View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21095_low_3 (Length: 347)

Name: NF21095_low_3
Description: NF21095
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21095_low_3
NF21095_low_3
[»] chr3 (26 HSPs)
chr3 (18-280)||(34353645-34353906)
chr3 (281-331)||(228190-228240)
chr3 (281-331)||(44205130-44205180)
chr3 (281-331)||(39353920-39353970)
chr3 (281-331)||(47013037-47013087)
chr3 (281-331)||(47647729-47647779)
chr3 (281-331)||(49165378-49165428)
chr3 (281-331)||(53816747-53816797)
chr3 (282-331)||(9128450-9128499)
chr3 (282-331)||(9136557-9136606)
chr3 (281-331)||(16479018-16479068)
chr3 (281-331)||(21448327-21448377)
chr3 (281-331)||(30390515-30390565)
chr3 (281-331)||(48065733-48065783)
chr3 (281-331)||(49324990-49325040)
chr3 (288-331)||(39587383-39587426)
chr3 (281-331)||(8484112-8484161)
chr3 (281-331)||(36402097-36402147)
chr3 (281-331)||(41193035-41193085)
chr3 (281-331)||(47372448-47372498)
chr3 (280-331)||(6937238-6937287)
chr3 (281-331)||(3939147-3939197)
chr3 (281-331)||(26501474-26501523)
chr3 (281-331)||(32530597-32530647)
chr3 (282-329)||(41972442-41972489)
chr3 (281-329)||(31764471-31764519)
[»] chr1 (24 HSPs)
chr1 (280-331)||(12699826-12699877)
chr1 (281-331)||(22859483-22859533)
chr1 (281-331)||(38861504-38861554)
chr1 (281-331)||(39600535-39600585)
chr1 (281-331)||(41724291-41724341)
chr1 (281-331)||(41899561-41899611)
chr1 (281-331)||(48963609-48963659)
chr1 (281-328)||(29962212-29962259)
chr1 (281-331)||(3516868-3516918)
chr1 (281-331)||(14586611-14586661)
chr1 (281-331)||(22333549-22333599)
chr1 (281-331)||(29946036-29946086)
chr1 (281-331)||(30233569-30233619)
chr1 (281-331)||(33802143-33802193)
chr1 (281-331)||(41087229-41087279)
chr1 (281-331)||(41091997-41092047)
chr1 (281-331)||(44754682-44754732)
chr1 (281-331)||(12523418-12523468)
chr1 (281-331)||(49852539-49852589)
chr1 (281-331)||(50261271-50261321)
chr1 (281-331)||(7197719-7197769)
chr1 (281-331)||(12529187-12529237)
chr1 (281-331)||(10310246-10310296)
chr1 (281-330)||(27217613-27217662)
[»] chr8 (23 HSPs)
chr8 (281-331)||(28249556-28249606)
chr8 (281-331)||(39259577-39259627)
chr8 (281-331)||(39317893-39317943)
chr8 (281-331)||(42191570-42191620)
chr8 (283-331)||(11076998-11077046)
chr8 (281-331)||(6348127-6348177)
chr8 (281-331)||(8239262-8239312)
chr8 (281-331)||(13545529-13545579)
chr8 (281-331)||(13678894-13678944)
chr8 (281-331)||(24834986-24835036)
chr8 (281-331)||(35683291-35683341)
chr8 (281-329)||(42131199-42131247)
chr8 (281-331)||(40104523-40104574)
chr8 (281-331)||(23143402-23143452)
chr8 (281-331)||(31700303-31700353)
chr8 (281-331)||(37099135-37099185)
chr8 (285-331)||(43097805-43097851)
chr8 (283-331)||(20092689-20092737)
chr8 (281-331)||(225481-225531)
chr8 (281-331)||(701894-701944)
chr8 (281-331)||(739104-739154)
chr8 (281-331)||(862999-863049)
chr8 (281-331)||(32338643-32338693)
[»] chr7 (22 HSPs)
chr7 (281-331)||(7252984-7253034)
chr7 (281-331)||(36311373-36311423)
chr7 (281-331)||(43458957-43459007)
chr7 (281-331)||(44866851-44866901)
chr7 (281-329)||(29330010-29330058)
chr7 (281-328)||(14815930-14815977)
chr7 (281-328)||(15262925-15262972)
chr7 (281-331)||(25528383-25528433)
chr7 (281-331)||(35795269-35795319)
chr7 (281-331)||(46255669-46255719)
chr7 (281-330)||(114100-114149)
chr7 (281-329)||(34847098-34847146)
chr7 (281-331)||(33951747-33951798)
chr7 (281-331)||(26794136-26794186)
chr7 (281-331)||(35582738-35582788)
chr7 (281-331)||(38247411-38247461)
chr7 (281-331)||(41793503-41793553)
chr7 (281-331)||(43744975-43745025)
chr7 (284-331)||(15030317-15030364)
chr7 (281-331)||(38001040-38001088)
chr7 (281-331)||(32523920-32523970)
chr7 (281-331)||(8166538-8166588)
[»] chr6 (14 HSPs)
chr6 (281-331)||(304569-304619)
chr6 (281-331)||(11975784-11975834)
chr6 (281-331)||(31722178-31722228)
chr6 (281-331)||(34540706-34540756)
chr6 (281-331)||(481512-481562)
chr6 (281-331)||(16396155-16396205)
chr6 (281-331)||(18574743-18574793)
chr6 (281-331)||(18584624-18584674)
chr6 (281-331)||(34951224-34951274)
chr6 (281-329)||(31319334-31319382)
chr6 (281-331)||(9304275-9304325)
chr6 (281-331)||(31272068-31272118)
chr6 (285-331)||(439865-439911)
chr6 (281-331)||(29437319-29437369)
[»] chr5 (23 HSPs)
chr5 (281-331)||(8198194-8198244)
chr5 (281-331)||(8735507-8735557)
chr5 (281-331)||(12785975-12786025)
chr5 (281-331)||(16512865-16512915)
chr5 (281-331)||(25976411-25976461)
chr5 (281-331)||(27115116-27115166)
chr5 (281-331)||(38678738-38678788)
chr5 (282-331)||(8298526-8298575)
chr5 (282-329)||(11719216-11719263)
chr5 (281-331)||(1708981-1709031)
chr5 (281-331)||(3557435-3557485)
chr5 (281-331)||(5336464-5336514)
chr5 (281-331)||(12724492-12724542)
chr5 (281-331)||(17504440-17504490)
chr5 (281-331)||(18809783-18809833)
chr5 (281-331)||(26279868-26279918)
chr5 (281-331)||(37029572-37029622)
chr5 (281-331)||(37884232-37884282)
chr5 (281-331)||(24853582-24853632)
chr5 (281-329)||(20336767-20336815)
chr5 (281-329)||(22192639-22192687)
chr5 (281-331)||(6430849-6430899)
chr5 (279-328)||(27950887-27950936)
[»] chr4 (39 HSPs)
chr4 (281-331)||(1603595-1603645)
chr4 (281-331)||(4189162-4189212)
chr4 (281-331)||(4353402-4353452)
chr4 (281-331)||(6964264-6964314)
chr4 (281-331)||(9035374-9035424)
chr4 (281-331)||(30004369-30004419)
chr4 (281-331)||(31093911-31093961)
chr4 (281-331)||(38217559-38217609)
chr4 (281-331)||(45229881-45229931)
chr4 (281-331)||(45463000-45463050)
chr4 (281-331)||(45657199-45657249)
chr4 (281-331)||(47984206-47984256)
chr4 (281-331)||(49375128-49375178)
chr4 (281-331)||(52502220-52502270)
chr4 (281-331)||(53271663-53271713)
chr4 (283-331)||(167806-167854)
chr4 (281-331)||(13753084-13753134)
chr4 (281-331)||(15542096-15542146)
chr4 (281-331)||(16024678-16024728)
chr4 (281-331)||(28780061-28780111)
chr4 (281-331)||(35319153-35319203)
chr4 (281-331)||(38988373-38988423)
chr4 (281-331)||(51889981-51890031)
chr4 (281-331)||(53513103-53513153)
chr4 (281-331)||(55609800-55609850)
chr4 (281-329)||(4048950-4048998)
chr4 (281-329)||(5419642-5419690)
chr4 (284-331)||(44109391-44109438)
chr4 (281-328)||(47605212-47605259)
chr4 (280-331)||(51539426-51539476)
chr4 (281-331)||(35159532-35159582)
chr4 (281-331)||(40690693-40690743)
chr4 (281-331)||(40728841-40728891)
chr4 (285-331)||(56318592-56318638)
chr4 (281-331)||(38550548-38550598)
chr4 (281-331)||(56462944-56462994)
chr4 (281-316)||(28310160-28310195)
chr4 (281-331)||(52416208-52416257)
chr4 (281-331)||(52917184-52917233)
[»] chr2 (20 HSPs)
chr2 (281-331)||(5462069-5462119)
chr2 (281-331)||(6404927-6404977)
chr2 (281-331)||(43334483-43334533)
chr2 (281-331)||(45235038-45235088)
chr2 (281-329)||(1209190-1209238)
chr2 (281-331)||(13279488-13279538)
chr2 (281-331)||(15111009-15111059)
chr2 (281-331)||(17136977-17137027)
chr2 (281-331)||(31993353-31993403)
chr2 (281-331)||(45117821-45117871)
chr2 (281-331)||(7940818-7940868)
chr2 (281-331)||(15912523-15912573)
chr2 (281-331)||(38209144-38209194)
chr2 (281-331)||(44760846-44760896)
chr2 (281-331)||(1115916-1115966)
chr2 (281-331)||(30490044-30490093)
chr2 (281-331)||(38702882-38702932)
chr2 (281-328)||(5935533-5935580)
chr2 (281-328)||(34950842-34950889)
chr2 (281-321)||(16415294-16415334)
[»] scaffold0168 (1 HSPs)
scaffold0168 (281-329)||(17799-17847)
[»] scaffold0121 (1 HSPs)
scaffold0121 (281-327)||(46705-46751)
[»] scaffold0064 (1 HSPs)
scaffold0064 (279-319)||(61083-61123)


Alignment Details
Target: chr3 (Bit Score: 180; Significance: 4e-97; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 18 - 280
Target Start/End: Original strand, 34353645 - 34353906
Alignment:
Q  18 gaagcaacttatattaaaagaatctaatttatt-atattacttaaaacattcattctcaaataaaaacctttcaaacatagatagagatgaaaatttggt 116  Q
    |||| |||||||||||||||||||||||||||| || || |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  34353645 gaagaaacttatattaaaagaatctaatttatttatgttgcttaaaacattcattctcaaataaaaaccttt-aaacatagatagagataaaaatttggt 34353743  T
Q  117 atattagtccaaatttggtcattcatccaagttgcacaatttatcacccttttaggcacaaaggtatcttgccgcagtgtaaccaaactctccaagtcat 216  Q
    |||||||||||||||||||||||  | ||||||||||||||||||||||||| || ||||||| |||||||| ||||||||||||||||||| |||||||    
T  34353744 atattagtccaaatttggtcattggttcaagttgcacaatttatcaccctttcagtcacaaag-tatcttgctgcagtgtaaccaaactctcgaagtcat 34353842  T
Q  217 agcttttctctaaacgtgaggtaacacaatgattttatggatttccaaacacggcgatattgta 280  Q
    ||||| |||||||| ||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  34353843 agcttctctctaaatgtgaggtaacacagtgattatatggatttccaaacacggcgatattgta 34353906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 228240 - 228190
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  228240 attacaataattttcaagctttttaaacttattacataagatcctaaatct 228190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 44205130 - 44205180
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44205130 attacaataattttcaagctttttaaacttattacataagatcctaaatct 44205180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 39353970 - 39353920
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  39353970 attacaataattttcaagctttttaagcttattacataagatcctaaatct 39353920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 47013037 - 47013087
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  47013037 attacaataattttcaagctttttaagcttattacataagatcctaaatct 47013087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 47647779 - 47647729
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  47647779 attacaataattttcaagctttttaagcttattacataagatcctaaatct 47647729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 49165378 - 49165428
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  49165378 attacaataattttcaagctttttaagcttattacataagatcctaaatct 49165428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 53816797 - 53816747
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  53816797 attacaataattttcaagctttttaagcttattacataagatcctaaatct 53816747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 282 - 331
Target Start/End: Complemental strand, 9128499 - 9128450
Alignment:
Q  282 ttacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  9128499 ttacaataattttcaagctttttaagcttattacataagatcctaaatct 9128450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 282 - 331
Target Start/End: Complemental strand, 9136606 - 9136557
Alignment:
Q  282 ttacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  9136606 ttacaataattttcaagctttttaagcttattacataagatcctaaatct 9136557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 16479068 - 16479018
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  16479068 attacaataattttcaagctttttaagcttattacataagatgctaaatct 16479018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 21448327 - 21448377
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  21448327 attacaataattttcaagttttttaagcttattacataagatcctaaatct 21448377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 30390565 - 30390515
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  30390565 attacaataattttcaagttttttaagcttattacataagatcctaaatct 30390515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 48065783 - 48065733
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  48065783 attacaataattttcaagctttttaagcttattacataagatgctaaatct 48065733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 49324990 - 49325040
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  49324990 attacaataattttcaagctttttaagcttattacataagatgctaaatct 49325040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 288 - 331
Target Start/End: Complemental strand, 39587426 - 39587383
Alignment:
Q  288 taattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  39587426 taattttcaagctttttaagcttattacataagatcctaaatct 39587383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 8484112 - 8484161
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  8484112 attacaataattt-caagctttttaagcttattacataagatcctaaatct 8484161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 36402097 - 36402147
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||| ||||||| |||||||| |||||||    
T  36402097 attacaataattttcaagctttttaagcttattaaataagatcttaaatct 36402147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 41193035 - 41193085
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    ||||||||||||||||||||| |||| |||||||| |||||||||||||||    
T  41193035 attacaataattttcaagcttcttaagcttattacgtaagatcctaaatct 41193085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 47372448 - 47372498
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||| |||||||||| |||| ||||||||    
T  47372448 attacaataattttcaagctttttaagcttattacatgagatgctaaatct 47372498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 280 - 331
Target Start/End: Complemental strand, 6937287 - 6937238
Alignment:
Q  280 aattacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    ||||||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  6937287 aattacaataattttcaagctttttaagct--ttacataagatcctaaatct 6937238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 3939147 - 3939197
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||| ||||||||||| | ||||||||||||| ||||||||    
T  3939147 attacaataatttttaagctttttaagcctattacataagatgctaaatct 3939197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 26501474 - 26501523
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    ||||||||||||||||| |||||||| ||||||| ||||||||||||||||    
T  26501474 attacaataattttcaa-ctttttaagcttattatataagatcctaaatct 26501523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 32530647 - 32530597
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||| ||||||  |||||||| |||||||    
T  32530647 attacaataattttcaagctttttaagcttattttataagatcttaaatct 32530597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 282 - 329
Target Start/End: Original strand, 41972442 - 41972489
Alignment:
Q  282 ttacaataattttcaagctttttaaacttattacataagatcctaaat 329  Q
    ||||||||||||||||  ||||||| |||||||||||| |||||||||    
T  41972442 ttacaataattttcaaattttttaagcttattacataaaatcctaaat 41972489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 329
Target Start/End: Original strand, 31764471 - 31764519
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaat 329  Q
    ||||||||||| || ||||||||||| ||||||| |||||| |||||||    
T  31764471 attacaataatgttgaagctttttaagcttattatataagaacctaaat 31764519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 2e-18; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 280 - 331
Target Start/End: Original strand, 12699826 - 12699877
Alignment:
Q  280 aattacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  12699826 aattacaataattttcaagctttttaagcttattacataagatcctaaatct 12699877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 22859533 - 22859483
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  22859533 attacaataattttcaagctttttaagcttattacataagatcctaaatct 22859483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 38861554 - 38861504
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  38861554 attacaataattttcaagctttttaagcttattacataagatcctaaatct 38861504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 39600585 - 39600535
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  39600585 attacaataattttcaagctttttaagcttattacataagatcctaaatct 39600535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 41724341 - 41724291
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  41724341 attacaataattttcaagatttttaaacttattacataagatcctaaatct 41724291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 41899561 - 41899611
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  41899561 attacaataattttcaagctttttaagcttattacataagatcctaaatct 41899611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 48963609 - 48963659
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  48963609 attacaataattttcaagctttttaagcttattacataagatcctaaatct 48963659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 281 - 328
Target Start/End: Complemental strand, 29962259 - 29962212
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaa 328  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||    
T  29962259 attacaataattttcaagctttttaagcttattacataagatcctaaa 29962212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 3516868 - 3516918
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  3516868 attacaataattttcaagctttttaagcttattacataagattctaaatct 3516918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 14586611 - 14586661
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  14586611 attacaataattttcaagttttttaaacttattgcataagatcctaaatct 14586661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 22333549 - 22333599
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  22333549 attacaataattttcaagctttttaagcttattacataagatgctaaatct 22333599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 29946036 - 29946086
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  29946036 attacaataattttcaagctttataaacttattacataagatgctaaatct 29946086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 30233619 - 30233569
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  30233619 attacaataattttcaagttttttaatcttattacataagatcctaaatct 30233569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 33802193 - 33802143
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  33802193 attactataattttcaagctttttaagcttattacataagatcctaaatct 33802143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 41087279 - 41087229
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  41087279 attacaataattttcaagctttttaagcttattacataagattctaaatct 41087229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 41092047 - 41091997
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  41092047 attacaataattttcaagctttttaagcttattacataagattctaaatct 41091997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 44754682 - 44754732
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  44754682 attacaataattttcaagctttttaagcttattacataagatcataaatct 44754732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 12523418 - 12523468
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||| |||||||||||||||  |||||||    
T  12523418 attacaataattttcaagctttttaagcttattacataagatgttaaatct 12523468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 49852589 - 49852539
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||  ||||| ||||||||||||||||||||||||    
T  49852589 attacaataattttcaagcactttaagcttattacataagatcctaaatct 49852539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 50261271 - 50261321
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||| ||||||| |||||||||||||||| |||||||    
T  50261271 attacaataattttcaagttttttaagcttattacataagatcataaatct 50261321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 7197719 - 7197769
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||| || |||||||| ||||||||||||||| ||||||||    
T  7197719 attacaataatttttaaactttttaagcttattacataagatgctaaatct 7197769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 12529237 - 12529187
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||| ||| ||||||| |||||||| |||||||    
T  12529237 attacaataattttcaagctttgtaagcttattatataagatcttaaatct 12529187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 10310246 - 10310296
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||| | ||||||| || |||||||||||| ||||||||    
T  10310246 attacaataattttcatgatttttaagctcattacataagatgctaaatct 10310296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 330
Target Start/End: Complemental strand, 27217662 - 27217613
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatc 330  Q
    ||||||||||  || ||||||||||| |||||||||||||| ||||||||    
T  27217662 attacaataacgttgaagctttttaagcttattacataagaacctaaatc 27217613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 9e-18; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 28249606 - 28249556
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  28249606 attacaataattttcaagctttttaagcttattacataagatcctaaatct 28249556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 39259577 - 39259627
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  39259577 attacaataattttcaagctttttaagcttattacataagatcctaaatct 39259627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 39317893 - 39317943
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  39317893 attacaataattttcaagctttttaagcttattacataagatcctaaatct 39317943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 42191620 - 42191570
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  42191620 attacaataattttcaagctttttaagcttattacataagatcctaaatct 42191570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 283 - 331
Target Start/End: Complemental strand, 11077046 - 11076998
Alignment:
Q  283 tacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  11077046 tacaataattttcaagctttttaagcttattacataagatcctaaatct 11076998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 6348177 - 6348127
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  6348177 attacaataattttcaagctttttaagcttattatataagatcctaaatct 6348127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 8239262 - 8239312
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  8239262 attacaataattttcaagctttttaagcttattacataatatcctaaatct 8239312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 13545529 - 13545579
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  13545529 attaaaataattttcaagctttttaagcttattacataagatcctaaatct 13545579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 13678944 - 13678894
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  13678944 attaaaataattttcaagctttttaagcttattacataagatcctaaatct 13678894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 24835036 - 24834986
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  24835036 attacaataattttcaagctttttaagcttattacataagatcttaaatct 24834986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 35683291 - 35683341
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  35683291 attacaataattttaaagctttttaagcttattacataagatcctaaatct 35683341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 281 - 329
Target Start/End: Original strand, 42131199 - 42131247
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaat 329  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||    
T  42131199 attacaataattttcaagctttttaagcttattacataagatcttaaat 42131247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 40104523 - 40104574
Alignment:
Q  281 attacaataattttcaagctttttaaa-cttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  40104523 attacaataattttcaagcttttttaagcttattacataagatcctaaatct 40104574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 23143402 - 23143452
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||| ||||||| ||||||||||||||| ||||||||    
T  23143402 attacaataattttcaagttttttaagcttattacataagattctaaatct 23143452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 31700303 - 31700353
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||| ||||||||||| ||||||||| ||||||||||||||||||||||||    
T  31700303 attataataattttcaggctttttaagcttattacataagatcctaaatct 31700353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 37099185 - 37099135
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||| ||||||| |||||||||| |||||||||||||    
T  37099185 attacaataattttcaagttttttaaccttattacatcagatcctaaatct 37099135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 285 - 331
Target Start/End: Original strand, 43097805 - 43097851
Alignment:
Q  285 caataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||| |||||||||||| |||||||||||    
T  43097805 caataattttcaagctttttaagcttattacataatatcctaaatct 43097851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 283 - 331
Target Start/End: Complemental strand, 20092737 - 20092689
Alignment:
Q  283 tacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||| |||||| ||||||||| |||||||    
T  20092737 tacaataattttcaagctttttaagcttattgcataagatcttaaatct 20092689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 225531 - 225481
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    ||||||||||| || ||||||||||| |||||||||||||| |||||||||    
T  225531 attacaataatgttgaagctttttaagcttattacataagaacctaaatct 225481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 701944 - 701894
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    ||||||||||| || ||||||||||| |||||||||||||| |||||||||    
T  701944 attacaataatgttgaagctttttaagcttattacataagaacctaaatct 701894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 739154 - 739104
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    ||||||||||| || ||||||||||| |||||||||||||| |||||||||    
T  739154 attacaataatgttgaagctttttaagcttattacataagaacctaaatct 739104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 863049 - 862999
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    ||||||||||| || ||||||||||| |||||||||||||| |||||||||    
T  863049 attacaataatgttgaagctttttaagcttattacataagaacctaaatct 862999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 32338693 - 32338643
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    ||||||||||||||||||||||| ||  ||||||||||||||| |||||||    
T  32338693 attacaataattttcaagcttttaaagtttattacataagatcttaaatct 32338643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 9e-18; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 7252984 - 7253034
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  7252984 attacaataattttcaagctttttaagcttattacataagatcctaaatct 7253034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 36311373 - 36311423
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  36311373 attacaataattttcaagctttttaagcttattacataagatcctaaatct 36311423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 43459007 - 43458957
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  43459007 attacaataattttcaagctttttaaacttactacataagatcctaaatct 43458957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 44866901 - 44866851
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  44866901 attacaataattttcaagctttttaagcttattacataagatcctaaatct 44866851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 281 - 329
Target Start/End: Original strand, 29330010 - 29330058
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaat 329  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  29330010 attacaataattttcaagctttttaagcttattacataagatcctaaat 29330058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 281 - 328
Target Start/End: Original strand, 14815930 - 14815977
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaa 328  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||    
T  14815930 attacaataattttcaagctttttaagcttattacataagatcctaaa 14815977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 281 - 328
Target Start/End: Original strand, 15262925 - 15262972
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaa 328  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||    
T  15262925 attacaataattttcaagctttttaagcttattacataagatcctaaa 15262972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 25528383 - 25528433
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  25528383 attacaataattttcaaactttttaaacttattacataagatcctcaatct 25528433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 35795319 - 35795269
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  35795319 attacaaaaattttcaagctttttaagcttattacataagatcctaaatct 35795269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 46255719 - 46255669
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  46255719 attacaataattttcaagttttttaagcttattacataagatcctaaatct 46255669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 281 - 330
Target Start/End: Complemental strand, 114149 - 114100
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatc 330  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  114149 attacaataattttcaagctttttaagcttattatataagatcctaaatc 114100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 281 - 329
Target Start/End: Original strand, 34847098 - 34847146
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaat 329  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  34847098 attacaataattttcaagctttttaaggttattacataagatcctaaat 34847146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 33951798 - 33951747
Alignment:
Q  281 attacaataattttcaagctttttaaa-cttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  33951798 attacaataattttcaagcttttttaagcttattacataagatcctaaatct 33951747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 26794186 - 26794136
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    ||||||||||||||||||||||| || ||||||||||||||| ||||||||    
T  26794186 attacaataattttcaagcttttgaatcttattacataagatgctaaatct 26794136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 35582738 - 35582788
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    ||||||||||||||||||||||||||  |||||||||||||| ||||||||    
T  35582738 attacaataattttcaagctttttaagtttattacataagatactaaatct 35582788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 38247411 - 38247461
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||| |||||||||||| ||| |||||||    
T  38247411 attacaataattttcaagctttttaagcttattacataatatcataaatct 38247461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 41793553 - 41793503
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    ||||||||||||||||||||||||||  ||||||||||||||| |||||||    
T  41793553 attacaataattttcaagctttttaagtttattacataagatcataaatct 41793503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 43744975 - 43745025
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||| |||||||||||  |||||||||||||||||||||||    
T  43744975 attacaataatttttaagctttttaagattattacataagatcctaaatct 43745025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 284 - 331
Target Start/End: Original strand, 15030317 - 15030364
Alignment:
Q  284 acaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||| |||||||| ||||||||||||||| ||||||||    
T  15030317 acaataattttcaacctttttaagcttattacataagatgctaaatct 15030364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 38001088 - 38001040
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||  ||||||||||| ||||||||||||||||||||||||    
T  38001088 attacaataattt--aagctttttaagcttattacataagatcctaaatct 38001040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 32523920 - 32523970
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||| ||||||| ||||||| ||||||||| ||||||    
T  32523920 attacaataattttcaagttttttaagcttattatataagatcccaaatct 32523970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 8166588 - 8166538
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    ||||||||||| || ||| ||||||| |||||||||||||| |||||||||    
T  8166588 attacaataatgttgaagttttttaagcttattacataagaacctaaatct 8166538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 9e-18; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 304619 - 304569
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  304619 attacaataattttcaagctttttaagcttattacataagatcctaaatct 304569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 11975834 - 11975784
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  11975834 attacaataattttcaagctttttaagcttattacataagatcctaaatct 11975784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 31722178 - 31722228
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  31722178 attacaataattttcaagctttttaagcttattacataagatcctaaatct 31722228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 34540706 - 34540756
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  34540706 attacaataattttcaagctttttaagcttattacataagatcctaaatct 34540756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 481562 - 481512
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  481562 attacaataattttcaagctttttaatcttattacacaagatcctaaatct 481512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 16396205 - 16396155
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  16396205 attacaataattttcaagttttttaagcttattacataagatcctaaatct 16396155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 18574793 - 18574743
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  18574793 attacaataattttcaagttttttaagcttattacataagatcctaaatct 18574743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 18584674 - 18584624
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  18584674 attacaataattttcaagttttttaagcttattacataagatcctaaatct 18584624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 34951274 - 34951224
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  34951274 attacaataattttcaagctttttaagcttattacataagatgctaaatct 34951224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 281 - 329
Target Start/End: Complemental strand, 31319382 - 31319334
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaat 329  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  31319382 attacaataattttcaagctttttaaggttattacataagatcctaaat 31319334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 9304275 - 9304325
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||| ||||||| ||||||||||| ||||||||||||    
T  9304275 attacaataattttcaagttttttaagcttattacatatgatcctaaatct 9304325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 31272118 - 31272068
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    ||||||||||||||||||||||||||  |||||| ||||||||||||||||    
T  31272118 attacaataattttcaagctttttaagtttattatataagatcctaaatct 31272068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 331
Target Start/End: Complemental strand, 439911 - 439865
Alignment:
Q  285 caataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||| ||||||||||| | ||||||||||||||||||||||    
T  439911 caataatttttaagctttttaagcctattacataagatcctaaatct 439865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 29437369 - 29437319
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||| ||||||||||||||| |||||||||||||||  |||||||    
T  29437369 attacaataactttcaagctttttaagcttattacataagatgttaaatct 29437319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 9e-18; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 8198244 - 8198194
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  8198244 attacaataattttcaagctttttaagcttattacataagatcctaaatct 8198194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 8735557 - 8735507
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  8735557 attacaataattttcaagctttttaagcttattacataagatcctaaatct 8735507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 12786025 - 12785975
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  12786025 attacaataattttcaagctttttaagcttattacataagatcctaaatct 12785975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 16512865 - 16512915
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  16512865 attacaataattttcaagctttttaagcttattacataagatcctaaatct 16512915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 25976411 - 25976461
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  25976411 attacaataattttcaagctttttaagcttattacataagatcctaaatct 25976461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 27115166 - 27115116
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  27115166 attacaataattttcaagctttttaaacttattacataagatcataaatct 27115116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 38678738 - 38678788
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  38678738 attacaataattttcaagctttttaagcttattacataagatcctaaatct 38678788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 282 - 331
Target Start/End: Original strand, 8298526 - 8298575
Alignment:
Q  282 ttacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  8298526 ttacaataattttcaagctttttaagcttattacataagatcctaaatct 8298575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 282 - 329
Target Start/End: Original strand, 11719216 - 11719263
Alignment:
Q  282 ttacaataattttcaagctttttaaacttattacataagatcctaaat 329  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||    
T  11719216 ttacaataattttcaagctttttaaacttattacataagatcttaaat 11719263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 1708981 - 1709031
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  1708981 attacaataattttcaagctttttaagcttattacataagatgctaaatct 1709031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 3557485 - 3557435
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  3557485 attataataattttcaagctttttaagcttattacataagatcctaaatct 3557435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 5336464 - 5336514
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  5336464 attacaataattttcaagctttttaagcttattacataagatgctaaatct 5336514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 12724542 - 12724492
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  12724542 attacaataattttcaagttttttaagcttattacataagatcctaaatct 12724492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 17504490 - 17504440
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||||||||||| |||||||| |||||||    
T  17504490 attacaataattttcaagctttttaaacttattatataagatcataaatct 17504440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 18809833 - 18809783
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  18809833 attacaataattttcaagttttttaagcttattacataagatcctaaatct 18809783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 26279918 - 26279868
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  26279918 attacaataattttcaagctttttaagcgtattacataagatcctaaatct 26279868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 37029572 - 37029622
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  37029572 attacaataattttcaagctttttaagcttattacataagatccttaatct 37029622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 37884282 - 37884232
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  37884282 attacaataattttcaagctttttaagcttattacgtaagatcctaaatct 37884232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 24853582 - 24853632
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||| ||||||||||||||||||| |||||||||| |||||||||||||    
T  24853582 attacattaattttcaagctttttaagcttattacatgagatcctaaatct 24853632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 281 - 329
Target Start/End: Original strand, 20336767 - 20336815
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaat 329  Q
    |||||||||||||||||||||||||| | ||||||||||||| ||||||    
T  20336767 attacaataattttcaagctttttaagcctattacataagatactaaat 20336815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 281 - 329
Target Start/End: Complemental strand, 22192687 - 22192639
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaat 329  Q
    |||||||||||||||||||| | ||| ||||||||||||||||||||||    
T  22192687 attacaataattttcaagctatctaagcttattacataagatcctaaat 22192639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 6430849 - 6430899
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||| ||||||| |||||||||||||||  |||||||    
T  6430849 attacaataattttcaagttttttaagcttattacataagatgttaaatct 6430899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 328
Target Start/End: Complemental strand, 27950936 - 27950887
Alignment:
Q  279 taattacaataattttcaagctttttaaacttattacataagatcctaaa 328  Q
    ||||||||||||| || ||||||||||| |||||||||||||| ||||||    
T  27950936 taattacaataatgttgaagctttttaagcttattacataagaacctaaa 27950887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 9e-18; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 1603645 - 1603595
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  1603645 attacaataattttcaagctttttaagcttattacataagatcctaaatct 1603595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 4189162 - 4189212
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  4189162 attacaataattttcaagctttttaagcttattacataagatcctaaatct 4189212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 4353452 - 4353402
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  4353452 attacaataattttcaagctttttaagcttattacataagatcctaaatct 4353402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 6964314 - 6964264
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  6964314 attacaataattttcaagctttttaagcttattacataagatcctaaatct 6964264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 9035374 - 9035424
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  9035374 attacaataattttcaagctttttaagcttattacataagatcctaaatct 9035424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 30004419 - 30004369
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  30004419 attacaataattttcaagctttttaagcttattacataagatcctaaatct 30004369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 31093961 - 31093911
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  31093961 attacaataattttcaagctttttaagcttattacataagatcctaaatct 31093911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 38217559 - 38217609
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  38217559 attacaataattttcaagctttttaagcttattacataagatcctaaatct 38217609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 45229931 - 45229881
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  45229931 attacaataattttcaagctttttaagcttattacataagatcctaaatct 45229881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 45463050 - 45463000
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  45463050 attacaatcattttcaagctttttaaacttattacataagatcctaaatct 45463000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 45657199 - 45657249
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  45657199 attacaataattttcaagctttttaagcttattacataagatcctaaatct 45657249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 47984206 - 47984256
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  47984206 attacaataattttcaagctttttaagcttattacataagatcctaaatct 47984256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 49375178 - 49375128
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  49375178 attacaataattttcaagctttttaagcttattacataagatcctaaatct 49375128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 52502270 - 52502220
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  52502270 attacaataattttcaagctttttaagcttattacataagatcctaaatct 52502220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 53271713 - 53271663
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  53271713 attacaataattttcaagctttttaagcttattacataagatcctaaatct 53271663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 283 - 331
Target Start/End: Original strand, 167806 - 167854
Alignment:
Q  283 tacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  167806 tacaataattttcaagctttttaagcttattacataagatcctaaatct 167854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 13753134 - 13753084
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  13753134 attacaataattttcaagctttttaagcttattacataagatgctaaatct 13753084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 15542096 - 15542146
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  15542096 attacaataattttcaagttttttaagcttattacataagatcctaaatct 15542146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 16024728 - 16024678
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  16024728 attacaataattttcaagctttttatgcttattacataagatcctaaatct 16024678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 28780061 - 28780111
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  28780061 attacaataattttcaagctttttaagcttatcacataagatcctaaatct 28780111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 35319153 - 35319203
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  35319153 attacaataattttcaagttttttaagcttattacataagatcctaaatct 35319203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 38988373 - 38988423
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  38988373 attacaataattttcaagttttttaagcttattacataagatcctaaatct 38988423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 51890031 - 51889981
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  51890031 attacaataattttcaagctttttaagcttattacataagatgctaaatct 51889981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 53513153 - 53513103
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  53513153 attacaataattttcaagctttttaagcttattacataagatgctaaatct 53513103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 55609800 - 55609850
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  55609800 attacaataattttcaagctttttaagcttattacataagatgctaaatct 55609850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 281 - 329
Target Start/End: Complemental strand, 4048998 - 4048950
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaat 329  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  4048998 attacaataattttcaagctttttaagtttattacataagatcctaaat 4048950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 281 - 329
Target Start/End: Complemental strand, 5419690 - 5419642
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaat 329  Q
    |||||||||||||||||||||||||| | ||||||||||||||||||||    
T  5419690 attacaataattttcaagctttttaagcctattacataagatcctaaat 5419642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 284 - 331
Target Start/End: Complemental strand, 44109438 - 44109391
Alignment:
Q  284 acaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  44109438 acaataattttcaagttttttaagcttattacataagatcctaaatct 44109391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 281 - 328
Target Start/End: Complemental strand, 47605259 - 47605212
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaa 328  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||    
T  47605259 attacaataattttcaagctttttaagcttattacataagatgctaaa 47605212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 280 - 331
Target Start/End: Complemental strand, 51539476 - 51539426
Alignment:
Q  280 aattacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  51539476 aattacaataattttcaagctttt-aagcttattacataagatcctaaatct 51539426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 35159582 - 35159532
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||| |||||||||||||||  |||||||    
T  35159582 attacaataattttcaagctttttaagcttattacataagatgttaaatct 35159532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 40690693 - 40690743
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||| ||||||| ||||||||||||||| ||||||||    
T  40690693 attacaataattttcaagttttttaagcttattacataagatgctaaatct 40690743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 40728891 - 40728841
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||| |||||||  |||||||||||||||||||||||    
T  40728891 attacaataattttcaagttttttaagtttattacataagatcctaaatct 40728841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 285 - 331
Target Start/End: Complemental strand, 56318638 - 56318592
Alignment:
Q  285 caataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||||    
T  56318638 caataattttcaaactttttaagcttattacataagatcctaaatct 56318592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 38550548 - 38550598
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||| ||||||||||||||||||||| |||| ||||||||||| |||||||    
T  38550548 attataataattttcaagctttttaagcttaatacataagatcttaaatct 38550598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 56462944 - 56462994
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||| ||||| | | ||||||||||||||    
T  56462944 attacaataattttcaagctttttaagcttatgatacaagatcctaaatct 56462994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 316
Target Start/End: Original strand, 28310160 - 28310195
Alignment:
Q  281 attacaataattttcaagctttttaaacttattaca 316  Q
    |||||||||||||||||||||||||| |||||||||    
T  28310160 attacaataattttcaagctttttaagcttattaca 28310195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 52416208 - 52416257
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||| ||| ||| ||||||||||||||| ||||||||    
T  52416208 attacaataattttcaag-tttgtaagcttattacataagattctaaatct 52416257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 52917184 - 52917233
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||| |||||||||||| || |||||| |||||||||||||||||    
T  52917184 attacaataactttcaagctttt-aagcttattgcataagatcctaaatct 52917233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 9e-18; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 5462069 - 5462119
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  5462069 attacaataattttcaagctttttaagcttattacataagatcctaaatct 5462119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 6404977 - 6404927
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  6404977 attacaataattttcaagctttttaagcttattacataagatcctaaatct 6404927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 43334533 - 43334483
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  43334533 attacaataattttcaagctttttaaacttattacataagatgctaaatct 43334483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 45235088 - 45235038
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  45235088 attacaataattttcaagctttttaagcttattacataagatcctaaatct 45235038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 281 - 329
Target Start/End: Original strand, 1209190 - 1209238
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaat 329  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  1209190 attacaataattttcaagctttttaagcttattacataagatcctaaat 1209238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 13279538 - 13279488
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  13279538 attacattaattttcaagctttttaagcttattacataagatcctaaatct 13279488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 15111009 - 15111059
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  15111009 attacaataattttcaagctttttaagcttattacataagattctaaatct 15111059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 17136977 - 17137027
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  17136977 attacaataattttcaagctttttaagcttattacataagttcctaaatct 17137027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 31993353 - 31993403
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  31993353 attacaataattttcaagatttttaagcttattacataagatcctaaatct 31993403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 45117871 - 45117821
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  45117871 attacaataattttcaagctttttaagcttattacataagatcttaaatct 45117821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 7940818 - 7940868
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    ||||||||||||||||| |||||||| ||||||| ||||||||||||||||    
T  7940818 attacaataattttcaaactttttaagcttattatataagatcctaaatct 7940868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 15912573 - 15912523
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    ||||||||||||||||||||||||||  ||||| |||||||||||||||||    
T  15912573 attacaataattttcaagctttttaagtttattccataagatcctaaatct 15912523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 38209194 - 38209144
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    ||||||||||||||||||  |||||| ||||||||||||||||||||||||    
T  38209194 attacaataattttcaagtcttttaagcttattacataagatcctaaatct 38209144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 44760896 - 44760846
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    ||||||||||||||||| ||||| || ||||||||||||||||||||||||    
T  44760896 attacaataattttcaaccttttcaagcttattacataagatcctaaatct 44760846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 1115966 - 1115916
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    |||| ||||| ||||||||||||||  ||||||||||||||||||||||||    
T  1115966 attataataactttcaagctttttaggcttattacataagatcctaaatct 1115916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 30490044 - 30490093
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    ||||| ||||||||||||||||||||  |||||||||||||||||||||||    
T  30490044 attactataattttcaagctttttaag-ttattacataagatcctaaatct 30490093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 38702882 - 38702932
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaatct 331  Q
    ||||||||||||||||| |||||||  ||||||| ||||||||||||||||    
T  38702882 attacaataattttcaaactttttaggcttattatataagatcctaaatct 38702932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 328
Target Start/End: Original strand, 5935533 - 5935580
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaa 328  Q
    ||||||||||| || ||||||||||| |||||||||||||| ||||||    
T  5935533 attacaataatgttgaagctttttaagcttattacataagaacctaaa 5935580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 328
Target Start/End: Complemental strand, 34950889 - 34950842
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaa 328  Q
    ||||||||||| || ||||||||||| |||||||||||||| ||||||    
T  34950889 attacaataatgttaaagctttttaagcttattacataagaacctaaa 34950842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 321
Target Start/End: Complemental strand, 16415334 - 16415294
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataaga 321  Q
    ||||||||||| || ||||||||||| ||||||||||||||    
T  16415334 attacaataatgttgaagctttttaagcttattacataaga 16415294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 281 - 329
Target Start/End: Complemental strand, 17847 - 17799
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaaat 329  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  17847 attacaataattttcaagttttttaagcttattacataagatcctaaat 17799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 327
Target Start/End: Original strand, 46705 - 46751
Alignment:
Q  281 attacaataattttcaagctttttaaacttattacataagatcctaa 327  Q
    ||||||||||| || ||||||||||| |||||||||||||| |||||    
T  46705 attacaataatgttgaagctttttaagcttattacataagaacctaa 46751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 319
Target Start/End: Original strand, 61083 - 61123
Alignment:
Q  279 taattacaataattttcaagctttttaaacttattacataa 319  Q
    ||||||||||||| || ||||||||||| ||||||||||||    
T  61083 taattacaataatgttgaagctttttaagcttattacataa 61123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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