View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21097_high_88 (Length: 252)
Name: NF21097_high_88
Description: NF21097
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21097_high_88 |
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Alignment Details
Target: chr8 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 37604574 - 37604817
Alignment:
| Q |
1 |
cattttattcttttttagtttggtatgttttgttttcttctacgaaactataatgtgatgacaaataaacgatctatcattgtcatcctatcagcatctc |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37604574 |
cattttattcttttttagtttggtatgttttgttttcttctacgaaactataatgtgatgacaaataaacgatctatcattgtcatcctatcagcatctc |
37604673 |
T |
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| Q |
101 |
ggatggaagcactagtcgatacttgatagtgtactaggaatgatgctgatgcatgcaccatactacacggtcgtgaagttaccctttgaaattaaaatat |
200 |
Q |
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|||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37604674 |
ggatggaagcactagtcgatacttgatagtttaataggaatgatgctgatgcatgcaccatactacacggtcgtgaagttaccctttgaaattaaaatat |
37604773 |
T |
|
| Q |
201 |
taaaacctttctttataactaagactatgacaacctttcttctc |
244 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37604774 |
taaaacctttctttataactaagactatgacaacctttcttctc |
37604817 |
T |
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