View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21097_high_91 (Length: 249)
Name: NF21097_high_91
Description: NF21097
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21097_high_91 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 9 - 249
Target Start/End: Original strand, 42700928 - 42701168
Alignment:
| Q |
9 |
agcacagaagttcaagtatgtactatcaaccattgcagcaaatcgaagcctattgcttgccacaatatcgaaatctaaatcatcagctatacaacaatga |
108 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42700928 |
agcatagaagttcaagtatgtactatcaaccattgcagcaaatcgaagcctattgcttgccacaatatcgaaatctaaatcatcagctatacaacaatga |
42701027 |
T |
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| Q |
109 |
tggaggccaggcaactcaattctcggctccaacttcttctgacctttattactgcactttggagtcgtcctctgcaactggaagtttcgccgtttacaac |
208 |
Q |
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||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
42701028 |
tggaggccaagcaactcaattctcggctccaacttcttctgacctttattactgcactttggagtcgtcctctgcagctggaagtttcgccgtttacaac |
42701127 |
T |
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| Q |
209 |
tctccttcaactgttagtttctcacctaacgatagtccaat |
249 |
Q |
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||||||||||||||||||||||| ||||||||||||||||| |
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| T |
42701128 |
tctccttcaactgttagtttctcgcctaacgatagtccaat |
42701168 |
T |
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