454-588)
[»] scaffold0076 (1 HSPs)
scaffold0076 (69-169)||(8451-8551)
[»] scaffold0168 (1 HSPs)
scaffold0168 (115-206)||(7693-7784)
[»] scaffold1339 (1 HSPs)
scaffold1339 (59-91)||(30-62)
[»] scaffold0830 (1 HSPs)
scaffold0830 (59-91)||(5352-5384)


Alignment Details
Target: chr4 (Bit Score: 167; Significance: 1e-89; HSPs: 74)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 68 - 242
Target Start/End: Complemental strand, 46193948 - 46193774
Alignment:
Q  68 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattg 167  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46193948 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattg 46193849  T
Q  168 catttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  46193848 catttttcgtcctaccccccattttattctccaaaaacgtagagaattgacagttttagacctaccccctatgct 46193774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 65 - 242
Target Start/End: Original strand, 25937669 - 25937846
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  25937669 aggcttaattacatttttggtcctcgtgttttagcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 25937768  T
Q  165 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    |||||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  25937769 ttgcattttttgtcctgtcccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccatatgct 25937846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 63 - 242
Target Start/End: Original strand, 33109681 - 33109860
Alignment:
Q  63 taaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 162  Q
    |||| |||||||||| ||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  33109681 taagacttaattacatttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaattatcatttt 33109780  T
Q  163 tattgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    | |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  33109781 tgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccctctatgct 33109860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 61 - 242
Target Start/End: Complemental strand, 15523784 - 15523603
Alignment:
Q  61 tataaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 160  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||||||| ||||||| |||||||||| |||||||    
T  15523784 tataaggcttaattacacttttggtcatcgtgttttgggctactcacgaaactggtcctgcccttttaaaacaaaacaaaatggtccttcaagtatcatt 15523685  T
Q  161 tttattgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    ||| |||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  15523684 tttgttgcatttttcgtcctaccccccattttattctccaaaaacgcaaagaaatgacagttttagacctaccccctatgct 15523603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 66 - 242
Target Start/End: Complemental strand, 11153692 - 11153516
Alignment:
Q  66 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 165  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||||| |    
T  11153692 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaacgttccttcaattatcatttttgt 11153593  T
Q  166 tgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    ||||||||||||||| ||| ||||||||||||||||||||| |||||||| |||||||||||| |||||||||||||    
T  11153592 tgcatttttcgtcctaccctccattttattctccaaaaacgcagagaaataacagttttagacttaccccctatgct 11153516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 65 - 236
Target Start/End: Complemental strand, 25447782 - 25447611
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||     
T  25447782 aggcttaattacacttttggtcttcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttg 25447683  T
Q  165 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccc 236  Q
    |||||||||||||||| ||| ||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  25447682 ttgcatttttcgtcctaccctccattttattctccaaaaacgcagagaaattacagttttagacctaccccc 25447611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 68 - 242
Target Start/End: Original strand, 23494445 - 23494619
Alignment:
Q  68 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattg 167  Q
    |||||||||| ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  23494445 cttaattacatttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaagcggtccttcaattatcatttttattg 23494544  T
Q  168 catttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    ||||||||||||| ||||||||||||||||||||| ||| |||||||||||||||||||||||||| | ||||||    
T  23494545 catttttcgtcctaccccccattttattctccaaacacgcagagaaatgacagttttagacctacctcatatgct 23494619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 65 - 242
Target Start/End: Original strand, 12234328 - 12234505
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    ||||||||||||||||||||||||| ||||||||| || |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||     
T  12234328 aggcttaattacacttttggtcctcttgttttggcttattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 12234427  T
Q  165 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||||    
T  12234428 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttaaacctaccccctatgct 12234505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 64 - 242
Target Start/End: Complemental strand, 22170483 - 22170306
Alignment:
Q  64 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 163  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||| |||||||||| |||||||||||| ||||||||||||||||    
T  22170483 aaggcttaattacacttttggtcctcgtgttttgacctactgacgaaattg-tcctgcctttttaaaacaaaacaaaacggtcattcaattatcattttt 22170385  T
Q  164 attgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
     |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  22170384 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacgtaccccctatgct 22170306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 65 - 242
Target Start/End: Original strand, 51020796 - 51020973
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    ||||||||||||||||||| ||||| |||||||||  | |||| ||| ||||||||||||||||||||||||||||||| |||||||||||||||||||     
T  51020796 aggcttaattacacttttgatcctcatgttttggctaattcactaaactggtcctgcccttttaaaacagaacaaaacgatccttcaattatcatttttg 51020895  T
Q  165 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  51020896 ttgcatttttcgtcctaccccccattttattcttcaaaaacgtagagaaatgacagttttagacctaccccctatgct 51020973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 68 - 235
Target Start/End: Complemental strand, 38962362 - 38962195
Alignment:
Q  68 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattg 167  Q
    |||||||||| |||||||||||||||||||| ||| |||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| |||    
T  38962362 cttaattacatttttggtcctcgtgttttggtctattcacgaaactggtccggcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 38962263  T
Q  168 catttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 235  Q
    ||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  38962262 catttttcgtcctaccccccattttattcttcaaaaacgcagagaaatgacagttttagacctacccc 38962195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 68 - 242
Target Start/End: Original strand, 4219559 - 4219733
Alignment:
Q  68 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattg 167  Q
    |||||||||| ||||||||||||||||||||||||||||||||| |||||||||| |||||||| | |||||||| |||||||||||||||||||| |||    
T  4219559 cttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaataaaacaaaacagtccttcaattatcatttttgttg 4219658  T
Q  168 catttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||||||    
T  4219659 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttaaacctatcccctatgct 4219733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 69 - 242
Target Start/End: Complemental strand, 22434718 - 22434547
Alignment:
Q  69 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgc 168  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||| ||||||||||||||| |||||||||||||||| ||||    
T  22434718 ttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaa-cagaacaaaacggtcattcaattatcatttttgttgc 22434620  T
Q  169 atttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    |||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  22434619 atttttcgtcctaccccc-attttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 22434547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 65 - 242
Target Start/End: Original strand, 48526195 - 48526371
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    ||||||||||||||||||||| ||||||||||| |||||||| |||| |||  ||||||||||||||||||||||||||||||||||||||||||||||     
T  48526195 aggcttaattacacttttggttctcgtgttttgacctactcatgaaactggctctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 48526294  T
Q  165 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    ||||||||||||||||  |||||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||    
T  48526295 ttgcatttttcgtcct-acccccattttattctccaaaaatgcagagaaatgacagttttagatctaccccctatgct 48526371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 66 - 228
Target Start/End: Original strand, 46193405 - 46193568
Alignment:
Q  66 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 165  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |    
T  46193405 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaaaggtccttcaattatcatttttgt 46193504  T
Q  166 tgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttagac 228  Q
    ||||||||||||||| || || ||||| |  ||||| ||||| |||||||||||||||||||||    
T  46193505 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttagac 46193568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 64 - 242
Target Start/End: Complemental strand, 2118842 - 2118665
Alignment:
Q  64 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 163  Q
    |||| |||||||||||||||||| |||||||||||||| |||| |||| |||||||  |||||||||||| |||||||||||| ||||||||||||||||    
T  2118842 aaggtttaattacacttttggtcttcgtgttttggcctgctcatgaaactggtcctatccttttaaaacataacaaaacggtcattcaattatcattttt 2118743  T
Q  164 attgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
     ||||||||||||||||  |||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||    
T  2118742 gttgcatttttcgtcct-acccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 2118665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 69 - 242
Target Start/End: Complemental strand, 54995609 - 54995437
Alignment:
Q  69 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgc 168  Q
    ||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||| |||||||||||||||||||| ||||| |||| ||||    
T  54995609 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaatagaacaaaacggtccttcaagtatca-ttttgttgc 54995511  T
Q  169 atttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    ||||||||||||  |||||||||||||||| ||||||| | |||||||| ||||||||||||||| ||||||||    
T  54995510 atttttcgtcctaacccccattttattctctaaaaacgcaaagaaatgatagttttagacctaccacctatgct 54995437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 60 - 242
Target Start/End: Original strand, 45082426 - 45082606
Alignment:
Q  60 ttataaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcat 159  Q
    |||| ||| |||||||| ||||||||| ||||||||||| ||||||||||| | |||  ||||||||||||| |||||||||||||||||||||||||||    
T  45082426 ttattaggtttaattacgcttttggtcatcgtgttttggtctactcacgaact-ggttttgcccttttaaaatagaacaaaacggtccttcaattatcat 45082524  T
Q  160 ttttattgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    |||| ||||||||||||||||  |||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||||    
T  45082525 ttttgttgcatttttcgtcct-acccccattttattctccaaaaacacagagaaatgacaattttagacctaccccctatgct 45082606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 65 - 225
Target Start/End: Original strand, 15523234 - 15523395
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||     
T  15523234 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattattatttttt 15523333  T
Q  165 ttgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagtttta 225  Q
    |||||||||||||||| || || ||||| |  ||| | ||||| ||||||||||||||||||    
T  15523334 ttgcatttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagtttta 15523395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 66 - 226
Target Start/End: Original strand, 22434179 - 22434340
Alignment:
Q  66 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 165  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  22434179 ggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 22434278  T
Q  166 tgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 226  Q
    || |||||||||||| || || ||||| |  ||||| ||||| |||||||||||||||||||    
T  22434279 tgtatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 22434340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 66 - 226
Target Start/End: Original strand, 25447247 - 25447408
Alignment:
Q  66 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 165  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  25447247 ggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 25447346  T
Q  166 tgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 226  Q
    ||||||||||||||| || || ||||| |  ||||| ||||| |||||||||||| ||||||    
T  25447347 tgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacaattttag 25447408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 65 - 180
Target Start/End: Complemental strand, 23494989 - 23494874
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  23494989 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 23494890  T
Q  165 ttgcatttttcgtcct 180  Q
    ||||||||||||||||    
T  23494889 ttgcatttttcgtcct 23494874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 57 - 226
Target Start/End: Complemental strand, 45082978 - 45082808
Alignment:
Q  57 taattataaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattat 156  Q
    ||||| || |||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  45082978 taattttatggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattat 45082879  T
Q  157 catttttattgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 226  Q
    ||||||| |||||||||||||||| || || ||||| |  ||| | ||||| |||||||||||||||||||    
T  45082878 catttttgttgcatttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttag 45082808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 69 - 226
Target Start/End: Original strand, 54995072 - 54995230
Alignment:
Q  69 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgc 168  Q
    ||||||||||||||||||||||||| ||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  54995072 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 54995171  T
Q  169 atttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 226  Q
    |||||||||||| || || ||||| |  ||||| ||| |||||||||||||||||||||    
T  54995172 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 54995230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 64 - 180
Target Start/End: Complemental strand, 25938218 - 25938102
Alignment:
Q  64 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 163  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  25938218 aaggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacagtccttcaattatcattttt 25938119  T
Q  164 attgcatttttcgtcct 180  Q
     |||||||||| |||||    
T  25938118 gttgcattttttgtcct 25938102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 64 - 226
Target Start/End: Original strand, 11153144 - 11153307
Alignment:
Q  64 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 163  Q
    |||||||||||| ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||    
T  11153144 aaggcttaattatacttttggtcctcgtgttttggcctactcacaaaattggtcatgcccttttaaaatagaataaaacggtccttcaattatcattttt 11153243  T
Q  164 attgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 226  Q
     |||||||||||||||| || || ||||| |  | ||| ||||| |||||||||||||||||||    
T  11153244 gttgcatttttcgtcctacctcctattttcaaaccccagaaacgcagagaaatgacagttttag 11153307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 65 - 180
Target Start/End: Complemental strand, 33110010 - 33109895
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||     
T  33110010 aggcttaattacacttttggtcctcatgttttggcctgctcacgaaattggtcctgcccttttaaaacataacaaaacggtccttcaattatcatttttg 33109911  T
Q  165 ttgcatttttcgtcct 180  Q
    ||||||||||||||||    
T  33109910 ttgcatttttcgtcct 33109895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 57 - 226
Target Start/End: Complemental strand, 12234883 - 12234713
Alignment:
Q  57 taattataaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattat 156  Q
    |||||| | |||||||||| ||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||    
T  12234883 taattaaatggcttaattatacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaacagaacaaaacggtccttcaattat 12234784  T
Q  157 catttttattgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 226  Q
    ||||||| |||||||||||||||| || || ||||| |  | ||| ||| | |||||||||||||||||||    
T  12234783 catttttgttgcatttttcgtcctacctcctattttcaaaccccagaaatgcagagaaatgacagttttag 12234713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 65 - 226
Target Start/End: Complemental strand, 20471057 - 20470895
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| ||||| | |||||||||||||||||||||||||| ||||||||||||||||     
T  20471057 aggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcattcccttttaaaacagaacaaaacggtcattcaattatcatttttg 20470958  T
Q  165 ttgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 226  Q
    |||||||||||||||| || || ||||| |  ||||| ||||| |||||||||| ||||||||    
T  20470957 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgaaagttttag 20470895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 64 - 226
Target Start/End: Complemental strand, 48526728 - 48526565
Alignment:
Q  64 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 163  Q
    |||| ||||||| |||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  48526728 aaggtttaattatacttttggtcctcgtgttttggtctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcactttt 48526629  T
Q  164 attgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 226  Q
     |||||||||||||||| || || ||||| |  ||||| ||||  |||||||||||||||||||    
T  48526628 gttgcatttttcgtcctacctcctattttcaaactccataaacacagagaaatgacagttttag 48526565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 69 - 226
Target Start/End: Complemental strand, 4220101 - 4219943
Alignment:
Q  69 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgc 168  Q
    ||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||||||||||| |||| |||||||||||||||| ||||    
T  4220101 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgctcttttaaaacagaacaaaatggtcattcaattatcatttttgttgc 4220002  T
Q  169 atttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 226  Q
    |||||||||||| || || ||||| |  || |||||||| |||||||| ||||||||||    
T  4220001 atttttcgtcctacctcctattttcaaacttcaaaaacgcagagaaataacagttttag 4219943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 65 - 226
Target Start/End: Complemental strand, 51021341 - 51021180
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| ||||     
T  51021341 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacacaacaaaacggtcctttaattatca-ttttg 51021243  T
Q  165 ttgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 226  Q
    |||||||||||||||| || || ||||| |  ||||| ||||| ||||||||| || ||||||    
T  51021242 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcaattttag 51021180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 65 - 206
Target Start/End: Original strand, 48293593 - 48293734
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |  ||||||||| |||||||  || |||||||||||||||||     
T  48293593 aggcttaattacacttttggtcctcgtgttttggcttactcacgaaattgatcctgtctctttaaaacaaaacaaaattgttcttcaattatcatttttg 48293692  T
Q  165 ttgcatttttcgtcctgccccccattttattctccaaaaacg 206  Q
    ||||||||||| |||||||| |||||||||||||||||||||    
T  48293693 ttgcatttttcatcctgccctccattttattctccaaaaacg 48293734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 68 - 180
Target Start/End: Original strand, 2118295 - 2118407
Alignment:
Q  68 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattg 167  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||||||||||||||||| |||    
T  2118295 cttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacataacaaaatagtccttcaattatcatttttgttg 2118394  T
Q  168 catttttcgtcct 180  Q
    |||||||||||||    
T  2118395 catttttcgtcct 2118407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 134 - 242
Target Start/End: Complemental strand, 12503913 - 12503805
Alignment:
Q  134 gaacaaaacggtccttcaattatcatttttattgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctacc 233  Q
    ||||||||||||||||||| |||||||||| |||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  12503913 gaacaaaacggtccttcaagtatcatttttgttgcatttttcgtcataccccccattttattctccaaaaacgcagagaaatgacagttttagacctacc 12503814  T
Q  234 ccctatgct 242  Q
    |||||||||    
T  12503813 ccctatgct 12503805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 64 - 179
Target Start/End: Original strand, 18751597 - 18751712
Alignment:
Q  64 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 163  Q
    |||| ||||||||||||||||||||||||||||||||||||||  ||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  18751597 aaggtttaattacacttttggtcctcgtgttttggcctactcataaaactggtcatgcccttttaaaacagaacaaaacggtccttcaaatatcattttt 18751696  T
Q  164 attgcatttttcgtcc 179  Q
     |||||||||||||||    
T  18751697 gttgcatttttcgtcc 18751712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 20958403 - 20958266
Alignment:
Q  67 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttatt 166  Q
    |||||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||   |||||||||||||||||||| ||    
T  20958403 gcttaattacacttttagtcctcgtattttggcctactcacgaaaatggtcctgcccttttaaaacagaacaaatatgtccttcaattatcatttttgtt 20958304  T
Q  167 gcatttttcgtcctgccccccattttattctccaaaaacg 206  Q
    |||||||| |||||  |||||||||||| |||||||||||    
T  20958303 gcattttt-gtcct-acccccattttatcctccaaaaacg 20958266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 68 - 181
Target Start/End: Complemental strand, 18764063 - 18763950
Alignment:
Q  68 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattg 167  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||||||||||||||| |||| ||||| |||||||||| |||    
T  18764063 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgtccttttaaaacagaacaaaatggtcattcaagtatcatttttgttg 18763964  T
Q  168 catttttcgtcctg 181  Q
    ||||||||||||||    
T  18763963 catttttcgtcctg 18763950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 44892692 - 44892553
Alignment:
Q  67 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttatt 166  Q
    ||||||||| | ||||||||||||||||||| ||||||||||||| |||| ||||| ||||||||||||||||||| ||| |||||||||  ||||| ||    
T  44892692 gcttaattatatttttggtcctcgtgttttgacctactcacgaaaatggttctgccattttaaaacagaacaaaactgtctttcaattatattttttgtt 44892593  T
Q  167 gcatttttcgtcctgccccccattttattctccaaaaacg 206  Q
    |||||||||||||| ||| ||||||||| |||||||||||    
T  44892592 gcatttttcgtcctaccctccattttatcctccaaaaacg 44892553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 69 - 206
Target Start/End: Complemental strand, 48713888 - 48713751
Alignment:
Q  69 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgc 168  Q
    ||||||||||||||  | |||||||||| ||||||||| |||| ||||| ||| |||||||||||||||||||  |||||||||||||||||||| ||||    
T  48713888 ttaattacacttttaattctcgtgttttagcctactcatgaaaatggtcatgctcttttaaaacagaacaaaattgtccttcaattatcatttttgttgc 48713789  T
Q  169 atttttcgtcctgccccccattttattctccaaaaacg 206  Q
    |||||||||||| ||| ||||||||| |||||||||||    
T  48713788 atttttcgtcctcccctccattttatcctccaaaaacg 48713751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 84 - 206
Target Start/End: Complemental strand, 43243807 - 43243686
Alignment:
Q  84 gtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgcatttttcgtcctgcc 183  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||  || ||||||||||||||||| |||||||||| |||||  |    
T  43243807 gtcctcgtgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaattgttcttcaattatcatttttgttgcattttttgtcct-ac 43243709  T
Q  184 ccccattttattctccaaaaacg 206  Q
    ||||||||||| |||||||||||    
T  43243708 ccccattttatcctccaaaaacg 43243686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 61 - 192
Target Start/End: Complemental strand, 10258437 - 10258306
Alignment:
Q  61 tataaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 160  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||  ||||  ||  |||||||||||||    
T  10258437 tataaggcttaattacacttttggtcctcgtgttgtggcctactcaggaaattggtcctgcccttttaaaacagattaaaattgtttttcaattatcatt 10258338  T
Q  161 tttattgcatttttcgtcctgccccccatttt 192  Q
    ||| ||||| |||| ||| | ||||| |||||    
T  10258337 tttgttgcagttttagtcttaccccctatttt 10258306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 64 - 202
Target Start/End: Original strand, 16690934 - 16691072
Alignment:
Q  64 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 163  Q
    |||| ||||||||| |||||||||| ||||||||  |||||||||||| ||||||||||  ||||||||| |||||||   |||||||||||||||||||    
T  16690934 aaggtttaattacatttttggtccttgtgttttgatctactcacgaaaatggtcctgcctctttaaaacaaaacaaaattatccttcaattatcattttt 16691033  T
Q  164 attgcatttttcgtcctgccccccattttattctccaaa 202  Q
     |||||||||||||||| ||||| ||||||| |||||||    
T  16691034 gttgcatttttcgtcctacccccgattttatcctccaaa 16691072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 66 - 206
Target Start/End: Complemental strand, 48295088 - 48294947
Alignment:
Q  66 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 165  Q
    |||||||||||| |||||||| ||||||||||  |||||||||||||||||| ||||  ||||||||| |||||||  ||| |||||||||||||||| |    
T  48295088 ggcttaattacatttttggtcatcgtgttttgatctactcacgaaattggtcttgcctctttaaaacacaacaaaattgtcattcaattatcatttttgt 48294989  T
Q  166 tgcattttt-cgtcctgccccccattttattctccaaaaacg 206  Q
    ||||||||| |||||| |||||||||||||  ||||||||||    
T  48294988 tgcatttttccgtcctaccccccattttatcttccaaaaacg 48294947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 65 - 202
Target Start/End: Original strand, 48708294 - 48708431
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    |||||||||||||||||||||||  |||||||||||||  ||||||| || |||||||||||||||||| |||||||| ||||||||||||||||||||     
T  48708294 aggcttaattacacttttggtccatgtgttttggcctaaccacgaaaatgatcctgcccttttaaaacacaacaaaactgtccttcaattatcatttttg 48708393  T
Q  165 ttgcatttttcgtcctgccccccattttattctccaaa 202  Q
    |||||||| |  |||| || | |||||||| |||||||    
T  48708394 ttgcatttataatcctaccactcattttatcctccaaa 48708431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 66 - 177
Target Start/End: Complemental strand, 35363146 - 35363034
Alignment:
Q  66 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgccctttt-aaaacagaacaaaacggtccttcaattatcattttta 164  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||| |||| ||||| |||| | |||||||||||| ||||||||||||||||     
T  35363146 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggttctgctcttttaaaaaaaaaacaaaacggtcattcaattatcatttttg 35363047  T
Q  165 ttgcatttttcgt 177  Q
    |||||||||||||    
T  35363046 ttgcatttttcgt 35363034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 84 - 204
Target Start/End: Complemental strand, 43281317 - 43281198
Alignment:
Q  84 gtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgcatttttcgtcctgcc 183  Q
    |||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||  || |||||||||| |||||| |||||||||||||||| ||    
T  43281317 gtcctcgtgttttggcctactcacgaaaatggtcatgccattttaaaacagaacaaaaatgttcttcaattat-atttttgttgcatttttcgtcctacc 43281219  T
Q  184 ccccattttattctccaaaaa 204  Q
    ||||||||||| ||| |||||    
T  43281218 ccccattttatcctcaaaaaa 43281198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 57 - 206
Target Start/End: Original strand, 44890508 - 44890657
Alignment:
Q  57 taattataaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattat 156  Q
    |||||| || ||||||||||| |||||||||| |||||||| |||| |||||||| ||||| |||||||||||||||||||||||   ||||| ||||||    
T  44890508 taattaaaatgcttaattacaattttggtccttgtgttttgacctattcacgaaaatggtcatgcccttttaaaacagaacaaaaatatcctttaattat 44890607  T
Q  157 catttttattgcatttttcgtcctgccccccattttattctccaaaaacg 206  Q
      ||||| ||||||||||| || | ||||||||||||| ||| |||||||    
T  44890608 attttttgttgcatttttcatcataccccccattttatcctcaaaaaacg 44890657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 83 - 226
Target Start/End: Original strand, 12503453 - 12503597
Alignment:
Q  83 ggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgcatttttcgtcctgc 182  Q
    ||||||||||||||| | ||||||||||| || ||| ||| ||||||||||||||||||  |||||||||||||||||||| |||||||||||||||| |    
T  12503453 ggtcctcgtgttttgacttactcacgaaactgatcccgccattttaaaacagaacaaaattgtccttcaattatcatttttgttgcatttttcgtcctac 12503552  T
Q  183 cccccatttt-attctccaaaaacgtagagaaatgacagttttag 226  Q
    | || ||||| |  ||||| ||||| |||||||| ||||||||||    
T  12503553 ctcctattttcaaactccagaaacgcagagaaattacagttttag 12503597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 73 - 204
Target Start/End: Original strand, 20957196 - 20957327
Alignment:
Q  73 ttacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgcattt 172  Q
    ||||| |||||||||||| |||||||| ||||||||||| ||||| | | ||||||||||| |||||||  ||||||||||||||| |||| ||||||||    
T  20957196 ttacatttttggtcctcgagttttggcttactcacgaaaatggtcatactcttttaaaacacaacaaaattgtccttcaattatcaattttgttgcattt 20957295  T
Q  173 ttcgtcctgccccccattttattctccaaaaa 204  Q
    |||||| | | ||||||||||||||| |||||    
T  20957296 ttcgtcatactccccattttattctcaaaaaa 20957327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 64 - 136
Target Start/End: Complemental strand, 16318323 - 16318251
Alignment:
Q  64 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaa 136  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| || |||||||||||||||||||||    
T  16318323 aaggcttaattacacttttggtcctcgtgttttggcctactcacaaaactgatcctgcccttttaaaacagaa 16318251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 66 - 202
Target Start/End: Complemental strand, 16691616 - 16691481
Alignment:
Q  66 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 165  Q
    |||||||||||||||||| |||  |||||||| ||||||||||||| |||||||| ||| || ||||| |||||||  |||||| |||||| |||||| |    
T  16691616 ggcttaattacacttttgatccctgtgttttgacctactcacgaaaatggtcctg-cctctttaaacataacaaaattgtcctttaattattatttttgt 16691518  T
Q  166 tgcatttttcgtcctgccccccattttattctccaaa 202  Q
    ||||||||||||| | || |||||||||| |||||||    
T  16691517 tgcatttttcgtcatacctcccattttatcctccaaa 16691481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 63 - 242
Target Start/End: Original strand, 17503971 - 17504149
Alignment:
Q  63 taaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 162  Q
    ||||||||||||| ||| ||||||||||  ||||| ||  ||||||||| ||||||||||  ||| |||  ||||| ||| |||||  || |||||| ||    
T  17503971 taaggcttaattatactgttggtcctcgcattttgaccatctcacgaaaatggtcctgcctctttcaaatggaacataaccgtccta-aactatcatgtt 17504069  T
Q  163 tattgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    | ||||| |||| ||||| || || |||||   ||||| |||||||||||||||||||||||||||||||||||||||||    
T  17504070 ttttgcagttttagtcctacctcctattttcaactccagaaacgtagagaaatgacagttttagacctaccccctatgct 17504149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 124 - 206
Target Start/End: Original strand, 43242328 - 43242410
Alignment:
Q  124 ttttaaaacagaacaaaacggtccttcaattatcatttttattgcatttttcgtcctgccccccattttattctccaaaaacg 206  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| || || |||||||  ||||||||||    
T  43242328 ttttaaaacagaacaaaacggtcattcaattatcattttttttgcatttttcgtcctacctccaattttatcatccaaaaacg 43242410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 175 - 242
Target Start/End: Complemental strand, 18752038 - 18751971
Alignment:
Q  175 cgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    |||||| ||||| ||||||||||||||||| | |||||||| ||||||||||||||||||||||||||    
T  18752038 cgtcctaccccctattttattctccaaaaatgcagagaaataacagttttagacctaccccctatgct 18751971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 66 - 163
Target Start/End: Original strand, 55189528 - 55189625
Alignment:
Q  66 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 163  Q
    |||||||||| | ||||| ||||||||||||| |||| |||  ||| ||||  ||||||||||||| |||||||||  ||| ||||||||||||||||    
T  55189528 ggcttaattatatttttgatcctcgtgttttgacctattcataaaaatggttatgcccttttaaaatagaacaaaattgtctttcaattatcattttt 55189625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 63 - 119
Target Start/End: Complemental strand, 55677507 - 55677451
Alignment:
Q  63 taaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 119  Q
    |||||||||||||||||||||||||| || ||||| || ||||||||||||||||||    
T  55677507 taaggcttaattacacttttggtccttgtattttgaccaactcacgaaattggtcct 55677451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 127 - 206
Target Start/End: Complemental strand, 44220861 - 44220782
Alignment:
Q  127 taaaacagaacaaaacggtccttcaattatcatttttattgcatttttcgtcctgccccccattttattctccaaaaacg 206  Q
    |||||||||||||||  |||||||| ||||||||||| || |||||||||| || ||||  ||||||| |||||||||||    
T  44220861 taaaacagaacaaaattgtccttcatttatcatttttgtttcatttttcgttctacccctaattttatcctccaaaaacg 44220782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 206
Target Start/End: Complemental strand, 30598065 - 30597926
Alignment:
Q  66 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctg-cccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    ||||| |||||||||||||||||||||||||| || ||||||| ||||||| ||| | |||||||| | ||||||||  |||| | |||||| ||||||     
T  30598065 ggcttgattacacttttggtcctcgtgttttgaccaactcacggaattggttctgtctcttttaaatc-gaacaaaatcgtccctaaattat-atttttg 30597968  T
Q  165 ttgcatttttcgtcctgccccccattttattctccaaaaacg 206  Q
    ||||| |||| |||||  |||| ||||||   ||||||||||    
T  30597967 ttgcacttttggtcctaacccctattttaacatccaaaaacg 30597926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 17504369 - 17504329
Alignment:
Q  202 aaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  17504369 aaacgcagagaaatgacagttttagacctaccccctatgct 17504329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 35193443 - 35193483
Alignment:
Q  202 aaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  35193443 aaacgcagagaaatgacagttttagacctaccccctatgct 35193483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 119
Target Start/End: Original strand, 44219377 - 44219428
Alignment:
Q  68 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 119  Q
    |||||||||||||||||||||||| ||||  || ||||||||||||||||||    
T  44219377 cttaattacacttttggtcctcgtattttaaccaactcacgaaattggtcct 44219428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 65 - 119
Target Start/End: Complemental strand, 46737202 - 46737148
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 119  Q
    |||||||||||||||||||||||| |  ||||| || ||||||||||||||||||    
T  46737202 aggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcct 46737148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 119
Target Start/End: Complemental strand, 21034791 - 21034730
Alignment:
Q  58 aattataaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 119  Q
    |||| ||||||||||||||| |||||||||| |  ||||| || ||||||||||||||||||    
T  21034791 aattttaaggcttaattacaattttggtccttgcattttgaccaactcacgaaattggtcct 21034730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 119
Target Start/End: Complemental strand, 34789937 - 34789876
Alignment:
Q  58 aattataaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 119  Q
    |||||| || ||||||||||||||||||||| |  ||||| || ||||||||||||||||||    
T  34789937 aattattagacttaattacacttttggtccttgcattttgaccaactcacgaaattggtcct 34789876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 209 - 242
Target Start/End: Original strand, 40160236 - 40160269
Alignment:
Q  209 gagaaatgacagttttagacctaccccctatgct 242  Q
    ||||||||||||||||||||||||||||||||||    
T  40160236 gagaaatgacagttttagacctaccccctatgct 40160269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 117
Target Start/End: Complemental strand, 12593570 - 12593518
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtc 117  Q
    |||||||||||||||||||||||| |  ||||| || ||||||||||||||||    
T  12593570 aggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtc 12593518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 231
Target Start/End: Complemental strand, 24336307 - 24336144
Alignment:
Q  68 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattg 167  Q
    |||||||||||||||| ||||||  ||||| |   ||||||||| ||||||||||  ||| |||  ||||||||| || | | ||||||||| ||| |||    
T  24336307 cttaattacacttttgatcctcgcattttgacaagctcacgaaaatggtcctgcctctttcaaatcgaacaaaaccgttcctaaattatcatgttttttg 24336208  T
Q  168 catttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagaccta 231  Q
    |  |||| ||||| ||||  |||||   ||||| ||||||| ||||||| ||| ||||| ||||    
T  24336207 ctcttttagtcctaccccatattttcaactccagaaacgtatagaaatggcagctttagtccta 24336144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 119
Target Start/End: Original strand, 54440573 - 54440624
Alignment:
Q  68 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 119  Q
    ||||||||||||||||||||| |  ||||| || ||||||||||||||||||    
T  54440573 cttaattacacttttggtccttgcattttgaccaactcacgaaattggtcct 54440624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 119
Target Start/End: Original strand, 19528868 - 19528922
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 119  Q
    |||||||||||||||||||||||| |  ||||| || | ||||||||||||||||    
T  19528868 aggcttaattacacttttggtccttgcattttgaccaattcacgaaattggtcct 19528922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 119
Target Start/End: Original strand, 33689828 - 33689882
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 119  Q
    |||||||||||||||||||||||| |  ||||| || |||||| |||||||||||    
T  33689828 aggcttaattacacttttggtccttgcattttgaccaactcacaaaattggtcct 33689882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 119
Target Start/End: Complemental strand, 41608962 - 41608908
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 119  Q
    ||||||||||||||||||||||||    ||||| || ||||||||||||||||||    
T  41608962 aggcttaattacacttttggtcctaccattttgaccaactcacgaaattggtcct 41608908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 119
Target Start/End: Original strand, 45838546 - 45838600
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 119  Q
    ||||||| |||||||||||||||| || ||||| || ||||||| ||||||||||    
T  45838546 aggcttatttacacttttggtccttgtattttgaccaactcacgtaattggtcct 45838600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 117
Target Start/End: Original strand, 34807115 - 34807167
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtc 117  Q
    |||||||||||||||||||||||| |  |||||  | ||||||||||||||||    
T  34807115 aggcttaattacacttttggtccttgcattttgatcaactcacgaaattggtc 34807167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 162; Significance: 1e-86; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 65 - 242
Target Start/End: Complemental strand, 2865301 - 2865124
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  2865301 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 2865202  T
Q  165 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    || ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2865201 tttcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 2865124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 65 - 242
Target Start/End: Complemental strand, 18183515 - 18183338
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  18183515 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 18183416  T
Q  165 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    |||||||||||||||| |||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  18183415 ttgcatttttcgtcctacccctcattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 18183338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 61 - 242
Target Start/End: Original strand, 19359131 - 19359312
Alignment:
Q  61 tataaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 160  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  19359131 tatatggcttaattacacttttggtcctcttgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaacggtccttcaattatcatt 19359230  T
Q  161 tttattgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    ||| |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  19359231 tttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttctagacctaccccctatgct 19359312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 66 - 242
Target Start/End: Complemental strand, 5819474 - 5819298
Alignment:
Q  66 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 165  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| |    
T  5819474 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 5819375  T
Q  166 tgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    ||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||| ||||||||||||||    
T  5819374 tgcatttttcgtcctaccccccattttattctccaaaaacgcaaagaaatgacagttttagatctaccccctatgct 5819298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 66 - 242
Target Start/End: Original strand, 8647438 - 8647614
Alignment:
Q  66 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 165  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| ||||||||||||||||||||| |    
T  8647438 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccgttttaaaacagaacaaaatggtccttcaattatcatttttgt 8647537  T
Q  166 tgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  8647538 tgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccctctatgct 8647614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 63 - 242
Target Start/End: Complemental strand, 29455290 - 29455111
Alignment:
Q  63 taaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 162  Q
    |||||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  29455290 taaggcttaattacacctttggtcctcgtgttttggtctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttt 29455191  T
Q  163 tattgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||    
T  29455190 tgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacatacctcatatgct 29455111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 65 - 242
Target Start/End: Complemental strand, 24362382 - 24362205
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||     
T  24362382 aggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaataaaacggtccttcaagtatcatttttg 24362283  T
Q  165 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||    
T  24362282 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacttatcccctatgct 24362205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 65 - 242
Target Start/End: Original strand, 8460929 - 8461106
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    |||||||||| ||||||||||| |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||     
T  8460929 aggcttaattccacttttggtcatcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 8461028  T
Q  165 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    |||||||||||||| | ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  8461029 ttgcatttttcgtcataccccccattttattctccaaaaatgcagagaaatgacagttttagacctaccccctatgct 8461106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 65 - 238
Target Start/End: Complemental strand, 14215789 - 14215616
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||||||||| ||||||||||     
T  14215789 aggcttaattacaattttggtcctcgtgttttgacctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaagtatcatttttg 14215690  T
Q  165 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccccta 238  Q
    |||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14215689 ttgcatttttcgtcttaacccccattttattctccaaaaacgtagagaaatgacagttttagacctacccccta 14215616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 65 - 242
Target Start/End: Original strand, 15708970 - 15709146
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||||||||     
T  15708970 aggcttaattacacttttggtcctagtgttttggcctactcacgaaactggttatgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 15709069  T
Q  165 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    |||||| |||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  15709070 ttgcatatttcgtcct-acccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 15709146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 65 - 242
Target Start/End: Complemental strand, 164737 - 164560
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    ||||||||||| | ||||| ||||| |||||||||| |||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||     
T  164737 aggcttaattataattttgatcctcatgttttggccaactcactaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 164638  T
Q  165 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    |||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  164637 ttgcattttttgtcctaccccccattttattctccaaaaatgtagagaaatgacagttttagacctaccccctatgct 164560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 69 - 242
Target Start/End: Complemental strand, 15372415 - 15372242
Alignment:
Q  69 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgc 168  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  15372415 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 15372316  T
Q  169 atttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    |||||| || || |  ||||||||||| |||||||||| |||||||||||||||||||||||||| | ||||||    
T  15372315 attttttgttctacatcccattttattttccaaaaacgcagagaaatgacagttttagacctacctcttatgct 15372242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 64 - 242
Target Start/End: Original strand, 16018587 - 16018763
Alignment:
Q  64 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 163  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||| || ||||||||||||| |||||||||||||||||||||||| ||||||    
T  16018587 aaggcttaattacacttttggtcttcgtgttttggcctattcacgaaattgatcatgcccttttaaaatagaacaaaacggtccttcaattat-attttt 16018685  T
Q  164 attgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    |||||||||| ||||||  ||||||||||||||||||||||  |||| |||||||||||||||||||||||||||||||    
T  16018686 attgcattttccgtcct-acccccattttattctccaaaaatatagaaaaatgacagttttagacctaccccctatgct 16018763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 65 - 226
Target Start/End: Complemental strand, 19359682 - 19359520
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  19359682 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 19359583  T
Q  165 ttgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 226  Q
    ||| |||||||||||| || || ||||| |  ||||| ||||||||||||||| |||||||||    
T  19359582 ttggatttttcgtcctacctcctattttcaaactccagaaacgtagagaaatggcagttttag 19359520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 65 - 231
Target Start/End: Complemental strand, 14464066 - 14463901
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| |  |  || |||||||||| ||||||||||| ||||||||||||||||||||    
T  14464066 aggcttaattacacttttagtcctcgtgttttggcctactcacgaaactaattttgtccttttaaaatagaacaaaacgatccttcaattatcattttta 14463967  T
Q  165 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagaccta 231  Q
    ||||||||||||||||  |||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  14463966 ttgcatttttcgtcct-accccaattttattctccaaaaacgcagagaaatgacagttttagaccta 14463901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 88 - 242
Target Start/End: Original strand, 25000112 - 25000266
Alignment:
Q  88 tcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgcatttttcgtcctgcccccc 187  Q
    ||||||||||||||||||||||| |||||| |||||| ||||||||||| |||| ||||||| |||||||||||||||||||||||| ||||| ||||||    
T  25000112 tcgtgttttggcctactcacgaatttggtcatgccctgttaaaacagaataaaatggtcctttaattatcatttttattgcattttttgtcctacccccc 25000211  T
Q  188 attttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| | ||||||    
T  25000212 attttattctccaaaaacgtagagaaatgacagttttagatctacctcatatgct 25000266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 69 - 226
Target Start/End: Original strand, 5818932 - 5819090
Alignment:
Q  69 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgc 168  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  5818932 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttgttgc 5819031  T
Q  169 atttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 226  Q
    |||||||||| | || || ||||| |  ||||| ||||| |||||||||||||||||||    
T  5819032 atttttcgtcttacctcctattttcaaactccagaaacgcagagaaatgacagttttag 5819090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 65 - 226
Target Start/End: Complemental strand, 8647984 - 8647822
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||     
T  8647984 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 8647885  T
Q  165 ttgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 226  Q
    |||||||||||||| | ||  | ||||| |  ||||| ||||| |||||||||||||||||||    
T  8647884 ttgcatttttcgtcataccttctattttcaaactccataaacgcagagaaatgacagttttag 8647822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 69 - 226
Target Start/End: Original strand, 18182973 - 18183131
Alignment:
Q  69 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgc 168  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18182973 ttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 18183072  T
Q  169 atttttcgtcctgcccccca-ttttattctccaaaaacgtagagaaatgacagttttag 226  Q
    |||||||||||| || || | |||||| | ||| ||||| |||||||||||||||||||    
T  18183073 atttttcgtcctacctcctatttttataccccagaaacgcagagaaatgacagttttag 18183131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 68 - 226
Target Start/End: Original strand, 2864756 - 2864915
Alignment:
Q  68 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattg 167  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| || ||||||||||||||| ||||||||||||||||||||||||||||| |||    
T  2864756 cttaattacacttttggtccttgtgttttggcctactcacgaaattgatcatgcccttttaaaacataacaaaacggtccttcaattatcatttttgttg 2864855  T
Q  168 catttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 226  Q
    ||||||||||||| || || ||||| |  ||||| ||||| |||||||||||||||||||    
T  2864856 catttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacagttttag 2864915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 63 - 226
Target Start/End: Complemental strand, 8461479 - 8461315
Alignment:
Q  63 taaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 162  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||||    
T  8461479 taaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgttcctgctcttttaaaacagaacaaaacggtccttcaattatcatttt 8461380  T
Q  163 tattgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 226  Q
    |  ||||||||||||| | || || ||||| |  ||||| ||||| |||||||||||| ||||||    
T  8461379 tgctgcatttttcgtcatacctcctattttcaaactccagaaacgcagagaaatgacaattttag 8461315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 68 - 242
Target Start/End: Complemental strand, 24332107 - 24331929
Alignment:
Q  68 cttaattacactttt-ggtcctcgtgttttggcctactcacgaaattggtcctgccctttt-aaaacagaacaaaacggtccttcaattatcattttta- 164  Q
    ||||||||||||||| |||| || ||||||||| ||||||||||| || ||||||| |||| ||||||||||||||||||||| ||||||||||||||      
T  24332107 cttaattacactttttggtcatcatgttttggcatactcacgaaactgatcctgccttttttaaaacagaacaaaacggtcctgcaattatcattttttg 24332008  T
Q  165 ttgcattttt-cgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    |||||||||| |||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  24332007 ttgcattttttcgtcctaccccccattctattctccaaaaacgcagagaaatgacagttttagacctatcccctatgct 24331929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 72 - 226
Target Start/End: Original strand, 24361843 - 24361997
Alignment:
Q  72 attacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgcatt 171  Q
    |||||||||||||||| | ||||||||||||| ||||||| || || ||||||| ||||||||||||||| |||||||||| |||||||||| |||||||    
T  24361843 attacacttttggtccccatgttttggcctacccacgaaactgatcatgcccttgtaaaacagaacaaaatggtccttcaagtatcatttttgttgcatt 24361942  T
Q  172 tttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttag 226  Q
    ||||||||| ||||||||||||||||||| ||||| |||||||||| ||||||||    
T  24361943 tttcgtcctaccccccattttattctccacaaacgcagagaaatgatagttttag 24361997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 64 - 228
Target Start/End: Complemental strand, 25000636 - 25000471
Alignment:
Q  64 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 163  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||  ||||||||||||||||||| |||| ||||||||||||||||    
T  25000636 aaggcttaattacacttttggtcttcatgttttggcctactcacgaaattggtcatgttcttttaaaacagaacaaaatggtcattcaattatcattttt 25000537  T
Q  164 attgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttagac 228  Q
     |||||||||||||||  || || ||||| |  ||||||||||| |||||||||||||||||||||    
T  25000536 gttgcatttttcgtcccacctcctattttcaaactccaaaaacgcagagaaatgacagttttagac 25000471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 29454737 - 29454901
Alignment:
Q  63 taaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 162  Q
    |||||||||||| ||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  29454737 taaggcttaatttcacttttggtcattgtgttttggcctactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttgaattatcatttt 29454836  T
Q  163 tattgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 226  Q
    |  ||||||||||||||| || || ||||| |  ||||| ||||| |||||||||| ||||||||    
T  29454837 tgctgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgatagttttag 29454901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 72 - 226
Target Start/End: Original strand, 24325218 - 24325372
Alignment:
Q  72 attacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgcatt 171  Q
    |||||||||||||||| | ||||||||||||| ||||||| || || ||||||| ||||||||||||||| |||||||||| |||||||||| | |||||    
T  24325218 attacacttttggtccccatgttttggcctacccacgaaactgatcatgcccttgtaaaacagaacaaaatggtccttcaagtatcatttttgtcgcatt 24325317  T
Q  172 tttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttag 226  Q
    ||||||||| ||||||||||||||||||| ||||| |||||||||| ||||||||    
T  24325318 tttcgtcctaccccccattttattctccacaaacgcagagaaatgatagttttag 24325372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 66 - 206
Target Start/End: Complemental strand, 7349562 - 7349422
Alignment:
Q  66 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 165  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| ||||||||  ||||||| ||||||||||| |    
T  7349562 ggcttaattacacttttggtcctcgtgttttggtctactcacgaaattggtcctgctcttttaaaacaaaacaaaactatccttcagttatcatttttgt 7349463  T
Q  166 tgcatttttcgtcctgccccccattttattctccaaaaacg 206  Q
    |||| ||||| |||| ||||||||||| | |||||||||||    
T  7349462 tgcacttttcatcctaccccccattttttcctccaaaaacg 7349422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 68 - 226
Target Start/End: Original strand, 14215243 - 14215402
Alignment:
Q  68 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattg 167  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||  | ||||||||||||||||||||| ||||||||| ||||||||||| |||    
T  14215243 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggttatacccttttaaaacagaacaaaaaggtccttcagttatcatttttgttg 14215342  T
Q  168 catttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 226  Q
    ||||||||||||| || || ||||| |  ||||| ||||| |||||||||||||||||||    
T  14215343 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 14215402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 65 - 226
Target Start/End: Original strand, 24331558 - 24331722
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatc--atttt 162  Q
    |||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||   ||||    
T  24331558 aggcttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatctattttt 24331657  T
Q  163 tattgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 226  Q
    | ||||||||||| ||||  | || ||||| |  ||||| ||||| |||||||||||||||||||    
T  24331658 tgttgcatttttcatcctagctcctattttcaaactccagaaacgcagagaaatgacagttttag 24331722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 66 - 225
Target Start/End: Original strand, 164191 - 164350
Alignment:
Q  66 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 165  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| |||| |||||||||||| ||||||||||| |||| |    
T  164191 ggcttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttataacaaaacaaaacggtcattcaattatca-ttttgt 164289  T
Q  166 tgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagtttta 225  Q
    ||||||||||||||| || || ||||| |  ||||| ||||| |||||||||||| |||||    
T  164290 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacaatttta 164350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 69 - 228
Target Start/End: Complemental strand, 16019129 - 16018969
Alignment:
Q  69 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgc 168  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||| |||| |||| ||| ||||||||||||||||| |||     
T  16019129 ttaattacacttttggtcctcatgttttggcatactcacgaaattggtcctgctcttttaaaatagaataaaatggttcttcaattatcatttttgttgt 16019030  T
Q  169 atttttcgtcctgcccccca-ttttattctccaaaaacgtagagaaatgacagttttagac 228  Q
    |||||||||||| || || | |||||  ||||| ||||| |||||||||||||||||||||    
T  16019029 atttttcgtcctacctcctatttttaaactccagaaacgcagagaaatgacagttttagac 16018969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 66 - 207
Target Start/End: Original strand, 4623148 - 4623287
Alignment:
Q  66 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 165  Q
    ||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||  |||||||||||||||||  ||||||||||||||||||||||    
T  4623148 ggcttaattacacttttggtcatcgtgttttgacttactcacgaaattggtcctgcctctttaaaacagaacaaaattgtccttcaattatcatttttat 4623247  T
Q  166 tgcatttttcgtcctgccccccattttattctccaaaaacgt 207  Q
     ||||||| ||||||   ||||||||||| ||||||||||||    
T  4623248 ggcattttccgtcct--accccattttatcctccaaaaacgt 4623287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 67 - 186
Target Start/End: Complemental strand, 4222266 - 4222147
Alignment:
Q  67 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttatt 166  Q
    |||||||||||||||||||||||||||||||| || ||||||||| ||||| |||||||||||||||||||||||  ||| |||| ||||||||||||||    
T  4222266 gcttaattacacttttggtcctcgtgttttgggcttctcacgaaaatggtcatgcccttttaaaacagaacaaaattgtcattcagttatcatttttatt 4222167  T
Q  167 gcatttttcgtcctgccccc 186  Q
    |||||||||||||| |||||    
T  4222166 gcatttttcgtcctaccccc 4222147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 68 - 179
Target Start/End: Original strand, 15371873 - 15371983
Alignment:
Q  68 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattg 167  Q
    |||||||||||||||| ||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||    
T  15371873 cttaattacacttttgatcctcgtattttggtctactcacgaa-ttggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgttg 15371971  T
Q  168 catttttcgtcc 179  Q
    ||||||||||||    
T  15371972 catttttcgtcc 15371983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 60 - 192
Target Start/End: Original strand, 7348553 - 7348685
Alignment:
Q  60 ttataaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcat 159  Q
    ||||| |||||||||||| ||||||||||| |||||| | |||||||||||||||||| ||||||||||||||||||||||||  ||||||  |||||||    
T  7348553 ttatatggcttaattacatttttggtcctcatgttttagtctactcacgaaattggtcgtgcccttttaaaacagaacaaaactttccttcggttatcat 7348652  T
Q  160 ttttattgcatttttcgtcctgccccccatttt 192  Q
    |||| ||||| |||||||||| |||||||||||    
T  7348653 ttttgttgcacttttcgtcctaccccccatttt 7348685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 66 - 226
Target Start/End: Complemental strand, 15709513 - 15709353
Alignment:
Q  66 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 165  Q
    ||||||||||||||||||||| | ||||||||||||||||| |||| | ||| |||||||| |||||||||||||||||||||| | ||||||||| | |    
T  15709513 ggcttaattacacttttggtcattgtgttttggcctactcatgaaactagtcatgcccttt-aaaacagaacaaaacggtcctttagttatcatttctgt 15709415  T
Q  166 tgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 226  Q
    ||||||||||||||| || || ||||| |  ||||| || || |||||||||||||||||||    
T  15709414 tgcatttttcgtcctacctcctattttcaaactccataagcgcagagaaatgacagttttag 15709353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 66 - 204
Target Start/End: Original strand, 4219663 - 4219800
Alignment:
Q  66 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 165  Q
    |||||||||||||||||| |||||||||||||| ||| | || ||| ||||| |||| |||||||||||||||||   |||||| | ||||||||||| |    
T  4219663 ggcttaattacacttttgatcctcgtgttttgggctatttacaaaaatggtcatgcctttttaaaacagaacaaagttgtcctttagttatcatttttgt 4219762  T
Q  166 tgcatttttcgtcctgccccccattttattctccaaaaa 204  Q
    |||||||||||||||  |||||||||||| |||||||||    
T  4219763 tgcatttttcgtcct-acccccattttatcctccaaaaa 4219800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 79 - 205
Target Start/End: Complemental strand, 4624757 - 4624631
Alignment:
Q  79 ttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgcatttttcgtc 178  Q
    |||| |||||||||||||  ||||||||||||||||||| || |  ||||||||| ||||||||  || |||||||||||||| | ||||||||||||||    
T  4624757 ttttcgtcctcgtgttttaacctactcacgaaattggtcatgtctctttaaaacataacaaaactatcattcaattatcatttatgttgcatttttcgtc 4624658  T
Q  179 ctgccccccattttattctccaaaaac 205  Q
    || ||||||||||||| || |||||||    
T  4624657 ctaccccccattttatccttcaaaaac 4624631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 72 - 204
Target Start/End: Complemental strand, 6019309 - 6019177
Alignment:
Q  72 attacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgca-t 170  Q
    |||||| |||||||| || ||||||||| ||||||||||| || || ||| |||||||||||||||||||| ||| || ||||||||||||| ||||| |    
T  6019309 attacatttttggtcatcatgttttggc-tactcacgaaactgatcttgctcttttaaaacagaacaaaactgtcttttaattatcatttttgttgcatt 6019211  T
Q  171 ttttcgtcctgccccccattttattctccaaaaa 204  Q
    |||||||||| || |||||||||| |||||||||    
T  6019210 ttttcgtcctacctcccattttatcctccaaaaa 6019177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 5501683 - 5501747
Alignment:
Q  1 cgagatgagttgtctaagatggagcaattaccgcagagattaatgctatagagtggtaattataa 65  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  5501683 cgagatgagttgtctaagatggagcaattaccgctgagattaatgctatagagtggtaattataa 5501747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 67 - 205
Target Start/End: Original strand, 6018315 - 6018452
Alignment:
Q  67 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttatt 166  Q
    ||||||||||| ||||||| |||||||||||  |||||||||||| ||||| || ||||||||||||||||||||   | ||||||||||||||||| ||    
T  6018315 gcttaattacatttttggttctcgtgttttgttctactcacgaaactggtcatgtccttttaaaacagaacaaaattat-cttcaattatcatttttgtt 6018413  T
Q  167 gcatttttcgtcctgccccccattttattctccaaaaac 205  Q
    ||| |||| ||||| ||| | |||||   ||||||||||    
T  6018414 gcagttttagtcctaccctctattttcacctccaaaaac 6018452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 117 - 206
Target Start/End: Complemental strand, 13814226 - 13814133
Alignment:
Q  117 cctgcccttttaaaacagaacaaaacggtcct-----tcaattatcatttttattgcatttttcgtcctgccccccattttattctccaaaaacg 206  Q
    |||||||||||||| ||||||||||| ||| |     ||||||||||||||| ||||| ||||||||||  |||||||||||| |||||||||||    
T  13814226 cctgcccttttaaatcagaacaaaactgtcatgtctttcaattatcatttttgttgcacttttcgtcct-acccccattttatcctccaaaaacg 13814133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 228
Target Start/End: Complemental strand, 41834607 - 41834443
Alignment:
Q  64 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcat-ttt 162  Q
    |||||||||||||||||||||||||||  ||||| ||  ||||||||| ||||||||||  ||| | |  ||||||||| |||| | || |||||| |||    
T  41834607 aaggcttaattacacttttggtcctcgcattttgaccagctcacgaaaatggtcctgcctctttcagatcgaacaaaaccgtcc-taaactatcatgttt 41834509  T
Q  163 tattgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagac 228  Q
    | ||||| |||| ||||| || || |||||   |||   ||||| |||||||||||||||||||||    
T  41834508 ttttgcagttttagtcctacctcctattttcaactcttgaaacgcagagaaatgacagttttagac 41834443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 226
Target Start/End: Original strand, 10721787 - 10721945
Alignment:
Q  67 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttatt 166  Q
    ||||||||||| |||||||||||   ||||| ||  ||||||||| ||||| || |  ||| |||  ||||||||  |||||  || |||||| ||| ||    
T  10721787 gcttaattacatttttggtcctcacattttgaccagctcacgaaaatggtcttgtctctttcaaatcgaacaaaatcgtccta-aactatcatgtttttt 10721885  T
Q  167 gcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttag 226  Q
    ||| |||| ||||| || || |||||   ||||| |||||||||||||||||||||||||    
T  10721886 gcagttttagtcctacctcctattttcaactccagaaacgtagagaaatgacagttttag 10721945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 242
Target Start/End: Complemental strand, 24325639 - 24325580
Alignment:
Q  183 cccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    |||||||||||||||||| ||    ||||||||||||||||||||| || ||||||||||    
T  24325639 cccccattttattctccagaagtacagagaaatgacagttttagacttatcccctatgct 24325580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 226
Target Start/End: Complemental strand, 14340823 - 14340793
Alignment:
Q  196 ctccaaaaacgtagagaaatgacagttttag 226  Q
    |||||||||||||||||||||||||||||||    
T  14340823 ctccaaaaacgtagagaaatgacagttttag 14340793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 226
Target Start/End: Original strand, 14462686 - 14462769
Alignment:
Q  148 ttcaattatcatttttattgcatttttcgtcctgccccccatttt-attctc----caaaaacgtagagaaatgacagttttag 226  Q
    |||||||||||||||| |||||||||||||||| || || ||||| |  |||    || |||||||||||||||||||||||||    
T  14462686 ttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagacagaaacgtagagaaatgacagttttag 14462769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 242
Target Start/End: Original strand, 16752711 - 16752757
Alignment:
Q  196 ctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    ||||| ||||| | |||||||| ||||||||||||||||||||||||    
T  16752711 ctccataaacgcaaagaaatgatagttttagacctaccccctatgct 16752757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 117
Target Start/End: Complemental strand, 15029856 - 15029804
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtc 117  Q
    |||||||||||||||||||||||||   ||||| || |||||||||| |||||    
T  15029856 aggcttaattacacttttggtcctcccattttgaccaactcacgaaaatggtc 15029804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 141
Target Start/End: Complemental strand, 22651858 - 22651782
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaa 141  Q
    |||||||||||||||||| |||||||  ||||| ||  ||||||||| |||| ||||| |||| |||  ||||||||    
T  22651858 aggcttaattacactttttgtcctcgcattttgaccagctcacgaaaatggttctgcctttttcaaatcgaacaaaa 22651782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 119
Target Start/End: Complemental strand, 32697771 - 32697719
Alignment:
Q  67 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 119  Q
    |||||||||||||||||||| | |  ||||| || ||||||||||||||||||    
T  32697771 gcttaattacacttttggtcattgcattttgaccaactcacgaaattggtcct 32697719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 159; Significance: 9e-85; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 64 - 242
Target Start/End: Complemental strand, 50970825 - 50970647
Alignment:
Q  64 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 163  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50970825 aaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 50970726  T
Q  164 attgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
     |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  50970725 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 50970647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 65 - 242
Target Start/End: Original strand, 18984118 - 18984295
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  18984118 aggcttaattacacttttggtcctcgtgttttggtctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 18984217  T
Q  165 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||    
T  18984218 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgatagttttagacctaacccctatgct 18984295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 62 - 242
Target Start/End: Original strand, 29869616 - 29869796
Alignment:
Q  62 ataaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 161  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  29869616 ataaggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattattattt 29869715  T
Q  162 ttattgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    || |||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  29869716 ttgttgcatttttcgtcctacaccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 29869796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 64 - 235
Target Start/End: Complemental strand, 5540365 - 5540194
Alignment:
Q  64 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 163  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  5540365 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgtccttttaaaacagaagaaaacggtccttcaattatcattttt 5540266  T
Q  164 attgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 235  Q
     |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  5540265 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctacccc 5540194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 63 - 235
Target Start/End: Complemental strand, 15646743 - 15646571
Alignment:
Q  63 taaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 162  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || |||| ||||||||||||||||||||||||||||||||||||||||||    
T  15646743 taaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctacccttttaaaacagaacaaaacggtccttcaattatcatttt 15646644  T
Q  163 tattgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 235  Q
    | |||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  15646643 tgttgcatttttcgtcctacccccaattttattctccaaaaacgcagagaaatgacagttttagacctacccc 15646571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 60 - 242
Target Start/End: Original strand, 15173090 - 15173272
Alignment:
Q  60 ttataaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcat 159  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||  |||||||||||| |||||||||||||    
T  15173090 ttatcaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaattgaacaaaacggttcttcaattatcat 15173189  T
Q  160 ttttattgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  15173190 ttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 15173272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 68 - 242
Target Start/End: Complemental strand, 33144462 - 33144288
Alignment:
Q  68 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattg 167  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||| |||||||||| |||    
T  33144462 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggaccttcaaatatcatttttgttg 33144363  T
Q  168 catttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  33144362 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccctctatgct 33144288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 66 - 235
Target Start/End: Original strand, 29306953 - 29307122
Alignment:
Q  66 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 165  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||||||| |    
T  29306953 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcatgtccttttaaaacagaacaaaacggtccttcaattatcatttttgt 29307052  T
Q  166 tgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 235  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  29307053 tgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctacccc 29307122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 63 - 242
Target Start/End: Complemental strand, 5963126 - 5962947
Alignment:
Q  63 taaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 162  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||| |||||||||| ||| |||||||||||||||    
T  5963126 taaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaatagaacaaaacagtctttcaattatcatttt 5963027  T
Q  163 tattgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    | |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  5963026 tgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 5962947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 66 - 242
Target Start/End: Complemental strand, 21856588 - 21856412
Alignment:
Q  66 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 165  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| || ||||||| ||||||||||||||||||||||||||||| ||||||||||      
T  21856588 ggcttaattacacttttggtcctcgtgttttggcctactcatgaaactgatcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgc 21856489  T
Q  166 tgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    ||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  21856488 tgcatttttcgtcctactccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 21856412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 66 - 242
Target Start/End: Complemental strand, 8679086 - 8678911
Alignment:
Q  66 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 165  Q
    ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |||| |||||||||||||||| |    
T  8679086 ggcttaattacacttttggtcctcgtgttttggcctactcacggaactggtcctgcccttttaaaacagaacaaaaaggtcattcaattatcatttttgt 8678987  T
Q  166 tgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    |||||||||||||||  || ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  8678986 tgcatttttcgtcct-acctccattttattctccaaaaatgcagagaaatgacagttttagacctaccccctatgct 8678911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 65 - 242
Target Start/End: Original strand, 9018972 - 9019149
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| |||| ||||||||||||||||||||||||||||| ||||| ||||||||||     
T  9018972 aggcttaattacacttttggtcctcgtgttttggcctactaacgaaactggttctgcccttttaaaacagaacaaaacggtcattcaactatcatttttg 9019071  T
Q  165 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||| | | ||||||| ||||||||||||||    
T  9019072 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaattatatttttagatctaccccctatgct 9019149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 66 - 242
Target Start/End: Original strand, 17433216 - 17433392
Alignment:
Q  66 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 165  Q
    |||||||||||||||||||||||| |||||||||||||||| |||| ||  | |||||||||||||||||||||||||||||||||| |||||||||| |    
T  17433216 ggcttaattacacttttggtcctcatgttttggcctactcatgaaactgaccatgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgt 17433315  T
Q  166 tgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    |||||||||| |||| ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  17433316 tgcatttttcatcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctatcccctatgct 17433392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 65 - 240
Target Start/End: Complemental strand, 26859605 - 26859431
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||| |  |||||||||||||||||||||||| |||||||||||||||||||||||     
T  26859605 aggcttaattacacttttgatcctcgtgttttgggctactcacgaaactaatcctgcccttttaaaacagaacaatacggtccttcaattatcatttttg 26859506  T
Q  165 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatg 240  Q
    |||||||||||||||| ||||||| ||||||||||||||||| |||||||| | ||||||||||||||| ||||||    
T  26859505 ttgcatttttcgtcctacccccca-tttattctccaaaaacgcagagaaataatagttttagacctacctcctatg 26859431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 66 - 235
Target Start/End: Complemental strand, 29307487 - 29307317
Alignment:
Q  66 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 165  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  29307487 ggcttaattgcacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 29307388  T
Q  166 tgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttagacctacccc 235  Q
    ||||||||||||||| || || ||||| |  ||||| ||||| ||||||||||||||||||||||||||||    
T  29307387 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttagacctacccc 29307317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 68 - 242
Target Start/End: Original strand, 39154021 - 39154195
Alignment:
Q  68 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattg 167  Q
    ||||||||||||||||||| || ||||||||| ||||||||||| || || |||||||||||||||||||||||||||||| |||||||||||||| |||    
T  39154021 cttaattacacttttggtcatcatgttttggcatactcacgaaactgatcatgcccttttaaaacagaacaaaacggtcctgcaattatcatttttgttg 39154120  T
Q  168 catttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    ||||||||||||| ||||||||| ||||||||||||||| | |||||||||||||||||||| | ||||||||||    
T  39154121 catttttcgtcctaccccccattctattctccaaaaacgcatagaaatgacagttttagacccatcccctatgct 39154195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 63 - 180
Target Start/End: Complemental strand, 18984667 - 18984550
Alignment:
Q  63 taaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 162  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18984667 taaggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 18984568  T
Q  163 tattgcatttttcgtcct 180  Q
    | ||||||||||||||||    
T  18984567 tgttgcatttttcgtcct 18984550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 67 - 226
Target Start/End: Original strand, 5539817 - 5539977
Alignment:
Q  67 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttatt 166  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  5539817 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 5539916  T
Q  167 gcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 226  Q
    | |||||||||||| || || ||||| |  ||||| ||||| | ||||||| |||||||||    
T  5539917 gtatttttcgtcctacctcctattttcaaactccataaacgcatagaaatggcagttttag 5539977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 68 - 228
Target Start/End: Complemental strand, 17433758 - 17433597
Alignment:
Q  68 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattg 167  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||    
T  17433758 cttaattacacttttggtcctcgtgttctggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 17433659  T
Q  168 catttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttagac 228  Q
    ||||||||||||| || || ||||| |  || || ||||| |||||||||||||||||||||    
T  17433658 catttttcgtcctacctcctattttcaaacttcagaaacgcagagaaatgacagttttagac 17433597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 65 - 224
Target Start/End: Original strand, 50970277 - 50970437
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||     
T  50970277 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaatcagaacaaaacggtccttcaattatcatttttg 50970376  T
Q  165 ttgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagtttt 224  Q
    |||||||||||||||| ||  | ||||| |  ||||| ||||| |||||||||||||||||    
T  50970377 ttgcatttttcgtcctaccttctattttcaaactccagaaacgcagagaaatgacagtttt 50970437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 63 - 206
Target Start/End: Original strand, 52268287 - 52268430
Alignment:
Q  63 taaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 162  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||    
T  52268287 taaggcttaattacacttttggtcctcgtattttggcctgctcacgaaattggtcctgcccttttaaaacagaacaaaactgtcattcagttatcatttt 52268386  T
Q  163 tattgcatttttcgtcctgccccccattttattctccaaaaacg 206  Q
    | ||||| |||||||||| ||||||||||| | |||||||||||    
T  52268387 tgttgcacttttcgtcctaccccccattttttcctccaaaaacg 52268430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 64 - 226
Target Start/End: Original strand, 33143913 - 33144078
Alignment:
Q  64 aaggcttaatta--cacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 161  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  33143913 aaggcttaattatacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 33144012  T
Q  162 ttattgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 226  Q
    || |||||| ||||||||| || || ||||| |  ||| | ||||| |||||||||||||||||||    
T  33144013 tttttgcatatttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttag 33144078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 67 - 180
Target Start/End: Original strand, 8678542 - 8678655
Alignment:
Q  67 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttatt 166  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||    
T  8678542 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacaaaacaaaacggtccttcaattatcatttttgtt 8678641  T
Q  167 gcatttttcgtcct 180  Q
    ||||||||||||||    
T  8678642 gcatttttcgtcct 8678655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 66 - 226
Target Start/End: Complemental strand, 29870164 - 29870003
Alignment:
Q  66 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 165  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||||||||||||||| |    
T  29870164 ggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttgt 29870065  T
Q  166 tgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 226  Q
    ||||||||||||||| || || ||||| |  ||  | ||||| |||||||||||||||||||    
T  29870064 tgcatttttcgtcctacctcctattttcaaactttagaaacgcagagaaatgacagttttag 29870003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 67 - 225
Target Start/End: Complemental strand, 4636515 - 4636356
Alignment:
Q  67 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttatt 166  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||||||||||||||||| ||    
T  4636515 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacgatccttcaattatcatttttgtt 4636416  T
Q  167 gcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagtttta 225  Q
    |||||||||||||  || || ||||| |  ||||| ||||| |||||||||||| |||||    
T  4636415 gcatttttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacaatttta 4636356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 68 - 226
Target Start/End: Original strand, 21856044 - 21856203
Alignment:
Q  68 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattg 167  Q
    ||||||||||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  21856044 cttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 21856143  T
Q  168 catttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 226  Q
    |||||||| ||||  | || ||||| |  ||||| ||||| |||||||||||||||||||    
T  21856144 catttttcatcctagctcctattttcaaactccagaaacgcagagaaatgacagttttag 21856203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 64 - 226
Target Start/End: Complemental strand, 39154567 - 39154404
Alignment:
Q  64 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 163  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||| |||||||||||||||||||||    
T  39154567 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacataacaaaatggtccttcaattatcattttt 39154468  T
Q  164 attgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 226  Q
     |||||||||||||||| || || ||||| |  || || ||||| |||||||||||| ||||||    
T  39154467 gttgcatttttcgtcctacctcctattttcaaacttcagaaacgcagagaaatgacaattttag 39154404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 65 - 226
Target Start/End: Complemental strand, 15173639 - 15173478
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||| |||||||||||||||||||||     
T  15173639 aggcttaattacacttttggtcctcgtgttttggcctactcacaaaactggtcctgcc-ttttaaaacagaacaaaatggtccttcaattatcatttttg 15173541  T
Q  165 ttgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 226  Q
    |||||||||||||||| || || ||||| |  ||| | ||||| |||||||||||||||||||    
T  15173540 ttgcatttttcgtcctacctcctattttcaaactctataaacgcagagaaatgacagttttag 15173478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 65 - 235
Target Start/End: Complemental strand, 9019509 - 9019338
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||| |||| ||||| ||||||||||||||||||||||| ||||||||||||||||     
T  9019509 aggcttaattacacttttggtcctcgtgttttgacctactcacaaaactggttctgccattttaaaacagaacaaaacggtcattcaattatcatttttg 9019410  T
Q  165 ttgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttagacctacccc 235  Q
    |||||||||||||||| || || ||||| |  | ||| ||||| |||||||| |||||||||||||| ||||    
T  9019409 ttgcatttttcgtcctacctcctattttcaaaccccagaaacgcagagaaataacagttttagacctgcccc 9019338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 65 - 226
Target Start/End: Original strand, 15646191 - 15646353
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||| |||||||||||||||||     
T  15646191 aggcttaattatacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaatggtacttcaattatcatttttg 15646290  T
Q  165 ttgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 226  Q
    |||||||||||||||| || |  ||||| |  ||||| ||| | |||||||||||||||||||    
T  15646291 ttgcatttttcgtcctacctcatattttcaaactccataaatgcagagaaatgacagttttag 15646353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 66 - 180
Target Start/End: Original strand, 26859059 - 26859173
Alignment:
Q  66 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 165  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| |    
T  26859059 ggcttaattacacttttggtccttgtgttttggcctactaacgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttgt 26859158  T
Q  166 tgcatttttcgtcct 180  Q
    |||||||||||||||    
T  26859159 tgcatttttcgtcct 26859173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 126 - 240
Target Start/End: Original strand, 4636033 - 4636146
Alignment:
Q  126 ttaaaacagaacaaaacggtccttcaattatcatttttattgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagtttta 225  Q
    ||||||||||||||| ||||||||||| |||||||||| |||||||||| || || |||||||||||||||| |||||||| ||||||||||||||||||    
T  4636033 ttaaaacagaacaaa-cggtccttcaagtatcatttttgttgcattttttgttctaccccccattttattcttcaaaaacgcagagaaatgacagtttta 4636131  T
Q  226 gacctaccccctatg 240  Q
    |||||||||||||||    
T  4636132 gacctaccccctatg 4636146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 67 - 226
Target Start/End: Original strand, 5962579 - 5962739
Alignment:
Q  67 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttatt 166  Q
    ||||||||||| |||||||||||||||| ||| ||| |||||||| |||||| ||||||||||||||||||||||||||| ||||| |||||||||| ||    
T  5962579 gcttaattacatttttggtcctcgtgttatggtctattcacgaaactggtccggcccttttaaaacagaacaaaacggtctttcaactatcatttttgtt 5962678  T
Q  167 gcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 226  Q
    ||||||||||| || || || ||||| |  ||||| ||||  |||| ||||||||||||||    
T  5962679 gcatttttcgttctacctcctattttcaaactccagaaacacagagtaatgacagttttag 5962739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 65 - 152
Target Start/End: Complemental strand, 2733503 - 2733416
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaa 152  Q
    ||||||||||| |||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  2733503 aggcttaattatacttttggtccttgtgttttggcctattcgcgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaa 2733416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 68 - 180
Target Start/End: Complemental strand, 52269291 - 52269179
Alignment:
Q  68 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattg 167  Q
    |||||||||||||||||||||||||||||| | |||||| ||||| ||| ||||||||||||||||||||||||  ||| |||| ||||||||||| |||    
T  52269291 cttaattacacttttggtcctcgtgttttgacttactcatgaaatcggttctgcccttttaaaacagaacaaaaatgtcattcagttatcatttttgttg 52269192  T
Q  168 catttttcgtcct 180  Q
    || ||||||||||    
T  52269191 cacttttcgtcct 52269179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 66 - 226
Target Start/End: Original strand, 17112282 - 17112442
Alignment:
Q  66 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 165  Q
    |||||||||||||||||||| ||| |||||||  ||||||| |||||||||   |||||||||||| |||| ||||  ||||||||||||||||||||||    
T  17112282 ggcttaattacacttttggttctcatgttttgatctactcatgaaattggtag-gcccttttaaaatagaataaaatagtccttcaattatcatttttat 17112380  T
Q  166 tgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 226  Q
    ||||||||||||||| || || ||||| |  ||||| ||||| ||| |||||| ||||||||    
T  17112381 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagaaaaatgatagttttag 17112442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 68 - 141
Target Start/End: Original strand, 47826966 - 47827039
Alignment:
Q  68 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaa 141  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||||| | |||||||    
T  47826966 cttaattacacttttggtcctcgtgttttggtctactcacgaaaatggtcatgcccttttaaaatataacaaaa 47827039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 74 - 163
Target Start/End: Complemental strand, 47827125 - 47827036
Alignment:
Q  74 tacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 163  Q
    |||||||||| ||  | ||||||||||||||||||||| ||||| |||||||||||||||||||||||  |||||| |||||||||||||    
T  47827125 tacacttttgatctccttgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaattgtcctttaattatcattttt 47827036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 66 - 147
Target Start/End: Complemental strand, 50419806 - 50419725
Alignment:
Q  66 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtcc 147  Q
    ||||||||| ||||||||||| |||  ||| | || ||||||||||||||||||||| ||||||||  ||||||||||||||    
T  50419806 ggcttaattgcacttttggtcatcgcatttagaccaactcacgaaattggtcctgcctttttaaaattgaacaaaacggtcc 50419725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 119
Target Start/End: Original strand, 29438928 - 29438983
Alignment:
Q  64 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 119  Q
    ||||||||||||||||||||||||| |  ||||| || ||||||||||||||||||    
T  29438928 aaggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcct 29438983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 127
Target Start/End: Complemental strand, 39843573 - 39843509
Alignment:
Q  63 taaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgccctttt 127  Q
    |||||||| |||||||||| ||||||||  ||| | || ||||||||||||||||||||| ||||    
T  39843573 taaggctttattacactttcggtcctcgcatttagaccaactcacgaaattggtcctgccttttt 39843509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 228
Target Start/End: Complemental strand, 44802718 - 44802555
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    |||||||||||||||||||||||| |  ||||| ||  ||||||||| ||||| ||||  ||| |||| ||||||||  |||| | || |||||| |||     
T  44802718 aggcttaattacacttttggtccttgcattttgaccagctcacgaaagtggtcatgcctctttcaaacggaacaaaatcgtccctaaactatcatgtttt 44802619  T
Q  165 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagac 228  Q
    ||||| |||| || || || || |||||   ||||| ||||  ||| |||||||| ||||||||    
T  44802618 ttgcagttttagttctacctcctattttcaactccagaaacacagaaaaatgacaattttagac 44802555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 236
Target Start/End: Complemental strand, 17088550 - 17088516
Alignment:
Q  202 aaacgtagagaaatgacagttttagacctaccccc 236  Q
    ||||| |||||||||||||||||||||||||||||    
T  17088550 aaacgcagagaaatgacagttttagacctaccccc 17088516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 127
Target Start/End: Original strand, 52233737 - 52233799
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgccctttt 127  Q
    |||||||||||||||||| ||||||| |||||  || ||| ||||||||||| || |||||||    
T  52233737 aggcttaattacacttttcgtcctcgggttttaaccaacttacgaaattggtgctaccctttt 52233799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 207
Target Start/End: Complemental strand, 52235215 - 52235073
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    ||||||||||||||||||| |||||   ||||  || |||||||||| || |||||||||||| |||  |||| || | |||| |  | |||||| |||     
T  52235215 aggcttaattacacttttgatcctcagattttaaccaactcacgaaactgatcctgcccttttcaaatcgaacgaagcagtccctatactatcatgtttc 52235116  T
Q  165 ttgcatttttcgtcctgccccccattttattctccaaaaacgt 207  Q
    ||||| |||| |||||  ||| |||||||  ||||||||||||    
T  52235115 ttgcaattttggtcctaaccctcattttaccctccaaaaacgt 52235073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 117
Target Start/End: Original strand, 50304441 - 50304490
Alignment:
Q  68 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtc 117  Q
    |||||||||||||||||||||||  ||||| || |||||||||| |||||    
T  50304441 cttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtc 50304490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 117
Target Start/End: Complemental strand, 17641912 - 17641864
Alignment:
Q  69 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtc 117  Q
    ||||||||||||||||||||||  ||||| || |||||||||| |||||    
T  17641912 ttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtc 17641864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 155; Significance: 2e-82; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 64 - 242
Target Start/End: Original strand, 37786765 - 37786943
Alignment:
Q  64 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 163  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  37786765 aaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacataacaaaacggtccttcaattatcattttt 37786864  T
Q  164 attgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
     |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  37786865 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 37786943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 69 - 242
Target Start/End: Original strand, 19830423 - 19830596
Alignment:
Q  69 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgc 168  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  19830423 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 19830522  T
Q  169 atttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  19830523 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 19830596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 66 - 242
Target Start/End: Original strand, 19590525 - 19590701
Alignment:
Q  66 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 165  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  19590525 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 19590624  T
Q  166 tgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    |||||||||| |||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  19590625 tgcatttttcatcctaccccccattttattctccaaaaacccagagaaatgacagttttagacctaccccctatgct 19590701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 64 - 242
Target Start/End: Complemental strand, 29100398 - 29100220
Alignment:
Q  64 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 163  Q
    |||| |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  29100398 aaggtttaattacacttttggtcctcgtgttttggtctactcacaaaattggtcctgcccttttaaaacagaacaaaacggtctttcaattatcattttt 29100299  T
Q  164 attgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
     |||||||||| ||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  29100298 gttgcattttttgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 29100220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 64 - 242
Target Start/End: Original strand, 38858641 - 38858819
Alignment:
Q  64 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 163  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  38858641 aaggcttaataacacttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggtcattcaattatcattttt 38858740  T
Q  164 attgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
     |||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  38858741 gttgcatttttggtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctacccactatgct 38858819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 65 - 240
Target Start/End: Complemental strand, 35289447 - 35289272
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||      
T  35289447 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttgg 35289348  T
Q  165 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatg 240  Q
    |||||||||||||| | ||||||||||||||||| ||||||| |||||||| | ||||||||||||||||||||||    
T  35289347 ttgcatttttcgtcataccccccattttattctctaaaaacgcagagaaataatagttttagacctaccccctatg 35289272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 66 - 240
Target Start/End: Complemental strand, 32005159 - 32004985
Alignment:
Q  66 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 165  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||| ||||| ||||||||||||| ||||||||||||||||| ||||||||||||| |    
T  32005159 ggcttaattacacttttggtcctcatgttttggcatactcacgaaactggtcatgcccttttaaaatagaacaaaacggtcctttaattatcatttttgt 32005060  T
Q  166 tgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatg 240  Q
    ||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  32005059 tgcatttttcgtcctactccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatg 32004985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 65 - 240
Target Start/End: Complemental strand, 2659386 - 2659211
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    ||||||||||||| |||||||||||| ||||||||||| ||| |||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||     
T  2659386 aggcttaattacaattttggtcctcgcgttttggcctattcatgaaactggtcttgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 2659287  T
Q  165 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatg 240  Q
    ||||||||||| |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  2659286 ttgcatttttcatcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatg 2659211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 65 - 240
Target Start/End: Complemental strand, 34534337 - 34534162
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||||||||     
T  34534337 aggcttaattatacttttggttctcgtgttttggcctactcacgaaactgatcctgcccatttaaaacagaacaaaacggtccttcaattatcatttttg 34534238  T
Q  165 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatg 240  Q
    |||||||||||||||| |||||||||||||||||||||||   |||||||||||||||||||||||||| ||||||    
T  34534237 ttgcatttttcgtcctaccccccattttattctccaaaaaaacagagaaatgacagttttagacctaccacctatg 34534162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 64 - 242
Target Start/End: Original strand, 4641438 - 4641616
Alignment:
Q  64 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 163  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||| ||||| |||||||||||| ||||||||||||||||    
T  4641438 aaggtttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgctcttttgaaacataacaaaacggtcattcaattatcattttt 4641537  T
Q  164 attgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
     |||||||||||||||| ||||||||||||||||||||||| | |||||||||| |||||||||||| |||||||||||    
T  4641538 gttgcatttttcgtcctaccccccattttattctccaaaaatgcagagaaatgatagttttagacctgccccctatgct 4641616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 72 - 235
Target Start/End: Complemental strand, 23953268 - 23953105
Alignment:
Q  72 attacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgcatt 171  Q
    |||||| |||||||||||||||||||  |||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||| |||||||    
T  23953268 attacatttttggtcctcgtgttttgatctactcacgaaactggtcccgccctttcaaaacagaacaaaacggtccttcaattatcatttttgttgcatt 23953169  T
Q  172 tttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 235  Q
    ||||||| | ||||||||||||||||||||||||| |||||||| |||||||||||| ||||||    
T  23953168 tttcgtcataccccccattttattctccaaaaacgcagagaaataacagttttagacatacccc 23953105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 65 - 226
Target Start/End: Complemental strand, 19591071 - 19590909
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  19591071 aggcttaattacacttttggtactcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 19590972  T
Q  165 ttgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 226  Q
    |||||||||||||||| || || ||||| |  ||||| ||||| |||||||||||||||||||    
T  19590971 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 19590909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 65 - 226
Target Start/End: Complemental strand, 38859187 - 38859025
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||     
T  38859187 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttccattatcatttttg 38859088  T
Q  165 ttgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 226  Q
    |||||||||||||||| || || ||||| |  ||||| ||||| |||||||||| ||||||||    
T  38859087 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgatagttttag 38859025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 69 - 235
Target Start/End: Complemental strand, 4478242 - 4478076
Alignment:
Q  69 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgc 168  Q
    |||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| || |  |||||||||||||||||||| ||||    
T  4478242 ttaagtacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaataacattgtccttcaattatcatttttgttgc 4478143  T
Q  169 atttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 235  Q
    |||||||||| |  ||| |||||||||||||||||||| |||||||| |||||||||||||||||||    
T  4478142 atttttcgtcttatccctcattttattctccaaaaacgcagagaaataacagttttagacctacccc 4478076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 65 - 225
Target Start/End: Original strand, 32004613 - 32004774
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||     
T  32004613 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattgatcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttg 32004712  T
Q  165 ttgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagtttta 225  Q
    |||||||||||| ||| || || ||||| |  ||||| ||||| ||||||||||||||||||    
T  32004713 ttgcatttttcgccctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 32004774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 65 - 204
Target Start/End: Original strand, 28583438 - 28583577
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    |||||||||||||||||||||||||||||||||||||||||| || |||||| |||||||||||||||| || ||||| |||||||||||||||||||||    
T  28583438 aggcttaattacacttttggtcctcgtgttttggcctactcatgagattggttctgcccttttaaaacataataaaactgtccttcaattatcattttta 28583537  T
Q  165 ttgcatttttcgtcctgccccccattttattctccaaaaa 204  Q
    |||||||||||||||| ||||||||||||| |||||||||    
T  28583538 ttgcatttttcgtcctaccccccattttatcctccaaaaa 28583577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 65 - 226
Target Start/End: Original strand, 2658838 - 2659000
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||     
T  2658838 aggcttaattacactttttgtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 2658937  T
Q  165 ttgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 226  Q
    |||||||||||||| | || || ||||| |  ||||||||||| ||||||||| |||||||||    
T  2658938 ttgcatttttcgtcatacctcctattttcaaactccaaaaacgcagagaaatggcagttttag 2659000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 65 - 224
Target Start/End: Complemental strand, 37787313 - 37787153
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||||| |||||||||||||| |||||||||||||||||     
T  37787313 aggcttaattatacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaatcagaacaaaacggttcttcaattatcatttttg 37787214  T
Q  165 ttgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagtttt 224  Q
    |||||||||||||||| || || ||||| |  ||||| ||||| |||||||||||||||||    
T  37787213 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttt 37787153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 65 - 206
Target Start/End: Original strand, 38160950 - 38161091
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| |  ||||||||||||||||||||||||||  ||||||||||||| ||||||     
T  38160950 aggcttaattacacttttggtcctcgggttttggcctactcacgaaaataatcctgcccttttaaaacagaacaaaattgtccttcaattattatttttg 38161049  T
Q  165 ttgcatttttcgtcctgccccccattttattctccaaaaacg 206  Q
    |||||||||||||||| | ||||||||||| |||||||||||    
T  38161050 ttgcatttttcgtcctactccccattttatcctccaaaaacg 38161091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 79 - 226
Target Start/End: Original strand, 29099863 - 29100011
Alignment:
Q  79 ttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgcatttttcgtc 178  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  29099863 ttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtc 29099962  T
Q  179 ctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 226  Q
    || || || ||||| |  | ||| ||||||||| |||||||||||||||    
T  29099963 ctacctcctattttcaaaccccagaaacgtagataaatgacagttttag 29100011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 65 - 226
Target Start/End: Original strand, 34533790 - 34533952
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||||||| |||| |||| ||||||||||||||||     
T  34533790 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaataaaatggtcattcaattatcatttttg 34533889  T
Q  165 ttgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 226  Q
    ||||||||| |||||| || || ||||| |  ||||||||||| |||||||||||| ||||||    
T  34533890 ttgcattttccgtcctacctcctattttcaaactccaaaaacgcagagaaatgacacttttag 34533952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 66 - 180
Target Start/End: Original strand, 35288903 - 35289017
Alignment:
Q  66 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 165  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| |    
T  35288903 ggcttaattacacttttggtcatcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgt 35289002  T
Q  166 tgcatttttcgtcct 180  Q
    |||||||||||||||    
T  35289003 tgcatttttcgtcct 35289017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 60 - 180
Target Start/End: Original strand, 23952724 - 23952845
Alignment:
Q  60 ttataaggcttaattacacttttggtcctcgtgttttggcc-tactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatca 158  Q
    |||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  23952724 ttattaggcttaattacacttttggtcctcgtgttttgaccctactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttcaattatca 23952823  T
Q  159 tttttattgcatttttcgtcct 180  Q
    ||||  ||||||||||||||||    
T  23952824 ttttggttgcatttttcgtcct 23952845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 64 - 226
Target Start/End: Complemental strand, 19830966 - 19830804
Alignment:
Q  64 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 163  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||| ||||||||||| |||||||||||||||||    
T  19830966 aaggcttaattacacttttggtcctcgtgttttggcctactcacaaaactggtcctgtccttttaaaacataacaaaacggtacttcaattatcattttt 19830867  T
Q  164 attgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 226  Q
     |||||||||| ||||| || || ||||| |  ||||| ||||  |||||||||||||||||||    
T  19830866 gttgcattttt-gtcctacctcctattttcaaactccagaaacacagagaaatgacagttttag 19830804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 28584466 - 28584327
Alignment:
Q  67 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttatt 166  Q
    |||||||||||||||| ||||||||| ||||||||| |||||||||||||| || ||||||||||||||||||||  |||||||||||||||||||| ||    
T  28584466 gcttaattacacttttcgtcctcgtgctttggcctattcacgaaattggtcatgtccttttaaaacagaacaaaattgtccttcaattatcatttttgtt 28584367  T
Q  167 gcatttttcgtcctgccccccattttattctccaaaaacg 206  Q
    | |||||||||| | ||||||||||||| |||||||||||    
T  28584366 gtatttttcgtcttaccccccattttatcctccaaaaacg 28584327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 69 - 226
Target Start/End: Complemental strand, 4641983 - 4641828
Alignment:
Q  69 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgc 168  Q
    |||||||||||||||||||||||||||||||||||||||   | |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  4641983 ttaattacacttttggtcctcgtgttttggcctactcac---actggtcctgtccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 4641887  T
Q  169 atttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 226  Q
    || ||||||||| |  || ||||| |  ||| | ||||| |||||||||||||||||||    
T  4641886 atatttcgtcctacgtcctattttcaaactctagaaacgcagagaaatgacagttttag 4641828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 130
Target Start/End: Complemental strand, 39137081 - 39137014
Alignment:
Q  64 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcc-cttttaaa 130  Q
    |||||||||||||||||||| ||||||| ||||| ||  ||||||||| |||||||||| ||||||||    
T  39137081 aaggcttaattacacttttgatcctcgtattttgacccgctcacgaaaatggtcctgcctcttttaaa 39137014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 63 - 121
Target Start/End: Complemental strand, 34595321 - 34595263
Alignment:
Q  63 taaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgc 121  Q
    |||||||||||||||||||||||||||   ||||| || |||||||||| |||||||||    
T  34595321 taaggcttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctgc 34595263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 119
Target Start/End: Complemental strand, 26048492 - 26048439
Alignment:
Q  66 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 119  Q
    |||||||||||||||||| |||| | |||||| || ||||||||||||||||||    
T  26048492 ggcttaattacacttttgttccttgcgttttgaccaactcacgaaattggtcct 26048439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 119
Target Start/End: Original strand, 27245203 - 27245256
Alignment:
Q  66 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 119  Q
    ||||||||||||||||||||||| |  ||||| || ||||||||||||||||||    
T  27245203 ggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcct 27245256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 141
Target Start/End: Original strand, 49064032 - 49064109
Alignment:
Q  64 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaa 141  Q
    |||||||||||||||||||||||||||| ||||| ||  ||||||||| ||||  ||||  ||| ||| |||||||||    
T  49064032 aaggcttaattacacttttggtcctcgtattttgaccagctcacgaaaatggtattgcctctttcaaatagaacaaaa 49064109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 57 - 116
Target Start/End: Complemental strand, 2758253 - 2758194
Alignment:
Q  57 taattataaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggt 116  Q
    ||||| ||||||||||||||||||||||||||||  |||||  | |||||||||| ||||    
T  2758253 taattttaaggcttaattacacttttggtcctcgcattttgttcaactcacgaaaatggt 2758194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 235
Target Start/End: Complemental strand, 32427432 - 32427397
Alignment:
Q  200 aaaaacgtagagaaatgacagttttagacctacccc 235  Q
    ||||||| ||||||||||||||||||||||||||||    
T  32427432 aaaaacgcagagaaatgacagttttagacctacccc 32427397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 119
Target Start/End: Complemental strand, 787329 - 787279
Alignment:
Q  69 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 119  Q
    ||||||||||||||||| ||||| ||||| || |||||||||| |||||||    
T  787329 ttaattacacttttggtgctcgtattttgaccaactcacgaaaatggtcct 787279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 114
Target Start/End: Complemental strand, 5746192 - 5746138
Alignment:
Q  60 ttataaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattg 114  Q
    ||||||||||||||||||||||||||||| |  ||||| |  |||||||||||||    
T  5746192 ttataaggcttaattacacttttggtccttgcattttgactaactcacgaaattg 5746138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 242
Target Start/End: Original strand, 35579028 - 35579074
Alignment:
Q  196 ctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    ||||| ||||| |||||||||||| ||||||||||| ||||||||||    
T  35579028 ctccagaaacgcagagaaatgacatttttagacctatcccctatgct 35579074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 242
Target Start/End: Complemental strand, 35579298 - 35579256
Alignment:
Q  200 aaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    ||||||| || ||||| ||||||||||||||||||||||||||    
T  35579298 aaaaacgcagggaaataacagttttagacctaccccctatgct 35579256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 119
Target Start/End: Original strand, 48247586 - 48247640
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 119  Q
    |||||||||||||||||||||||| |  |||||  | ||||||||||||||||||    
T  48247586 aggcttaattacacttttggtccttgcattttgatcaactcacgaaattggtcct 48247640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 117
Target Start/End: Original strand, 26026320 - 26026368
Alignment:
Q  69 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtc 117  Q
    |||||||||||||||||||| || ||||| ||  |||||||||||||||    
T  26026320 ttaattacacttttggtccttgtattttgaccagctcacgaaattggtc 26026368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 119
Target Start/End: Complemental strand, 39388813 - 39388761
Alignment:
Q  67 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 119  Q
    |||||||||||||||||||||| |  ||||| || |||||||||||| |||||    
T  39388813 gcttaattacacttttggtccttgcattttgaccaactcacgaaatttgtcct 39388761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 154; Significance: 9e-82; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 65 - 242
Target Start/End: Original strand, 4792 - 4969
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||     
T  4792 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 4891  T
Q  165 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  4892 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 4969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 68 - 180
Target Start/End: Complemental strand, 5334 - 5222
Alignment:
Q  68 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattg 167  Q
    ||||||||||||||||||||||||||||||||||| |||||||| ||||| || ||||||||||||||| ||||||||  |||||||||||||||| |||    
T  5334 cttaattacacttttggtcctcgtgttttggcctagtcacgaaactggtcttgtccttttaaaacagaataaaacggtaattcaattatcatttttgttg 5235  T
Q  168 catttttcgtcct 180  Q
    |||||||||||||    
T  5234 catttttcgtcct 5222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 154; Significance: 9e-82; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 65 - 242
Target Start/End: Original strand, 20741099 - 20741276
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| ||||||||||     
T  20741099 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaaatatcatttttg 20741198  T
Q  165 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  20741199 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 20741276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 66 - 242
Target Start/End: Complemental strand, 10900475 - 10900299
Alignment:
Q  66 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 165  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| |    
T  10900475 ggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 10900376  T
Q  166 tgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  10900375 tgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 10900299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 66 - 242
Target Start/End: Complemental strand, 11277127 - 11276951
Alignment:
Q  66 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 165  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| |    
T  11277127 ggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgcccttttaaaacagaacaaaacggttcttcaattatcatttttgt 11277028  T
Q  166 tgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  11277027 tgcatttttcgtcctaccccccattttattctccaaaaacgaagagaaatgacagttttagacctaccccctatgct 11276951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 65 - 242
Target Start/End: Original strand, 18257136 - 18257313
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  18257136 aggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 18257235  T
Q  165 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    |||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  18257236 ttgcatttttcgtcataccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccctctatgct 18257313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 64 - 242
Target Start/End: Complemental strand, 15828188 - 15828010
Alignment:
Q  64 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 163  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||| |||||||||||||||||||||||||||||    
T  15828188 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatacccttttaaaacaaaacaaaacggtccttcaattatcattttt 15828089  T
Q  164 attgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
     |||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  15828088 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 15828010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 65 - 242
Target Start/End: Original strand, 28472636 - 28472812
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||||||||||||| |||| ||||||||||||||||     
T  28472636 aggcttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcctgccattttaaaacagaacaaaatggtcattcaattatcatttttg 28472735  T
Q  165 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    ||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  28472736 ttgcatttttcgtcct-acccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 28472812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 65 - 242
Target Start/End: Original strand, 29859825 - 29860001
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||||||||||||| |||| ||||||||||||||||     
T  29859825 aggcttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcctgccattttaaaacagaacaaaatggtcattcaattatcatttttg 29859924  T
Q  165 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    ||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  29859925 ttgcatttttcgtcct-acccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 29860001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 65 - 240
Target Start/End: Complemental strand, 12935703 - 12935528
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| || |||||||||||||||||||||||||||||||||||||     
T  12935703 aggcttaattacacttttggtcctcgtgttttggcgtactcacgaaactggtcctgcctttataaaacagaacaaaacggtccttcaattatcatttttg 12935604  T
Q  165 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatg 240  Q
    || ||||||||||||| ||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||    
T  12935603 ttacatttttcgtcctaccccccattttattctccataaacacagagaaatgacagttttagacctaccccctatg 12935528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 67 - 242
Target Start/End: Complemental strand, 31470860 - 31470685
Alignment:
Q  67 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttatt 166  Q
    |||||||||||||||||||||| ||||||| |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| ||    
T  31470860 gcttaattacacttttggtccttgtgttttagcctactcacgaaactggttctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 31470761  T
Q  167 gcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    |||||||||||||| ||||||||||||||||||||||||| |||||||||||| ||||||| ||||||| ||||||    
T  31470760 gcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacaattttagatctaccccttatgct 31470685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 65 - 242
Target Start/End: Original strand, 11444986 - 11445163
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||| |||| |||||||||||||||||||||     
T  11444986 aggcttaattacacttttggtcctcgtgttttggcctactcacgaagctggtcctgcccctttaaaacagaataaaatggtccttcaattatcatttttg 11445085  T
Q  165 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    |||||||||||||||| ||| ||||||||||||| ||||||  |||||||||||||||||||||||||||||||||||    
T  11445086 ttgcatttttcgtcctaccctccattttattctctaaaaacacagagaaatgacagttttagacctaccccctatgct 11445163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 66 - 240
Target Start/End: Complemental strand, 1149977 - 1149802
Alignment:
Q  66 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 165  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||| ||||| ||||||||||||| ||||||||||||||||||||||| ||||||| |    
T  1149977 ggcttaattacacttttggtcctcgtgttttagcctactcatgaaactggtcatgcccttttaaaatagaacaaaacggtccttcaattaccatttttgt 1149878  T
Q  166 tgcatttttcgtcctgccccccattttattctcca-aaaacgtagagaaatgacagttttagacctaccccctatg 240  Q
    ||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  1149877 tgcatttttcgtcctaccccccattttattctccaaaaaacgcagagaaatgacagttttagacctaccccctatg 1149802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 65 - 226
Target Start/End: Original strand, 2319671 - 2319832
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||     
T  2319671 aggcttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 2319770  T
Q  165 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttag 226  Q
    |||||||||||||||| ||||||||||||||||||| ||||| |||||||||| ||||||||    
T  2319771 ttgcatttttcgtcctaccccccattttattctccagaaacgcagagaaatgatagttttag 2319832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 67 - 242
Target Start/End: Complemental strand, 18505463 - 18505288
Alignment:
Q  67 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttatt 166  Q
    ||||||||| |||||||||||||||||||||| |||||||||||| || |||||||||||||||||| |||||||| |||||||||||||||||||| ||    
T  18505463 gcttaattatacttttggtcctcgtgttttggtctactcacgaaactgatcctgcccttttaaaacataacaaaacagtccttcaattatcatttttgtt 18505364  T
Q  167 gcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    |||||||||||||| |||||||||||||||||||| |||| |||||||||||||||||| | ||| ||||||||||    
T  18505363 gcatttttcgtcctaccccccattttattctccaacaacgaagagaaatgacagttttaaatctaacccctatgct 18505288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 69 - 235
Target Start/End: Original strand, 10899942 - 10900109
Alignment:
Q  69 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgc 168  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  10899942 ttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 10900041  T
Q  169 atttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttagacctacccc 235  Q
    |||||||||||| || || ||||| |  ||||| ||||| ||||||||||||||||||||||||||||    
T  10900042 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttagacctacccc 10900109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 65 - 226
Target Start/End: Original strand, 12935156 - 12935318
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  12935156 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 12935255  T
Q  165 ttgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 226  Q
    |||||||||||||||| || || ||||| |  ||||| ||||| |||||||||||||||||||    
T  12935256 ttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacagttttag 12935318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 69 - 242
Target Start/End: Complemental strand, 2322760 - 2322588
Alignment:
Q  69 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgc 168  Q
    |||||||||||||||||| ||||||||||| |||||||||||| | ||| |||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  2322760 ttaattacacttttggtcttcgtgttttggtctactcacgaaactagtcttgcctttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 2322661  T
Q  169 atttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    |||||||||||| |||| ||||||||||||| |||||  ||||||||||||||||||||||| |||||||||||    
T  2322660 atttttcgtcctacccctcattttattctcc-aaaacacagagaaatgacagttttagaccttccccctatgct 2322588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 64 - 242
Target Start/End: Original strand, 23073997 - 23074164
Alignment:
Q  64 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 163  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||           
T  23073997 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaacggtccttcaattat------- 23074089  T
Q  164 attgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
        ||||||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||||||  |||||||    
T  23074090 ----catttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctaccttctatgct 23074164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 65 - 226
Target Start/End: Complemental strand, 11445533 - 11445371
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||     
T  11445533 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttg 11445434  T
Q  165 ttgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 226  Q
    |||||||||||||||| || || ||||| |  ||| | ||||| |||||||||||||||||||    
T  11445433 ttgcatttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttag 11445371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 65 - 226
Target Start/End: Complemental strand, 22219899 - 22219737
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  22219899 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 22219800  T
Q  165 ttgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 226  Q
    ||||||||||||| || || || ||||| |  ||||| ||||  |||||||||||||||||||    
T  22219799 ttgcatttttcgttctacctcctattttcaaactccagaaactcagagaaatgacagttttag 22219737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 65 - 226
Target Start/End: Complemental strand, 23075674 - 23075512
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||     
T  23075674 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 23075575  T
Q  165 ttgcatttttcgtcctgcccccca-ttttattctccaaaaacgtagagaaatgacagttttag 226  Q
    ||||||||||||| || || || | |||||  ||||||||| | |||||||||||||||||||    
T  23075574 ttgcatttttcgttctacctcctatttttaaactccaaaaatgcagagaaatgacagttttag 23075512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 66 - 229
Target Start/End: Original strand, 4811372 - 4811535
Alignment:
Q  66 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 165  Q
    ||||||||||||||||||||||  || |||||| |||||||||||| ||||| ||||||||||||| |||| |||||||||||||||||||||||||| |    
T  4811372 ggcttaattacacttttggtcccagtattttggtctactcacgaaactggtcatgcccttttaaaatagaataaaacggtccttcaattatcatttttgt 4811471  T
Q  166 tgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacc 229  Q
    | ||||||||||| | |||||||||||||||| |||||||| ||| |||| |||||||||||||    
T  4811472 ttcatttttcgtcttaccccccattttattcttcaaaaacgcagataaataacagttttagacc 4811535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 69 - 226
Target Start/End: Original strand, 18504922 - 18505080
Alignment:
Q  69 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgc 168  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||||| || |    
T  18504922 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggttcttcaattatcatttttgtttc 18505021  T
Q  169 atttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 226  Q
    |||||||||||| || || ||||| |  ||| | ||| |||||||||||||||||||||    
T  18505022 atttttcgtcctacctcctattttcaaactctagaaatgtagagaaatgacagttttag 18505080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 64 - 226
Target Start/End: Complemental strand, 20741651 - 20741485
Alignment:
Q  64 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcat---t 160  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||   |    
T  20741651 aaggcttaattacactcttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 20741552  T
Q  161 tttattgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 226  Q
    ||| |||||||||||||||| || || ||||| |  ||||| ||||| |||||||||||| ||||||    
T  20741551 ttttttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacaattttag 20741485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 66 - 226
Target Start/End: Complemental strand, 18257682 - 18257521
Alignment:
Q  66 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 165  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| |    
T  18257682 ggcttaattatacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattattatttttgt 18257583  T
Q  166 tgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 226  Q
    | ||||||||||||| || |  |||||    ||||| | |||||||||||||||||||||||    
T  18257582 tacatttttcgtcctacctcatattttccaactccatacacgtagagaaatgacagttttag 18257521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 31470312 - 31470476
Alignment:
Q  63 taaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 162  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||| |||||||||||||||||||| ||| ||||||||| |||||    
T  31470312 taaggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaacaaaacagtcattcaattattatttt 31470411  T
Q  163 tattgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 226  Q
    | |||||||||||||||| || || ||||| |  ||||| ||||| ||||||||| |||||||||    
T  31470412 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 31470476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 68 - 206
Target Start/End: Original strand, 29033436 - 29033575
Alignment:
Q  68 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattg 167  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| |||    
T  29033436 cttaattacacttttggtcctcgtattttggcctgctcacgaaattggtcctgcccttttaaaacagaacaaaactgtccttcagttatcatttttgttg 29033535  T
Q  168 catttttcgtcctgccccccattttatt-ctccaaaaacg 206  Q
    ||  |||| |||| ||||||||||| || |||||||||||    
T  29033536 cacatttcatcctaccccccatttttttcctccaaaaacg 29033575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 64 - 235
Target Start/End: Original strand, 11276588 - 11276760
Alignment:
Q  64 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 163  Q
    ||||||||||||||| ||| |||| |||||||||| ||||||| |||| || |||| ||||||||||||||||||||| |||||||||||| ||||||||    
T  11276588 aaggcttaattacacgtttagtccgcgtgttttggtctactcatgaaactgatcctacccttttaaaacagaacaaaatggtccttcaattgtcattttt 11276687  T
Q  164 attgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttagacctacccc 235  Q
     || ||||||||||||| || || ||||| |  ||||||||||| ||||||||||||||||||| ||||||||    
T  11276688 gtttcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcctacccc 11276760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 62 - 202
Target Start/End: Complemental strand, 3835275 - 3835135
Alignment:
Q  62 ataaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 161  Q
    |||||| |||||||||||||||||||  |||||||| ||||||||||||| ||||||||||  |||||||||||||||||  |||||| |||||||||||    
T  3835275 ataaggtttaattacacttttggtccatgtgttttgacctactcacgaaaatggtcctgcctctttaaaacagaacaaaattgtcctttaattatcattt 3835176  T
Q  162 ttattgcatttttcgtcctgccccccattttattctccaaa 202  Q
    || | |||||||||||||| ||||||||||||| |||||||    
T  3835175 ttgtggcatttttcgtcctaccccccattttatcctccaaa 3835135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 68 - 206
Target Start/End: Complemental strand, 29035180 - 29035042
Alignment:
Q  68 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattg 167  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||  |||||| | ||||||||||| |||    
T  29035180 cttaattacacttttcgtcctcgtgttttagcctactcacgaaattggttatgcccttttaaaacagaacaaaattgtcctttagttatcatttttgttg 29035081  T
Q  168 catttttcgtcctgccccccattttattctccaaaaacg 206  Q
    ||||||||||||  ||| ||||||| | |||||||||||    
T  29035080 catttttcgtcccaccctccattttttcctccaaaaacg 29035042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 65 - 154
Target Start/End: Original strand, 1149464 - 1149553
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaatt 154  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  1149464 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaatt 1149553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 65 - 206
Target Start/End: Original strand, 18296144 - 18296284
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    ||||||||||| | |||| |||||||||||||| | ||||||| |||||| |  |||||||||||||||||||||||| |||||||| |||||||||||     
T  18296144 aggcttaattataattttagtcctcgtgttttgacttactcacaaaattgatattgcccttttaaaacagaacaaaaccgtccttcatttatcatttttg 18296243  T
Q  165 ttgcatttttcgtcctgccccccattttattctccaaaaacg 206  Q
    ||||||||||||||||  |||||||||||| |||||||||||    
T  18296244 ttgcatttttcgtcct-acccccattttatcctccaaaaacg 18296284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 67 - 180
Target Start/End: Original strand, 15827639 - 15827754
Alignment:
Q  67 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaa--acggtccttcaattatcattttta 164  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||| ||| |||||||||||| ||||||  |||||||||||| ||||||||||     
T  15827639 gcttaattacacttttggtcctcgtgttttggcttactcacgaaactggttctgtccttttaaaacataacaaattacggtccttcaactatcatttttg 15827738  T
Q  165 ttgcatttttcgtcct 180  Q
    ||||||||||||||||    
T  15827739 ttgcatttttcgtcct 15827754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 66 - 175
Target Start/End: Complemental strand, 4811801 - 4811692
Alignment:
Q  66 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 165  Q
    |||||||||| ||||||| |||||||||||||||||||||| |||| || || |||  |||||||||||||||||||||||||||||||||||||||| |    
T  4811801 ggcttaattatacttttgatcctcgtgttttggcctactcatgaaactgatcatgcatttttaaaacagaacaaaacggtccttcaattatcatttttgt 4811702  T
Q  166 tgcatttttc 175  Q
    ||||||||||    
T  4811701 tgcatttttc 4811692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 122
Target Start/End: Complemental strand, 22534270 - 22534214
Alignment:
Q  66 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcc 122  Q
    |||||||||||||||||||||||||| ||||| || |||||||||| ||||||||||    
T  22534270 ggcttaattacacttttggtcctcgtattttgaccaactcacgaaaatggtcctgcc 22534214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 64 - 241
Target Start/End: Complemental strand, 35163735 - 35163557
Alignment:
Q  64 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcc-cttttaaaacagaacaaaacggtccttcaattatca-ttt 161  Q
    |||||||||||||||||||||||| ||  ||||| ||  ||||||||| |||| ||||| |||| ||| || |||||||  |||| | || |||   |||    
T  35163735 aaggcttaattacacttttggtccccgcattttgaccagctcacgaaaatggttctgcctctttcaaatca-aacaaaatcgtccctaaactatatgttt 35163637  T
Q  162 ttattgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgc 241  Q
    || ||||| |||| ||||| || || |||||   ||||||||||  ||||||||||||||||||| ||||||||||||||    
T  35163636 tttttgcagttttagtcctacctcctattttcaactccaaaaacacagagaaatgacagttttaggcctaccccctatgc 35163557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 113
Target Start/End: Complemental strand, 31574273 - 31574224
Alignment:
Q  64 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaatt 113  Q
    ||||||||||||||||||||||||| |  ||||| || ||||||||||||    
T  31574273 aaggcttaattacacttttggtccttgcattttgaccaactcacgaaatt 31574224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 113
Target Start/End: Complemental strand, 5121016 - 5120968
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaatt 113  Q
    |||||||||||||||||||||||| |  ||||| || ||||||||||||    
T  5121016 aggcttaattacacttttggtccttgcattttgaccaactcacgaaatt 5120968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 119
Target Start/End: Original strand, 30250722 - 30250774
Alignment:
Q  67 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 119  Q
    ||||||||||| |||||||||| |  ||||| || ||||||||||||||||||    
T  30250722 gcttaattacaattttggtccttgcattttgaccaactcacgaaattggtcct 30250774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 32836407 - 32836367
Alignment:
Q  202 aaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    ||||| |||||||| ||||||||||||||||||| ||||||    
T  32836407 aaacgaagagaaataacagttttagacctaccccttatgct 32836367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 154; Significance: 9e-82; HSPs: 69)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 69 - 242
Target Start/End: Original strand, 5136983 - 5137156
Alignment:
Q  69 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgc 168  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  5136983 ttaattacacttttggtcctcgtgttttggccaactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 5137082  T
Q  169 atttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  5137083 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 5137156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 66 - 242
Target Start/End: Complemental strand, 39556122 - 39555946
Alignment:
Q  66 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 165  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||  |    
T  39556122 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcattttcgt 39556023  T
Q  166 tgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  39556022 tgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 39555946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 65 - 242
Target Start/End: Complemental strand, 24301102 - 24300925
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| | ||||||||||     
T  24301102 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgccattttaaaacaaaacaaaacggtccttcgagtatcatttttg 24301003  T
Q  165 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  24301002 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 24300925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 65 - 242
Target Start/End: Complemental strand, 31779198 - 31779021
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  31779198 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 31779099  T
Q  165 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    |||||||||||||||  ||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||    
T  31779098 ttgcatttttcgtcccaccccccattttattctccaaaaacgcagagaaatgtcagttttagacgtaccccctatgct 31779021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 64 - 242
Target Start/End: Original strand, 23644460 - 23644638
Alignment:
Q  64 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 163  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  23644460 aaggcttaattacacttttggtcctcgtattttggcctactcacgaaattggtcctgccattttaaaacagaacaaaacagtccttcaattatcattttt 23644559  T
Q  164 attgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
     |||||||||||||||| ||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||    
T  23644560 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 23644638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 69 - 242
Target Start/End: Original strand, 41046703 - 41046876
Alignment:
Q  69 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgc 168  Q
    |||||||||||||||||||||||||||||||||| | |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  41046703 ttaattacacttttggtcctcgtgttttggcctaattacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 41046802  T
Q  169 atttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  41046803 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 41046876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 65 - 240
Target Start/End: Original strand, 20840559 - 20840734
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||||||||||||     
T  20840559 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaatagaacaaaacggtccttcaattatcatttttg 20840658  T
Q  165 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatg 240  Q
    |||||||||||||||| ||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||    
T  20840659 ttgcatttttcgtcctaccccccattttattctccttaaacgcagagaaatgacagttttagacctaccccctatg 20840734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 64 - 242
Target Start/End: Original strand, 37726927 - 37727105
Alignment:
Q  64 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 163  Q
    ||||||||||||||||||||||||||||||||||| || || |||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  37726927 aaggcttaattacacttttggtcctcgtgttttggtctgcttacgaaactggttctgcccttttaaaacataacaaaacggtccttcaattatcattttt 37727026  T
Q  164 attgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
     |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  37727027 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 37727105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 62 - 242
Target Start/End: Complemental strand, 27394126 - 27393946
Alignment:
Q  62 ataaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 161  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||    
T  27394126 ataaggcttaattacacttttggtcctcgtgttttggcctactcacgaaataggtcctgcctttttaaaacagaacaaaacgatccttcaattatcattt 27394027  T
Q  162 ttattgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    || ||||||||| | |||| ||||| ||||||||||||||||||| |||||||| ||||||||||||||||||| ||||||    
T  27394026 ttgttgcattttccatcctacccccaattttattctccaaaaacgcagagaaataacagttttagacctaccccatatgct 27393946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 65 - 242
Target Start/End: Original strand, 30104481 - 30104657
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || | ||||||||||||||||||||||||     
T  30104481 aggcttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgcccttttaaaacaaaatagaacggtccttcaattatcatttttg 30104580  T
Q  165 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    ||||||||||||||||  ||||||||||||| || ||||||| |||||||||||||||||||||||||||||||||||    
T  30104581 ttgcatttttcgtcct-acccccattttattatctaaaaacgcagagaaatgacagttttagacctaccccctatgct 30104657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 66 - 235
Target Start/End: Original strand, 43973441 - 43973610
Alignment:
Q  66 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 165  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| || |  ||||||||||||||||||||||||||||||||||||||||||||| |    
T  43973441 ggcttaattacacttttggtcctcgtgttttgtcctactcacgaaaatgattatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 43973540  T
Q  166 tgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 235  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||| |||| |||||||||||||||||||    
T  43973541 tgcatttttcgtcctaccccccattttattctccaaaaacgcagataaataacagttttagacctacccc 43973610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 65 - 221
Target Start/End: Original strand, 48452988 - 48453144
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    |||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||     
T  48452988 aggcttgattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttg 48453087  T
Q  165 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagt 221  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  48453088 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagt 48453144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 66 - 240
Target Start/End: Complemental strand, 32535508 - 32535330
Alignment:
Q  66 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatc-----att 160  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||     |||    
T  32535508 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattaaatt 32535409  T
Q  161 tttattgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatg 240  Q
    ||| ||||||||||||||||  |||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||    
T  32535408 tttgttgcatttttcgtcct-acccccattttattctccaaaaacgcagagaaatgatagttttagacctaacccctatg 32535330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 68 - 242
Target Start/End: Complemental strand, 25853770 - 25853596
Alignment:
Q  68 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattg 167  Q
    |||||||||||||||| |||||||||||||  |||||||||||| ||||| || | |||||||||||||||||| ||||||||||||||||||||| |||    
T  25853770 cttaattacacttttgatcctcgtgttttgctctactcacgaaactggtcttgtcattttaaaacagaacaaaatggtccttcaattatcatttttgttg 25853671  T
Q  168 catttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  25853670 catttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 25853596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 65 - 242
Target Start/End: Complemental strand, 26837901 - 26837725
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| |||| ||||||||| |||| |||||||||||||| ||||| ||||||||||     
T  26837901 aggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggttctgcccttt-aaaatagaacaaaacggtcattcaagtatcatttttg 26837803  T
Q  165 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    |||||||||| ||||| ||||||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||    
T  26837802 ttgcattttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagacttaccccctatgct 26837725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 70 - 242
Target Start/End: Complemental strand, 22425354 - 22425182
Alignment:
Q  70 taattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgca 169  Q
    |||||||||||||||||||||||||| ||||||||||||||  ||||| ||||||| ||||||||||||||||||| ||||||||||||||||| |||||    
T  22425354 taattacacttttggtcctcgtgtttcggcctactcacgaatctggtcatgcccttgtaaaacagaacaaaacggtacttcaattatcatttttgttgca 22425255  T
Q  170 tttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||| | | ||||||| ||||||||||||||    
T  22425254 tttttcgtcctaccccccattttattctccaaaaacgcagagaaattagatttttagatctaccccctatgct 22425182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 57 - 242
Target Start/End: Complemental strand, 17465046 - 17464860
Alignment:
Q  57 taattataaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattat 156  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||| || |||| |||||   ||||||||||| ||||||||||||||||||||||||    
T  17465046 taataataaggcttaattacatttttggtcctcgtgttttggcctacgcatgaaactggtctgacccttttaaaatagaacaaaacggtccttcaattat 17464947  T
Q  157 catttttattgca-tttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    ||||||| ||||| ||||| ||||| ||||||||||||||||||||||| | |||||||||||||||||||||||| ||||||||||    
T  17464946 catttttgttgcatttttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagacctaacccctatgct 17464860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 69 - 242
Target Start/End: Complemental strand, 26275108 - 26274936
Alignment:
Q  69 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgc 168  Q
    ||||||| | |||||| ||| |||||||| ||||||||||||| ||||||| |||||||||||||||| |||||||||| ||||||||||||||| ||||    
T  26275108 ttaattataattttggcccttgtgttttgacctactcacgaaactggtcctacccttttaaaacagaataaaacggtccctcaattatcatttttgttgc 26275009  T
Q  169 atttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
     ||||||||||| |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  26275008 -tttttcgtcctaccccccattttattctccaaaaccgcagagaaatgacagttttagacctaccccctatgct 26274936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 65 - 226
Target Start/End: Complemental strand, 43973986 - 43973824
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||||||     
T  43973986 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 43973887  T
Q  165 ttgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 226  Q
    |||||||||||||||| || || ||||| || | ||| ||||| |||||||||||||||||||    
T  43973886 ttgcatttttcgtcctacctcctattttcataccccagaaacgcagagaaatgacagttttag 43973824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 66 - 226
Target Start/End: Complemental strand, 37727475 - 37727314
Alignment:
Q  66 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 165  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| |    
T  37727475 ggcttaattacacttttggtcctcatgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaattatcatttttgt 37727376  T
Q  166 tgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 226  Q
    ||||||||||||||| || || ||||| |  ||||| ||||| |||||||||||||||||||    
T  37727375 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 37727314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 27393658 - 27393822
Alignment:
Q  63 taaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 162  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  27393658 taaggcttaattacacttttggtcctcgtgttttgacctactcacaaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttt 27393757  T
Q  163 tattgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 226  Q
    | |||||||||||||||| ||||| ||||| |  | ||| ||||| |||||||||||||||||||    
T  27393758 tgttgcatttttcgtcctaccccctattttcaaaccccagaaacgcagagaaatgacagttttag 27393822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 60 - 226
Target Start/End: Original strand, 17464485 - 17464652
Alignment:
Q  60 ttataaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcat 159  Q
    |||| |||||||||||||||||||||||||||||||||||||| || ||||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  17464485 ttattaggcttaattacacttttggtcctcgtgttttggcctattcgcgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcat 17464584  T
Q  160 ttttattgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 226  Q
    |||| |||||||||||||||| || || ||||| |  ||||| ||||||| |||||||||||||||||    
T  17464585 ttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgtaaagaaatgacagttttag 17464652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 64 - 226
Target Start/End: Complemental strand, 20841108 - 20840945
Alignment:
Q  64 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 163  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  20841108 aaggcttaattacacttttggtgctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcattttt 20841009  T
Q  164 attgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 226  Q
     |||||||||||||||| || || ||||| |  ||||| ||||| ||||||||| |||||||||    
T  20841008 gttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatggcagttttag 20840945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 64 - 226
Target Start/End: Original strand, 39555576 - 39555739
Alignment:
Q  64 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 163  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  39555576 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaatggtccttcaattatcattttt 39555675  T
Q  164 attgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 226  Q
     ||||||||||||| || || || ||||| |  ||||| ||||| |||||||||||||||||||    
T  39555676 gttgcatttttcgttctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 39555739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 69 - 206
Target Start/End: Complemental strand, 25612519 - 25612382
Alignment:
Q  69 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgc 168  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||| || ||||||||||||| ||||    
T  25612519 ttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgcccttttaaaatagaacaaaactgtcttttaattatcatttttgttgc 25612420  T
Q  169 atttttcgtcctgccccccattttattctccaaaaacg 206  Q
    |||||||||||| ||||||||||||| |||||||||||    
T  25612419 atttttcgtcctaccccccattttatcctccaaaaacg 25612382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 66 - 226
Target Start/End: Original strand, 25853234 - 25853395
Alignment:
Q  66 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 165  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| |    
T  25853234 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcatgcccttttaaaatagaacaaaacggtccttcaattatcatttttgt 25853333  T
Q  166 tgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 226  Q
    |||||||||||| || || || ||||| |  ||||| ||||| |||||||| ||||||||||    
T  25853334 tgcatttttcgttctacctcctattttcaaactccagaaacgcagagaaataacagttttag 25853395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 64 - 226
Target Start/End: Original strand, 31778651 - 31778814
Alignment:
Q  64 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 163  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  31778651 aaggcttaattacacttttggtcctcgtgttttggtctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcgtttatcattttt 31778750  T
Q  164 attgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 226  Q
     |||||||||||||||| || || ||||| |  ||||| ||||| |||||||||||||||||||    
T  31778751 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 31778814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 65 - 226
Target Start/End: Complemental strand, 4275910 - 4275748
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||| |||||||||||||     
T  4275910 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaacaaaacggtcctttaattatcatttttg 4275811  T
Q  165 ttgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 226  Q
    |||||||||||||||| || || ||||| |  ||||| ||||| ||||||||| |||||||||    
T  4275810 ttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatggcagttttag 4275748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 65 - 228
Target Start/End: Complemental strand, 29801962 - 29801798
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||     
T  29801962 aggcttaattacacttttgatcctcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttg 29801863  T
Q  165 ttgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttagac 228  Q
    |||||||||||||||  || || ||||| |  ||||| ||||| |||||||||||| ||||||||    
T  29801862 ttgcatttttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacaattttagac 29801798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 64 - 180
Target Start/End: Original strand, 32534957 - 32535073
Alignment:
Q  64 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 163  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  32534957 aaggtttaattacacttttggtcctcgtgttttggcatactcacgaaattggtcctgcctttttaaaacagaacaaaacggtccttcaattatcattttt 32535056  T
Q  164 attgcatttttcgtcct 180  Q
     ||||||||||||||||    
T  32535057 gttgcatttttcgtcct 32535073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 66 - 226
Target Start/End: Complemental strand, 23645010 - 23644849
Alignment:
Q  66 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 165  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| |    
T  23645010 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaattggtcctacccttttaaaacagaacaaaacggtcattcaattatcatttttgt 23644911  T
Q  166 tgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 226  Q
    |||||||||| |||| || || ||||| |  ||| |  |||| |||||||||||||||||||    
T  23644910 tgcatttttcatcctacctcctattttcaaactctagtaacgcagagaaatgacagttttag 23644849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 62 - 226
Target Start/End: Complemental strand, 30098312 - 30098147
Alignment:
Q  62 ataaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 161  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  30098312 ataaggcttaattacacttttggtcctcgtgttttgacatactcacgaaactggtcttgcccttttaaaacagaacaaaatggtccttcaattatcattt 30098213  T
Q  162 ttattgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 226  Q
    || |||||||||||||||| || || ||||| |  || || ||||| ||||| |||||||||||||    
T  30098212 ttgttgcatttttcgtcctacctcctattttcaaacttcagaaacgcagagatatgacagttttag 30098147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 66 - 205
Target Start/End: Complemental strand, 23228552 - 23228414
Alignment:
Q  66 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 165  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| || || |||||||||||||| ||||||||  ||||||||||||||||||||||    
T  23228552 ggcttaattacacttttggtccccgtgttttggcctactcacgaaaatgatcatgcccttttaaaac-gaacaaaattgtccttcaattatcatttttat 23228454  T
Q  166 tgcatttttcgtcctgccccccattttattctccaaaaac 205  Q
    ||||||||||||||| || |||||||||| ||||||||||    
T  23228453 tgcatttttcgtcctacctcccattttatcctccaaaaac 23228414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 65 - 226
Target Start/End: Complemental strand, 5137527 - 5137365
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| |||| |||||||||||||| ||||||||| |||||||||||||||||||||     
T  5137527 aggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggttctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 5137428  T
Q  165 ttgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 226  Q
    |||||||||| |||||  | || ||||| |  ||||| ||||| |||||||||||||||||||    
T  5137427 ttgcatttttagtcctatctcctattttcaaactccagaaacgcagagaaatgacagttttag 5137365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 69 - 226
Target Start/End: Original strand, 26837363 - 26837521
Alignment:
Q  69 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgc 168  Q
    ||||||||| |||||||||| || |||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||| ||||    
T  26837363 ttaattacatttttggtccttgtattttggcctactcacgaaattggtcctgcccttttataacataacgaaacggtccttcaattatcatttttgttgc 26837462  T
Q  169 atttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 226  Q
    |||||||||||| || || ||||| |  ||||| ||||| |||||||||||||||||||    
T  26837463 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 26837521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 65 - 226
Target Start/End: Original strand, 22424813 - 22424975
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    ||||||||||||||||||||| |||||||||  ||||||| |||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||||     
T  22424813 aggcttaattacacttttggttctcgtgtttaagcctacttacgaaactggttctgtccttttaaaacagaacaaaacggtccttcaattatcatttttg 22424912  T
Q  165 ttgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 226  Q
    |||||||||||||||| || || ||||| |  ||||| ||| | |||||||||||||||||||    
T  22424913 ttgcatttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagttttag 22424975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 61 - 187
Target Start/End: Original strand, 29801351 - 29801477
Alignment:
Q  61 tataaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 160  Q
    |||| ||||||||||||||||||||| |||||||||||| ||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||    
T  29801351 tatatggcttaattacacttttggtcatcgtgttttggcatactcacaaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcatt 29801450  T
Q  161 tttattgcatttttcgtcctgcccccc 187  Q
    ||| |||||||||||||| | ||||||    
T  29801451 tttgttgcatttttcgtcttacccccc 29801477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 66 - 206
Target Start/End: Complemental strand, 50116954 - 50116814
Alignment:
Q  66 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 165  Q
    |||||||||||||||||| ||||||||||||| | ||||||||||||||||| ||||||||| ||| |||||||||||||| |||| ||||||||||| |    
T  50116954 ggcttaattacacttttgatcctcgtgttttgacttactcacgaaattggtcatgcccttttgaaagagaacaaaacggtcattcagttatcatttttgt 50116855  T
Q  166 tgcatttttcgtcctgccccccattttattctccaaaaacg 206  Q
    |||| |||||||||| ||||||||||| | |||||||||||    
T  50116854 tgcaattttcgtcctaccccccattttttcctccaaaaacg 50116814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 67 - 207
Target Start/End: Complemental strand, 32697244 - 32697105
Alignment:
Q  67 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttatt 166  Q
    ||||||||| | |||||||||||||||||| |||||||||||||||| |||  ||||||||||||||||||||||  || ||||||||||||||||| ||    
T  32697244 gcttaattatatttttggtcctcgtgttttagcctactcacgaaattagtcacgcccttttaaaacagaacaaaattgtgcttcaattatcatttttgtt 32697145  T
Q  167 gcatttttcgtcctgccccccattttattctccaaaaacgt 207  Q
    ||||||||||||||  |||||||||||| ||||||||||||    
T  32697144 gcatttttcgtcct-acccccattttatcctccaaaaacgt 32697105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 64 - 226
Target Start/End: Original strand, 26274565 - 26274728
Alignment:
Q  64 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 163  Q
    |||| ||||||||| ||||| |||| || |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26274565 aaggtttaattacatttttgatccttgtattttggactactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 26274664  T
Q  164 attgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 226  Q
     |||||||||||||| | || || ||||| |  ||||| ||||| ||  |||||||||||||||    
T  26274665 gttgcatttttcgtcatacctcctattttcaaactccagaaacgcagttaaatgacagttttag 26274728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 65 - 206
Target Start/End: Complemental strand, 51474880 - 51474738
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    ||||||||||||||||||||| | ||||||||||| ||||||||||||||||| ||||||||||||||| |||||||  |||||| | |||||||||||     
T  51474880 aggcttaattacacttttggttcccgtgttttggcatactcacgaaattggtcatgcccttttaaaacataacaaaattgtcctttagttatcatttttg 51474781  T
Q  165 ttgcatttttcgtcctgcccccca-ttttattctccaaaaacg 206  Q
    |||||||||||||||| ||||| | |||||| |||||||||||    
T  51474780 ttgcatttttcgtcctacccccaatttttatcctccaaaaacg 51474738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 65 - 206
Target Start/End: Original strand, 37220556 - 37220697
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    ||||||||||||||||||||||||||| ||||||||||||||| | || | || ||| |||||||||||||| ||||  |||||||| |||||||||||     
T  37220556 aggcttaattacacttttggtcctcgtattttggcctactcacaatatcgatcatgctcttttaaaacagaataaaattgtccttcagttatcatttttg 37220655  T
Q  165 ttgcatttttcgtcctgccccccattttattctccaaaaacg 206  Q
    ||||| |||||||||| ||| ||||||||| |||||||||||    
T  37220656 ttgcacttttcgtcctaccctccattttatcctccaaaaacg 37220697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 67 - 180
Target Start/End: Original strand, 51473429 - 51473542
Alignment:
Q  67 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttatt 166  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||  |||||||  ||||||||||| ||    
T  51473429 gcttaattacacttttggtcctcgtgttttggtctattcacgaaattggtcctgcccttttaaaacagaacaaaattgtccttcggttatcatttttgtt 51473528  T
Q  167 gcatttttcgtcct 180  Q
    ||| |||| |||||    
T  51473529 gcacttttggtcct 51473542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 64 - 226
Target Start/End: Original strand, 24300555 - 24300717
Alignment:
Q  64 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 163  Q
    |||| ||||||||| |||||||| |||||||||||| || |||||||| |||||||| ||||||||||||||| |||||||| |||||||||||||||||    
T  24300555 aaggtttaattacatttttggtc-tcgtgttttggcttattcacgaaactggtcctgtccttttaaaacagaataaaacggttcttcaattatcattttt 24300653  T
Q  164 attgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 226  Q
     ||||| |||||||||  || || ||||| |  ||||| ||||| |||||||||||||||||||    
T  24300654 gttgcaattttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacagttttag 24300717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 65 - 204
Target Start/End: Original strand, 45965937 - 45966076
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| ||  |||||| ||||||||||| |||||||  ||||||| |||||||||| |     
T  45965937 aggcttaattacacttttggtcctcgtgttttggcatactcacgaagttaatcctgctcttttaaaacataacaaaaatgtccttcgattatcatttgtg 45966036  T
Q  165 ttgcatttttcgtcctgccccccattttattctccaaaaa 204  Q
    ||||||||||||| ||  |||||||||| | |||||||||    
T  45966037 ttgcatttttcgttctaacccccattttctcctccaaaaa 45966076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 64 - 226
Target Start/End: Complemental strand, 41047244 - 41047083
Alignment:
Q  64 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 163  Q
    |||| ||||||||||||| | || || ||||||||||||||||||||| |||| ||| ||||||||||||||| ||||| ||||||||||||||||||||    
T  41047244 aaggtttaattacactttcg-tcttcatgttttggcctactcacgaaactggttctgtccttttaaaacagaataaaac-gtccttcaattatcattttt 41047147  T
Q  164 attgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 226  Q
     |||||||||||||||| || || ||||| |  ||||| ||||| ||||||||| |||||||||    
T  41047146 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 41047083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 68 - 204
Target Start/End: Complemental strand, 25420684 - 25420548
Alignment:
Q  68 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattg 167  Q
    |||||||||||||||| || |||| ||||| |||||||||||||||| ||  |||||||||||| |||| ||||  ||||||||||||| |||||| |||    
T  25420684 cttaattacacttttgatcatcgtattttgacctactcacgaaattgatcacgcccttttaaaatagaataaaattgtccttcaattattatttttgttg 25420585  T
Q  168 catttttcgtcctgccccccattttattctccaaaaa 204  Q
    ||||||||||| | ||||||||||||| || ||||||    
T  25420584 catttttcgtcataccccccattttatccttcaaaaa 25420548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 65 - 152
Target Start/End: Complemental strand, 37222117 - 37222030
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaa 152  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||||  ||||||||    
T  37222117 aggcttaattacacttttggtcctcgtgttttgccctactcacaaaattggtcctgccattttaaaacagaacaaaaccatccttcaa 37222030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 25419145 - 25419284
Alignment:
Q  67 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtcc-ttcaattatca-ttttta 164  Q
    |||| |||| |||||||||| ||||||||| || ||||||||||||| || ||||||||||||||||||||||||| |||| ||||||||||| |||||     
T  25419145 gcttgattatacttttggtcttcgtgttttagcttactcacgaaattagttctgcccttttaaaacagaacaaaactgtcctttcaattatcattttttt 25419244  T
Q  165 ttgcatttttcgtcctgccccccattttattctccaaaaacg 206  Q
    ||||| |||| |||||  |||||||||||  |||||||||||    
T  25419245 ttgcagttttagtccttacccccatttta--ctccaaaaacg 25419284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 85 - 194
Target Start/End: Complemental strand, 18010271 - 18010162
Alignment:
Q  85 tcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgcatttttcgtcctgccc 184  Q
    ||||| |||||| | |||||||||||| |||| | ||||||||||||||||||||||  ||  |||||||||||||||| ||||||||||||||||||||    
T  18010271 tcctcctgttttcgtctactcacgaaaatggttccgcccttttaaaacagaacaaaattgttattcaattatcatttttgttgcatttttcgtcctgccc 18010172  T
Q  185 cccattttat 194  Q
     |||||||||    
T  18010171 tccattttat 18010162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 63 - 206
Target Start/End: Original strand, 23227259 - 23227396
Alignment:
Q  63 taaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 162  Q
    ||||||| ||||| ||||||||||   |||||||||| ||||||||||| |||||||       | ||||||||||||   ||||| ||||| |||||||    
T  23227259 taaggctcaattagacttttggtctctgtgttttggcttactcacgaaaatggtcctc------tgaaacagaacaaatttgtcctccaattttcatttt 23227352  T
Q  163 tattgcatttttcgtcctgccccccattttattctccaaaaacg 206  Q
    | |||||||||||||||| | ||||||||||| |||||||||||    
T  23227353 tgttgcatttttcgtccttctccccattttatcctccaaaaacg 23227396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 65 - 243
Target Start/End: Original strand, 49407795 - 49407972
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    ||||||||||||||||||||||||||  ||||| ||  ||||||||| ||||| ||||  ||| ||| |||||||||| |||| | || | | || |||     
T  49407795 aggcttaattacacttttggtcctcgcattttgaccagctcacgaaaatggtcatgcctctttcaaatagaacaaaaccgtccctaaacttt-atgtttt 49407893  T
Q  165 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgcta 243  Q
     | || |||| ||| | || || |||||   ||||||||||| |||||||||||| |||||||||||||||||||||||    
T  49407894 gtacagttttagtcatacctcctattttcaactccaaaaacgcagagaaatgacaattttagacctaccccctatgcta 49407972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 69 - 193
Target Start/End: Original strand, 32695706 - 32695830
Alignment:
Q  69 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgc 168  Q
    ||||||||| ||||||||||| | |||||||||||| ||||||||| |  || | ||||||||||||||||||  ||||| | ||||| |||||| ||||    
T  32695706 ttaattacatttttggtcctcatattttggcctacttacgaaattgattatgtctttttaaaacagaacaaaattgtcctacgattattatttttgttgc 32695805  T
Q  169 atttttcgtcctgccccccatttta 193  Q
    | |||| |||||  ||| |||||||    
T  32695806 aattttagtccttaccctcatttta 32695830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 65 - 242
Target Start/End: Complemental strand, 27200238 - 27200062
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    |||||||||||||||||||||||| |  ||||| ||  ||||||||| |||| |||||  ||| |||  |||||| || |||||  || |||||| |||     
T  27200238 aggcttaattacacttttggtccttgcattttgaccagctcacgaaaatggttctgcctctttcaaatcgaacaataccgtccta-aactatcatgtttt 27200140  T
Q  165 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    ||||| |||| ||| | || || |||||   ||||| ||||| ||||||||||||| |||||||||||||| ||||||    
T  27200139 ttgcagttttagtcatacctcctattttcaactccagaaacgcagagaaatgacaggtttagacctaccccttatgct 27200062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 196 - 242
Target Start/End: Original strand, 55192247 - 55192293
Alignment:
Q  196 ctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||    
T  55192247 ctccagaaacgcagagaaatgacagttttagacctaccccctatgct 55192293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 182 - 242
Target Start/End: Original strand, 29801532 - 29801592
Alignment:
Q  182 ccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    |||||||||||||||| |||||| | ||||||||||||||||||||| |||| | ||||||    
T  29801532 ccccccattttattcttcaaaaatgcagagaaatgacagttttagacatacctcatatgct 29801592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 64 - 242
Target Start/End: Original strand, 51827955 - 51828133
Alignment:
Q  64 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct-gcccttttaaaacagaacaaaacggtccttcaattatcatttt 162  Q
    ||||||||||||||||||||||||| |  ||||| || |||||||||||||||||| || |||||||| | ||||||||  |||| | || ||| || ||    
T  51827955 aaggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctagctcttttaaatc-gaacaaaatcgtccctaaactat-atgtt 51828052  T
Q  163 tattgcatttttcgtcct-gccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    | |||||||||| |||||  | ||| |||||   ||||| ||||| | | ||||||||||||||| || ||| ||||||||    
T  51828053 ttttgcatttttagtcctatctccctattttcaactccagaaacgcacataaatgacagttttagtccaaccacctatgct 51828133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 242
Target Start/End: Original strand, 37075687 - 37075864
Alignment:
Q  67 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcc-cttttaaaacagaacaaaacggtccttcaattatca--ttttt 163  Q
    ||||||||||||||||||||  ||  ||||| || |||||||||| |||||||||| |||| ||| || |||||| | |||| | || |||    |||||    
T  37075687 gcttaattacacttttggtctccgcattttgaccaactcacgaaaatggtcctgcctctttcaaatca-aacaaacccgtccctaaactatatgtttttt 37075785  T
Q  164 attgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
     ||||| |||| ||||| || |  |||||   ||||| ||||| ||||||||||| |||||||||||||||||||||||    
T  37075786 tttgcagttttagtcctacctcttattttcaactccagaaacgcagagaaatgaccgttttagacctaccccctatgct 37075864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 65 - 119
Target Start/End: Complemental strand, 52375878 - 52375824
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 119  Q
    ||||||||||||||||||||||||||  ||||| || |||||||||| |||||||    
T  52375878 aggcttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcct 52375824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 60 - 117
Target Start/End: Complemental strand, 49720913 - 49720856
Alignment:
Q  60 ttataaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtc 117  Q
    |||||||||||||||||||||||||||||  | ||||| || |||||||||| |||||    
T  49720913 ttataaggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtc 49720856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 242
Target Start/End: Complemental strand, 50901074 - 50900898
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    ||||||||||||||||||||||||||  ||||| ||  ||||| ||| ||| ||||||  ||  |||  ||||||||| |||| | || ||| || |||     
T  50901074 aggcttaattacacttttggtcctcgcattttgaccagctcacaaaaatggccctgcctcttacaaatcgaacaaaaccgtccctaaactat-atgtttt 50900976  T
Q  165 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    ||||| |||| ||||| || || |||||   ||||| ||||| | ||||||  |||||||||| ||||||||||||||    
T  50900975 ttgcagtttttgtcctacctcctattttcaactccataaacgcaaagaaattgcagttttagatctaccccctatgct 50900898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 22370599 - 22370671
Alignment:
Q  69 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaa 141  Q
    ||||||||||||||||||||||  ||||| || |||||||||| ||||||| || |||| ||||  |||||||    
T  22370599 ttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcctaccttttttaaaccaaacaaaa 22370671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 119
Target Start/End: Complemental strand, 330384 - 330329
Alignment:
Q  64 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 119  Q
    ||||||||||||||| |||||||||||  ||||| || |||||||||| |||||||    
T  330384 aaggcttaattacacatttggtcctcgcattttgaccaactcacgaaaatggtcct 330329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 115
Target Start/End: Complemental strand, 14654737 - 14654686
Alignment:
Q  64 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattgg 115  Q
    ||||||||||||||||||||||||| |  ||||| || ||||||||||||||    
T  14654737 aaggcttaattacacttttggtccttgcattttgaccaactcacgaaattgg 14654686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 97
Target Start/End: Original strand, 25611494 - 25611529
Alignment:
Q  62 ataaggcttaattacacttttggtcctcgtgttttg 97  Q
    |||||||||||||||||||||| |||||||||||||    
T  25611494 ataaggcttaattacacttttgatcctcgtgttttg 25611529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 119
Target Start/End: Complemental strand, 41998776 - 41998721
Alignment:
Q  64 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 119  Q
    ||||||||||||||||||||||||| |  ||||| || ||| ||||||||||||||    
T  41998776 aaggcttaattacacttttggtccttgcattttgaccaacttacgaaattggtcct 41998721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 119
Target Start/End: Original strand, 49720370 - 49720424
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 119  Q
    ||||||||||||||||||| |||| |  ||||| || ||||||||||||||||||    
T  49720370 aggcttaattacacttttgatccttgcattttgaccaactcacgaaattggtcct 49720424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 119
Target Start/End: Original strand, 40275093 - 40275146
Alignment:
Q  66 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 119  Q
    ||||||||||||||||||||||||   ||||| || |||||||||| |||||||    
T  40275093 ggcttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcct 40275146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 117
Target Start/End: Original strand, 46013420 - 46013473
Alignment:
Q  64 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtc 117  Q
    |||||||||||||||||||| |||| |  ||||| || ||||||||||||||||    
T  46013420 aaggcttaattacacttttgatccttgcattttgaccaactcacgaaattggtc 46013473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 152; Significance: 1e-80; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 69 - 240
Target Start/End: Original strand, 11090524 - 11090695
Alignment:
Q  69 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgc 168  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  11090524 ttaattacacttttggtcctcgtgttttggcctactcacgaaacttgtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 11090623  T
Q  169 atttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatg 240  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  11090624 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatg 11090695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 63 - 242
Target Start/End: Original strand, 40027137 - 40027316
Alignment:
Q  63 taaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 162  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  40027137 taaggcttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttt 40027236  T
Q  163 tattgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    | |||||||||| ||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  40027237 tgttgcattttttgtcctaccctccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 40027316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 60 - 242
Target Start/End: Original strand, 239347 - 239528
Alignment:
Q  60 ttataaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcat 159  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  239347 ttattaggcttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgcc-ttttaaaacagaacaaaacggtccttcaattatcat 239445  T
Q  160 ttttattgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  239446 ttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctatcccctatgct 239528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 65 - 242
Target Start/End: Original strand, 1978107 - 1978284
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  1978107 aggcttaattacatttttggtccttgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 1978206  T
Q  165 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    |||||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  1978207 ttgcattttttgtcctgtcccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccatatgct 1978284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 61 - 242
Target Start/End: Original strand, 43058328 - 43058509
Alignment:
Q  61 tataaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 160  Q
    |||| |||||||||||||||||| |||||||||||||||| |||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  43058328 tatatggcttaattacacttttgatcctcgtgttttggccaactcactaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatt 43058427  T
Q  161 tttattgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    ||| ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43058428 tttgttgcatttttcgttctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 43058509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 65 - 242
Target Start/End: Complemental strand, 18451377 - 18451200
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||  ||||||||| ||||||||||     
T  18451377 aggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaatagtccttcaaatatcatttttg 18451278  T
Q  165 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    ||||||||||| |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  18451277 ttgcatttttcttcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 18451200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 65 - 242
Target Start/End: Original strand, 22374319 - 22374496
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||     
T  22374319 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 22374418  T
Q  165 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    |||||||||||||||| ||||||||||||||||||||||||| | |||||||| ||||||||||||| || |||||||    
T  22374419 ttgcatttttcgtcctaccccccattttattctccaaaaacgcaaagaaatgatagttttagacctaacctctatgct 22374496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 69 - 242
Target Start/End: Complemental strand, 40815887 - 40815714
Alignment:
Q  69 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgc 168  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  40815887 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtaatgcccttttaaaacagaacaaaacggcccttcaattatcatttttgttgc 40815788  T
Q  169 atttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  40815787 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccctctatgct 40815714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 63 - 242
Target Start/End: Original strand, 26538094 - 26538273
Alignment:
Q  63 taaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 162  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  26538094 taaggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggttctgcccttttaaaacagaacaaagcggtccttcaattatcatttt 26538193  T
Q  163 tattgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    | |||||||||||||||| ||||||||||||||||||||||||  |||||||| ||||||||||||||| || |||||||    
T  26538194 tgttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaataacagttttagacctatcctctatgct 26538273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 66 - 240
Target Start/End: Original strand, 28616613 - 28616788
Alignment:
Q  66 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 165  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| |    
T  28616613 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 28616712  T
Q  166 tgcatttttcgtcctgccccccattttattctcc-aaaaacgtagagaaatgacagttttagacctaccccctatg 240  Q
    |||| |||||||||| |||||||||||||| ||| ||||||| ||||||||  |||||||||||||||||||||||    
T  28616713 tgcaattttcgtcctaccccccattttattatccaaaaaacgcagagaaatagcagttttagacctaccccctatg 28616788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 69 - 239
Target Start/End: Original strand, 14432145 - 14432315
Alignment:
Q  69 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgc 168  Q
    |||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||||| | |||||||||||||||||| |||||||||| ||||    
T  14432145 ttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcttgcccttttaaaatataacaaaacggtccttcaactatcatttttgttgc 14432244  T
Q  169 atttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctat 239  Q
    |||||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  14432245 atttttggtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctat 14432315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 65 - 235
Target Start/End: Complemental strand, 26538625 - 26538454
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||     
T  26538625 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccctcttaaaacagaacaaaacggtccttcaattatcatttttg 26538526  T
Q  165 ttgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttagacctacccc 235  Q
    |||||||||||||||| ||||||||||| |  | ||| ||||| ||||||||||||||||||||||||||||    
T  26538525 ttgcatttttcgtcctaccccccattttcaaaccccagaaacgcagagaaatgacagttttagacctacccc 26538454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 72 - 242
Target Start/End: Original strand, 3025472 - 3025641
Alignment:
Q  72 attacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgcatt 171  Q
    |||||| ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||    
T  3025472 attacatttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaagtatcatttttgttgcatt 3025571  T
Q  172 tttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    |||||||||  |||||||||||||||| ||||||| | |||||||||||||||||||||||||||||||||    
T  3025572 tttcgtcct-acccccattttattctcaaaaaacgcaaagaaatgacagttttagacctaccccctatgct 3025641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 69 - 235
Target Start/End: Complemental strand, 8425902 - 8425736
Alignment:
Q  69 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgc 168  Q
    ||||||||||||||||| || ||||||||| |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||    
T  8425902 ttaattacacttttggttcttgtgttttggtctactcacgaaattggtcctgcccttttaaaatagaacaaaactgtccttcaattatcatttttgttgc 8425803  T
Q  169 atttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctacccc 235  Q
    |||||||||| | ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  8425802 atttttcgtcttacccccaattttattctccaaaaacgcagagaaatgacagttttagacctacccc 8425736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 64 - 240
Target Start/End: Original strand, 7446340 - 7446519
Alignment:
Q  64 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 163  Q
    |||||||||||||||||||| |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  7446340 aaggcttaattacacttttgatcctcgtgttttggtctactcatgaaattggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 7446439  T
Q  164 attgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacag----ttttagacctaccccctatg 240  Q
    ||||||||||||||| |  |||||||||||||||||||||||| |||||||||||||    |||||||| |||||||||||    
T  7446440 attgcatttttcgtcat-acccccattttattctccaaaaacgcagagaaatgacagttaattttagacataccccctatg 7446519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 64 - 206
Target Start/End: Original strand, 20444747 - 20444889
Alignment:
Q  64 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 163  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  20444747 aaggcttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcagttatcattttt 20444846  T
Q  164 attgcatttttcgtcctgccccccattttattctccaaaaacg 206  Q
     ||||| |||||||||| ||||||||||||| |||||||||||    
T  20444847 gttgcagttttcgtcctaccccccattttatcctccaaaaacg 20444889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 64 - 226
Target Start/End: Original strand, 18450828 - 18450991
Alignment:
Q  64 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 163  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  18450828 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtccagcccttttaaaacagaacaaaacggtccttcaattatcattttt 18450927  T
Q  164 attgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 226  Q
     |||||||||| ||||| || || ||||| |  ||||| ||||| |||||||||||||||||||    
T  18450928 tttgcatttttagtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 18450991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 65 - 226
Target Start/End: Complemental strand, 22374871 - 22374709
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||     
T  22374871 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 22374772  T
Q  165 ttgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 226  Q
    |||||||||||||||| || || ||||| |  ||| | ||| | |||||||||||||||||||    
T  22374771 ttgcatttttcgtcctacctcctattttcaaactctagaaatgcagagaaatgacagttttag 22374709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 64 - 226
Target Start/End: Complemental strand, 40027687 - 40027524
Alignment:
Q  64 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 163  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  40027687 aaggtttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtctttcaattatcattttt 40027588  T
Q  164 attgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 226  Q
     |||||||||||||||| || || ||||| |  ||||| ||||| || |||||| |||||||||    
T  40027587 gttgcatttttcgtcctacctcctattttcaaactccataaacgcagtgaaatggcagttttag 40027524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 65 - 226
Target Start/End: Complemental strand, 7446892 - 7446730
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    ||||||||||||| ||||| ||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  7446892 aggcttaattacatttttgatcctcgtgttttgccttactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 7446793  T
Q  165 ttgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 226  Q
    |||||||||||||||| || || ||||| |  ||||||||||| |||||||||||||||||||    
T  7446792 ttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 7446730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 35781207 - 35781068
Alignment:
Q  67 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttatt 166  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||  ||||||||||||||||||| ||    
T  35781207 gcttaattacacttttgatcctcgtgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaactatccttcaattatcatttttgtt 35781108  T
Q  167 gcatttttcgtcctgccccccattttattctccaaaaacg 206  Q
    ||||||||||||||  |||||||||||| |||||||||||    
T  35781107 gcatttttcgtcctaacccccattttatcctccaaaaacg 35781068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 68 - 226
Target Start/End: Original strand, 40815347 - 40815506
Alignment:
Q  68 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattg 167  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||| ||||||||||||||||| |||    
T  40815347 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacataacaaaacggttcttcaattatcatttttgttg 40815446  T
Q  168 catttttcgtcctgcccccca-ttttattctccaaaaacgtagagaaatgacagttttag 226  Q
    ||||||||||||| || || | |||||  ||||| ||||| |||||||||||||||||||    
T  40815447 catttttcgtcctacctcctatttttaaactccagaaacgcagagaaatgacagttttag 40815506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 67 - 226
Target Start/End: Complemental strand, 239896 - 239736
Alignment:
Q  67 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttatt 166  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||    
T  239896 gcttagttacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtt 239797  T
Q  167 gcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 226  Q
    || ||||||||| | || || ||||| |  ||||| ||||| ||||||||| |||||||||    
T  239796 gcgtttttcgtcatacctcctattttcaaactccagaaacgcagagaaatggcagttttag 239736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 66 - 206
Target Start/End: Original strand, 35779708 - 35779848
Alignment:
Q  66 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 165  Q
    |||||||||||||||||||||||||||||||| | ||||||||||| |||||||||| ||||||||||||||||||  |||||||||||||||||||| |    
T  35779708 ggcttaattacacttttggtcctcgtgttttgacatactcacgaaaatggtcctgccattttaaaacagaacaaaattgtccttcaattatcatttttgt 35779807  T
Q  166 tgcatttttcgtcctgccccccattttattctccaaaaacg 206  Q
    ||||||||| ||||| ||||||||||||| |||||||||||    
T  35779808 tgcattttttgtcctaccccccattttatcctccaaaaacg 35779848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 65 - 180
Target Start/End: Complemental strand, 1978655 - 1978540
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||     
T  1978655 aggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacagtccttcaattatcatttttg 1978556  T
Q  165 ttgcatttttcgtcct 180  Q
    |||||||||| |||||    
T  1978555 ttgcattttttgtcct 1978540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 65 - 206
Target Start/End: Complemental strand, 20440577 - 20440437
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |||| |||||||||||     
T  20440577 aggcttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcagttatcatttttg 20440478  T
Q  165 ttgcatttttcgtcctgccccccattttattctccaaaaacg 206  Q
    ||||| ||||||||||  |||||| ||||| |||||||||||    
T  20440477 ttgcagttttcgtcctatccccca-tttatcctccaaaaacg 20440437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 65 - 180
Target Start/End: Complemental strand, 11091066 - 11090951
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| ||     
T  11091066 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattattg 11090967  T
Q  165 ttgcatttttcgtcct 180  Q
    ||| ||||||||||||    
T  11090966 ttgtatttttcgtcct 11090951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 64 - 226
Target Start/End: Complemental strand, 28617161 - 28616998
Alignment:
Q  64 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 163  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||||||| |||||||||||||||||||||    
T  28617161 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctgtccttttaaaacagaacaaaatggtccttcaattatcattttt 28617062  T
Q  164 attgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 226  Q
     |||||||||||||| | || || ||||| |  ||||| ||||| ||||||||  |||||||||    
T  28617061 gttgcatttttcgtcttacctcctattttcaaactccagaaacgcagagaaatagcagttttag 28616998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 65 - 226
Target Start/End: Complemental strand, 43058878 - 43058717
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||||||||||||| ||||     
T  43058878 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaatggtccttcaattatca-ttttg 43058780  T
Q  165 ttgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 226  Q
    |||||||||||||||| || || ||||| |  ||||| ||||| ||||||||| |||||||||    
T  43058779 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 43058717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 65 - 180
Target Start/End: Complemental strand, 28847241 - 28847126
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||     
T  28847241 aggcttaattacatttttggtcctcgtgttttggtctactcacgaaactggtcctgctcttttaaaacaaaacaaaacggtccttcaattatcatttttg 28847142  T
Q  165 ttgcatttttcgtcct 180  Q
    ||||||||||||||||    
T  28847141 ttgcatttttcgtcct 28847126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 66 - 225
Target Start/End: Complemental strand, 3026006 - 3025848
Alignment:
Q  66 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 165  Q
    |||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||| |||||| |    
T  3026006 ggcttaattaca-ttttggtcctcgtgttttggcttactcacgaaattggttctgcccttttaaaaca-aacaaaacggtccttcaattattatttttgt 3025909  T
Q  166 tgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagtttta 225  Q
    ||||||||||||||| || || ||||| |  ||||| ||| | ||||||||||||||||||    
T  3025908 tgcatttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagtttta 3025848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 68 - 206
Target Start/End: Original strand, 8972239 - 8972377
Alignment:
Q  68 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattg 167  Q
    |||||||||||||||||||||||||||||||| | ||||||||| ||||| |||||||| ||||||||||||||  ||| |||||||||||||||| |||    
T  8972239 cttaattacacttttggtcctcgtgttttggcatgctcacgaaaatggtcatgccctttcaaaacagaacaaaattgtcattcaattatcatttttgttg 8972338  T
Q  168 catttttcgtcctgccccccattttattctccaaaaacg 206  Q
    |||||||||| || ||||| ||||||| |||||||||||    
T  8972339 catttttcgttctaccccctattttatcctccaaaaacg 8972377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 69 - 225
Target Start/End: Original strand, 8425358 - 8425514
Alignment:
Q  69 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgc 168  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| | || |||||||||||||||||||||| ||||||||||||||| | ||||    
T  8425358 ttaattacacttttggtccttgtgttttggcctactcacgaaattggtcttacctttttaaaacagaacaaaacggt-cttcaattatcatttgtgttgc 8425456  T
Q  169 atttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagtttta 225  Q
    |||||||||||| || || ||||| |  ||||| ||| | ||||||||||||||||||    
T  8425457 atttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagtttta 8425514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 68 - 206
Target Start/End: Original strand, 15551501 - 15551639
Alignment:
Q  68 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattg 167  Q
    |||||||||||||||||||||||||||||||  ||||||||||| ||||| |||| |||||||||| |||||||  |||||||| ||||||||||| |||    
T  15551501 cttaattacacttttggtcctcgtgttttggtttactcacgaaaatggtcatgcctttttaaaacaaaacaaaaatgtccttcagttatcatttttgttg 15551600  T
Q  168 catttttcgtcctgccccccattttattctccaaaaacg 206  Q
    ||||||||||||  ||| ||||||||| |||||||||||    
T  15551601 catttttcgtccaaccctccattttatcctccaaaaacg 15551639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 68 - 226
Target Start/End: Complemental strand, 14432684 - 14432525
Alignment:
Q  68 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattg 167  Q
    |||||||||| |||||||||||||||||||||||||||| |||| ||||| |||| ||||||||||||| |||| ||| |||||||||| |||||| |||    
T  14432684 cttaattacatttttggtcctcgtgttttggcctactcatgaaactggtcatgccattttaaaacagaataaaatggttcttcaattattatttttgttg 14432585  T
Q  168 catttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 226  Q
    |||||||| |||| || || ||||| |  ||| | ||||| |||||||||||||||||||    
T  14432584 catttttcatcctacctcctattttcaaactctagaaacgcagagaaatgacagttttag 14432525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 68 - 207
Target Start/End: Complemental strand, 15552596 - 15552458
Alignment:
Q  68 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattg 167  Q
    ||||||||||||||||||| |  ||||||||||||||||||||| || ||| ||||||||||||||||||||||  ||| |||||||||||||||| |||    
T  15552596 cttaattacacttttggtcataatgttttggcctactcacgaaaatgatcc-gcccttttaaaacagaacaaaattgtcattcaattatcatttttgttg 15552498  T
Q  168 catttttcgtcctgccccccattttattctccaaaaacgt 207  Q
     |||||||||||| ||| |||||||   ||||||||||||    
T  15552497 tatttttcgtcctaccctccattttgccctccaaaaacgt 15552458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 60 - 242
Target Start/End: Complemental strand, 28143581 - 28143400
Alignment:
Q  60 ttataaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcat 159  Q
    |||| |||||||||| |||||||||||||||  ||||| ||  ||||||||| ||||||||||  ||| |||  ||||||||  |||| | || ||||||    
T  28143581 ttattaggcttaatttcacttttggtcctcgcattttgaccagctcacgaaaatggtcctgcctctttcaaatcgaacaaaatcgtccctaaactatcat 28143482  T
Q  160 ttttattgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
     ||| ||||| |||| ||||| |  || |||||   ||||| ||||| |||||||||||||||||||||||||||||||||||    
T  28143481 gttt-ttgcagttttagtcctacgtcctattttcaactccagaaacgcagagaaatgacagttttagacctaccccctatgct 28143400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 64 - 208
Target Start/End: Complemental strand, 3824256 - 3824112
Alignment:
Q  64 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 163  Q
    |||| ||||||| |||||||||| |||  ||||  || |||||||||||||||| ||||||||| |||  ||||||||| || | |    |||||| |||    
T  3824256 aaggtttaattatacttttggtcatcgcattttaaccaactcacgaaattggtcatgccctttttaaatcgaacaaaacagttcatatgctatcatgttt 3824157  T
Q  164 attgcatttttcgtcctgccccccattttattctccaaaaacgta 208  Q
     ||||| |||| || ||  |||||||||||| |||||||||||||    
T  3824156 tttgcaattttagttctaacccccattttatcctccaaaaacgta 3824112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 140
Target Start/End: Original strand, 3822924 - 3822995
Alignment:
Q  69 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaa 140  Q
    ||||||||||||||||||||||  ||||  || ||||| ||||||| |||||||||||| |||| |||||||    
T  3822924 ttaattacacttttggtcctcgcattttaaccaactcatgaaattgatcctgccctttttaaaccgaacaaa 3822995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 117
Target Start/End: Original strand, 4355755 - 4355806
Alignment:
Q  66 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtc 117  Q
    ||||||||||||||||||||||| |  ||||| |||||||||||||||||||    
T  4355755 ggcttaattacacttttggtccttgcattttgacctactcacgaaattggtc 4355806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 119
Target Start/End: Complemental strand, 42192791 - 42192736
Alignment:
Q  64 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 119  Q
    |||||||||||||||||||||||||||  ||||| || |||||||||| |||||||    
T  42192791 aaggcttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcct 42192736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 65 - 119
Target Start/End: Complemental strand, 25336147 - 25336093
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 119  Q
    |||||||||||||||||||||||| |  ||||| || ||||||||||||||||||    
T  25336147 aggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcct 25336093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 65 - 119
Target Start/End: Original strand, 38007949 - 38008003
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 119  Q
    |||||||||||||||||||||||| |  ||||| || ||||||||||||||||||    
T  38007949 aggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcct 38008003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 65 - 119
Target Start/End: Complemental strand, 43216256 - 43216202
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 119  Q
    |||||||||||||||||| ||||| | |||||| || ||||||||||||||||||    
T  43216256 aggcttaattacacttttagtccttgcgttttgaccaactcacgaaattggtcct 43216202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 119
Target Start/End: Complemental strand, 6949990 - 6949937
Alignment:
Q  66 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 119  Q
    ||||||||||||||||||||||| |  ||||| || ||||||||||||||||||    
T  6949990 ggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcct 6949937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 224
Target Start/End: Complemental strand, 31797325 - 31797166
Alignment:
Q  64 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 163  Q
    ||||||||||||||||||||||||||   ||||| ||  ||||||||| ||||| ||||  ||| |||  ||||||||| |||| | || ||| || |||    
T  31797325 aaggcttaattacacttttggtcctcacattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgtccctaaactat-atgttt 31797227  T
Q  164 attgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagtttt 224  Q
     ||||| |||| ||||| || || |||||   ||| | ||||| |||||||||||||||||    
T  31797226 tttgcagttttagtcctacctcctattttcaactctagaaacgcagagaaatgacagtttt 31797166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 119
Target Start/End: Original strand, 32418156 - 32418212
Alignment:
Q  63 taaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 119  Q
    |||||||||||||||||| ||||||| |  ||||| || ||||||||||||||||||    
T  32418156 taaggcttaattacacttatggtccttgcattttgaccaactcacgaaattggtcct 32418212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 119
Target Start/End: Complemental strand, 20128284 - 20128230
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 119  Q
    |||||||||||||||||||||||| |  ||||  || ||||||||||||||||||    
T  20128284 aggcttaattacacttttggtccttgcatttttaccaactcacgaaattggtcct 20128230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 119
Target Start/End: Original strand, 42192240 - 42192293
Alignment:
Q  66 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 119  Q
    ||||||||||||||||||||||||   ||||| || |||||||||| |||||||    
T  42192240 ggcttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcct 42192293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 117
Target Start/End: Complemental strand, 44220193 - 44220140
Alignment:
Q  64 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtc 117  Q
    ||||||||||||||||||| |||||||  ||||| || |||||||||| |||||    
T  44220193 aaggcttaattacactttttgtcctcgcattttgaccaactcacgaaaatggtc 44220140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 141
Target Start/End: Original strand, 62956 - 63032
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaa 141  Q
    |||||||||||||||| |||||||    ||||| || |||||||||| ||||||| || ||||||||  ||||||||    
T  62956 aggcttaattacacttatggtccttccattttgaccaactcacgaaaatggtcctacctttttaaaatcgaacaaaa 63032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 127
Target Start/End: Original strand, 9747518 - 9747582
Alignment:
Q  63 taaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgccctttt 127  Q
    |||||||||||| |||||||| ||||||  ||||| | | |||||||||||||| ||||| ||||    
T  9747518 taaggcttaattgcacttttgatcctcgcattttgacatgctcacgaaattggttctgccttttt 9747582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 119
Target Start/End: Complemental strand, 16953479 - 16953427
Alignment:
Q  67 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 119  Q
    |||||||||||||||||||||| |  ||||| || ||||| ||||||||||||    
T  16953479 gcttaattacacttttggtccttgcattttgaccaactcatgaaattggtcct 16953427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 150; Significance: 2e-79; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 65 - 242
Target Start/End: Complemental strand, 19176836 - 19176659
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    |||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  19176836 aggcttaattacacttttggtcctcgtgttttggcctactcacgtaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 19176737  T
Q  165 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||||||||    
T  19176736 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagacaaatgacagttttagacctaccacctatgct 19176659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 65 - 242
Target Start/End: Original strand, 12571862 - 12572040
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||| || |||||||||||||||||||||||||| ||||||||||||||||     
T  12571862 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctacccttttaaaacagaacaaaacggtcattcaattatcatttttg 12571961  T
Q  165 ttgcatttttcgtcct-gccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    ||||||||||||||||  ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  12571962 ttgcatttttcgtcctaaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 12572040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 65 - 239
Target Start/End: Original strand, 41681133 - 41681306
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  41681133 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 41681232  T
Q  165 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctat 239  Q
    ||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||| || ||||||||||    
T  41681233 ttgcatttttcgtcct-acccccattttattctccaaaaacgcagagaaatgacagttttaaacataccccctat 41681306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 64 - 242
Target Start/End: Complemental strand, 9930204 - 9930026
Alignment:
Q  64 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 163  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||||||| |||||||||| ||||||||||    
T  9930204 aaggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtccttcaactatcattttt 9930105  T
Q  164 attgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
     |||||||||||||||| |||||||||||||||||||||| || |||||||||| ||||||||||||||||||||||||    
T  9930104 gttgcatttttcgtcctaccccccattttattctccaaaagcgcagagaaatgatagttttagacctaccccctatgct 9930026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 65 - 242
Target Start/End: Original strand, 31133219 - 31133396
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||| |||||||| ||||||||| ||||||||||     
T  31133219 aggcttaattacacttttggtcctcgtgttttgccctactcacgaaactggtcccgcccttttaaaacaaaacaaaacagtccttcaagtatcatttttg 31133318  T
Q  165 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  31133319 ttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacctcttatgct 31133396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 64 - 242
Target Start/End: Original strand, 33328156 - 33328334
Alignment:
Q  64 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 163  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||||||||||||||||| ||||||||||    
T  33328156 aaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaacagaacaaaacggtccttcaagtatcattttt 33328255  T
Q  164 attgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
     |||||||||||||||| ||| | ||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  33328256 gttgcatttttcgtcctaccctcgattttattctccaaaaacgcaaagaaatgacagttttagacctaccccctatgct 33328334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 65 - 242
Target Start/End: Complemental strand, 44831791 - 44831614
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||  ||||||||||||||||     
T  44831791 aggcttaataacacttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggttattcaattatcatttttg 44831692  T
Q  165 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    |||||||||| ||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  44831691 ttgcatttttggtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 44831614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 65 - 240
Target Start/End: Original strand, 11656454 - 11656630
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||| |||||||     
T  11656454 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaactgaacaaaacggtccttcaattaccatttttg 11656553  T
Q  165 ttgcatttttcgtcctgccccccattttattctcc-aaaaacgtagagaaatgacagttttagacctaccccctatg 240  Q
    |||||||||||||||| |||||||||||||||||| ||||||| ||||||||| |||||||||||||||||| ||||    
T  11656554 ttgcatttttcgtcctaccccccattttattctccaaaaaacgcagagaaatggcagttttagacctaccccttatg 11656630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 70 - 242
Target Start/End: Original strand, 13224645 - 13224816
Alignment:
Q  70 taattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgca 169  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||  ||||||||||||||||||| ||| |    
T  13224645 taattacacttttggtcttcgtgttttggcctactcacgaaactggtc-tgcccttttaaaacagaacaaaacaatccttcaattatcatttttgttgaa 13224743  T
Q  170 tttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  13224744 tttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 13224816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 66 - 242
Target Start/End: Complemental strand, 9178180 - 9178005
Alignment:
Q  66 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 165  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || || |||||| ||||||||||||||||||||||||||| |||||||||| |    
T  9178180 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgccctcttaaaacagaacaaaacggtccttcaagtatcatttttgt 9178081  T
Q  166 tgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    |||||||||| | ||  |||||||||||||||| ||||||| |||||||||||| ||||||||||||| ||||||||    
T  9178080 tgcatttttcat-cttacccccattttattctcaaaaaacgcagagaaatgacaattttagacctacctcctatgct 9178005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 57 - 226
Target Start/End: Original strand, 44831238 - 44831408
Alignment:
Q  57 taattataaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattat 156  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  44831238 taattttaaggcttaattacacttttggtcctcatgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttccattat 44831337  T
Q  157 catttttattgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 226  Q
    ||||||| |||||||||||||||| || || ||||| |  ||||| ||||| |||||||||| ||||||||    
T  44831338 catttttgttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatgatagttttag 44831408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 64 - 226
Target Start/End: Complemental strand, 13225186 - 13225023
Alignment:
Q  64 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 163  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  13225186 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcattttt 13225087  T
Q  164 attgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 226  Q
     |||||||||||||||| || || ||||| |  ||||| ||||| ||||||||| |||||||||    
T  13225086 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 13225023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 65 - 226
Target Start/End: Original strand, 19176289 - 19176451
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||     
T  19176289 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 19176388  T
Q  165 ttgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 226  Q
    |||||||||||||||  || || ||||| |  ||||| ||||| |||||||||||| ||||||    
T  19176389 ttgcatttttcgtccgacctcctattttcaaactccagaaacgcagagaaatgacaattttag 19176451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 69 - 242
Target Start/End: Complemental strand, 4630328 - 4630161
Alignment:
Q  69 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgc 168  Q
    ||||||||||||||| || ||||||||||| ||||||||||||||||||||||  ||||||||||||| | |||||||||||||||||      | ||||    
T  4630328 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgcatttttaaaacagaatacaacggtccttcaattat------tgttgc 4630235  T
Q  169 atttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    ||||||| |||| ||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  4630234 atttttcatcctaccccccattttattctccaaaaacgcagaaaaatgacagttttagacctaccccctatgct 4630161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 64 - 226
Target Start/End: Complemental strand, 11657004 - 11656841
Alignment:
Q  64 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 163  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| | |||||||||||||||||||| |||||||||||||||||||||    
T  11657004 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcccggccttttaaaacagaacaaaatggtccttcaattatcattttt 11656905  T
Q  164 attgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 226  Q
     |||||||||||||||| || || ||||| |  ||||| ||||| ||||||||  |||||||||    
T  11656904 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatagcagttttag 11656841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 69 - 226
Target Start/End: Original strand, 9928912 - 9929070
Alignment:
Q  69 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgc 168  Q
    |||||||||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  9928912 ttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 9929011  T
Q  169 atttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 226  Q
    |||||||||||| || ||  |||| |  ||||| ||||| ||||||||| |||||||||    
T  9929012 atttttcgtcctacctccttttttcaaactccagaaacgcagagaaatgtcagttttag 9929070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 66 - 180
Target Start/End: Complemental strand, 41681679 - 41681565
Alignment:
Q  66 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 165  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |    
T  41681679 ggcttaattacacttttggtcctcgtgttttggcctaatcacgaaactggtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgt 41681580  T
Q  166 tgcatttttcgtcct 180  Q
    |||||||||||||||    
T  41681579 tgcatttttcgtcct 41681565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 67 - 178
Target Start/End: Complemental strand, 31133764 - 31133653
Alignment:
Q  67 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttatt 166  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| |||||| ||    
T  31133764 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattattatttttgtt 31133665  T
Q  167 gcatttttcgtc 178  Q
    ||||||||||||    
T  31133664 gcatttttcgtc 31133653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 65 - 180
Target Start/End: Complemental strand, 34541094 - 34540979
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||| |||||||||||||||||||||     
T  34541094 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacataacaaaatggtccttcaattatcatttttg 34540995  T
Q  165 ttgcatttttcgtcct 180  Q
    ||||||||||||||||    
T  34540994 ttgcatttttcgtcct 34540979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 65 - 226
Target Start/End: Original strand, 33742921 - 33743082
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||| |||||||| ||||||||||||||||     
T  33742921 aggcttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcttgcccttttaaaacagaac-aaacggtctttcaattatcatttttg 33743019  T
Q  165 ttgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 226  Q
     ||||||||||||||| || || ||||| || | ||| ||||| |||||||||||||||||||    
T  33743020 atgcatttttcgtcctacctcctattttcataccccagaaacgcagagaaatgacagttttag 33743082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 112 - 240
Target Start/End: Complemental strand, 33743418 - 33743290
Alignment:
Q  112 ttggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgcatttttcgtcctgccccccattttattctccaaaaacgtagag 211  Q
    ||||| ||||| ||||||||||||||||||||||  |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||||    
T  33743418 ttggttctgcctttttaaaacagaacaaaacggtttttcaattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagag 33743319  T
Q  212 aaatgacagttttagacctaccccctatg 240  Q
    |||| |||||||||||||||| |||||||    
T  33743318 aaataacagttttagacctactccctatg 33743290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 69 - 226
Target Start/End: Complemental strand, 12572393 - 12572235
Alignment:
Q  69 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgc 168  Q
    |||||||||||||||||||||||||||||| |||||||||||| | ||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  12572393 ttaattacacttttggtcctcgtgttttggtctactcacgaaactagtcatgctcttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 12572294  T
Q  169 atttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 226  Q
    |||||||||||| || || ||||| |  ||||| ||||| ||||||||  |||||||||    
T  12572293 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaattgcagttttag 12572235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 68 - 226
Target Start/End: Complemental strand, 33328683 - 33328524
Alignment:
Q  68 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattg 167  Q
    |||||||| |||||||||||||||||||| |||||||||||||| | ||| ||| ||||||||||| ||||||||||||||||||||||||||||| |||    
T  33328683 cttaattagacttttggtcctcgtgttttagcctactcacgaaactagtcatgctcttttaaaacataacaaaacggtccttcaattatcatttttgttg 33328584  T
Q  168 catttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 226  Q
    ||||||||||||  || |||||||| |  ||||| ||||| ||||||||| |||||||||    
T  33328583 catttttcgtcccacctcccattttcaaactccagaaacgcagagaaatggcagttttag 33328524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 65 - 174
Target Start/End: Complemental strand, 11337068 - 11336959
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    |||||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||     
T  11337068 aggcttaattacacttttggtcttcgtgttttggcttactcacgaaattggtcccgcccttttaaaacagaataaaacggtctttcaattatcatttttg 11336969  T
Q  165 ttgcattttt 174  Q
    ||||||||||    
T  11336968 ttgcattttt 11336959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 65 - 178
Target Start/End: Original strand, 4629796 - 4629909
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    |||||||||| |||||||  | ||||||||||||| || |||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  4629796 aggcttaattgcacttttaattctcgtgttttggcatattcacgaaactggtcctgcccttttaaaatagaacaaaacggtcattcaattatcattttta 4629895  T
Q  165 ttgcatttttcgtc 178  Q
    ||||||||||||||    
T  4629896 ttgcatttttcgtc 4629909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 69 - 204
Target Start/End: Original strand, 10918129 - 10918264
Alignment:
Q  69 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgc 168  Q
    ||||||||| |||| ||||||||||||||  |||||||||||||||||| ||||   |||||||||| |||||  ||||||||| |||||||||| ||||    
T  10918129 ttaattacattttttgtcctcgtgttttgatctactcacgaaattggtcttgcctccttaaaacagagcaaaattgtccttcaaatatcatttttgttgc 10918228  T
Q  169 atttttcgtcctgccccccattttattctccaaaaa 204  Q
    ||||||| || | ||||||||||||| |||||||||    
T  10918229 atttttcatcataccccccattttatcctccaaaaa 10918264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 64 - 206
Target Start/End: Complemental strand, 8074098 - 8073957
Alignment:
Q  64 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 163  Q
    |||||||| ||| |||||||||||||||||||||||||| |||||||| || || || ||||||||||||||||||||   |||||||||||||| ||||    
T  8074098 aaggcttagttatacttttggtcctcgtgttttggcctattcacgaaaatgatcatgtccttttaaaacagaacaaaatcatccttcaattatca-tttt 8074000  T
Q  164 attgcatttttcgtcctgccccccattttattctccaaaaacg 206  Q
     ||||||||| ||||    |||||||||||  |||||||||||    
T  8073999 gttgcattttacgtcaaaacccccattttaccctccaaaaacg 8073957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 145 - 206
Target Start/End: Original strand, 43958264 - 43958325
Alignment:
Q  145 tccttcaattatcatttttattgcatttttcgtcctgccccccattttattctccaaaaacg 206  Q
    ||||||||||||||||||| |||||||||||||||| ||| | |||||||||||||||||||    
T  43958264 tccttcaattatcatttttgttgcatttttcgtcctaccctctattttattctccaaaaacg 43958325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 106
Target Start/End: Complemental strand, 10919734 - 10919691
Alignment:
Q  63 taaggcttaattacacttttggtcctcgtgttttggcctactca 106  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||    
T  10919734 taaggcttaattatacttttggtcctcgtgttttgacctactca 10919691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 65 - 99
Target Start/End: Original strand, 9177666 - 9177700
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggc 99  Q
    |||||||||||||||||||||||||||||||||||    
T  9177666 aggcttaattacacttttggtcctcgtgttttggc 9177700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 65 - 119
Target Start/End: Original strand, 15255852 - 15255906
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 119  Q
    |||||||||||||||||||||||| |  ||||| || ||||||||||||||||||    
T  15255852 aggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcct 15255906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 119
Target Start/End: Complemental strand, 28254971 - 28254919
Alignment:
Q  67 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 119  Q
    |||||||||||||||||||||| |  ||||| || ||||||||||||||||||    
T  28254971 gcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcct 28254919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 141
Target Start/End: Complemental strand, 35427359 - 35427283
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaa 141  Q
    ||||||||||||||||||||||||||  ||||| || |||||||||| |||| || ||  ||| |||| ||||||||    
T  35427359 aggcttaattacacttttggtcctcgcattttgaccaactcacgaaaatggttctacctcttttaaaccgaacaaaa 35427283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 117
Target Start/End: Original strand, 599529 - 599583
Alignment:
Q  63 taaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtc 117  Q
    ||||||||||||||| |||||||||| |  ||||| || ||||||||||||||||    
T  599529 taaggcttaattacatttttggtccttgcattttgaccaactcacgaaattggtc 599583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 119
Target Start/End: Complemental strand, 6115658 - 6115604
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 119  Q
    ||||||||||| |||||||||||| || ||||| || |||| |||||||||||||    
T  6115658 aggcttaattatacttttggtccttgtattttgaccaactcgcgaaattggtcct 6115604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 242
Target Start/End: Complemental strand, 28877437 - 28877260
Alignment:
Q  64 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 163  Q
    |||| ||||||||||||||||||||||  ||||| || |||||||||| ||||  | ||  ||| |||  ||||||||  |||| | || |||||| |||    
T  28877437 aaggtttaattacacttttggtcctcgcattttgaccaactcacgaaaatggttatacctctttcaaattgaacaaaattgtccct-aactatcatgttt 28877339  T
Q  164 attgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
     ||||  |||| ||||| ||  | |||||   ||||| ||||||| | |||||||| ||||||||||||| ||||||||    
T  28877338 tttgctgttttagtcctaccttctatttttaactccagaaacgtatataaatgacaattttagacctacctcctatgct 28877260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 114
Target Start/End: Original strand, 43958211 - 43958257
Alignment:
Q  68 cttaattacacttttggtcctcgtgttttggcctactcacgaaattg 114  Q
    |||||||| |||||||||| ||||||||||  |||||||||||||||    
T  43958211 cttaattatacttttggtcttcgtgttttgatctactcacgaaattg 43958257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 119
Target Start/End: Original strand, 9796726 - 9796779
Alignment:
Q  66 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 119  Q
    ||||||||||||||||||||||| |  ||||| || |||||| |||||||||||    
T  9796726 ggcttaattacacttttggtccttgcattttgaccaactcacaaaattggtcct 9796779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 241
Target Start/End: Original strand, 18805304 - 18805337
Alignment:
Q  208 agagaaatgacagttttagacctaccccctatgc 241  Q
    ||||||||||||||||||||| ||||||||||||    
T  18805304 agagaaatgacagttttagacttaccccctatgc 18805337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951 (Bit Score: 148; Significance: 3e-78; HSPs: 2)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 65 - 240
Target Start/End: Original strand, 1666 - 1841
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||     
T  1666 aggcttaattacacttttggtcctcctgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatgttccttcaattatcatttttg 1765  T
Q  165 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatg 240  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  1766 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatg 1841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 65 - 226
Target Start/End: Complemental strand, 2213 - 2051
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||     
T  2213 aggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 2114  T
Q  165 ttgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttag 226  Q
    |||||||||||||||| || || ||||| |  ||||| ||||| |||||||||| ||||||||    
T  2113 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgaaagttttag 2051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 146; Significance: 5e-77; HSPs: 2)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 65 - 242
Target Start/End: Complemental strand, 4753 - 4576
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||     
T  4753 aggcttaattacacttttggtcttcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcctttaattatcatttttg 4654  T
Q  165 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    |||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  4653 ttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 4576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 105 - 226
Target Start/End: Original strand, 4242 - 4364
Alignment:
Q  105 cacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgcatttttcgtcctgccccccatttt-attctccaaaa 203  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| || || || ||||| |  ||| ||||    
T  4242 cacgaaactggtcctgcccttttaaaacaaaacaaaacggtccttcaattatcatttttgttgcatttttcgttctacctcctattttcaaactctaaaa 4341  T
Q  204 acgtagagaaatgacagttttag 226  Q
    | | |||||||||||||||||||    
T  4342 atgcagagaaatgacagttttag 4364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 144; Significance: 8e-76; HSPs: 4)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 63 - 242
Target Start/End: Original strand, 64299 - 64478
Alignment:
Q  63 taaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 162  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||    
T  64299 taaggcttaattacacttttggtcctcgtgttttgacatactcacgaaactgatcctgaccttttaaaacagaacaaaacggtccttcaattatcatttt 64398  T
Q  163 tattgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    | |||||||||||||| | ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  64399 tgttgcatttttcgtcataccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 64478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 64 - 180
Target Start/End: Complemental strand, 64852 - 64736
Alignment:
Q  64 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 163  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||||| |||||||||||||    
T  64852 aaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcccgcccttttaaaacagaacaaaacggtcctttaattatcattttt 64753  T
Q  164 attgcatttttcgtcct 180  Q
     ||||||||||||||||    
T  64752 gttgcatttttcgtcct 64736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 63 - 242
Target Start/End: Complemental strand, 205916 - 205738
Alignment:
Q  63 taaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 162  Q
    |||| ||||||||||||||| ||||||   ||||| || |||||||||| ||||||||||  ||| |||  ||||||||| |||| | || |||||| ||    
T  205916 taagtcttaattacacttttagtcctcacattttgaccaactcacgaaaatggtcctgcctctttcaaatcgaacaaaaccgtccctaaactatcatgtt 205817  T
Q  163 tattgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    | ||||| |||| ||||| |  || |||||   ||||||||||| ||||||||| |||||||||||||||||||||||||    
T  205816 t-ttgcagttttagtcctacgtcctattttcaactccaaaaacgcagagaaatggcagttttagacctaccccctatgct 205738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 63 - 163
Target Start/End: Complemental strand, 210886 - 210786
Alignment:
Q  63 taaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 162  Q
    |||||||||||||||||||||||||||   ||||| || ||||| |||| ||||||||||  ||| |||  ||||||||| |||| | || |||||||||    
T  210886 taaggcttaattacacttttggtcctcacattttgaccaactcatgaaaatggtcctgcctctttcaaatcgaacaaaaccgtccctaaactatcatttt 210787  T
Q  163 t 163  Q
    |    
T  210786 t 210786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 142; Significance: 1e-74; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 65 - 242
Target Start/End: Complemental strand, 134219 - 134042
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||| ||||||||||||| ||||||||||| |||||||     
T  134219 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcatgcccttttaatacagaacaaaacgatccttcaattaacatttttg 134120  T
Q  165 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  134119 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 134042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223 (Bit Score: 131; Significance: 5e-68; HSPs: 2)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 68 - 242
Target Start/End: Original strand, 755 - 928
Alignment:
Q  68 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattg 167  Q
    ||||||||||||||||||| |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| |||| |||    
T  755 cttaattacacttttggtcttcgtgttttggcctactcacgatactggtcctgcccttttaaaacagaacaaaacggtccttcaattatca-ttttgttg 853  T
Q  168 catttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||| |||||| ||||||    
T  854 catttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacataccccttatgct 928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 66 - 235
Target Start/End: Complemental strand, 1286 - 1116
Alignment:
Q  66 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 165  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  1286 ggcttaattacacttttagtcctcgtgttttggcttactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 1187  T
Q  166 tgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttagacctacccc 235  Q
    ||||| ||||||||| || || ||||| |  | ||| ||||| ||| ||||| |||||||||||| |||||    
T  1186 tgcatctttcgtcctacctcctattttcaaaccccagaaacgcagaaaaatggcagttttagacccacccc 1116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 123; Significance: 3e-63; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 65 - 242
Target Start/End: Complemental strand, 42704 - 42528
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttta 164  Q
    ||||||||||| |||||||| ||||||||||||| ||||||| |||| || | |||||||||||||||||||||||||||||||||| |||||||||||     
T  42704 aggcttaattatacttttggncctcgtgttttggtctactcaggaaactgattctgcccttttaaaacagaacaaaacggtccttcagttatcatttttg 42605  T
Q  165 ttgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    || |||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  42604 tttcatttttcgtcct-acccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 42528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 61 - 235
Target Start/End: Original strand, 42164 - 42339
Alignment:
Q  61 tataaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 160  Q
    ||||||| |||||||||||||| || |||||||||||| ||| |||||||| || ||||||| ||||||||||||||||||||||| |||||||||||||    
T  42164 tataaggtttaattacacttttagttctcgtgttttggtctaatcacgaaactgatcctgccattttaaaacagaacaaaacggtcattcaattatcatt 42263  T
Q  161 tttattgcatttttcgtcctgccccccatttt-attctccaaaaacgtagagaaatgacagttttagacctacccc 235  Q
    ||| |||||||||| ||| | || || ||||| |  || || ||||| ||||||||||||||||||||||||||||    
T  42264 tttgttgcattttttgtcatacctcctattttcaaacttcagaaacgcagagaaatgacagttttagacctacccc 42339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 122; Significance: 1e-62; HSPs: 2)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 69 - 242
Target Start/End: Complemental strand, 10414 - 10242
Alignment:
Q  69 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgc 168  Q
    |||||||||||||||||||||||||||||| |||||||||||| ||||  | ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  10414 ttaattacacttttggtcctcgtgttttggtctactcacgaaactggtgtttcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 10315  T
Q  169 atttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
    ||||||||||||  ||||||||||||||||||||||   |||||||||||||||||| ||||||||||||||||    
T  10314 atttttcgtcct-acccccattttattctccaaaaattcagagaaatgacagttttaaacctaccccctatgct 10242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 69 - 173
Target Start/End: Original strand, 9935 - 10039
Alignment:
Q  69 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgc 168  Q
    ||||||||| |||||||||||||||||| ||||| |||||||| || || ||||||||||| | ||||||||| |||||||||||||||| |||| || |    
T  9935 ttaattacatttttggtcctcgtgttttagcctattcacgaaactgatcttgcccttttaagatagaacaaaatggtccttcaattatcaattttgttac 10034  T
Q  169 atttt 173  Q
    |||||    
T  10035 atttt 10039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 118; Significance: 3e-60; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 85 - 242
Target Start/End: Original strand, 10640 - 10797
Alignment:
Q  85 tcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgcatttttcgtcctgccc 184  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||||| |||    
T  10640 tcctcgtgttttggcctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcattttcgttgcatttttcgtcctaccc 10739  T
Q  185 cccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 242  Q
     ||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||    
T  10740 tccattttattctccaaaaatgcagagaaatgacagttttagacgtaccccctatgct 10797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 66 - 180
Target Start/End: Complemental strand, 11168 - 11054
Alignment:
Q  66 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttat 165  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| |    
T  11168 ggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacataacaaaacggtccttcaattatcatttttgt 11069  T
Q  166 tgcatttttcgtcct 180  Q
    |||||||||||||||    
T  11068 tgcatttttcgtcct 11054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 110; Significance: 2e-55; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 64 - 233
Target Start/End: Original strand, 18833 - 19001
Alignment:
Q  64 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 163  Q
    ||||||| |||||||||||||||||  ||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||| |||||||||||||||||    
T  18833 aaggcttcattacacttttggtccttctgttttggcctactcacgaaactggtcttgcccttttaaaacataacaaaacggtgcttcaattatcattttt 18932  T
Q  164 attgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctacc 233  Q
     ||||||||||| ||||  |||||||||||||||||||||||| |||||||| |||||||||||| ||||    
T  18933 gttgcatttttcatcct-acccccattttattctccaaaaacgcagagaaataacagttttagacttacc 19001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 66 - 163
Target Start/End: Complemental strand, 19166 - 19069
Alignment:
Q  66 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 163  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  19166 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaacttgtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 19069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 64 - 192
Target Start/End: Complemental strand, 28790 - 28662
Alignment:
Q  64 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 163  Q
    ||||| ||||||||||||||||| ||||||||||||||||| |||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  28790 aaggcataattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaacggtcattcaattatcattttt 28691  T
Q  164 attgcatttttcgtcctgccccccatttt 192  Q
     ||||| |||||||||| |||||||||||    
T  28690 gttgcagttttcgtccttccccccatttt 28662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 89; Significance: 5e-43; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 134 - 242
Target Start/End: Original strand, 16564 - 16672
Alignment:
Q  134 gaacaaaacggtccttcaattatcatttttattgcatttttcgtcctgccccccattttattctccaaaaacgtagagaaatgacagttttagacctacc 233  Q
    ||||||||||||||||||| |||||||||| |||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  16564 gaacaaaacggtccttcaagtatcatttttgttgcatttttcgtcataccccccattttattctccaaaaacgcagagaaatgacagttttagacctacc 16663  T
Q  234 ccctatgct 242  Q
    |||||||||    
T  16664 ccctatgct 16672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 83 - 226
Target Start/End: Complemental strand, 17024 - 16880
Alignment:
Q  83 ggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgcatttttcgtcctgc 182  Q
    ||||||||||||||| | ||||||||||| || ||| ||| ||||||||||||||||||  |||||||||||||||||||| |||||||||||||||| |    
T  17024 ggtcctcgtgttttgacttactcacgaaactgatcccgccattttaaaacagaacaaaattgtccttcaattatcatttttgttgcatttttcgtcctac 16925  T
Q  183 cccccatttt-attctccaaaaacgtagagaaatgacagttttag 226  Q
    | || ||||| |  ||||| ||||| |||||||| ||||||||||    
T  16924 ctcctattttcaaactccagaaacgcagagaaattacagttttag 16880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1585 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold1585
Description:

Target: scaffold1585; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 568 - 707
Alignment:
Q  67 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttatt 166  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| || || |||||||||||||||||||||||| |||||||||||||||||||| ||    
T  568 gcttaattacacttttgatcctcgtgttttggcctactcacgaaaatgatcatgcccttttaaaacagaacaaaactgtccttcaattatcatttttgtt 667  T
Q  167 gcatttttcgtcctgccccccattttattctccaaaaacg 206  Q
    | ||||||||||   || ||||||| || |||||||||||    
T  668 gtatttttcgtctcacctcccatttgatcctccaaaaacg 707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 74; Significance: 5e-34; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 69 - 206
Target Start/End: Complemental strand, 62000 - 61863
Alignment:
Q  69 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgc 168  Q
    ||||||||||||||| |||||||||||||| |||||||||||| ||||||| ||||||||||| |||||||||   || ||||| |||||||||| ||      
T  62000 ttaattacacttttgatcctcgtgttttggtctactcacgaaaatggtcctacccttttaaaatagaacaaaatcatcattcaaatatcatttttgttat 61901  T
Q  169 atttttcgtcctgccccccattttattctccaaaaacg 206  Q
    |||||||||||| ||||||||||| | |||||||||||    
T  61900 atttttcgtcctaccccccattttgtcctccaaaaacg 61863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 65 - 140
Target Start/End: Original strand, 61027 - 61102
Alignment:
Q  65 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaa 140  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||| || ||||||| |||||||| ||||||||    
T  61027 aggcttaagtacacttttgatcctcgtgttttggcctactcacgaaaatgatcctgccattttaaaatagaacaaa 61102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1696 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold1696
Description:

Target: scaffold1696; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 70 - 206
Target Start/End: Original strand, 454 - 588
Alignment:
Q  70 taattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgca 169  Q
    |||||||| |||||||| |||||||||||||||||||||||| ||||| ||  ||||||||||| |||| ||  |||||||||||||||||||| |||||    
T  454 taattaca-ttttggtcttcgtgttttggcctactcacgaaaatggtcatgatcttttaaaacaaaacataatcgtccttcaattatcatttttgttgca 552  T
Q  170 tttttcgtcctgccccccattttattctccaaaaacg 206  Q
    |||||||||||  | |||||||||| ||| |||||||    
T  553 tttttcgtcct-acacccattttatcctcaaaaaacg 588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 69 - 169
Target Start/End: Complemental strand, 8551 - 8451
Alignment:
Q  69 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgc 168  Q
    |||||||||||||||||| || |||||||| ||||| |||||| ||||||| ||||||||||||| | ||||||||||||||||||||||||||| ||||    
T  8551 ttaattacacttttggtcttcatgttttggtctacttacgaaactggtcctacccttttaaaacacagcaaaacggtccttcaattatcatttttgttgc 8452  T
Q  169 a 169  Q
    |    
T  8451 a 8451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 115 - 206
Target Start/End: Complemental strand, 7784 - 7693
Alignment:
Q  115 gtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgcatttttcgtcctgccccccattttattctccaaaaacg 206  Q
    ||||| |||||||||||||||||||||| ||| |||| ||||||||||| |||||||||||||||| ||||| ||||||| |||||||||||    
T  7784 gtccttcccttttaaaacagaacaaaactgtcgttcagttatcatttttgttgcatttttcgtcctaccccctattttatcctccaaaaacg 7693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1339 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1339
Description:

Target: scaffold1339; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 91
Target Start/End: Complemental strand, 62 - 30
Alignment:
Q  59 attataaggcttaattacacttttggtcctcgt 91  Q
    ||||| |||||||||||||||||||||||||||    
T  62 attattaggcttaattacacttttggtcctcgt 30  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0830 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0830
Description:

Target: scaffold0830; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 91
Target Start/End: Complemental strand, 5384 - 5352
Alignment:
Q  59 attataaggcttaattacacttttggtcctcgt 91  Q
    ||||| |||||||||||||||||||||||||||    
T  5384 attattaggcttaattacacttttggtcctcgt 5352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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