View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF21096_low_8 (Length: 381)
Name: NF21096_low_8
Description: NF21096
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21096_low_8 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 352; Significance: 0; HSPs: 29)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 352; E-Value: 0
Query Start/End: Original strand, 1 - 364
Target Start/End: Original strand, 10494348 - 10494711
Alignment:
| Q |
1 |
tgatttgggtggtggtacttttgatgtgtctatcctcacaattaagggcgatgtctttgaagtaaaagccaccgcaggtaacactcaccttgggggagag |
100 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
10494348 |
tgatctgggtggtggtacttttgatgtgtctatcctcacaattaagggtgatgtctttgaagtaaaagccactgcaggtaacactcaccttgggggagag |
10494447 |
T |
|
| Q |
101 |
gacttcgataacagaatggtgaattattttgttgaggagttcaaaaagaagaataacgtggacatcagtgggaatccaaaatccttaaggaggttgagaa |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10494448 |
gacttcgataacagaatggtgaattattttgttgaggagttcaaaaagaagaataacgtggacatcagtgggaatccaaaatccttaaggaggttgagaa |
10494547 |
T |
|
| Q |
201 |
ctgcctgtgagagggcaaaaaggatactctctttttcttttgtcaccaccgttgaggtcgatgctttatttatgggaatcgacttttcttcatcaatcac |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10494548 |
ctgcctgtgagagggcaaaaaggatactctctttttcttttgtcaccaccgttgaggtcgatgctttatttatgggaatcgacttttcttcatcaatcac |
10494647 |
T |
|
| Q |
301 |
tcgtgccaaatttgaggaaattaatatagactttttcatcgagtgtatgaatattgttgacagt |
364 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10494648 |
tcgtgccaaatttgaggaaattaatatagactttttcatcgagtgtatgaatattgttgacagt |
10494711 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 1 - 364
Target Start/End: Original strand, 13333430 - 13333793
Alignment:
| Q |
1 |
tgatttgggtggtggtacttttgatgtgtctatcctcacaattaagggcgatgtctttgaagtaaaagccaccgcaggtaacactcaccttgggggagag |
100 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
13333430 |
tgatctgggtggtggtacttttgatgtgtctatccttacaattatgggtgatgtctttgaagtaaaagccaccgcaggaaacactcaccttgggggagaa |
13333529 |
T |
|
| Q |
101 |
gacttcgataacagaatggtgaattattttgttgaggagttcaaaaagaagaataacgtggacatcagtgggaatccaaaatccttaaggaggttgagaa |
200 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
13333530 |
gacttcgataacagaatggtgaactattttgttgaggagttcaaaaagaagaataacgtcgatatcagtgggaacccaaaatccttaaggaggttgagaa |
13333629 |
T |
|
| Q |
201 |
ctgcctgtgagagggcaaaaaggatactctctttttcttttgtcaccaccgttgaggtcgatgctttatttatgggaatcgacttttcttcatcaatcac |
300 |
Q |
| |
|
||||||||||||||| ||||||||||||||| ||||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13333630 |
ctgcctgtgagagggaaaaaaggatactctccttttcttttgtcaccactgttgaagtagatgctttatttatgggaatcgacttttcttcatcaatcac |
13333729 |
T |
|
| Q |
301 |
tcgtgccaaatttgaggaaattaatatagactttttcatcgagtgtatgaatattgttgacagt |
364 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13333730 |
tcgtgccaaatttgaggaaattaatatagactttttcatcgagtgtatgaatattgttgacagt |
13333793 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 1 - 362
Target Start/End: Complemental strand, 8667613 - 8667252
Alignment:
| Q |
1 |
tgatttgggtggtggtacttttgatgtgtctatcctcacaattaagggcgatgtctttgaagtaaaagccaccgcaggtaacactcaccttgggggagag |
100 |
Q |
| |
|
|||| ||||||| || |||||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||| ||||||||||||||||| ||| |
|
|
| T |
8667613 |
tgatctgggtggcgggacttttgatgtgtctatcctcacaattaagggtgatgtctttgaagtgaaagccactgcaggaaacactcaccttgggggcgag |
8667514 |
T |
|
| Q |
101 |
gacttcgataacagaatggtgaattattttgttgaggagttcaaaaagaagaataacgtggacatcagtgggaatccaaaatccttaaggaggttgagaa |
200 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||| |
|
|
| T |
8667513 |
gacttcgataacagaatggtgaactattttgttgaggagttaaaaaagaagaataaagtggacatcagtcagaacccaaaatccttaaggaggttgagaa |
8667414 |
T |
|
| Q |
201 |
ctgcctgtgagagggcaaaaaggatactctctttttcttttgtcaccaccgttgaggtcgatgctttatttatgggaatcgacttttcttcatcaatcac |
300 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||| ||||| |||||||| ||||||||||||| |||||||||||||| ||||||||| || |
|
|
| T |
8667413 |
ctgcctgtgagagggcaaaaaggatactctcttttgcttttgttaccactgttgaggtagatgctttatttacgggaatcgacttttgttcatcaattac |
8667314 |
T |
|
| Q |
301 |
tcgtgccaaatttgaggaaattaatatagactttttcatcgagtgtatgaatattgttgaca |
362 |
Q |
| |
|
|||||| |||||||||||| |||| || |||||||||| |||||||||||||| ||||||| |
|
|
| T |
8667313 |
tcgtgctaaatttgaggaacttaacatggactttttcaatgagtgtatgaatatagttgaca |
8667252 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 8 - 364
Target Start/End: Complemental strand, 8654637 - 8654281
Alignment:
| Q |
8 |
ggtggtggtacttttgatgtgtctatcctcacaattaagggcgatgtctttgaagtaaaagccaccgcaggtaacactcaccttgggggagaggacttcg |
107 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||| || || ||||| ||||| |||||||| ||||| | |
|
|
| T |
8654637 |
ggtggtggtacttttgatgtgtctatactcacaattaagggtgatgtctttgacgtaaaagccactgctggaaacacgcacctagggggagaagactttg |
8654538 |
T |
|
| Q |
108 |
ataacagaatggtgaattattttgttgaggagttcaaaaagaagaataacgtggacatcagtgggaatccaaaatccttaaggaggttgagaactgcctg |
207 |
Q |
| |
|
|||||||||||||| | || ||||| ||||||||||||||||||||||| ||||| || || || || |||||||||||||||||||||||||||||||| |
|
|
| T |
8654537 |
ataacagaatggtgtactactttgtagaggagttcaaaaagaagaataaagtggaaattagcggtaacccaaaatccttaaggaggttgagaactgcctg |
8654438 |
T |
|
| Q |
208 |
tgagagggcaaaaaggatactctctttttcttttgtcaccaccgttgaggtcgatgctttatttatgggaatcgacttttcttcatcaatcactcgtgcc |
307 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8654437 |
tgagagggcaaaaaggatactctcttttacttttgtcaccactgttgaggtagatgctttatttatgggaatcgacttttcttcatcaatcactcgtgct |
8654338 |
T |
|
| Q |
308 |
aaatttgaggaaattaatatagactttttcatcgagtgtatgaatattgttgacagt |
364 |
Q |
| |
|
|||||||||||||||||||| |||||||||| |||||||| ||||||||||||||| |
|
|
| T |
8654337 |
aaatttgaggaaattaatatggactttttcaatgagtgtatcaatattgttgacagt |
8654281 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 8 - 360
Target Start/End: Complemental strand, 8659550 - 8659198
Alignment:
| Q |
8 |
ggtggtggtacttttgatgtgtctatcctcacaattaagggcgatgtctttgaagtaaaagccaccgcaggtaacactcaccttgggggagaggacttcg |
107 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||| | || |||||||||||||| ||||||||||| | |
|
|
| T |
8659550 |
ggtggtggtacttttgatgtgtctatccttacaatgaagggtgatgtctttgaagtaaaagccacttctggaaacactcaccttggaggagaggactttg |
8659451 |
T |
|
| Q |
108 |
ataacagaatggtgaattattttgttgaggagttcaaaaagaagaataacgtggacatcagtgggaatccaaaatccttaaggaggttgagaactgcctg |
207 |
Q |
| |
|
||| |||||||||||| || ||||| ||||||||||||||||||||||| |||||||| ||||| || |||||||||||||||||||||||||||||||| |
|
|
| T |
8659450 |
atagcagaatggtgaactactttgtagaggagttcaaaaagaagaataaagtggacattagtggtaacccaaaatccttaaggaggttgagaactgcctg |
8659351 |
T |
|
| Q |
208 |
tgagagggcaaaaaggatactctctttttcttttgtcaccaccgttgaggtcgatgctttatttatgggaatcgacttttcttcatcaatcactcgtgcc |
307 |
Q |
| |
|
|||||||||||| |||| |||||||||| ||||||||||||| |||||||||||| |||||||| |||||| ||||| | ||||| ||||||||||||| |
|
|
| T |
8659350 |
tgagagggcaaagaggacactctcttttgcttttgtcaccactgttgaggtcgattctttatttcagggaatagacttctgttcattaatcactcgtgcc |
8659251 |
T |
|
| Q |
308 |
aaatttgaggaaattaatataga-ctttttcatcgagtgtatgaatattgttga |
360 |
Q |
| |
|
| ||||||||||| ||||| || |||||| || ||||||||||| | |||||| |
|
|
| T |
8659250 |
aggtttgaggaaatgaatatggatctttttaat-gagtgtatgaaaactgttga |
8659198 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 11 - 327
Target Start/End: Complemental strand, 1301644 - 1301328
Alignment:
| Q |
11 |
ggtggtacttttgatgtgtctatcctcacaattaagggcgatgtctttgaagtaaaagccaccgcaggtaacactcaccttgggggagaggacttcgata |
110 |
Q |
| |
|
|||||||||||||||||||||||||| || || ||||||||||||||||||||||||||||| | || || ||||||||||| ||||||||||| |||| |
|
|
| T |
1301644 |
ggtggtacttttgatgtgtctatccttaccatcaagggcgatgtctttgaagtaaaagccactggtggaaatactcaccttggaggagaggactttgata |
1301545 |
T |
|
| Q |
111 |
acagaatggtgaattattttgttgaggagttcaaaaagaagaataacgtggacatcagtgggaatccaaaatccttaaggaggttgagaactgcctgtga |
210 |
Q |
| |
|
| |||||||||| || ||||| |||||||||| |||||||||||| |||||||| ||||| || | |||||||||||||||||||||| ||| ||||| |
|
|
| T |
1301544 |
atagaatggtgagctactttgtagaggagttcagaaagaagaataaagtggacattagtggtaaccagaaatccttaaggaggttgagaattgcgtgtga |
1301445 |
T |
|
| Q |
211 |
gagggcaaaaaggatactctctttttcttttgtcaccaccgttgaggtcgatgctttatttatgggaatcgacttttcttcatcaatcactcgtgccaaa |
310 |
Q |
| |
|
|||||||||||||| |||||||||| |||| ||||||||||||||||||||| |||||||| |||||||||||| | ||||| ||||||||||||||| |
|
|
| T |
1301444 |
gagggcaaaaaggacactctcttttgctttagtcaccaccgttgaggtcgattctttatttcagggaatcgacttctgttcattaatcactcgtgccaag |
1301345 |
T |
|
| Q |
311 |
tttgaggaaattaatat |
327 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
1301344 |
tttgaggaaattaatat |
1301328 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 5 - 327
Target Start/End: Complemental strand, 3147454 - 3147132
Alignment:
| Q |
5 |
ttgggtggtggtacttttgatgtgtctatcctcacaattaagggcgatgtctttgaagtaaaagccaccgcaggtaacactcaccttgggggagaggact |
104 |
Q |
| |
|
||||||||||| ||||||||||||||| | || |||||||||| | |||||| |||| || |||| |||||| ||||| ||||||||||||||||||| |
|
|
| T |
3147454 |
ttgggtggtgggacttttgatgtgtctcttcttacaattaaggataaggtctttcaagttaaggccatcgcaggaaacacccaccttgggggagaggact |
3147355 |
T |
|
| Q |
105 |
tcgataacagaatggtgaattattttgttgaggagttcaaaaagaagaataacgtggacatcagtgggaatccaaaatccttaaggaggttgagaactgc |
204 |
Q |
| |
|
| ||||| || |||||||| || |||| |||||| || |||||||| || || ||||| |||| ||| ||| | ||||||||||||||| ||| || |
|
|
| T |
3147354 |
ttgataataggatggtgaactactttgcacgggagtttaagaagaagaacaaggtagacattagtgagaactcaagagccttaaggaggttgaaaacggc |
3147255 |
T |
|
| Q |
205 |
ctgtgagagggcaaaaaggatactctctttttcttttgtcaccaccgttgaggtcgatgctttatttatgggaatcgacttttcttcatcaatcactcgt |
304 |
Q |
| |
|
||||| || |||||| | ||||| |||||| || | |||||||| ||||| | ||| |||||||| |||| | ||||| | |||||||||||||||| |
|
|
| T |
3147254 |
gtgtgaaagagcaaaacgaatactatcttttgctgtcatcaccaccattgagatagattctttatttcagggatttgacttattttcatcaatcactcgt |
3147155 |
T |
|
| Q |
305 |
gccaaatttgaggaaattaatat |
327 |
Q |
| |
|
||||| ||||||||||| ||||| |
|
|
| T |
3147154 |
gccaagtttgaggaaatcaatat |
3147132 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 8 - 336
Target Start/End: Complemental strand, 17260428 - 17260100
Alignment:
| Q |
8 |
ggtggtggtacttttgatgtgtctatcctcacaattaagggcgatgtctttgaagtaaaagccaccgcaggtaacactcaccttgggggagaggacttcg |
107 |
Q |
| |
|
||||| || ||||||||||||||| || | |||||||||| | ||||| ||||| || ||||||| || ||||||| |||||||| |||||||| | |
|
|
| T |
17260428 |
ggtggggggacttttgatgtgtctctcgttacaattaaggataaggtcttcgaagttaaggccaccggtggagacactcatcttgggggtgaggactttg |
17260329 |
T |
|
| Q |
108 |
ataacagaatggtgaattattttgttgaggagttcaaaaagaagaataacgtggacatcagtgggaatccaaaatccttaaggaggttgagaactgcctg |
207 |
Q |
| |
|
|||| ||||||||| | |||||||| |||||| |||||| | ||| || ||||||| | |||||| |||||| |||||||||||||||||||||| || |
|
|
| T |
17260328 |
ataatagaatggtgtactattttgtagaggagatcaaaagaacgaaaaaattggacattattgggaacccaaaagccttaaggaggttgagaactgcatg |
17260229 |
T |
|
| Q |
208 |
tgagagggcaaaaaggatactctctttttcttttgtcaccaccgttgaggtcgatgctttatttatgggaatcgacttttcttcatcaatcactcgtgcc |
307 |
Q |
| |
|
||| | |||||||||| ||| |||||| | | ||| |||| |||||||| || |||||||||| ||| | | |||||||| ||||||||||||||| |
|
|
| T |
17260228 |
tgaaaaagcaaaaaggacactttcttttgcctctgtgaccaatgttgaggtagacgctttatttaagggtgttaatttttcttcgtcaatcactcgtgcc |
17260129 |
T |
|
| Q |
308 |
aaatttgaggaaattaatatagacttttt |
336 |
Q |
| |
|
|| ||||| ||||| ||||| ||| |||| |
|
|
| T |
17260128 |
aagtttgaagaaatcaatatggacctttt |
17260100 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 8 - 338
Target Start/End: Original strand, 27830856 - 27831186
Alignment:
| Q |
8 |
ggtggtggtacttttgatgtgtctatcctcacaattaagggcgatgtctttgaagtaaaagccaccgcaggtaacactcaccttgggggagaggacttcg |
107 |
Q |
| |
|
|||||||| ||||||||||||||| | | |||||||||| | ||||| |||| || || || || || |||||||||||||| ||||||||||| | |
|
|
| T |
27830856 |
ggtggtgggacttttgatgtgtctcttgttacaattaaggataaggtcttccaagttaaggcaactgctggaaacactcaccttggtggagaggactttg |
27830955 |
T |
|
| Q |
108 |
ataacagaatggtgaattattttgttgaggagttcaaaaagaagaataacgtggacatcagtgggaatccaaaatccttaaggaggttgagaactgcctg |
207 |
Q |
| |
|
|||| || |||||||| |||||||| |||| |||||| |||||||| | |||||||| |||||||| |||| | |||| |||||| ||||||| || |
|
|
| T |
27830956 |
ataataggatggtgaactattttgtggaggtgttcaagaagaagaaaagagtggacattagtgggaacccaagagccttgaggaggctgagaacctaatg |
27831055 |
T |
|
| Q |
208 |
tgagagggcaaaaaggatactctctttttcttttgtcaccaccgttgaggtcgatgctttatttatgggaatcgacttttcttcatcaatcactcgtgcc |
307 |
Q |
| |
|
||||| ||||||||||| ||||||||||||| ||| ||| || ||||| | ||||| |||||| ||| || ||||| | |||| ||||||||||| |
|
|
| T |
27831056 |
tgagaaggcaaaaaggacactctctttttctgttgacactactattgagatagatgccttatttgagggcattgacttcttttcaatgatcactcgtgca |
27831155 |
T |
|
| Q |
308 |
aaatttgaggaaattaatatagactttttca |
338 |
Q |
| |
|
|| ||||||||||| ||||| ||| |||||| |
|
|
| T |
27831156 |
aagtttgaggaaatcaatatggaccttttca |
27831186 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 8 - 336
Target Start/End: Complemental strand, 17268126 - 17267798
Alignment:
| Q |
8 |
ggtggtggtacttttgatgtgtctatcctcacaattaagggcgatgtctttgaagtaaaagccaccgcaggtaacactcaccttgggggagaggacttcg |
107 |
Q |
| |
|
|||||||| ||||||||||||||| || | |||||||||| | ||||| ||||| || ||||||| || ||||||| |||||||| |||||||| | |
|
|
| T |
17268126 |
ggtggtgggacttttgatgtgtctctcgttacaattaaggataaggtcttcgaagttaaggccaccggtggagacactcatcttgggggtgaggactttg |
17268027 |
T |
|
| Q |
108 |
ataacagaatggtgaattattttgttgaggagttcaaaaagaagaataacgtggacatcagtgggaatccaaaatccttaaggaggttgagaactgcctg |
207 |
Q |
| |
|
|||| |||||||| | |||||||||||||| |||||| ||| || || || | || |||||| |||||| || | ||||||||||||||||| || |
|
|
| T |
17268026 |
ataatagaatggtatactattttgttgaggaaatcaaaaggaaaaaaaaattgaaaattgttgggaacccaaaagccatgaggaggttgagaactgcatg |
17267927 |
T |
|
| Q |
208 |
tgagagggcaaaaaggatactctctttttcttttgtcaccaccgttgaggtcgatgctttatttatgggaatcgacttttcttcatcaatcactcgtgcc |
307 |
Q |
| |
|
||| | |||||||||| ||| ||||| | | ||| |||| |||||||| || |||||||||| ||| | || |||||||| ||||||||||||||| |
|
|
| T |
17267926 |
tgaaaaagcaaaaaggacactttctttcgcctctgtgaccaatgttgaggtagacgctttatttaagggtgttgatttttcttcgtcaatcactcgtgcc |
17267827 |
T |
|
| Q |
308 |
aaatttgaggaaattaatatagacttttt |
336 |
Q |
| |
|
|| ||||||||||| ||||| ||| |||| |
|
|
| T |
17267826 |
aagtttgaggaaatcaatatggacctttt |
17267798 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 8 - 315
Target Start/End: Complemental strand, 8647064 - 8646757
Alignment:
| Q |
8 |
ggtggtggtacttttgatgtgtctatcctcacaattaagggcgatgtctttgaagtaaaagccaccgcaggtaacactcaccttgggggagaggacttcg |
107 |
Q |
| |
|
|||||||| ||||||||||||||| |||| |||||||||| | |||||| | || ||||||||||| || ||||||||||| || ||||||||||| | |
|
|
| T |
8647064 |
ggtggtggaacttttgatgtgtctctccttacaattaaggataaggtctttcatgttaaagccaccgctggaaacactcacctcggaggagaggactttg |
8646965 |
T |
|
| Q |
108 |
ataacagaatggtgaattattttgttgaggagttcaaaaagaagaataacgtggacatcagtgggaatccaaaatccttaaggaggttgagaactgcctg |
207 |
Q |
| |
|
||| ||||||||| | | |||| | || || || |||||||| || |||||||| | ||| || ||| | ||||||||||||||||||| || || |
|
|
| T |
8646964 |
atagtagaatggtggaccactttgcacaagaatttaacaagaagaacaaggtggacattactggaaactcaagagccttaaggaggttgagaacggcatg |
8646865 |
T |
|
| Q |
208 |
tgagagggcaaaaaggatactctctttttcttttgtcaccaccgttgaggtcgatgctttatttatgggaatcgacttttcttcatcaatcactcgtgcc |
307 |
Q |
| |
|
||||| |||||||||| ||| |||||| ||| | ||||||| |||| | ||| ||||||||| || || |||||| ||||||||||||||||||| |
|
|
| T |
8646864 |
cgagagagcaaaaaggacactatcttttgcttcttgcaccaccattgaattagattctttatttaatggcattgactttatttcatcaatcactcgtgcc |
8646765 |
T |
|
| Q |
308 |
aaatttga |
315 |
Q |
| |
|
|||||||| |
|
|
| T |
8646764 |
aaatttga |
8646757 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 8 - 138
Target Start/End: Original strand, 8585687 - 8585817
Alignment:
| Q |
8 |
ggtggtggtacttttgatgtgtctatcctcacaattaagggcgatgtctttgaagtaaaagccaccgcaggtaacactcaccttgggggagaggacttcg |
107 |
Q |
| |
|
|||||||| ||||||||||||||| ||||||||||||| || |||||||||||||| ||||| ||||| || || |||||||||||||||| |||||| | |
|
|
| T |
8585687 |
ggtggtgggacttttgatgtgtctctcctcacaattaaaggtgatgtctttgaagttaaagcaaccgctggaaatactcaccttgggggaggggactttg |
8585786 |
T |
|
| Q |
108 |
ataacagaatggtgaattattttgttgagga |
138 |
Q |
| |
|
||||||||||| |||| || ||||||||||| |
|
|
| T |
8585787 |
ataacagaatgttgaactactttgttgagga |
8585817 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 8 - 118
Target Start/End: Complemental strand, 8628719 - 8628609
Alignment:
| Q |
8 |
ggtggtggtacttttgatgtgtctatcctcacaattaagggcgatgtctttgaagtaaaagccaccgcaggtaacactcaccttgggggagaggacttcg |
107 |
Q |
| |
|
|||||||| ||||||||||||||| ||||||||||||| || |||||||||||||| |||||||| || || || ||||||||||| ||||||||||| | |
|
|
| T |
8628719 |
ggtggtgggacttttgatgtgtctctcctcacaattaaaggtgatgtctttgaagttaaagccactgctggaaatactcaccttggtggagaggactttg |
8628620 |
T |
|
| Q |
108 |
ataacagaatg |
118 |
Q |
| |
|
||||||||||| |
|
|
| T |
8628619 |
ataacagaatg |
8628609 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 11 - 224
Target Start/End: Complemental strand, 8545817 - 8545604
Alignment:
| Q |
11 |
ggtggtacttttgatgtgtctatcctcacaattaagggcgatgtctttgaagtaaaagccaccgcaggtaacactcaccttgggggagaggacttcgata |
110 |
Q |
| |
|
||||| ||||||||||||||||| || |||||||| | |||||||| || || ||||| || || ||||| |||| || || || ||||| |||| |
|
|
| T |
8545817 |
ggtggaacttttgatgtgtctattcttacaattaaaaataaggtctttgatgtcaaggccactgctggagacacttacctaggcggtgaagactttgata |
8545718 |
T |
|
| Q |
111 |
acagaatggtgaattattttgttgaggagttcaaaaagaagaataacgtggacatcagtgggaatccaaaatccttaaggaggttgagaactgcctgtga |
210 |
Q |
| |
|
|||||||||||||||| ||||| |||||||||| | |||||| || | ||| || ||| |||| ||| || |||| ||||||||||||||||||||||| |
|
|
| T |
8545717 |
acagaatggtgaattactttgtgaaggagttcaagaggaagaacaatgaggatattagtcggaacccagaagccttgaggaggttgagaactgcctgtga |
8545618 |
T |
|
| Q |
211 |
gagggcaaaaagga |
224 |
Q |
| |
|
|| ||||||||||| |
|
|
| T |
8545617 |
gaaggcaaaaagga |
8545604 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 11 - 224
Target Start/End: Complemental strand, 8576510 - 8576297
Alignment:
| Q |
11 |
ggtggtacttttgatgtgtctatcctcacaattaagggcgatgtctttgaagtaaaagccaccgcaggtaacactcaccttgggggagaggacttcgata |
110 |
Q |
| |
|
||||| ||||||||||||||||| |||||| ||||| | ||||||| ||||| || ||||| || || |||||||||| || || | ||||| |||| |
|
|
| T |
8576510 |
ggtggaacttttgatgtgtctattctcacagttaagaacaatgtcttcgaagtcaaggccactgccggagacactcacctaggaggccaagactttgata |
8576411 |
T |
|
| Q |
111 |
acagaatggtgaattattttgttgaggagttcaaaaagaagaataacgtggacatcagtgggaatccaaaatccttaaggaggttgagaactgcctgtga |
210 |
Q |
| |
|
||| ||||||| || | |||||| ||||||||| || ||| | || | ||| || |||| |||| ||||| |||||||||||||||||||||| ||||| |
|
|
| T |
8576410 |
acataatggtggatcactttgttaaggagttcaggaacaagtacaaagaggatattagtgagaattcaaaagccttaaggaggttgagaactgcttgtga |
8576311 |
T |
|
| Q |
211 |
gagggcaaaaagga |
224 |
Q |
| |
|
| ||||||||||| |
|
|
| T |
8576310 |
aaaggcaaaaagga |
8576297 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 8 - 138
Target Start/End: Original strand, 8636324 - 8636454
Alignment:
| Q |
8 |
ggtggtggtacttttgatgtgtctatcctcacaattaagggcgatgtctttgaagtaaaagccaccgcaggtaacactcaccttgggggagaggacttcg |
107 |
Q |
| |
|
||||||||||| || || |||||||| |||| |||||| || || ||||||||||| |||||||| || || |||| |||||||| ||||||||||| | |
|
|
| T |
8636324 |
ggtggtggtacattcgacgtgtctatactcaaaattaaaggtgaagtctttgaagttaaagccactgccggagacacacaccttggaggagaggactttg |
8636423 |
T |
|
| Q |
108 |
ataacagaatggtgaattattttgttgagga |
138 |
Q |
| |
|
|||||||||||||| | |||||||| ||||| |
|
|
| T |
8636424 |
ataacagaatggtggaatattttgtagagga |
8636454 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 8 - 224
Target Start/End: Original strand, 29581822 - 29582038
Alignment:
| Q |
8 |
ggtggtggtacttttgatgtgtctatcctcacaattaagggcgatgtctttgaagtaaaagccaccgcaggtaacactcaccttgggggagaggacttcg |
107 |
Q |
| |
|
|||||||| ||||||||||||||| | |||||| | |||| ||| |||||||| || ||||| || || | |||||||| || ||||||||||| | |
|
|
| T |
29581822 |
ggtggtggcacttttgatgtgtctcttctcacactcaaggatgataagtttgaagtgaaggccactgctggcgatactcacctaggaggagaggactttg |
29581921 |
T |
|
| Q |
108 |
ataacagaatggtgaattattttgttgaggagttcaaaaagaagaataacgtggacatcagtgggaatccaaaatccttaaggaggttgagaactgcctg |
207 |
Q |
| |
|
||||| ||||||||||||| |||| | ||||| || | |||||| || ||||||| |||||||| |||||| | ||||||| | ||||||| || || |
|
|
| T |
29581922 |
ataaccgaatggtgaattactttgcgaatgagttgaagaggaagaacaatttggacattagtgggaacccaaaagctttaaggaagctgagaacagcttg |
29582021 |
T |
|
| Q |
208 |
tgagagggcaaaaagga |
224 |
Q |
| |
|
|||||||||||| |||| |
|
|
| T |
29582022 |
tgagagggcaaagagga |
29582038 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 8 - 327
Target Start/End: Complemental strand, 6789699 - 6789380
Alignment:
| Q |
8 |
ggtggtggtacttttgatgtgtctatcctcacaattaagggcgatgtctttgaagtaaaagccaccgcaggtaacactcaccttgggggagaggacttcg |
107 |
Q |
| |
|
|||||||| ||||| |||||||||||| | ||||| || | | ||||| |||| || ||||||| || ||||||||||| || ||||||||||| | |
|
|
| T |
6789699 |
ggtggtggcactttcgatgtgtctatcttaacaatcaaagataaggtcttccaagttaaggccaccggtggaaacactcacctcggaggagaggactttg |
6789600 |
T |
|
| Q |
108 |
ataacagaatggtgaattattttgttgaggagttcaaaaagaagaataacgtggacatcagtgggaatccaaaatccttaaggaggttgagaactgcctg |
207 |
Q |
| |
|
||||| || |||| || || |||| |||||||| || | |||||| || ||||| || | ||| || ||| ||||||| |||||||||||||| || |
|
|
| T |
6789599 |
ataaccgattggtaaactactttgcagaggagtttaagaggaagaacaaagtggatattactggaaactcaagggccttaagaaggttgagaactgcgtg |
6789500 |
T |
|
| Q |
208 |
tgagagggcaaaaaggatactctctttttcttttgtcaccaccgttgaggtcgatgctttatttatgggaatcgacttttcttcatcaatcactcgtgcc |
307 |
Q |
| |
|
||| ||||| |||||| ||||||||||| | | ||||| || ||||||| || |||||||| ||| |||||||| ||||||| | ||||| ||| |
|
|
| T |
6789499 |
tgaaagggccaaaagggtactctcttttgttgtcgtcactactattgaggtagactctttatttcagggcatcgacttcatttcatcacttactcgggcc |
6789400 |
T |
|
| Q |
308 |
aaatttgaggaaattaatat |
327 |
Q |
| |
|
|| ||||||||||| ||||| |
|
|
| T |
6789399 |
aagtttgaggaaatcaatat |
6789380 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 8 - 219
Target Start/End: Original strand, 29577653 - 29577864
Alignment:
| Q |
8 |
ggtggtggtacttttgatgtgtctatcctcacaattaagggcgatgtctttgaagtaaaagccaccgcaggtaacactcaccttgggggagaggacttcg |
107 |
Q |
| |
|
|||||||| || |||||||||||| | |||||| |||||| ||| ||||||||||| ||||| || ||| | |||||||| || ||||||||||||| |
|
|
| T |
29577653 |
ggtggtggcacctttgatgtgtctcttctcacacttaaggatgatagttttgaagtaaaggccactgctggtgatactcacctaggaggagaggacttcg |
29577752 |
T |
|
| Q |
108 |
ataacagaatggtgaattattttgttgaggagttcaaaaagaagaataacgtggacatcagtgggaatccaaaatccttaaggaggttgagaactgcctg |
207 |
Q |
| |
|
|||| | |||||||| | ||||| | ||||| || | |||||| || |||||||| ||| ||| |||||| | ||||||| | |||||||||| || |
|
|
| T |
29577753 |
ataataaaatggtgagccactttgtgaatgagttgaagaggaagaacaatgtggacattagtttgaacccaaaagctttaaggaagctgagaactgcttg |
29577852 |
T |
|
| Q |
208 |
tgagagggcaaa |
219 |
Q |
| |
|
|||||||||||| |
|
|
| T |
29577853 |
tgagagggcaaa |
29577864 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 11 - 224
Target Start/End: Complemental strand, 8570495 - 8570282
Alignment:
| Q |
11 |
ggtggtacttttgatgtgtctatcctcacaattaagggcgatgtctttgaagtaaaagccaccgcaggtaacactcaccttgggggagaggacttcgata |
110 |
Q |
| |
|
||||| ||||||||||||||||| |||||| |||||| | || |||||| || ||||| || || |||||||||| || || || || || |||| |
|
|
| T |
8570495 |
ggtggaacttttgatgtgtctattctcacagttaaggataacaactatgaagtcaaggccactgctggagacactcacctgggaggtgaagattttgata |
8570396 |
T |
|
| Q |
111 |
acagaatggtgaattattttgttgaggagttcaaaaagaagaataacgtggacatcagtgggaatccaaaatccttaaggaggttgagaactgcctgtga |
210 |
Q |
| |
|
|||||||| ||| | | ||||| || ||||||| |||||||| |||| ||| || ||| |||| |||||| |||| |||||||| ||||| || ||||| |
|
|
| T |
8570395 |
acagaatgttgactcactttgtgaagaagttcaagaagaagaacaacgaggatattagtaggaacccaaaagccttgaggaggttaagaacagcttgtga |
8570296 |
T |
|
| Q |
211 |
gagggcaaaaagga |
224 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
8570295 |
gagggcaaaaagga |
8570282 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 8 - 224
Target Start/End: Original strand, 8382857 - 8383073
Alignment:
| Q |
8 |
ggtggtggtacttttgatgtgtctatcctcacaattaagggcgatgtctttgaagtaaaagccaccgcaggtaacactcaccttgggggagaggacttcg |
107 |
Q |
| |
|
|||||||| ||||||||||||||| |||||||||||||| ||||||||| || || ||||| || || ||||||| || || || || ||||| | |
|
|
| T |
8382857 |
ggtggtggaacttttgatgtgtctctcctcacaattaagaataatgtctttgttgtgaaggccactgccggagacactcatctaggaggtgaagacttag |
8382956 |
T |
|
| Q |
108 |
ataacagaatggtgaattattttgttgaggagttcaaaaagaagaataacgtggacatcagtgggaatccaaaatccttaaggaggttgagaactgcctg |
207 |
Q |
| |
|
|||||||||| ||||| || |||||||| |||||||| | |||| |||| |||||| |||||||| ||||| | | || ||||| ||||| || || |
|
|
| T |
8382957 |
ataacagaatcgtgaagtactttgttgacgagttcaagaggaagcataataaggacattagtgggaacccaaaggctcttagaaggttaagaacggcttg |
8383056 |
T |
|
| Q |
208 |
tgagagggcaaaaagga |
224 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
8383057 |
cgagagggcaaaaagga |
8383073 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 224
Target Start/End: Original strand, 7877789 - 7877930
Alignment:
| Q |
83 |
actcaccttgggggagaggacttcgataacagaatggtgaattattttgttgaggagttcaaaaagaagaataacgtggacatcagtgggaatccaaaat |
182 |
Q |
| |
|
|||||||| || ||||||||||| |||||||||||| |||| |||| || |||||| || | ||||||||| |||||||| |||| || || | |
|
|
| T |
7877789 |
actcacctaggtggagaggactttgataacagaatgttgaaccatttagtgatggagtttaagaggaagaataaagtggacattggtggaaacccgaggg |
7877888 |
T |
|
| Q |
183 |
ccttaaggaggttgagaactgcctgtgagagggcaaaaagga |
224 |
Q |
| |
|
|| | ||||||||||||||||| ||||||||||| ||||||| |
|
|
| T |
7877889 |
cccttaggaggttgagaactgcatgtgagagggctaaaagga |
7877930 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 8 - 144
Target Start/End: Complemental strand, 8602161 - 8602025
Alignment:
| Q |
8 |
ggtggtggtacttttgatgtgtctatcctcacaattaagggcgatgtctttgaagtaaaagccaccgcaggtaacactcaccttgggggagaggacttcg |
107 |
Q |
| |
|
|||||||| ||||||||||| ||| | |||||||||||| || |||||||||| || ||||| | || |||| |||||||| ||||||||||| | |
|
|
| T |
8602161 |
ggtggtggaacttttgatgtttctcttctcacaattaagaataatctctttgaagtcaaggccacttccggagacacacaccttggaggagaggactttg |
8602062 |
T |
|
| Q |
108 |
ataacagaatggtgaattattttgttgaggagttcaa |
144 |
Q |
| |
|
||||| |||||||||| | |||||| ||||||||| |
|
|
| T |
8602061 |
ataaccgaatggtgaaccactttgttatggagttcaa |
8602025 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 123
Target Start/End: Complemental strand, 8559520 - 8559405
Alignment:
| Q |
8 |
ggtggtggtacttttgatgtgtctatcctcacaattaagggcgatgtctttgaagtaaaagccaccgcaggtaacactcaccttgggggagaggacttcg |
107 |
Q |
| |
|
|||||||| ||||||||||| ||| | |||||||||||| || |||||||||| || ||||| | || |||| ||||| || ||||||||||| | |
|
|
| T |
8559520 |
ggtggtggaacttttgatgtttctcttctcacaattaagaataatctctttgaagtcaaggccacttccggagacacacacctcggaggagaggactttg |
8559421 |
T |
|
| Q |
108 |
ataacagaatggtgaa |
123 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
8559420 |
ataacagaatggtgaa |
8559405 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 120
Target Start/End: Complemental strand, 8590825 - 8590713
Alignment:
| Q |
8 |
ggtggtggtacttttgatgtgtctatcctcacaattaagggcgatgtctttgaagtaaaagccaccgcaggtaacactcaccttgggggagaggacttcg |
107 |
Q |
| |
|
|||||||| ||||||||||||||| | |||||| | || || ||| |||||| ||||||||||| | || | || ||||| || ||||||||||| | |
|
|
| T |
8590825 |
ggtggtggcacttttgatgtgtctcttctcacactcaaaggtgatagctttgatgtaaaagccacttccggagatacccacctaggaggagaggactttg |
8590726 |
T |
|
| Q |
108 |
ataacagaatggt |
120 |
Q |
| |
|
||||||||||||| |
|
|
| T |
8590725 |
ataacagaatggt |
8590713 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 151
Target Start/End: Complemental strand, 8610029 - 8609961
Alignment:
| Q |
83 |
actcaccttgggggagaggacttcgataacagaatggtgaattattttgttgaggagttcaaaaagaag |
151 |
Q |
| |
|
||||||||||| ||||||||||| ||| |||||||||| ||| | ||||| |||||||||||| |||| |
|
|
| T |
8610029 |
actcaccttggaggagaggactttgatcacagaatggttaatcactttgtgaaggagttcaaaaggaag |
8609961 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 348
Target Start/End: Complemental strand, 8616598 - 8616528
Alignment:
| Q |
278 |
atcgacttttcttcatcaatcactcgtgccaaatttgaggaaattaatatagactttttcatcgagtgtat |
348 |
Q |
| |
|
||||| || ||||||||||||||||||| || ||||||||||| ||||| ||| |||| | ||||||||| |
|
|
| T |
8616598 |
atcgatttctcttcatcaatcactcgtgttaagtttgaggaaatcaatatggacctttttaacgagtgtat |
8616528 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 8102861 - 8102832
Alignment:
| Q |
1 |
tgatttgggtggtggtacttttgatgtgtc |
30 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
8102861 |
tgatttgggtggtggtacttttgatgtgtc |
8102832 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 360
Target Start/End: Original strand, 8585958 - 8586039
Alignment:
| Q |
279 |
tcgacttttcttcatcaatcactcgtgccaaatttgaggaaattaatatagactttttcatcgagtgtatgaatattgttga |
360 |
Q |
| |
|
|||| || |||||||||||||| |||| ||| ||||||||||| ||||| ||| |||| | |||||||| |||| |||||| |
|
|
| T |
8585958 |
tcgatttctcttcatcaatcacgcgtgtcaagtttgaggaaatcaatatggacctttttaatgagtgtataaatactgttga |
8586039 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 238; Significance: 1e-131; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 1 - 362
Target Start/End: Original strand, 9335865 - 9336226
Alignment:
| Q |
1 |
tgatttgggtggtggtacttttgatgtgtctatcctcacaattaagggcgatgtctttgaagtaaaagccaccgcaggtaacactcaccttgggggagag |
100 |
Q |
| |
|
|||| ||||||| ||||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||||||||| ||||| |||||||| || ||| |
|
|
| T |
9335865 |
tgatctgggtggcggtacttttgatgtgtctatcctcacaattaagggtgatctatttgaagtaaaagccaccgcaggaaacacgcaccttggaggcgag |
9335964 |
T |
|
| Q |
101 |
gacttcgataacagaatggtgaattattttgttgaggagttcaaaaagaagaataacgtggacatcagtgggaatccaaaatccttaaggaggttgagaa |
200 |
Q |
| |
|
||||| |||||||||||||| || |||||||| || ||||| |||||||||||||| |||||||||| ||| ||||||||||||||||||||||||| |
|
|
| T |
9335965 |
gactttgataacagaatggttaactattttgtggaagagttaaaaaagaagaataaagtggacatcaagcagaacccaaaatccttaaggaggttgagaa |
9336064 |
T |
|
| Q |
201 |
ctgcctgtgagagggcaaaaaggatactctctttttcttttgtcaccaccgttgaggtcgatgctttatttatgggaatcgacttttcttcatcaatcac |
300 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||| ||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9336065 |
ctgcctgtgagagggcaaaaaggatactgtcttttgcttttgttaccactgttgaggtagatgctttatttatgggaatcgacttttcttcatcaatcac |
9336164 |
T |
|
| Q |
301 |
tcgtgccaaatttgaggaaattaatatagactttttcatcgagtgtatgaatattgttgaca |
362 |
Q |
| |
|
||||||||||||||||||| |||| || |||||||||| |||||||||||||||||||||| |
|
|
| T |
9336165 |
tcgtgccaaatttgaggaacttaacatggactttttcaatgagtgtatgaatattgttgaca |
9336226 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 8 - 336
Target Start/End: Complemental strand, 30775439 - 30775111
Alignment:
| Q |
8 |
ggtggtggtacttttgatgtgtctatcctcacaattaagggcgatgtctttgaagtaaaagccaccgcaggtaacactcaccttgggggagaggacttcg |
107 |
Q |
| |
|
|||||||| ||||||||||||||| | ||||| |||| | ||||| |||||||| ||||| || || || ||||||||| | |||||||||||||| | |
|
|
| T |
30775439 |
ggtggtgggacttttgatgtgtctcttctcaccattagagatgatgtgtttgaagttaaagcaactgctggaaacactcacatcgggggagaggactttg |
30775340 |
T |
|
| Q |
108 |
ataacagaatggtgaattattttgttgaggagttcaaaaagaagaataacgtggacatcagtgggaatccaaaatccttaaggaggttgagaactgcctg |
207 |
Q |
| |
|
||||||||||| ||||||| ||||| ||||| || || | |||||| ||||||||||| | |||||||||| | | || || |||||||||||| || |
|
|
| T |
30775339 |
ataacagaatgttgaattactttgtagaggaatttaagacgaagaacaacgtggacattaccgggaatccaagagctttgagacagttgagaactgcatg |
30775240 |
T |
|
| Q |
208 |
tgagagggcaaaaaggatactctctttttcttttgtcaccaccgttgaggtcgatgctttatttatgggaatcgacttttcttcatcaatcactcgtgcc |
307 |
Q |
| |
|
||| | ||||||||||| |||||| || ||| |||| |||||| | ||| ||||||| | || ||||||||||||||||||||||||| | |
|
|
| T |
30775239 |
tgaaaaggcaaaaaggacactctccttcaagtttctcacatttgttgagatagataatttatttcaagacattgacttttcttcatcaatcactcgtgtc |
30775140 |
T |
|
| Q |
308 |
aaatttgaggaaattaatatagacttttt |
336 |
Q |
| |
|
|| ||||||||||| ||||| ||| |||| |
|
|
| T |
30775139 |
aagtttgaggaaatcaatatggacctttt |
30775111 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 186
Target Start/End: Complemental strand, 35132635 - 35132457
Alignment:
| Q |
8 |
ggtggtggtacttttgatgtgtctatcctcacaattaagggcgatgtctttgaagtaaaagccaccgcaggtaacactcaccttgggggagaggacttcg |
107 |
Q |
| |
|
|||||||| ||||||||||| || || || || ||||||| ||||||| |||| || ||||| || || |||||||| || || ||||||||||| | |
|
|
| T |
35132635 |
ggtggtggcacttttgatgtttcaatacttactattaaggataatgtcttccaagttaaggccactgccggaaacactcatctcggtggagaggactttg |
35132536 |
T |
|
| Q |
108 |
ataacagaatggtgaattattttgttgaggagttcaaaaagaagaataacgtggacatcagtgggaatccaaaatcctt |
186 |
Q |
| |
|
|||||||||||||||| || ||||| | |||||||| | ||||| || || ||||| ||||||||| ||||| |||| |
|
|
| T |
35132535 |
ataacagaatggtgaactactttgtacaagagttcaagagaaagaacaaagtagacattagtgggaattcaaaagcctt |
35132457 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 353
Target Start/End: Complemental strand, 35132368 - 35132299
Alignment:
| Q |
284 |
ttttcttcatcaatcactcgtgccaaatttgaggaaattaatatagactttttcatcgagtgtatgaata |
353 |
Q |
| |
|
|||||||||||||||| ||| ||||| ||||||||||| ||| |||| |||| | ||||||||||||| |
|
|
| T |
35132368 |
ttttcttcatcaatcaatcgcgccaagtttgaggaaatgaatgcagacctttttaatgagtgtatgaata |
35132299 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 190; Significance: 1e-103; HSPs: 10)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 11 - 360
Target Start/End: Original strand, 16657501 - 16657850
Alignment:
| Q |
11 |
ggtggtacttttgatgtgtctatcctcacaattaagggcgatgtctttgaagtaaaagccaccgcaggtaacactcaccttgggggagaggacttcgata |
110 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||| ||||| ||||| ||||||||||| || || |||||||||||||||||||||||||| |||| |
|
|
| T |
16657501 |
ggtggtacttttgatgtgtctatccttacaattaagggtgatgtttttgaggtaaaagccactgccggaaacactcaccttgggggagaggactttgata |
16657600 |
T |
|
| Q |
111 |
acagaatggtgaattattttgttgaggagttcaaaaagaagaataacgtggacatcagtgggaatccaaaatccttaaggaggttgagaactgcctgtga |
210 |
Q |
| |
|
|||||| |||||| || ||||| |||||||| ||||||||||||| |||||||| |||||||| ||| | |||| ||||||||||||||||| ||||| |
|
|
| T |
16657601 |
acagaacggtgaactactttgtagaggagtttcaaaagaagaataaggtggacataagtgggaactcaagagccttgaggaggttgagaactgcatgtga |
16657700 |
T |
|
| Q |
211 |
gagggcaaaaaggatactctctttttcttttgtcaccaccgttgaggtcgatgctttatttatgggaatcgacttttcttcatcaatcactcgtgccaaa |
310 |
Q |
| |
|
||||||||| |||| |||||||||| ||||||||||||| |||||||| ||| |||||||| |||||| |||||||||||||||||||| |||||||| |
|
|
| T |
16657701 |
gagggcaaagaggacactctcttttgcttttgtcaccactgttgaggtagattctttatttcagggaattgacttttcttcatcaatcacccgtgccaag |
16657800 |
T |
|
| Q |
311 |
tttgaggaaattaatatagactttttcatcgagtgtatgaatattgttga |
360 |
Q |
| |
|
||||||||||||||||| || |||||| ||||||||||| | |||||| |
|
|
| T |
16657801 |
tttgaggaaattaatatggatcttttcaatgagtgtatgaaaactgttga |
16657850 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 8 - 360
Target Start/End: Complemental strand, 14703595 - 14703243
Alignment:
| Q |
8 |
ggtggtggtacttttgatgtgtctatcctcacaattaagggcgatgtctttgaagtaaaagccaccgcaggtaacactcaccttgggggagaggacttcg |
107 |
Q |
| |
|
||||||||||||||||| |||||| |||| |||||||||||| ||||| || | || || || || || ||||||||||| |||||||||||||||| |
|
|
| T |
14703595 |
ggtggtggtacttttgacgtgtctctcctaacaattaagggcaccgtcttccaaattaaggctactgctggaaacactcacctcgggggagaggacttcg |
14703496 |
T |
|
| Q |
108 |
ataacagaatggtgaattattttgttgaggagttcaaaaagaagaataacgtggacatcagtgggaatccaaaatccttaaggaggttgagaactgcctg |
207 |
Q |
| |
|
|||||||||||||||| || |||||| | |||||||| | || || | ||||||| ||||| ||||||||| |||||||||| |||||||| || || |
|
|
| T |
14703495 |
ataacagaatggtgaactactttgttcaagagttcaagagaaaaaacagattggacattagtggaaatccaaaagccttaaggagcttgagaaccgcttg |
14703396 |
T |
|
| Q |
208 |
tgagagggcaaaaaggatactctctttttcttttgtcaccaccgttgaggtcgatgctttatttatgggaatcgacttttcttcatcaatcactcgtgcc |
307 |
Q |
| |
|
|||||||||||||| | ||| ||||| ||||| |||| ||||||| |||||||||||| | || |||||||||||||| |||| | | ||| |
|
|
| T |
14703395 |
cgagagggcaaaaagaacactttctttccaagttgtcgccactattgaggtagatgctttatttcaatgcattgacttttcttcatcgatcaatagggcc |
14703296 |
T |
|
| Q |
308 |
aaatttgaggaaattaatatagactttttcatcgagtgtatgaatattgttga |
360 |
Q |
| |
|
|| ||||| ||||| ||||| |||||||| | |||||| |||| |||||||| |
|
|
| T |
14703295 |
aagtttgaagaaatgaatatggacttttttaatgagtgtgtgaagattgttga |
14703243 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 8 - 234
Target Start/End: Original strand, 16661973 - 16662199
Alignment:
| Q |
8 |
ggtggtggtacttttgatgtgtctatcctcacaattaagggcgatgtctttgaagtaaaagccaccgcaggtaacactcaccttgggggagaggacttcg |
107 |
Q |
| |
|
|||||||| ||||||||||||||| ||||||||||||| || |||||||||||||| |||||||| | || ||||||||||| |||||||||||||| | |
|
|
| T |
16661973 |
ggtggtgggacttttgatgtgtctctcctcacaattaaaggtgatgtctttgaagttaaagccacttctggaaacactcacctcgggggagaggactttg |
16662072 |
T |
|
| Q |
108 |
ataacagaatggtgaattattttgttgaggagttcaaaaagaagaataacgtggacatcagtgggaatccaaaatccttaaggaggttgagaactgcctg |
207 |
Q |
| |
|
||||||||||| |||| || ||||| | || || || | |||||| || ||||| |||| | ||||||||| | |||| ||||||||||||||| | || |
|
|
| T |
16662073 |
ataacagaatgttgaactactttgtgaaagaatttaataggaagaacaaagtggatatcactaggaatccaagagccttgaggaggttgagaacttcttg |
16662172 |
T |
|
| Q |
208 |
tgagagggcaaaaaggatactctcttt |
234 |
Q |
| |
|
||| | ||| ||||||| ||||||||| |
|
|
| T |
16662173 |
tgaaaaggcgaaaaggacactctcttt |
16662199 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 11 - 360
Target Start/End: Complemental strand, 12234873 - 12234524
Alignment:
| Q |
11 |
ggtggtacttttgatgtgtctatcctcacaattaagggcgatgtctttgaagtaaaagccaccgcaggtaacactcaccttgggggagaggacttcgata |
110 |
Q |
| |
|
||||| ||||||||||||||| |||| ||||| || || ||||||| |||| |||||||| || || ||||||||||| |||||||||||||| |||| |
|
|
| T |
12234873 |
ggtggcacttttgatgtgtctctcctaacaatcaaaggtaatgtcttccaagttaaagccacagccggaaacactcacctcgggggagaggactttgata |
12234774 |
T |
|
| Q |
111 |
acagaatggtgaattattttgttgaggagttcaaaaagaagaataacgtggacatcagtgggaatccaaaatccttaaggaggttgagaactgcctgtga |
210 |
Q |
| |
|
|||||||||| || || ||| | | |||||||| | ||||| || |||||||| ||||| ||||||||| |||| |||||||| |||||||| ||||| |
|
|
| T |
12234773 |
acagaatggtaaactaccttgctcaagagttcaatagaaagaaaaaagtggacatgagtggaaatccaaaagccttgaggaggttaagaactgcttgtga |
12234674 |
T |
|
| Q |
211 |
gagggcaaaaaggatactctctttttcttttgtcaccaccgttgaggtcgatgctttatttatgggaatcgacttttcttcatcaatcactcgtgccaaa |
310 |
Q |
| |
|
|||||||||||| | | ||||| | |||| | ||| ||||||| ||| |||||||| || || || ||||||||||| |||| | | ||||| |
|
|
| T |
12234673 |
gagggcaaaaagatcattgtctttccttgttgttgcaaccattgaggtagattctttatttgaaggcattgatttttcttcatcgatcaatagggccaag |
12234574 |
T |
|
| Q |
311 |
tttgaggaaattaatatagactttttcatcgagtgtatgaatattgttga |
360 |
Q |
| |
|
||||||||||| ||||| || || | || ||||||||||| |||||||| |
|
|
| T |
12234573 |
tttgaggaaatgaatatggatcttcttattgagtgtatgaagattgttga |
12234524 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 11 - 359
Target Start/End: Complemental strand, 7542410 - 7542062
Alignment:
| Q |
11 |
ggtggtacttttgatgtgtctatcctcacaattaagggcgatgtctttgaagtaaaagccaccgcaggtaacactcaccttgggggagaggacttcgata |
110 |
Q |
| |
|
||||| ||||||||||||||| | || || ||||||||| | ||| |||| || ||||| || || |||||||||||||| ||||| ||||| |||| |
|
|
| T |
7542410 |
ggtggcacttttgatgtgtctttactaacgattaagggcaacaacttccaagttaaggccactgctggcaacactcaccttggtggagaagactttgata |
7542311 |
T |
|
| Q |
111 |
acagaatggtgaattattttgttgaggagttcaaaaagaagaataacgtggacatcagtgggaatccaaaatccttaaggaggttgagaactgcctgtga |
210 |
Q |
| |
|
| ||||||| ||| || ||||| | |||||||| | ||||| || |||||||| ||||||||||||||| |||| ||||||||||||||||| ||||| |
|
|
| T |
7542310 |
atagaatggcgaactactttgtacaagagttcaagagaaagaacaaagtggacattagtgggaatccaaaagccttgaggaggttgagaactgcttgtga |
7542211 |
T |
|
| Q |
211 |
gagggcaaaaaggatactctctttttcttttgtcaccaccgttgaggtcgatgctttatttatgggaatcgacttttcttcatcaatcactcgtgccaaa |
310 |
Q |
| |
|
|||||||||||| ||| ||||| | |||| |||| ||||||| ||| |||||||| || || |||||||||||||| |||| | | ||||| |
|
|
| T |
7542210 |
gagggcaaaaagatcactttctttccttgttgttgccactattgaggtagattctttatttcaaggcattgacttttcttcatcgatcaatagggccaag |
7542111 |
T |
|
| Q |
311 |
tttgaggaaattaatatagactttttcatcgagtgtatgaatattgttg |
359 |
Q |
| |
|
|||||||| || ||||| || |||| | ||||||||||| ||||||| |
|
|
| T |
7542110 |
tttgaggagatgaatatggatctttttaacgagtgtatgacgattgttg |
7542062 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 8 - 351
Target Start/End: Complemental strand, 43625599 - 43625256
Alignment:
| Q |
8 |
ggtggtggtacttttgatgtgtctatcctcacaattaagggcgatgtctttgaagtaaaagccaccgcaggtaacactcaccttgggggagaggacttcg |
107 |
Q |
| |
|
|||||||||||||||||||||||||| || |||||||||| | | ||||| || |||||||| || || |||||||||||||| ||||||||||| | |
|
|
| T |
43625599 |
ggtggtggtacttttgatgtgtctatacttacaattaaggacaaggtcttccgtgttaaagccactgctggaaacactcaccttggaggagaggactttg |
43625500 |
T |
|
| Q |
108 |
ataacagaatggtgaattattttgttgaggagttcaaaaagaagaataacgtggacatcagtgggaatccaaaatccttaaggaggttgagaactgcctg |
207 |
Q |
| |
|
|| | ||||||||||| || |||| || || || | |||||||| || ||||| || | ||| || ||| | || |||| ||||||||||| || || |
|
|
| T |
43625499 |
atgatagaatggtgaactactttgcagaagaatttgagaagaagaacaatgtggatattattggaaactcaagagccataagaaggttgagaacggcatg |
43625400 |
T |
|
| Q |
208 |
tgagagggcaaaaaggatactctctttttcttttgtcaccaccgttgaggtcgatgctttatttatgggaatcgacttttcttcatcaatcactcgtgcc |
307 |
Q |
| |
|
||||| | |||||||| ||| |||||| ||| ||| ||| ||||||| ||| ||||||| || || ||||| | ||||||||||||||||||| |
|
|
| T |
43625399 |
cgagagaggaaaaaggacactgtcttttgcttcgttcagcactattgaggtagattctttattccgtggtattgacttcttttcatcaatcactcgtgcc |
43625300 |
T |
|
| Q |
308 |
aaatttgaggaaattaatatagactttttcatcgagtgtatgaa |
351 |
Q |
| |
|
|||||||| ||||| ||||| || |||||| ||||||| |||| |
|
|
| T |
43625299 |
aaatttgatgaaataaatatggatcttttcaacgagtgtttgaa |
43625256 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 8 - 222
Target Start/End: Original strand, 12258562 - 12258776
Alignment:
| Q |
8 |
ggtggtggtacttttgatgtgtctatcctcacaattaagggcgatgtctttgaagtaaaagccaccgcaggtaacactcaccttgggggagaggacttcg |
107 |
Q |
| |
|
|||||||| ||||||||||||||| | || || ||||||| |||||||| |||| || || || || || ||||| |||||||| ||||||||||| | |
|
|
| T |
12258562 |
ggtggtggcacttttgatgtgtctctactaaccattaaggataatgtctttcaagttaaggctacagctggaaacacgcaccttggaggagaggactttg |
12258661 |
T |
|
| Q |
108 |
ataacagaatggtgaattattttgttgaggagttcaaaaagaagaataacgtggacatcagtgggaatccaaaatccttaaggaggttgagaactgcctg |
207 |
Q |
| |
|
|||| |||||||||| ||| ||||| || |||||||| | ||||| || || || || ||||| ||||||| | | || ||||| |||| ||| || || |
|
|
| T |
12258662 |
ataatagaatggtgagttactttgtagaagagttcaagagaaagaacaaagtagatataagtggaaatccaagagctttgaggagattgaaaacagcttg |
12258761 |
T |
|
| Q |
208 |
tgagagggcaaaaag |
222 |
Q |
| |
|
|||||| |||||||| |
|
|
| T |
12258762 |
tgagagtgcaaaaag |
12258776 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 228
Target Start/End: Original strand, 12245387 - 12245607
Alignment:
| Q |
8 |
ggtggtggtacttttgatgtgtctatcctcacaattaagggcgatgtctttgaagtaaaagccaccgcaggtaacactcaccttgggggagaggacttcg |
107 |
Q |
| |
|
|||||||| |||||||| || |||||||| || ||||||| | |||| |||| || ||||| || || |||||||||||||| |||||||| || | |
|
|
| T |
12245387 |
ggtggtggcacttttgacgtttctatcctaactattaaggataacatcttccaagttaaggccactgctggaaacactcaccttggaggagaggattttg |
12245486 |
T |
|
| Q |
108 |
ataacagaatggtgaattattttgttgaggagttcaaaaagaagaataacgtggacatcagtgggaatccaaaatccttaaggaggttgagaactgcctg |
207 |
Q |
| |
|
|||| |||||||| || || |||| |||||||||| | ||||| || |||| || |||| | | ||||| |||| ||||| ||||||||||| || |
|
|
| T |
12245487 |
ataatagaatggtaaactactttgcacaggagttcaagagaaagaacaaattggatattagtgcaagttcaaaagccttgaggagattgagaactgcttg |
12245586 |
T |
|
| Q |
208 |
tgagagggcaaaaaggatact |
228 |
Q |
| |
|
||||||||||||||| ||||| |
|
|
| T |
12245587 |
tgagagggcaaaaagaatact |
12245607 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 11999425 - 11999374
Alignment:
| Q |
177 |
caaaatccttaaggaggttgagaactgcctgtgagagggcaaaaaggatact |
228 |
Q |
| |
|
||||| |||| ||||||||||||||||| ||||||||||||||||| ||||| |
|
|
| T |
11999425 |
caaaagccttgaggaggttgagaactgcttgtgagagggcaaaaagaatact |
11999374 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 108 - 216
Target Start/End: Original strand, 17666764 - 17666872
Alignment:
| Q |
108 |
ataacagaatggtgaattattttgttgaggagttcaaaaagaagaataacgtggacatcagtgggaatccaaaatccttaaggaggttgagaactgcctg |
207 |
Q |
| |
|
||||||||||||||||| | |||||| | |||||||||| ||||| ||| |||||||||||| || |||| | | | | ||||||| | ||||| || |
|
|
| T |
17666764 |
ataacagaatggtgaatcactttgttcaagagttcaaaagaaagaacaacaaggacatcagtggcaacccaagagctcttatgaggttggggactgcttg |
17666863 |
T |
|
| Q |
208 |
tgagagggc |
216 |
Q |
| |
|
||||||||| |
|
|
| T |
17666864 |
tgagagggc |
17666872 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 178; Significance: 6e-96; HSPs: 5)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 8 - 349
Target Start/End: Original strand, 4678539 - 4678879
Alignment:
| Q |
8 |
ggtggtggtacttttgatgtgtctatcctcacaattaagggcgatgtctttgaagtaaaagccaccgcaggtaacactcaccttgggggagaggacttcg |
107 |
Q |
| |
|
||||||||||||||||||||||||||||| | ||| ||||| | ||||||||||||||||||||| || || ||||||||||| || ||||||||||| | |
|
|
| T |
4678539 |
ggtggtggtacttttgatgtgtctatccttaaaatcaagggtggtgtctttgaagtaaaagccactgctggaaacactcacctaggtggagaggactttg |
4678638 |
T |
|
| Q |
108 |
ataacagaatggtgaattattttgttgaggagttcaaaaagaagaataacgtggacatcagtgggaatccaaaatccttaaggaggttgagaactgcctg |
207 |
Q |
| |
|
|||||||||||||||| || ||||| ||||||||||||||||||||||| |||||||| ||| ||| ||||| ||||||||||||||||||||||||| |
|
|
| T |
4678639 |
ataacagaatggtgaactactttgtagaggagttcaaaaagaagaataatgtggacattagtaagaacgcaaaacccttaaggaggttgagaactgcctg |
4678738 |
T |
|
| Q |
208 |
tgagagggcaaaaaggatactctctttttcttttgtcaccaccgttgaggtcgatgctttatttatgggaatcgacttttcttcatcaatcactcgtgcc |
307 |
Q |
| |
|
||||||||||| |||| ||||||||| | ||||||||||| ||||| || ||| |||||||| |||||| |||||||||||||| || ||||||||| |
|
|
| T |
4678739 |
cgagagggcaaagaggacactctctttcgcctttgtcaccactgttga-gtagattctttatttcagggaatagacttttcttcatctattactcgtgcc |
4678837 |
T |
|
| Q |
308 |
aaatttgaggaaattaatatagactttttcatcgagtgtatg |
349 |
Q |
| |
|
|| ||||||||||||||||| ||| |||||| |||||||||| |
|
|
| T |
4678838 |
aagtttgaggaaattaatatggaccttttcaacgagtgtatg |
4678879 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 8 - 336
Target Start/End: Complemental strand, 15595221 - 15594893
Alignment:
| Q |
8 |
ggtggtggtacttttgatgtgtctatcctcacaattaagggcgatgtctttgaagtaaaagccaccgcaggtaacactcaccttgggggagaggacttcg |
107 |
Q |
| |
|
|||||||| |||||||||||||||||||| |||||||||| | | ||||| |||| || ||||| | || |||||||||||||| ||||||||||| | |
|
|
| T |
15595221 |
ggtggtggcacttttgatgtgtctatcctaacaattaaggacaaggtcttccaagttaaggccacaggcggaaacactcaccttggaggagaggactttg |
15595122 |
T |
|
| Q |
108 |
ataacagaatggtgaattattttgttgaggagttcaaaaagaagaataacgtggacatcagtgggaatccaaaatccttaaggaggttgagaactgcctg |
207 |
Q |
| |
|
||||||||||||| || || |||| |||| ||||| | |||||| || ||||| || | |||||| |||| |||| ||||| ||||||||||| || |
|
|
| T |
15595121 |
ataacagaatggtcaactactttgcgcaggaattcaagacgaagaacaaagtggatattactgggaacccaagggccttgaggagattgagaactgcgtg |
15595022 |
T |
|
| Q |
208 |
tgagagggcaaaaaggatactctctttttcttttgtcaccaccgttgaggtcgatgctttatttatgggaatcgacttttcttcatcaatcactcgtgcc |
307 |
Q |
| |
|
|| |||||||||||| ||||||||||| || |||||| ||| ||||||| ||| |||||||| || || ||||| | |||||| | |||||| || |
|
|
| T |
15595021 |
cgaaagggcaaaaagggtactctcttttactactgtcactaccattgaggtagattgtttatttaacggtattgacttcttttcatcggttactcgttcc |
15594922 |
T |
|
| Q |
308 |
aaatttgaggaaattaatatagacttttt |
336 |
Q |
| |
|
|| ||||| ||||| || || |||||||| |
|
|
| T |
15594921 |
aagtttgaagaaatcaacatggacttttt |
15594893 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 119
Target Start/End: Original strand, 34466774 - 34466885
Alignment:
| Q |
8 |
ggtggtggtacttttgatgtgtctatcctcacaattaagggcgatgtctttgaagtaaaagccaccgcaggtaacactcaccttgggggagaggacttcg |
107 |
Q |
| |
|
|||||||| ||||||||||||||| |||| |||||||||| ||||||||||||| || ||||| | |||||||||||||| || |||||||||| | |
|
|
| T |
34466774 |
ggtggtgggacttttgatgtgtctctccttacaattaaggataatgtctttgaagttaaggccacttctggtaacactcacctcggacgagaggactttg |
34466873 |
T |
|
| Q |
108 |
ataacagaatgg |
119 |
Q |
| |
|
|||| ||||||| |
|
|
| T |
34466874 |
ataatagaatgg |
34466885 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 333
Target Start/End: Original strand, 34467047 - 34467091
Alignment:
| Q |
289 |
ttcatcaatcactcgtgccaaatttgaggaaattaatatagactt |
333 |
Q |
| |
|
||| ||||||||||||||||| ||||||||||| ||||| ||||| |
|
|
| T |
34467047 |
ttcgtcaatcactcgtgccaagtttgaggaaatcaatatggactt |
34467091 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 360
Target Start/End: Original strand, 52549269 - 52549345
Alignment:
| Q |
284 |
ttttcttcatcaatcactcgtgccaaatttgaggaaattaatatagactttttcatcgagtgtatgaatattgttga |
360 |
Q |
| |
|
||||||||||| |||| | | ||||| ||||||||||| ||||| ||| |||| | ||||||||||| |||||||| |
|
|
| T |
52549269 |
ttttcttcatcgatcaatagggccaagtttgaggaaatgaatatggacctttttaaggagtgtatgaagattgttga |
52549345 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 69; Significance: 7e-31; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 68 - 360
Target Start/End: Complemental strand, 28220045 - 28219753
Alignment:
| Q |
68 |
gccaccgcaggtaacactcaccttgggggagaggacttcgataacagaatggtgaattattttgttgaggagttcaaaaagaagaataacgtggacatca |
167 |
Q |
| |
|
|||||||| || ||||||||||| |||||||||||||| |||| || |||||||| || || | |||||||| || |||||||| || |||||||| | |
|
|
| T |
28220045 |
gccaccgctggaaacactcacctcgggggagaggactttgatagtaggatggtgaactacttcgcagaggagtttaagaagaagaacaaggtggacatta |
28219946 |
T |
|
| Q |
168 |
gtgggaatccaaaatccttaaggaggttgagaactgcctgtgagagggcaaaaaggatactctctttttcttttgtcaccaccgttgaggtcgatgcttt |
267 |
Q |
| |
|
||| || ||| | ||||||||||||||||||| || || |||| |||||||||| ||| |||||| || ||||| ||||| ||||||| ||| |||| |
|
|
| T |
28219945 |
ctggaaactcaagagccttaaggaggttgagaacagcgtgcaagagagcaaaaaggacactatcttttgctgttgtcgccaccattgaggtagattcttt |
28219846 |
T |
|
| Q |
268 |
atttatgggaatcgacttttcttcatcaatcactcgtgccaaatttgaggaaattaatatagactttttcatcgagtgtatgaatattgttga |
360 |
Q |
| |
|
|||| || || || || | ||||||||| |||||||| || ||||||||||| ||||| || |||||| |||||| |||| | |||||| |
|
|
| T |
28219845 |
atttgaaggcattgatttcttttcatcaattactcgtgctaagtttgaggaaatcaatatggatcttttcaatgagtgtttgaaaactgttga |
28219753 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 57; Significance: 1e-23; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 80 - 360
Target Start/End: Complemental strand, 43744931 - 43744651
Alignment:
| Q |
80 |
aacactcaccttgggggagaggacttcgataacagaatggtgaattattttgttgaggagttcaaaaagaagaataacgtggacatcagtgggaatccaa |
179 |
Q |
| |
|
||||||||||| || |||||||| || ||||| || |||||||| || || | |||||||| || |||||||| || |||||||| | ||| || |||| |
|
|
| T |
43744931 |
aacactcacctcggaggagaggattttgataataggatggtgaactacttcgcagaggagtttaagaagaagaacaaggtggacattactggaaacccaa |
43744832 |
T |
|
| Q |
180 |
aatccttaaggaggttgagaactgcctgtgagagggcaaaaaggatactctctttttcttttgtcaccaccgttgaggtcgatgctttatttatgggaat |
279 |
Q |
| |
|
| | ||||||||||||||||| || || || || |||||||||| | | |||||| || |||||||||| ||||||| ||| |||||||| ||| || |
|
|
| T |
43744831 |
gagcattaaggaggttgagaacagcatgcgaaagagcaaaaaggacattatcttttgctgttgtcaccactattgaggtagattctttatttgagggcat |
43744732 |
T |
|
| Q |
280 |
cgacttttcttcatcaatcactcgtgccaaatttgaggaaattaatatagactttttcatcgagtgtatgaatattgttga |
360 |
Q |
| |
|
|| || | | || ||||||||||| | || ||||||||||| ||||| || | |||| ||||||| |||| |||||||| |
|
|
| T |
43744731 |
tgatttctttacaacaatcactcgtactaagtttgaggaaatcaatatggatctcttcaacgagtgtttgaaaattgttga |
43744651 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 224
Target Start/End: Complemental strand, 12528648 - 12528475
Alignment:
| Q |
51 |
atgtctttgaagtaaaagccaccgcaggtaacactcaccttgggggagaggacttcgataacagaatggtgaattattttgttgaggagttcaaaaagaa |
150 |
Q |
| |
|
||||||| ||||| || ||||| || || ||||||||||||| ||||||||||| ||||| ||||||||||| | ||||| | ||||| || | ||| |
|
|
| T |
12528648 |
atgtcttcgaagtcaaggccactgccggagacactcaccttggaggagaggactttgataatcgaatggtgaatcactttgtgaaagagtttaagaggaa |
12528549 |
T |
|
| Q |
151 |
gaataacgtggacatcagtgggaatccaaaatccttaaggaggttgagaactgcctgtgagagggcaaaaagga |
224 |
Q |
| |
|
||| || || ||||| | |||||| ||||| || ||||||| ||||||||| ||| |||| ||| ||||||| |
|
|
| T |
12528548 |
gaacaaagttgacattattgggaactcaaaagccctaaggagattgagaactaactgcgagaaggcgaaaagga |
12528475 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 47
Target Start/End: Complemental strand, 43745038 - 43744997
Alignment:
| Q |
6 |
tgggtggtggtacttttgatgtgtctatcctcacaattaagg |
47 |
Q |
| |
|
|||||||||| ||||||||||||||| |||| |||||||||| |
|
|
| T |
43745038 |
tgggtggtgggacttttgatgtgtctctccttacaattaagg |
43744997 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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