View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21096_low_14 (Length: 303)
Name: NF21096_low_14
Description: NF21096
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21096_low_14 |
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Alignment Details
Target: chr7 (Bit Score: 211; Significance: 1e-115; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 42 - 290
Target Start/End: Original strand, 25172217 - 25172462
Alignment:
| Q |
42 |
gccaaattgttatgccagcgaactgaaaacacatcaatgatagtgtatgtataatactactacaacttacctcgcttagatttccatcatagccagtttc |
141 |
Q |
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| T |
25172217 |
gccaaatttttatgccagcgaactgaaaacacatcaatgatagtgtatgtataatact---acaacttacctcgcttagatttccatcatagccagtttc |
25172313 |
T |
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| Q |
142 |
taacacaagttcaaattgctgatgccggttcctaacagatgctgtcagtgttttgttgtgctcattctcaacctaaaatctgcaaacaattaattataat |
241 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| |||||||||||| |
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| T |
25172314 |
taacacaagttcaaattgctgatgccggttcctaacagatgctgtcagtgttttgttgtgctcattctcaacctaaaatgtgaaaactattaattataat |
25172413 |
T |
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| Q |
242 |
ttgaaataaaagggtaatgtaatgaattatagttagaaatctagcatat |
290 |
Q |
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||||||||||||||||| |||||||||||| |||||||||||||||||| |
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| T |
25172414 |
ttgaaataaaagggtaaggtaatgaattattgttagaaatctagcatat |
25172462 |
T |
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