View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21097_low_106 (Length: 238)

Name: NF21097_low_106
Description: NF21097
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21097_low_106
NF21097_low_106
[»] chr8 (36 HSPs)
chr8 (17-167)||(2823385-2823535)
chr8 (79-138)||(2786535-2786594)
chr8 (184-234)||(1775594-1775644)
chr8 (184-234)||(9483598-9483648)
chr8 (184-238)||(32069202-32069256)
chr8 (184-238)||(34103182-34103236)
chr8 (185-238)||(23161280-23161333)
chr8 (184-238)||(8258282-8258336)
chr8 (187-237)||(23053813-23053863)
chr8 (184-238)||(26042901-26042955)
chr8 (184-238)||(29125670-29125724)
chr8 (184-234)||(30577817-30577867)
chr8 (184-238)||(30633025-30633079)
chr8 (184-238)||(32512215-32512269)
chr8 (184-238)||(35550552-35550606)
chr8 (184-238)||(36901269-36901323)
chr8 (184-237)||(2823562-2823615)
chr8 (185-233)||(25280945-25280994)
chr8 (184-234)||(1281844-1281894)
chr8 (184-234)||(1782951-1783001)
chr8 (187-229)||(1783181-1783223)
chr8 (187-229)||(3154069-3154111)
chr8 (184-234)||(3154268-3154318)
chr8 (184-234)||(4018734-4018784)
chr8 (184-234)||(14819256-14819306)
chr8 (187-229)||(21442321-21442363)
chr8 (184-234)||(29377842-29377892)
chr8 (184-234)||(30207353-30207403)
chr8 (184-234)||(39934361-39934411)
chr8 (184-234)||(42556370-42556420)
chr8 (184-237)||(13468261-13468314)
chr8 (184-229)||(21442077-21442122)
chr8 (185-238)||(26630204-26630257)
chr8 (186-234)||(19971629-19971677)
chr8 (198-238)||(25123560-25123600)
chr8 (186-238)||(42556844-42556896)
[»] chr4 (44 HSPs)
chr4 (185-238)||(6946609-6946662)
chr4 (184-238)||(4490628-4490682)
chr4 (184-238)||(26958519-26958573)
chr4 (184-238)||(49426143-49426197)
chr4 (184-237)||(6137694-6137747)
chr4 (184-237)||(33811008-33811061)
chr4 (185-238)||(38425846-38425899)
chr4 (184-236)||(46106637-46106689)
chr4 (187-229)||(7630040-7630082)
chr4 (187-229)||(10981494-10981536)
chr4 (184-234)||(13621317-13621367)
chr4 (184-238)||(14862936-14862990)
chr4 (184-238)||(23384096-23384150)
chr4 (184-238)||(26335704-26335758)
chr4 (184-234)||(30258075-30258125)
chr4 (184-234)||(34682996-34683046)
chr4 (184-234)||(41172629-41172679)
chr4 (184-234)||(42807859-42807909)
chr4 (184-238)||(45875723-45875776)
chr4 (184-238)||(49605982-49606036)
chr4 (184-238)||(54742411-54742465)
chr4 (185-238)||(142598-142651)
chr4 (185-234)||(5046590-5046639)
chr4 (185-234)||(12584235-12584284)
chr4 (185-238)||(13211671-13211724)
chr4 (185-234)||(47382371-47382420)
chr4 (184-229)||(48560222-48560267)
chr4 (186-238)||(52306733-52306785)
chr4 (187-234)||(21519951-21519998)
chr4 (184-234)||(578705-578755)
chr4 (188-238)||(4505586-4505636)
chr4 (184-234)||(5157217-5157267)
chr4 (187-229)||(6213966-6214008)
chr4 (184-234)||(7630277-7630327)
chr4 (184-234)||(9744330-9744380)
chr4 (187-229)||(14203063-14203105)
chr4 (187-229)||(17180933-17180975)
chr4 (184-229)||(14202818-14202863)
chr4 (184-229)||(18470237-18470282)
chr4 (185-234)||(32012834-32012883)
chr4 (184-229)||(41172390-41172435)
chr4 (185-234)||(50182392-50182441)
chr4 (186-234)||(17745365-17745413)
chr4 (186-238)||(29101950-29102002)
[»] chr7 (34 HSPs)
chr7 (184-238)||(938857-938911)
chr7 (184-234)||(26380022-26380072)
chr7 (184-238)||(27168433-27168487)
chr7 (185-238)||(6559320-6559373)
chr7 (185-238)||(25818447-25818500)
chr7 (186-238)||(19069360-19069412)
chr7 (185-229)||(34986488-34986532)
chr7 (184-234)||(8047920-8047970)
chr7 (184-234)||(12080899-12080949)
chr7 (184-234)||(22479406-22479456)
chr7 (184-234)||(24720461-24720511)
chr7 (184-234)||(37138882-37138932)
chr7 (184-234)||(38368040-38368090)
chr7 (185-234)||(11327797-11327846)
chr7 (184-229)||(48454736-48454781)
chr7 (186-238)||(2509500-2509552)
chr7 (184-238)||(18352496-18352548)
chr7 (187-234)||(34986726-34986773)
chr7 (184-238)||(454066-454120)
chr7 (187-229)||(4655009-4655051)
chr7 (184-234)||(4655250-4655300)
chr7 (184-238)||(11766085-11766138)
chr7 (184-234)||(15230265-15230314)
chr7 (187-229)||(18199532-18199574)
chr7 (184-234)||(18199773-18199823)
chr7 (187-229)||(27811906-27811948)
chr7 (184-234)||(27812142-27812192)
chr7 (184-234)||(28605641-28605691)
chr7 (184-234)||(32577770-32577820)
chr7 (184-238)||(41037320-41037374)
chr7 (187-229)||(45225224-45225266)
chr7 (184-234)||(45225594-45225644)
chr7 (184-229)||(7437744-7437789)
chr7 (184-229)||(20517126-20517171)
[»] chr6 (21 HSPs)
chr6 (184-238)||(4838233-4838287)
chr6 (184-238)||(33730479-33730533)
chr6 (185-238)||(18154503-18154556)
chr6 (191-234)||(1369855-1369898)
chr6 (187-229)||(1370092-1370134)
chr6 (184-234)||(15881875-15881925)
chr6 (187-233)||(15882075-15882121)
chr6 (187-233)||(29646178-29646224)
chr6 (185-234)||(16599019-16599068)
chr6 (184-229)||(31133070-31133115)
chr6 (187-234)||(20755358-20755405)
chr6 (184-234)||(11100329-11100379)
chr6 (184-238)||(18102646-18102700)
chr6 (187-229)||(20755549-20755591)
chr6 (184-234)||(29646414-29646464)
chr6 (185-234)||(9955745-9955794)
chr6 (185-238)||(11010097-11010150)
chr6 (185-234)||(15962687-15962736)
chr6 (187-236)||(30525537-30525586)
chr6 (186-234)||(8172074-8172122)
chr6 (186-238)||(32194175-32194227)
[»] chr5 (31 HSPs)
chr5 (184-234)||(26906082-26906132)
chr5 (184-238)||(28747708-28747762)
chr5 (184-234)||(33026416-33026466)
chr5 (185-238)||(6436370-6436423)
chr5 (187-238)||(4737881-4737932)
chr5 (184-238)||(3038833-3038887)
chr5 (184-234)||(4736979-4737029)
chr5 (184-238)||(14369713-14369767)
chr5 (184-238)||(17421640-17421694)
chr5 (188-238)||(31240426-31240476)
chr5 (184-238)||(37468491-37468545)
chr5 (184-238)||(40234256-40234310)
chr5 (185-238)||(13711215-13711268)
chr5 (184-236)||(7014688-7014740)
chr5 (187-238)||(12910204-12910255)
chr5 (184-234)||(857855-857905)
chr5 (184-234)||(1921648-1921698)
chr5 (184-234)||(2528713-2528763)
chr5 (185-235)||(6261176-6261226)
chr5 (184-238)||(17233094-17233148)
chr5 (187-233)||(22213166-22213212)
chr5 (184-234)||(25912228-25912278)
chr5 (187-229)||(29302298-29302340)
chr5 (187-229)||(30486061-30486103)
chr5 (187-229)||(33833247-33833289)
chr5 (184-234)||(37249490-37249540)
chr5 (184-234)||(37282367-37282417)
chr5 (187-229)||(39999188-39999230)
chr5 (185-238)||(8410800-8410853)
chr5 (185-238)||(31752393-31752446)
chr5 (186-234)||(15809159-15809207)
[»] chr3 (41 HSPs)
chr3 (184-238)||(3800147-3800201)
chr3 (184-234)||(30347724-30347774)
chr3 (184-237)||(27359948-27360001)
chr3 (185-238)||(53581511-53581564)
chr3 (185-232)||(45059483-45059530)
chr3 (184-238)||(1376185-1376239)
chr3 (184-238)||(36823906-36823960)
chr3 (185-234)||(6748601-6748650)
chr3 (185-238)||(17604884-17604937)
chr3 (184-229)||(45293152-45293197)
chr3 (186-234)||(994674-994722)
chr3 (186-234)||(7848721-7848769)
chr3 (184-236)||(13349086-13349138)
chr3 (186-234)||(48649488-48649536)
chr3 (186-238)||(48765400-48765452)
chr3 (187-238)||(31039744-31039795)
chr3 (187-229)||(4043586-4043628)
chr3 (187-229)||(6109359-6109401)
chr3 (184-234)||(6114976-6115026)
chr3 (184-234)||(7521553-7521603)
chr3 (187-229)||(8815290-8815332)
chr3 (184-234)||(8815525-8815575)
chr3 (184-234)||(17065920-17065970)
chr3 (184-234)||(17226152-17226202)
chr3 (187-229)||(21408677-21408719)
chr3 (187-229)||(21727603-21727645)
chr3 (184-234)||(21727840-21727890)
chr3 (184-234)||(26152460-26152510)
chr3 (187-229)||(26158427-26158469)
chr3 (184-234)||(27728388-27728438)
chr3 (187-229)||(47461652-47461694)
chr3 (184-234)||(47461889-47461939)
chr3 (184-229)||(3544243-3544288)
chr3 (185-234)||(6109115-6109164)
chr3 (185-234)||(12896832-12896881)
chr3 (185-238)||(22894936-22894989)
chr3 (184-229)||(26152147-26152192)
chr3 (185-238)||(33838001-33838054)
chr3 (185-234)||(51952397-51952445)
chr3 (186-234)||(4043830-4043878)
chr3 (186-234)||(12127507-12127555)
[»] chr2 (27 HSPs)
chr2 (185-238)||(33740133-33740186)
chr2 (187-238)||(41927558-41927609)
chr2 (184-238)||(1750150-1750204)
chr2 (184-238)||(16513035-16513089)
chr2 (184-234)||(23175352-23175402)
chr2 (184-234)||(23586609-23586659)
chr2 (184-238)||(34082746-34082800)
chr2 (184-234)||(39906229-39906279)
chr2 (185-234)||(18370415-18370464)
chr2 (185-234)||(30406422-30406471)
chr2 (187-234)||(19630715-19630762)
chr2 (187-234)||(19827616-19827663)
chr2 (187-234)||(39904851-39904898)
chr2 (184-234)||(7681965-7682015)
chr2 (188-238)||(8386879-8386929)
chr2 (184-234)||(9689335-9689385)
chr2 (187-233)||(9690358-9690404)
chr2 (187-233)||(22711233-22711279)
chr2 (184-238)||(37169735-37169789)
chr2 (187-229)||(39906474-39906516)
chr2 (184-238)||(42850195-42850249)
chr2 (184-234)||(44257656-44257706)
chr2 (187-229)||(44542809-44542851)
chr2 (184-234)||(44543045-44543095)
chr2 (184-229)||(41527820-41527865)
chr2 (185-229)||(3769412-3769456)
chr2 (186-238)||(27337049-27337101)
[»] chr1 (26 HSPs)
chr1 (185-238)||(463493-463546)
chr1 (187-238)||(32994351-32994402)
chr1 (184-238)||(8642957-8643011)
chr1 (187-233)||(10764560-10764606)
chr1 (184-238)||(13157740-13157794)
chr1 (184-234)||(13385923-13385973)
chr1 (187-233)||(13943449-13943495)
chr1 (184-238)||(16005525-16005579)
chr1 (184-238)||(24770810-24770864)
chr1 (184-234)||(27389678-27389728)
chr1 (184-238)||(34515311-34515365)
chr1 (184-234)||(36817596-36817646)
chr1 (184-237)||(50559431-50559484)
chr1 (187-229)||(14494560-14494602)
chr1 (184-234)||(20411143-20411193)
chr1 (187-229)||(20411388-20411430)
chr1 (184-234)||(27255598-27255648)
chr1 (184-234)||(32374489-32374539)
chr1 (187-229)||(36817841-36817883)
chr1 (184-234)||(39424216-39424265)
chr1 (184-238)||(41146211-41146265)
chr1 (187-229)||(43236353-43236395)
chr1 (184-238)||(45818743-45818797)
chr1 (184-234)||(47131103-47131153)
chr1 (185-234)||(2965372-2965421)
chr1 (185-238)||(32155945-32155998)
[»] scaffold0002 (2 HSPs)
scaffold0002 (184-227)||(452316-452359)
scaffold0002 (187-229)||(452559-452601)
[»] scaffold1259 (1 HSPs)
scaffold1259 (184-226)||(1-43)
[»] scaffold0778 (1 HSPs)
scaffold0778 (184-234)||(6220-6270)
[»] scaffold0325 (1 HSPs)
scaffold0325 (188-238)||(6504-6554)
[»] scaffold0217 (1 HSPs)
scaffold0217 (184-234)||(20805-20855)
[»] scaffold0074 (1 HSPs)
scaffold0074 (184-234)||(26000-26050)
[»] scaffold0069 (1 HSPs)
scaffold0069 (184-234)||(14929-14979)
[»] scaffold0068 (2 HSPs)
scaffold0068 (187-229)||(57857-57899)
scaffold0068 (184-234)||(58094-58144)


Alignment Details
Target: chr8 (Bit Score: 135; Significance: 2e-70; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 17 - 167
Target Start/End: Original strand, 2823385 - 2823535
Alignment:
Q  17 atagctgagttttgtcgatactcaaaataatactcgtgtgtcatccgaacgtgcaagtagcaatgcaaacgaatcatgctcccgtatataccaaaagtga 116  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2823385 atagctgagttttgtcaatactcaaaataatactcgtgtgacatcctaacgtgcaagtagcaatgcaaacgaatcatgctcccgtatataccaaaagtga 2823484  T
Q  117 aagtttccatcatttcattatgatagtaatgactatttgcaattattgtga 167  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  2823485 aagtttccatcatttcattatgatagtaatgactatttgtaattattgtga 2823535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 79 - 138
Target Start/End: Complemental strand, 2786594 - 2786535
Alignment:
Q  79 atgcaaacgaatcatgctcccgtatataccaaaagtgaaagtttccatcatttcattatg 138  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||||| |||||    
T  2786594 atgcaaacgaatcatgctcccgtagataccaaacgtgaaagtttccatcatttcgttatg 2786535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 184 - 234
Target Start/End: Complemental strand, 1775644 - 1775594
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    |||||||||||||||||||||| |||||| ||||| |||||||||||||||    
T  1775644 ggatttgctagaacacacccactagtttttatgtgggagtgttttaacaag 1775594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 184 - 234
Target Start/End: Original strand, 9483598 - 9483648
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    |||||||||||||||||||||| |||||| ||||| |||||||||||||||    
T  9483598 ggatttgctagaacacacccactagtttttatgtgggagtgttttaacaag 9483648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 184 - 238
Target Start/End: Complemental strand, 32069256 - 32069202
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    |||||||||||| ||||||||| |||||||||||| |||||||||| ||||||||    
T  32069256 ggatttgctagaccacacccactagttttcatgtgtgagtgttttagcaagctac 32069202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 184 - 238
Target Start/End: Complemental strand, 34103236 - 34103182
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    |||||||||||||||||||||| |||||||||||| || ||||||| ||||||||    
T  34103236 ggatttgctagaacacacccactagttttcatgtgggattgttttagcaagctac 34103182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 238
Target Start/End: Original strand, 23161280 - 23161333
Alignment:
Q  185 gatttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    |||||||||||||| |||||| |||||||||||| |||||||||| ||||||||    
T  23161280 gatttgctagaacatacccactagttttcatgtgggagtgttttagcaagctac 23161333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 8258282 - 8258336
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    |||||||||| ||||||||||| |||||| ||||| |||||||||| ||||||||    
T  8258282 ggatttgctataacacacccactagtttttatgtgggagtgttttagcaagctac 8258336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 187 - 237
Target Start/End: Original strand, 23053813 - 23053863
Alignment:
Q  187 tttgctagaacacacccacaagttttcatgtgagagtgttttaacaagcta 237  Q
    ||||||||||||||||||| |||||| ||||| |||||||||| |||||||    
T  23053813 tttgctagaacacacccactagtttttatgtgggagtgttttagcaagcta 23053863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 26042901 - 26042955
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    |||||||||||||||||||||| | |||| ||||| |||||||||| ||||||||    
T  26042901 ggatttgctagaacacacccactaatttttatgtgggagtgttttagcaagctac 26042955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 29125670 - 29125724
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    |||||||||||||||||||||| | |||| ||||| |||||||||| ||||||||    
T  29125670 ggatttgctagaacacacccactaatttttatgtgggagtgttttagcaagctac 29125724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 184 - 234
Target Start/End: Original strand, 30577817 - 30577867
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    |||||||||||||||||||||  |||||| |||||||||||||||| ||||    
T  30577817 ggatttgctagaacacacccattagtttttatgtgagagtgttttagcaag 30577867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 30633025 - 30633079
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    |||||||||||||||||||||  |||||| ||||||||||||||||  |||||||    
T  30633025 ggatttgctagaacacacccattagtttttatgtgagagtgttttagtaagctac 30633079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 184 - 238
Target Start/End: Complemental strand, 32512269 - 32512215
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    ||||||| ||||||||| |||| |||||| |||||||||||||||| ||||||||    
T  32512269 ggatttgttagaacacatccactagtttttatgtgagagtgttttagcaagctac 32512215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 35550552 - 35550606
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    ||||||||||||||||| |||| |||||| ||||| |||||||||| ||||||||    
T  35550552 ggatttgctagaacacatccactagtttttatgtgggagtgttttagcaagctac 35550606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 184 - 238
Target Start/End: Complemental strand, 36901323 - 36901269
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    |||||||||| ||||||||||| |||||| ||||| |||||||||| ||||||||    
T  36901323 ggatttgctaaaacacacccactagtttttatgtgggagtgttttagcaagctac 36901269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 184 - 237
Target Start/End: Original strand, 2823562 - 2823615
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaagcta 237  Q
    |||||||||||||||||||||| |||||| |||||  ||||||||| |||||||    
T  2823562 ggatttgctagaacacacccactagtttttatgtggaagtgttttagcaagcta 2823615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 185 - 233
Target Start/End: Original strand, 25280945 - 25280994
Alignment:
Q  185 gatttgctagaa-cacacccacaagttttcatgtgagagtgttttaacaa 233  Q
    |||||||||||| ||||||||| |||||| ||||||||||||||||||||    
T  25280945 gatttgctagaaacacacccactagtttttatgtgagagtgttttaacaa 25280994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 234
Target Start/End: Original strand, 1281844 - 1281894
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    |||||||||||||||||||||| | |||| ||||| |||||||||| ||||    
T  1281844 ggatttgctagaacacacccactaatttttatgtgggagtgttttagcaag 1281894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 234
Target Start/End: Original strand, 1782951 - 1783001
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    |||||||||| ||||||||||| |||||| ||||| |||||||||| ||||    
T  1782951 ggatttgctataacacacccactagtttttatgtgggagtgttttagcaag 1783001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 229
Target Start/End: Complemental strand, 1783223 - 1783181
Alignment:
Q  187 tttgctagaacacacccacaagttttcatgtgagagtgtttta 229  Q
    ||||||||||||||||||| |||||| ||||| ||||||||||    
T  1783223 tttgctagaacacacccactagtttttatgtgggagtgtttta 1783181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 229
Target Start/End: Original strand, 3154069 - 3154111
Alignment:
Q  187 tttgctagaacacacccacaagttttcatgtgagagtgtttta 229  Q
    ||||||||||||||||||| |||||| ||||| ||||||||||    
T  3154069 tttgctagaacacacccactagtttttatgtgggagtgtttta 3154111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 234
Target Start/End: Complemental strand, 3154318 - 3154268
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    |||||||||||||||||||||| | |||| ||||| |||||||||| ||||    
T  3154318 ggatttgctagaacacacccactaatttttatgtgggagtgttttagcaag 3154268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 234
Target Start/End: Complemental strand, 4018784 - 4018734
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    ||||||| |||||||||||||| |||||| ||||| |||||||||| ||||    
T  4018784 ggatttgttagaacacacccactagtttttatgtgggagtgttttagcaag 4018734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 234
Target Start/End: Original strand, 14819256 - 14819306
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    |||||||||||||||||||||| | |||| ||||| |||||||||| ||||    
T  14819256 ggatttgctagaacacacccactaatttttatgtgggagtgttttagcaag 14819306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 229
Target Start/End: Complemental strand, 21442363 - 21442321
Alignment:
Q  187 tttgctagaacacacccacaagttttcatgtgagagtgtttta 229  Q
    ||||||||||||||||||| |||||| ||||| ||||||||||    
T  21442363 tttgctagaacacacccactagtttttatgtgggagtgtttta 21442321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 234
Target Start/End: Original strand, 29377842 - 29377892
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    |||||||||||||||||||| | |||||| ||||| |||||||||| ||||    
T  29377842 ggatttgctagaacacaccccctagtttttatgtgggagtgttttagcaag 29377892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 234
Target Start/End: Complemental strand, 30207403 - 30207353
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    ||||||||||||||||| |||| |||||| ||||| |||||||||| ||||    
T  30207403 ggatttgctagaacacatccactagtttttatgtgggagtgttttagcaag 30207353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 234
Target Start/End: Original strand, 39934361 - 39934411
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    |||||||||||||||||||||| |||||| || || |||||||||| ||||    
T  39934361 ggatttgctagaacacacccactagtttttatttgggagtgttttatcaag 39934411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 234
Target Start/End: Original strand, 42556370 - 42556420
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    |||||||||||||||||||| | |||||| | ||| |||||||||||||||    
T  42556370 ggatttgctagaacacacccgctagtttttacgtgggagtgttttaacaag 42556420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 237
Target Start/End: Original strand, 13468261 - 13468314
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaagcta 237  Q
    ||||||| |||||||||||||| |||||| ||||| |||| ||||| |||||||    
T  13468261 ggatttgttagaacacacccactagtttttatgtgggagtattttagcaagcta 13468314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 229
Target Start/End: Original strand, 21442077 - 21442122
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgtttta 229  Q
    |||||||||||||||||||||| | |||| ||||| ||||||||||    
T  21442077 ggatttgctagaacacacccactaatttttatgtgggagtgtttta 21442122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 185 - 238
Target Start/End: Complemental strand, 26630257 - 26630204
Alignment:
Q  185 gatttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    ||||| ||||||||||||||| |||||| ||||| |||||||| | ||||||||    
T  26630257 gatttactagaacacacccactagtttttatgtgggagtgtttgagcaagctac 26630204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 234
Target Start/End: Complemental strand, 19971677 - 19971629
Alignment:
Q  186 atttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    |||||||||||||||||||| |||||| ||||  |||||||||| ||||    
T  19971677 atttgctagaacacacccactagtttttatgttggagtgttttagcaag 19971629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 238
Target Start/End: Complemental strand, 25123600 - 25123560
Alignment:
Q  198 acacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    |||||||| |||||| |||||||||||||||| ||||||||    
T  25123600 acacccactagtttttatgtgagagtgttttagcaagctac 25123560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 238
Target Start/End: Complemental strand, 42556896 - 42556844
Alignment:
Q  186 atttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    |||||||| |||||| |||| |||||| |||| ||||||||||| ||||||||    
T  42556896 atttgctataacacatccactagtttttatgtaagagtgttttagcaagctac 42556844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 185 - 238
Target Start/End: Original strand, 6946609 - 6946662
Alignment:
Q  185 gatttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    ||||||||||||||||||||| |||||| |||||||||||||||| ||||||||    
T  6946609 gatttgctagaacacacccactagtttttatgtgagagtgttttagcaagctac 6946662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 4490628 - 4490682
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    |||||||||||||||||||||| | |||| ||||| |||||||||||||||||||    
T  4490628 ggatttgctagaacacacccactaatttttatgtgggagtgttttaacaagctac 4490682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 26958519 - 26958573
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    |||||||||||||||||||||| |||||| ||||| |||||||||| ||||||||    
T  26958519 ggatttgctagaacacacccactagtttttatgtgggagtgttttagcaagctac 26958573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 184 - 238
Target Start/End: Complemental strand, 49426197 - 49426143
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    |||||||||||||||||||||| |||||| |||||||||||||||| ||| ||||    
T  49426197 ggatttgctagaacacacccactagtttttatgtgagagtgttttagcaacctac 49426143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 184 - 237
Target Start/End: Complemental strand, 6137747 - 6137694
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaagcta 237  Q
    |||||||||||||||||||||| |||||| ||||| |||||||||| |||||||    
T  6137747 ggatttgctagaacacacccactagtttttatgtgggagtgttttagcaagcta 6137694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 184 - 237
Target Start/End: Original strand, 33811008 - 33811061
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaagcta 237  Q
    ||||||||||||||||| |||| |||||| ||||| ||||||||||||||||||    
T  33811008 ggatttgctagaacacatccactagtttttatgtgggagtgttttaacaagcta 33811061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 238
Target Start/End: Complemental strand, 38425899 - 38425846
Alignment:
Q  185 gatttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    ||||||||||||||||||||| |||||| ||||| |||||||||| ||||||||    
T  38425899 gatttgctagaacacacccacgagtttttatgtgggagtgttttagcaagctac 38425846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 46106637 - 46106689
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaagct 236  Q
    |||||||||||||||||||||| |||||| ||||| |||||||||| ||||||    
T  46106637 ggatttgctagaacacacccactagtttttatgtgggagtgttttagcaagct 46106689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 187 - 229
Target Start/End: Original strand, 7630040 - 7630082
Alignment:
Q  187 tttgctagaacacacccacaagttttcatgtgagagtgtttta 229  Q
    ||||||||||||||||||| |||||| ||||||||||||||||    
T  7630040 tttgctagaacacacccactagtttttatgtgagagtgtttta 7630082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 187 - 229
Target Start/End: Complemental strand, 10981536 - 10981494
Alignment:
Q  187 tttgctagaacacacccacaagttttcatgtgagagtgtttta 229  Q
    ||||||||||||||||||| |||||| ||||||||||||||||    
T  10981536 tttgctagaacacacccactagtttttatgtgagagtgtttta 10981494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 184 - 234
Target Start/End: Complemental strand, 13621367 - 13621317
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    |||||||||||||||||||||| |||||| ||||| |||||||||| ||||    
T  13621367 ggatttgctagaacacacccactagtttttatgtgggagtgttttagcaag 13621317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 14862936 - 14862990
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    ||||||| |||||||||||||| |||||| ||||| |||||||||| ||||||||    
T  14862936 ggatttgttagaacacacccactagtttttatgtgggagtgttttagcaagctac 14862990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 184 - 238
Target Start/End: Complemental strand, 23384150 - 23384096
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    ||||||||||||||| |||||| |||||| ||||| |||||||||| ||||||||    
T  23384150 ggatttgctagaacatacccaccagtttttatgtgggagtgttttagcaagctac 23384096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 26335704 - 26335758
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    ||||||||||||||||||| || |||||| ||||| |||||||||| ||||||||    
T  26335704 ggatttgctagaacacaccaactagtttttatgtgggagtgttttagcaagctac 26335758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 184 - 234
Target Start/End: Original strand, 30258075 - 30258125
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    |||||||||||||||||||||| |||||| ||||| |||||||||| ||||    
T  30258075 ggatttgctagaacacacccactagtttttatgtgggagtgttttagcaag 30258125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 184 - 234
Target Start/End: Original strand, 34682996 - 34683046
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    |||||||||||||||||||||| |||||| ||||| |||||||||| ||||    
T  34682996 ggatttgctagaacacacccactagtttttatgtgggagtgttttagcaag 34683046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 184 - 234
Target Start/End: Complemental strand, 41172679 - 41172629
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    |||||||||||||||||||||| |||||| ||||| |||||||||| ||||    
T  41172679 ggatttgctagaacacacccactagtttttatgtgggagtgttttagcaag 41172629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 184 - 234
Target Start/End: Original strand, 42807859 - 42807909
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    |||||||||||||||||||||| |||||| ||||| |||||||||| ||||    
T  42807859 ggatttgctagaacacacccactagtttttatgtgggagtgttttagcaag 42807909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 45875723 - 45875776
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    ||||||||||||||||||||| | ||||| ||||| |||||||||||||||||||    
T  45875723 ggatttgctagaacacacccata-gtttttatgtgggagtgttttaacaagctac 45875776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 49605982 - 49606036
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    ||||||||||||||| |||||| |||||| | ||| |||||||||||||||||||    
T  49605982 ggatttgctagaacatacccactagtttttaggtgggagtgttttaacaagctac 49606036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 54742411 - 54742465
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    |||||||||||||||||||||| |||||| ||||| || ||||||| ||||||||    
T  54742411 ggatttgctagaacacacccactagtttttatgtgggaatgttttagcaagctac 54742465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 185 - 238
Target Start/End: Original strand, 142598 - 142651
Alignment:
Q  185 gatttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    ||||||||||||||||||||| |||||| ||||  |||||||||| ||||||||    
T  142598 gatttgctagaacacacccactagtttttatgttggagtgttttagcaagctac 142651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 5046590 - 5046639
Alignment:
Q  185 gatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    ||||||||||||||||||||| |||||| ||||| |||||||||| ||||    
T  5046590 gatttgctagaacacacccactagtttttatgtgggagtgttttagcaag 5046639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 12584235 - 12584284
Alignment:
Q  185 gatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    ||||||||||||||||||||| |||||| | ||| |||||||||||||||    
T  12584235 gatttgctagaacacacccactagtttttacgtgggagtgttttaacaag 12584284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 185 - 238
Target Start/End: Complemental strand, 13211724 - 13211671
Alignment:
Q  185 gatttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    ||||||||||||||||| ||| |||||| ||||| |||||||||| ||||||||    
T  13211724 gatttgctagaacacactcactagttttgatgtgggagtgttttagcaagctac 13211671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 47382420 - 47382371
Alignment:
Q  185 gatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    ||||||||||||||||||||| |||||| ||||| |||||||||| ||||    
T  47382420 gatttgctagaacacacccactagtttttatgtgggagtgttttagcaag 47382371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 184 - 229
Target Start/End: Complemental strand, 48560267 - 48560222
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgtttta 229  Q
    |||||||||||||||||||||| |||||| ||||| ||||||||||    
T  48560267 ggatttgctagaacacacccactagtttttatgtgggagtgtttta 48560222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 238
Target Start/End: Original strand, 52306733 - 52306785
Alignment:
Q  186 atttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    |||||||||||||||||||| |||||| ||| |||||||||||| ||| ||||    
T  52306733 atttgctagaacacacccactagtttttatgggagagtgttttagcaacctac 52306785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 187 - 234
Target Start/End: Complemental strand, 21519998 - 21519951
Alignment:
Q  187 tttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    ||||||||||||||||||| |||||| ||||| |||||||||| ||||    
T  21519998 tttgctagaacacacccactagtttttatgtgggagtgttttagcaag 21519951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 234
Target Start/End: Original strand, 578705 - 578755
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    |||||||||||||||||||||| | |||| ||||| |||||||||| ||||    
T  578705 ggatttgctagaacacacccactaatttttatgtgggagtgttttagcaag 578755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 238
Target Start/End: Complemental strand, 4505636 - 4505586
Alignment:
Q  188 ttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    |||||| ||||||||||| |||||| ||||| |||||||||| ||||||||    
T  4505636 ttgctaaaacacacccactagtttttatgtgggagtgttttagcaagctac 4505586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 234
Target Start/End: Complemental strand, 5157267 - 5157217
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    ||||||||||||||||| |||| |||||| ||||| |||||||||| ||||    
T  5157267 ggatttgctagaacacatccactagtttttatgtgggagtgttttagcaag 5157217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 229
Target Start/End: Original strand, 6213966 - 6214008
Alignment:
Q  187 tttgctagaacacacccacaagttttcatgtgagagtgtttta 229  Q
    |||||||||||||| |||| |||||| ||||||||||||||||    
T  6213966 tttgctagaacacatccactagtttttatgtgagagtgtttta 6214008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 234
Target Start/End: Complemental strand, 7630327 - 7630277
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    |||||||||||||||||||||  |||||| ||||| |||||||||| ||||    
T  7630327 ggatttgctagaacacacccattagtttttatgtgggagtgttttagcaag 7630277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 234
Target Start/End: Complemental strand, 9744380 - 9744330
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    ||||||||||||||||| |||| |||||| |||||||||| ||||| ||||    
T  9744380 ggatttgctagaacacatccactagtttttatgtgagagtattttagcaag 9744330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 229
Target Start/End: Complemental strand, 14203105 - 14203063
Alignment:
Q  187 tttgctagaacacacccacaagttttcatgtgagagtgtttta 229  Q
    ||||||||||||||||||| |||||| ||||| ||||||||||    
T  14203105 tttgctagaacacacccactagtttttatgtgggagtgtttta 14203063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 229
Target Start/End: Original strand, 17180933 - 17180975
Alignment:
Q  187 tttgctagaacacacccacaagttttcatgtgagagtgtttta 229  Q
    ||||||||||||||||||| |||||| ||||| ||||||||||    
T  17180933 tttgctagaacacacccactagtttttatgtgggagtgtttta 17180975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 229
Target Start/End: Original strand, 14202818 - 14202863
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgtttta 229  Q
    |||||||||||||||||||||| | |||| ||||| ||||||||||    
T  14202818 ggatttgctagaacacacccactaatttttatgtgggagtgtttta 14202863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 229
Target Start/End: Original strand, 18470237 - 18470282
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgtttta 229  Q
    ||||||| |||||||||||||| |||||| ||||| ||||||||||    
T  18470237 ggatttgttagaacacacccactagtttttatgtgggagtgtttta 18470282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 32012883 - 32012834
Alignment:
Q  185 gatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    ||||||||||||||||||||| | |||| ||||| |||||||||| ||||    
T  32012883 gatttgctagaacacacccactaatttttatgtgggagtgttttagcaag 32012834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 229
Target Start/End: Original strand, 41172390 - 41172435
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgtttta 229  Q
    |||||||||||||||||||||| |||||| ||||| ||||| ||||    
T  41172390 ggatttgctagaacacacccactagtttttatgtgggagtgcttta 41172435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 50182441 - 50182392
Alignment:
Q  185 gatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    |||||| |||||||||||||| |||||| ||||| |||||||||| ||||    
T  50182441 gatttgttagaacacacccactagtttttatgtgggagtgttttagcaag 50182392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 234
Target Start/End: Complemental strand, 17745413 - 17745365
Alignment:
Q  186 atttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    |||||||||||||||| ||| |||||| ||||| |||||||||| ||||    
T  17745413 atttgctagaacacactcactagtttttatgtgggagtgttttagcaag 17745365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 238
Target Start/End: Original strand, 29101950 - 29102002
Alignment:
Q  186 atttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    |||||||||||||||||||| |||||| ||||  ||||||||||  |||||||    
T  29101950 atttgctagaacacacccactagtttttatgtaggagtgttttagtaagctac 29102002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 938857 - 938911
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    |||||||||||||||||||||| |||||| ||||| |||||||||| ||||||||    
T  938857 ggatttgctagaacacacccactagtttttatgtgggagtgttttagcaagctac 938911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 184 - 234
Target Start/End: Original strand, 26380022 - 26380072
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    |||||||||||||||||||||| |||||| ||||| |||||||||||||||    
T  26380022 ggatttgctagaacacacccactagtttttatgtgggagtgttttaacaag 26380072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 184 - 238
Target Start/End: Complemental strand, 27168487 - 27168433
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    |||||||||||||||||||||| |||||| ||||| |||||||||| ||||||||    
T  27168487 ggatttgctagaacacacccactagtttttatgtgtgagtgttttagcaagctac 27168433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 238
Target Start/End: Original strand, 6559320 - 6559373
Alignment:
Q  185 gatttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    ||||||||||||||||||||| |||||| ||||| |||||||||| ||||||||    
T  6559320 gatttgctagaacacacccactagttttgatgtgggagtgttttagcaagctac 6559373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 238
Target Start/End: Original strand, 25818447 - 25818500
Alignment:
Q  185 gatttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    ||||||||||||||||||||| |||||| ||||| |||||||||| ||||||||    
T  25818447 gatttgctagaacacacccactagtttttatgtgggagtgttttagcaagctac 25818500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 186 - 238
Target Start/End: Original strand, 19069360 - 19069412
Alignment:
Q  186 atttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    |||||||||||||||||||| |||||| |||| ||||||||||| ||||||||    
T  19069360 atttgctagaacacacccactagtttttatgtaagagtgttttagcaagctac 19069412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 185 - 229
Target Start/End: Original strand, 34986488 - 34986532
Alignment:
Q  185 gatttgctagaacacacccacaagttttcatgtgagagtgtttta 229  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||    
T  34986488 gatttgctagaacacacccactagtttttatgtgagagtgtttta 34986532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 184 - 234
Target Start/End: Original strand, 8047920 - 8047970
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    |||||||||||||||||||||| |||||| ||||| |||||||||| ||||    
T  8047920 ggatttgctagaacacacccactagtttttatgtgggagtgttttagcaag 8047970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 184 - 234
Target Start/End: Complemental strand, 12080949 - 12080899
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    |||||||||||||||||||||| |||||| ||||| |||||||||| ||||    
T  12080949 ggatttgctagaacacacccactagtttttatgtgggagtgttttagcaag 12080899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 184 - 234
Target Start/End: Complemental strand, 22479456 - 22479406
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    |||||||||||||||||||||| |||||| ||||| | |||||||||||||    
T  22479456 ggatttgctagaacacacccactagtttttatgtgggtgtgttttaacaag 22479406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 184 - 234
Target Start/End: Complemental strand, 24720511 - 24720461
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    |||||||||||||||||||||| |||||| ||||| |||||||||| ||||    
T  24720511 ggatttgctagaacacacccactagtttttatgtgggagtgttttagcaag 24720461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 184 - 234
Target Start/End: Original strand, 37138882 - 37138932
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    |||||||||||||||||||||| |||||| ||||| |||||||||| ||||    
T  37138882 ggatttgctagaacacacccactagtttttatgtgggagtgttttagcaag 37138932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 184 - 234
Target Start/End: Complemental strand, 38368090 - 38368040
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    |||||||||||||||||||||| |||||| ||||| |||||||||| ||||    
T  38368090 ggatttgctagaacacacccactagtttttatgtgggagtgttttagcaag 38368040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 11327846 - 11327797
Alignment:
Q  185 gatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    ||||||||||||||||||||| |||||| ||||| |||||||||| ||||    
T  11327846 gatttgctagaacacacccactagtttttatgtgggagtgttttagcaag 11327797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 184 - 229
Target Start/End: Complemental strand, 48454781 - 48454736
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgtttta 229  Q
    |||||||||||||||||||||| |||||| ||||| ||||||||||    
T  48454781 ggatttgctagaacacacccactagtttttatgtgggagtgtttta 48454736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 238
Target Start/End: Complemental strand, 2509552 - 2509500
Alignment:
Q  186 atttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    ||||||||||||||| |||| |||||| ||||| |||||||||| ||||||||    
T  2509552 atttgctagaacacatccactagttttgatgtgggagtgttttagcaagctac 2509500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 238
Target Start/End: Complemental strand, 18352548 - 18352496
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    ||||||||||||||||  |||| |||||| ||||| |||||||||||||||||||    
T  18352548 ggatttgctagaacac--ccactagtttttatgtgggagtgttttaacaagctac 18352496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 187 - 234
Target Start/End: Complemental strand, 34986773 - 34986726
Alignment:
Q  187 tttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    ||||||||||||||||||| |||||| ||||| |||||||||| ||||    
T  34986773 tttgctagaacacacccactagtttttatgtgggagtgttttagcaag 34986726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 454066 - 454120
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    |||||||||||||||||||||| | |||| ||||  |||||||||| ||||||||    
T  454066 ggatttgctagaacacacccactattttttatgtaggagtgttttagcaagctac 454120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 229
Target Start/End: Original strand, 4655009 - 4655051
Alignment:
Q  187 tttgctagaacacacccacaagttttcatgtgagagtgtttta 229  Q
    ||||||||||||||||||| |||||| ||||| ||||||||||    
T  4655009 tttgctagaacacacccactagtttttatgtgggagtgtttta 4655051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 234
Target Start/End: Complemental strand, 4655300 - 4655250
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    |||||||||||||||||||||| | |||| ||||| |||||||||| ||||    
T  4655300 ggatttgctagaacacacccactaatttttatgtgggagtgttttagcaag 4655250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 11766085 - 11766138
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    |||||||||||||||||||||| | |||| ||||| |||||||||| ||||||||    
T  11766085 ggatttgctagaacacacccactaatttttatgtg-gagtgttttagcaagctac 11766138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 234
Target Start/End: Complemental strand, 15230314 - 15230265
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    |||||||||||||||||||||| |||||| ||||| |||||||||| ||||    
T  15230314 ggatttgctagaacacacccactagtttttatgtg-gagtgttttagcaag 15230265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 229
Target Start/End: Original strand, 18199532 - 18199574
Alignment:
Q  187 tttgctagaacacacccacaagttttcatgtgagagtgtttta 229  Q
    ||||||||||||||||||| |||||| ||||| ||||||||||    
T  18199532 tttgctagaacacacccactagtttttatgtgggagtgtttta 18199574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 234
Target Start/End: Complemental strand, 18199823 - 18199773
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    ||||||| |||||||||||||| |||||| ||||| |||||||||| ||||    
T  18199823 ggatttgttagaacacacccactagtttttatgtgggagtgttttagcaag 18199773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 229
Target Start/End: Original strand, 27811906 - 27811948
Alignment:
Q  187 tttgctagaacacacccacaagttttcatgtgagagtgtttta 229  Q
    ||||||||||||||||||| |||||| ||||| ||||||||||    
T  27811906 tttgctagaacacacccactagtttttatgtgggagtgtttta 27811948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 234
Target Start/End: Complemental strand, 27812192 - 27812142
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    |||||||||||||||||||||| |||||| || || |||||||||| ||||    
T  27812192 ggatttgctagaacacacccactagtttttatatgggagtgttttagcaag 27812142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 234
Target Start/End: Complemental strand, 28605691 - 28605641
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    |||||||||||||||||||||| |||||| ||| |||| ||||||| ||||    
T  28605691 ggatttgctagaacacacccactagtttttatgagagaatgttttagcaag 28605641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 234
Target Start/End: Complemental strand, 32577820 - 32577770
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    |||||||||||||||||||||| |||||| ||||| || ||||||| ||||    
T  32577820 ggatttgctagaacacacccactagtttttatgtgggaatgttttagcaag 32577770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 41037320 - 41037374
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    ||||||||||||||||| |||| |||||| ||||| || ||||||| ||||||||    
T  41037320 ggatttgctagaacacatccactagtttttatgtgggaatgttttagcaagctac 41037374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 229
Target Start/End: Original strand, 45225224 - 45225266
Alignment:
Q  187 tttgctagaacacacccacaagttttcatgtgagagtgtttta 229  Q
    ||||||||||||||||||| |||||| ||||| ||||||||||    
T  45225224 tttgctagaacacacccactagtttttatgtgggagtgtttta 45225266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 234
Target Start/End: Complemental strand, 45225644 - 45225594
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    |||||||||||||||||||||| | |||| ||||| |||||||||| ||||    
T  45225644 ggatttgctagaacacacccactaatttttatgtgggagtgttttagcaag 45225594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 229
Target Start/End: Original strand, 7437744 - 7437789
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgtttta 229  Q
    |||||||||||||||||||||| |||||| ||||| |||| |||||    
T  7437744 ggatttgctagaacacacccactagtttttatgtgggagtatttta 7437789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 229
Target Start/End: Complemental strand, 20517171 - 20517126
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgtttta 229  Q
    |||||||||||||||||||||| | |||| ||||| ||||||||||    
T  20517171 ggatttgctagaacacacccactaatttttatgtgggagtgtttta 20517126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 4838233 - 4838287
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    |||||||||||||||||||||| |||||| ||||| |||||||||| ||||||||    
T  4838233 ggatttgctagaacacacccactagtttttatgtgggagtgttttagcaagctac 4838287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 33730479 - 33730533
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    |||||||||||||||||||||| |||||| ||||| |||||||||| ||||||||    
T  33730479 ggatttgctagaacacacccactagtttttatgtgggagtgttttagcaagctac 33730533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 238
Target Start/End: Original strand, 18154503 - 18154556
Alignment:
Q  185 gatttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    ||||||||||||||||||||| |||||| ||||| |||||||||| ||||||||    
T  18154503 gatttgctagaacacacccactagtttttatgtgggagtgttttagcaagctac 18154556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 191 - 234
Target Start/End: Original strand, 1369855 - 1369898
Alignment:
Q  191 ctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    |||||||||||||||||||||| |||||||||||||||| ||||    
T  1369855 ctagaacacacccacaagtttttatgtgagagtgttttagcaag 1369898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 187 - 229
Target Start/End: Complemental strand, 1370134 - 1370092
Alignment:
Q  187 tttgctagaacacacccacaagttttcatgtgagagtgtttta 229  Q
    ||||||||||||||||||| |||||| ||||||||||||||||    
T  1370134 tttgctagaacacacccactagtttttatgtgagagtgtttta 1370092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 184 - 234
Target Start/End: Original strand, 15881875 - 15881925
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    |||||||||||||||||||||| |||||| ||||| |||||||||| ||||    
T  15881875 ggatttgctagaacacacccactagtttttatgtgggagtgttttagcaag 15881925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 15882121 - 15882075
Alignment:
Q  187 tttgctagaacacacccacaagttttcatgtgagagtgttttaacaa 233  Q
    ||||||||||||||||||| |||||| ||||| ||||||||||||||    
T  15882121 tttgctagaacacacccactagtttttatgtgggagtgttttaacaa 15882075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 29646178 - 29646224
Alignment:
Q  187 tttgctagaacacacccacaagttttcatgtgagagtgttttaacaa 233  Q
    ||||||||||||||||||| |||||| ||||| ||||||||||||||    
T  29646178 tttgctagaacacacccactagtttttatgtgggagtgttttaacaa 29646224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 16599019 - 16599068
Alignment:
Q  185 gatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    ||||||||||||||||||||| | |||| ||||| |||||||||||||||    
T  16599019 gatttgctagaacacacccactaatttttatgtgggagtgttttaacaag 16599068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 184 - 229
Target Start/End: Complemental strand, 31133115 - 31133070
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgtttta 229  Q
    |||||||||||||||||||||| |||||| ||||| ||||||||||    
T  31133115 ggatttgctagaacacacccactagtttttatgtgggagtgtttta 31133070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 187 - 234
Target Start/End: Original strand, 20755358 - 20755405
Alignment:
Q  187 tttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    ||||||||||||||||||| |||||| ||| | |||||||||||||||    
T  20755358 tttgctagaacacacccactagtttttatgcgggagtgttttaacaag 20755405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 234
Target Start/End: Original strand, 11100329 - 11100379
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    ||||||| |||||||||||||| |||||| ||||| |||||||||| ||||    
T  11100329 ggatttgttagaacacacccactagtttttatgtgggagtgttttagcaag 11100379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 18102646 - 18102700
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    ||||||||||||||||| | || |||||| ||||| |||||||||| ||||||||    
T  18102646 ggatttgctagaacacatcgactagtttttatgtgggagtgttttagcaagctac 18102700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 229
Target Start/End: Complemental strand, 20755591 - 20755549
Alignment:
Q  187 tttgctagaacacacccacaagttttcatgtgagagtgtttta 229  Q
    ||||||||||||||||||| |||||| ||||| ||||||||||    
T  20755591 tttgctagaacacacccactagtttttatgtgggagtgtttta 20755549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 234
Target Start/End: Complemental strand, 29646464 - 29646414
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    |||||||||||||||||||||| | |||| ||||| |||||||||| ||||    
T  29646464 ggatttgctagaacacacccactaatttttatgtgggagtgttttagcaag 29646414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 9955745 - 9955794
Alignment:
Q  185 gatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    ||||||||||||||||||||| | |||| ||||| |||||||||| ||||    
T  9955745 gatttgctagaacacacccactaatttttatgtgggagtgttttagcaag 9955794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 185 - 238
Target Start/End: Complemental strand, 11010150 - 11010097
Alignment:
Q  185 gatttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    ||||||||| ||||||||||| |||||| || || |||||||||| ||||||||    
T  11010150 gatttgctataacacacccactagtttttatatgggagtgttttagcaagctac 11010097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 15962687 - 15962736
Alignment:
Q  185 gatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    ||||||||||||||||||||| | |||  ||||| |||||||||||||||    
T  15962687 gatttgctagaacacacccactaatttgtatgtgggagtgttttaacaag 15962736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 187 - 236
Target Start/End: Complemental strand, 30525586 - 30525537
Alignment:
Q  187 tttgctagaacacacccacaagttttcatgtgagagtgttttaacaagct 236  Q
    ||||||||||||||||||  |||||| ||||| |||||||||| ||||||    
T  30525586 tttgctagaacacacccattagtttttatgtgggagtgttttagcaagct 30525537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 234
Target Start/End: Complemental strand, 8172122 - 8172074
Alignment:
Q  186 atttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    |||| ||||||||||||||| |||||| ||||| |||||||||| ||||    
T  8172122 attttctagaacacacccactagtttttatgtgggagtgttttagcaag 8172074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 238
Target Start/End: Original strand, 32194175 - 32194227
Alignment:
Q  186 atttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    ||||||||||||||| |||| ||||||||||||  |||||||||  |||||||    
T  32194175 atttgctagaacacatccactagttttcatgtggaagtgttttagtaagctac 32194227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 184 - 234
Target Start/End: Complemental strand, 26906132 - 26906082
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    |||||||||||||||||||||| |||||| ||||| |||||||||||||||    
T  26906132 ggatttgctagaacacacccactagtttttatgtgggagtgttttaacaag 26906082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 28747708 - 28747762
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    ||||||||||||||||||||||  ||||| |||||||||||||||| ||||||||    
T  28747708 ggatttgctagaacacacccacttgtttttatgtgagagtgttttagcaagctac 28747762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 184 - 234
Target Start/End: Complemental strand, 33026466 - 33026416
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    ||||||||||||||||||| || |||||||||||| |||||||||||||||    
T  33026466 ggatttgctagaacacacctactagttttcatgtgggagtgttttaacaag 33026416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 238
Target Start/End: Original strand, 6436370 - 6436423
Alignment:
Q  185 gatttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    ||||||||||||||||||||| |||||| ||||| |||||||||| ||||||||    
T  6436370 gatttgctagaacacacccactagtttttatgtgggagtgttttagcaagctac 6436423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 187 - 238
Target Start/End: Original strand, 4737881 - 4737932
Alignment:
Q  187 tttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    ||||||||||||||||||| |||||| ||||| |||||||||| ||||||||    
T  4737881 tttgctagaacacacccactagtttttatgtgggagtgttttagcaagctac 4737932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 3038833 - 3038887
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    ||||||||||||||| |||||| |||||| ||||| |||||||||| ||||||||    
T  3038833 ggatttgctagaacatacccactagtttttatgtgggagtgttttagcaagctac 3038887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 184 - 234
Target Start/End: Complemental strand, 4737029 - 4736979
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    |||||||||||||||||||||| |||||| ||||| |||||||||| ||||    
T  4737029 ggatttgctagaacacacccactagtttttatgtgggagtgttttagcaag 4736979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 14369713 - 14369767
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    ||||||||||||| |||||| | |||||||||||| |||||||||| ||||||||    
T  14369713 ggatttgctagaagacacccgctagttttcatgtgggagtgttttagcaagctac 14369767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 17421640 - 17421694
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    |||||||||||||||||||||| |||||| ||||| ||||| |||| ||||||||    
T  17421640 ggatttgctagaacacacccactagtttttatgtgggagtgatttagcaagctac 17421694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 188 - 238
Target Start/End: Complemental strand, 31240476 - 31240426
Alignment:
Q  188 ttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    ||||||||||||| |||| |||||| |||||||||||||||| ||||||||    
T  31240476 ttgctagaacacatccactagtttttatgtgagagtgttttagcaagctac 31240426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 37468491 - 37468545
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    |||||||||| ||||||||||| |||||| ||||| |||||||||| ||||||||    
T  37468491 ggatttgctaaaacacacccactagtttttatgtgggagtgttttagcaagctac 37468545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 184 - 238
Target Start/End: Complemental strand, 40234310 - 40234256
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    |||||||||||||||||||||| |||||| ||||| |||||||||| ||| ||||    
T  40234310 ggatttgctagaacacacccactagtttttatgtgggagtgttttagcaaactac 40234256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 185 - 238
Target Start/End: Complemental strand, 13711268 - 13711215
Alignment:
Q  185 gatttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    ||||| |||||||||||||||  ||||| |||||||||||||||| ||||||||    
T  13711268 gatttactagaacacacccactggtttttatgtgagagtgttttagcaagctac 13711215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 7014740 - 7014688
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaagct 236  Q
    ||||||||||||||||||  || |||||| |||||||||||||||| ||||||    
T  7014740 ggatttgctagaacacacatactagtttttatgtgagagtgttttagcaagct 7014688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 187 - 238
Target Start/End: Complemental strand, 12910255 - 12910204
Alignment:
Q  187 tttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    |||| |||||||||||||| |||||| ||||| |||||||||| ||||||||    
T  12910255 tttgttagaacacacccactagtttttatgtgggagtgttttagcaagctac 12910204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 234
Target Start/End: Original strand, 857855 - 857905
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    |||||||||||||||||||||| |||||  ||||| |||||||||| ||||    
T  857855 ggatttgctagaacacacccactagtttgtatgtgggagtgttttagcaag 857905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 234
Target Start/End: Complemental strand, 1921698 - 1921648
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    ||||||||||||||||||| || |||||| ||||| |||||||||| ||||    
T  1921698 ggatttgctagaacacacctactagtttttatgtgggagtgttttagcaag 1921648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 234
Target Start/End: Original strand, 2528713 - 2528763
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    ||||||||||||||||| |||| |||||| ||||| |||||||||| ||||    
T  2528713 ggatttgctagaacacatccactagtttttatgtgggagtgttttagcaag 2528763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 6261226 - 6261176
Alignment:
Q  185 gatttgctagaacacacccacaagttttcatgtgagagtgttttaacaagc 235  Q
    |||||||||||||||||| || | |||| |||||||||||||||| |||||    
T  6261226 gatttgctagaacacacctactattttttatgtgagagtgttttagcaagc 6261176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 238
Target Start/End: Complemental strand, 17233148 - 17233094
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    ||||||| |||||||||||||| |||||| ||||  |||||||||| ||||||||    
T  17233148 ggatttggtagaacacacccactagtttttatgtaggagtgttttagcaagctac 17233094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 22213212 - 22213166
Alignment:
Q  187 tttgctagaacacacccacaagttttcatgtgagagtgttttaacaa 233  Q
    ||||||||||||||||||| | |||| | ||||||||||||||||||    
T  22213212 tttgctagaacacacccactaatttttaagtgagagtgttttaacaa 22213166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 234
Target Start/End: Complemental strand, 25912278 - 25912228
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    ||||||||||||||||||| || |||||| ||||| |||||||||| ||||    
T  25912278 ggatttgctagaacacacctactagtttttatgtgggagtgttttagcaag 25912228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 229
Target Start/End: Complemental strand, 29302340 - 29302298
Alignment:
Q  187 tttgctagaacacacccacaagttttcatgtgagagtgtttta 229  Q
    ||||||||||||||||||| |||||| ||||| ||||||||||    
T  29302340 tttgctagaacacacccactagtttttatgtgggagtgtttta 29302298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 229
Target Start/End: Original strand, 30486061 - 30486103
Alignment:
Q  187 tttgctagaacacacccacaagttttcatgtgagagtgtttta 229  Q
    ||||||||||||||||||| |||||| ||||| ||||||||||    
T  30486061 tttgctagaacacacccactagtttttatgtgggagtgtttta 30486103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 229
Target Start/End: Complemental strand, 33833289 - 33833247
Alignment:
Q  187 tttgctagaacacacccacaagttttcatgtgagagtgtttta 229  Q
    ||||||||||||||||||| |||||| ||||| ||||||||||    
T  33833289 tttgctagaacacacccactagtttttatgtgggagtgtttta 33833247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 234
Target Start/End: Complemental strand, 37249540 - 37249490
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    |||||||||||||||||||||| | |||| ||||| |||||||||| ||||    
T  37249540 ggatttgctagaacacacccactaatttttatgtgggagtgttttagcaag 37249490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 234
Target Start/End: Complemental strand, 37282417 - 37282367
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    |||||||||| ||||||||||| |||||| ||||| |||||||||| ||||    
T  37282417 ggatttgctacaacacacccactagtttttatgtgggagtgttttagcaag 37282367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 229
Target Start/End: Original strand, 39999188 - 39999230
Alignment:
Q  187 tttgctagaacacacccacaagttttcatgtgagagtgtttta 229  Q
    ||||||||||||||||||| |||||| ||||| ||||||||||    
T  39999188 tttgctagaacacacccactagtttttatgtgggagtgtttta 39999230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 185 - 238
Target Start/End: Complemental strand, 8410853 - 8410800
Alignment:
Q  185 gatttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    |||||| | |||||||||||| |||||| ||||| |||||||||| ||||||||    
T  8410853 gatttgttggaacacacccactagtttttatgtgggagtgttttagcaagctac 8410800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 185 - 238
Target Start/End: Original strand, 31752393 - 31752446
Alignment:
Q  185 gatttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    |||||||||||||||| |||| |||||| ||||| |||||||||| ||| ||||    
T  31752393 gatttgctagaacacaaccactagtttttatgtgggagtgttttagcaaactac 31752446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 234
Target Start/End: Complemental strand, 15809207 - 15809159
Alignment:
Q  186 atttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    ||||||||||||||| |||| |||||| ||||| |||||||||| ||||    
T  15809207 atttgctagaacacatccactagtttttatgtgggagtgttttagcaag 15809159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 3800147 - 3800201
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    |||||||||||||||||||||| |||||| ||||| |||||||||| ||||||||    
T  3800147 ggatttgctagaacacacccactagtttttatgtgggagtgttttagcaagctac 3800201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 184 - 234
Target Start/End: Original strand, 30347724 - 30347774
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    |||||||||||||||||||||| |||||| ||||| |||||||||||||||    
T  30347724 ggatttgctagaacacacccactagtttttatgtgggagtgttttaacaag 30347774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 184 - 237
Target Start/End: Original strand, 27359948 - 27360001
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaagcta 237  Q
    |||||||||||||||||||||| |||||| ||||| |||||||||| |||||||    
T  27359948 ggatttgctagaacacacccactagtttttatgtgggagtgttttagcaagcta 27360001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 238
Target Start/End: Original strand, 53581511 - 53581564
Alignment:
Q  185 gatttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    ||||||||||||||||||||| |||||| ||||| |||||||||| ||||||||    
T  53581511 gatttgctagaacacacccactagtttttatgtgggagtgttttagcaagctac 53581564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 232
Target Start/End: Original strand, 45059483 - 45059530
Alignment:
Q  185 gatttgctagaacacacccacaagttttcatgtgagagtgttttaaca 232  Q
    ||||||||||||||||||||| |||||| ||||| |||||||||||||    
T  45059483 gatttgctagaacacacccactagtttttatgtgggagtgttttaaca 45059530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 184 - 238
Target Start/End: Complemental strand, 1376239 - 1376185
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    |||||||||||||||||||||| |||||| ||||| |||||||||| | ||||||    
T  1376239 ggatttgctagaacacacccactagtttttatgtgggagtgttttagctagctac 1376185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 36823906 - 36823960
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    ||||||||||||||||||| || |||||| ||||| |||||||||| ||||||||    
T  36823906 ggatttgctagaacacaccaactagtttttatgtgggagtgttttagcaagctac 36823960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 6748601 - 6748650
Alignment:
Q  185 gatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    ||||||||||||||||||||| |||||| ||||| |||||||||| ||||    
T  6748601 gatttgctagaacacacccactagtttttatgtgggagtgttttagcaag 6748650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 185 - 238
Target Start/End: Original strand, 17604884 - 17604937
Alignment:
Q  185 gatttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    |||||||||||||||| |||| |||||| ||||| |||||||||| ||||||||    
T  17604884 gatttgctagaacacatccactagtttttatgtgggagtgttttagcaagctac 17604937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 184 - 229
Target Start/End: Complemental strand, 45293197 - 45293152
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgtttta 229  Q
    |||||||||||||||||||||| |||||| ||||| ||||||||||    
T  45293197 ggatttgctagaacacacccactagtttttatgtgggagtgtttta 45293152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 234
Target Start/End: Original strand, 994674 - 994722
Alignment:
Q  186 atttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    |||||||||||||||||||| | |||| ||||| |||||||||||||||    
T  994674 atttgctagaacacacccactaatttttatgtgggagtgttttaacaag 994722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 234
Target Start/End: Complemental strand, 7848769 - 7848721
Alignment:
Q  186 atttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    |||||||||||||||||||| |||||| ||||| |||||||||| ||||    
T  7848769 atttgctagaacacacccactagtttttatgtgggagtgttttagcaag 7848721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 13349086 - 13349138
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaagct 236  Q
    ||||||||||||||||||||||  ||||| ||||| |||||||||| ||||||    
T  13349086 ggatttgctagaacacacccactggtttttatgtgggagtgttttagcaagct 13349138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 234
Target Start/End: Complemental strand, 48649536 - 48649488
Alignment:
Q  186 atttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    |||||||||||||||||| | |||||| ||||| |||||||||||||||    
T  48649536 atttgctagaacacaccctctagtttttatgtgggagtgttttaacaag 48649488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 238
Target Start/End: Complemental strand, 48765452 - 48765400
Alignment:
Q  186 atttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    |||||||||||||||||||| |||||| ||||| |||| ||||| ||||||||    
T  48765452 atttgctagaacacacccactagtttttatgtgtgagtattttagcaagctac 48765400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 187 - 238
Target Start/End: Complemental strand, 31039795 - 31039744
Alignment:
Q  187 tttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    ||||||||||||||||||| |||||| ||||  |||||||||| ||||||||    
T  31039795 tttgctagaacacacccactagtttttatgtaggagtgttttagcaagctac 31039744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 229
Target Start/End: Original strand, 4043586 - 4043628
Alignment:
Q  187 tttgctagaacacacccacaagttttcatgtgagagtgtttta 229  Q
    ||||||||||||||||||| |||||| ||||| ||||||||||    
T  4043586 tttgctagaacacacccactagtttttatgtgggagtgtttta 4043628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 229
Target Start/End: Complemental strand, 6109401 - 6109359
Alignment:
Q  187 tttgctagaacacacccacaagttttcatgtgagagtgtttta 229  Q
    ||||||||||||||||||| |||||| ||||| ||||||||||    
T  6109401 tttgctagaacacacccactagtttttatgtgggagtgtttta 6109359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 234
Target Start/End: Complemental strand, 6115026 - 6114976
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    |||||||||||||||||||||| | |||| ||||| |||||||||| ||||    
T  6115026 ggatttgctagaacacacccactaatttttatgtgggagtgttttagcaag 6114976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 234
Target Start/End: Complemental strand, 7521603 - 7521553
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    |||||||||||||||||||||| | |||| ||||| |||| ||||||||||    
T  7521603 ggatttgctagaacacacccactaatttttatgtgggagtattttaacaag 7521553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 229
Target Start/End: Original strand, 8815290 - 8815332
Alignment:
Q  187 tttgctagaacacacccacaagttttcatgtgagagtgtttta 229  Q
    ||||||||||||||||||| |||||| ||||| ||||||||||    
T  8815290 tttgctagaacacacccactagtttttatgtgggagtgtttta 8815332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 234
Target Start/End: Complemental strand, 8815575 - 8815525
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    ||||||||| |||||||||||| |||||| ||||| |||||||||| ||||    
T  8815575 ggatttgctcgaacacacccactagtttttatgtgggagtgttttagcaag 8815525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 234
Target Start/End: Complemental strand, 17065970 - 17065920
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    ||||||||||||||||| |||| |||||| ||||| |||||||||| ||||    
T  17065970 ggatttgctagaacacatccactagtttttatgtgggagtgttttagcaag 17065920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 234
Target Start/End: Original strand, 17226152 - 17226202
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    |||||||||||||||||||||| | |||| ||||| |||||||||| ||||    
T  17226152 ggatttgctagaacacacccactaatttttatgtgggagtgttttagcaag 17226202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 229
Target Start/End: Complemental strand, 21408719 - 21408677
Alignment:
Q  187 tttgctagaacacacccacaagttttcatgtgagagtgtttta 229  Q
    ||||||||||||||||||| |||||| ||||| ||||||||||    
T  21408719 tttgctagaacacacccactagtttttatgtgggagtgtttta 21408677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 229
Target Start/End: Original strand, 21727603 - 21727645
Alignment:
Q  187 tttgctagaacacacccacaagttttcatgtgagagtgtttta 229  Q
    ||||||||||||||||||| |||||| ||||| ||||||||||    
T  21727603 tttgctagaacacacccactagtttttatgtgggagtgtttta 21727645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 234
Target Start/End: Complemental strand, 21727890 - 21727840
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    |||||||||||||||||||||| | |||| ||||| |||||||||| ||||    
T  21727890 ggatttgctagaacacacccactaatttttatgtgggagtgttttagcaag 21727840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 234
Target Start/End: Original strand, 26152460 - 26152510
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    |||||||||||||||||||||| | |||| ||||| |||||||||| ||||    
T  26152460 ggatttgctagaacacacccactaatttttatgtgggagtgttttagcaag 26152510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 229
Target Start/End: Complemental strand, 26158469 - 26158427
Alignment:
Q  187 tttgctagaacacacccacaagttttcatgtgagagtgtttta 229  Q
    ||||||||||||||||||| |||||| ||||| ||||||||||    
T  26158469 tttgctagaacacacccactagtttttatgtgggagtgtttta 26158427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 234
Target Start/End: Complemental strand, 27728438 - 27728388
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    ||||||||||||||||||||||  ||||| ||||| |||||||||| ||||    
T  27728438 ggatttgctagaacacacccacttgttttaatgtgggagtgttttagcaag 27728388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 229
Target Start/End: Original strand, 47461652 - 47461694
Alignment:
Q  187 tttgctagaacacacccacaagttttcatgtgagagtgtttta 229  Q
    ||||||||||||||||||| |||||| ||||| ||||||||||    
T  47461652 tttgctagaacacacccactagtttttatgtgggagtgtttta 47461694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 234
Target Start/End: Complemental strand, 47461939 - 47461889
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    |||||||||||||||||||||| |||||| ||||| || ||||||| ||||    
T  47461939 ggatttgctagaacacacccactagtttttatgtgggaatgttttagcaag 47461889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 229
Target Start/End: Original strand, 3544243 - 3544288
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgtttta 229  Q
    |||||||||||||||||| ||| |||||| ||||| ||||||||||    
T  3544243 ggatttgctagaacacactcactagtttttatgtgggagtgtttta 3544288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 6109115 - 6109164
Alignment:
Q  185 gatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    ||||||||||||||||||||| | |||| ||||| |||||||||| ||||    
T  6109115 gatttgctagaacacacccactaatttttatgtgggagtgttttagcaag 6109164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 12896881 - 12896832
Alignment:
Q  185 gatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    ||||||||||||||||||||| |||||| |||||  ||||||||| ||||    
T  12896881 gatttgctagaacacacccactagtttttatgtggaagtgttttagcaag 12896832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 185 - 238
Target Start/End: Complemental strand, 22894989 - 22894936
Alignment:
Q  185 gatttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    |||||||||||| |||||||| | |||| ||||| |||||||||| ||||||||    
T  22894989 gatttgctagaatacacccactaatttttatgtgggagtgttttagcaagctac 22894936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 229
Target Start/End: Original strand, 26152147 - 26152192
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgtttta 229  Q
    |||||| ||| ||||||||||| |||||| ||||||||||||||||    
T  26152147 ggatttactaaaacacacccactagtttttatgtgagagtgtttta 26152192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 185 - 238
Target Start/End: Complemental strand, 33838054 - 33838001
Alignment:
Q  185 gatttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    ||||||||||||||||| ||| |||||| ||||  |||||||||| ||||||||    
T  33838054 gatttgctagaacacacgcactagtttttatgtaggagtgttttagcaagctac 33838001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 51952445 - 51952397
Alignment:
Q  185 gatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    |||||||||||||||||| || |||||| |||||| ||||||||||||||    
T  51952445 gatttgctagaacacacctactagtttt-atgtgaaagtgttttaacaag 51952397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 234
Target Start/End: Complemental strand, 4043878 - 4043830
Alignment:
Q  186 atttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    |||||||||||||||||||| | | || |||||||||||||||| ||||    
T  4043878 atttgctagaacacacccactaatatttatgtgagagtgttttagcaag 4043830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 234
Target Start/End: Original strand, 12127507 - 12127555
Alignment:
Q  186 atttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    |||||||| ||||||||||| |||||| ||||| |||||||||| ||||    
T  12127507 atttgctaaaacacacccactagtttttatgtgggagtgttttagcaag 12127555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000001; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 238
Target Start/End: Complemental strand, 33740186 - 33740133
Alignment:
Q  185 gatttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    ||||||||||||||||||||| |||||| ||||| |||||||||| ||||||||    
T  33740186 gatttgctagaacacacccactagtttttatgtgggagtgttttagcaagctac 33740133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 187 - 238
Target Start/End: Complemental strand, 41927609 - 41927558
Alignment:
Q  187 tttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    ||||||||||||||||||| |||||| ||||| |||||||||| ||||||||    
T  41927609 tttgctagaacacacccactagtttttatgtgggagtgttttagcaagctac 41927558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 1750150 - 1750204
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    |||||||||| ||||||||||| |||||| | |||||||||||||| ||||||||    
T  1750150 ggatttgctaaaacacacccactagtttttaggtgagagtgttttagcaagctac 1750204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 16513035 - 16513089
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    |||||||||||||||||||||| |||||| | ||| |||||||||| ||||||||    
T  16513035 ggatttgctagaacacacccactagtttttacgtgggagtgttttagcaagctac 16513089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 184 - 234
Target Start/End: Original strand, 23175352 - 23175402
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    |||||||||||||||||||||| |||||| ||||| |||||||||| ||||    
T  23175352 ggatttgctagaacacacccactagtttttatgtgggagtgttttagcaag 23175402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 184 - 234
Target Start/End: Original strand, 23586609 - 23586659
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    |||||||||||||||||||||| |||||| ||||| |||||||||| ||||    
T  23586609 ggatttgctagaacacacccactagtttttatgtgggagtgttttagcaag 23586659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 184 - 238
Target Start/End: Complemental strand, 34082800 - 34082746
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    |||||||||||||||||||||| |||||| |||||  ||||||||| ||||||||    
T  34082800 ggatttgctagaacacacccactagtttttatgtggtagtgttttagcaagctac 34082746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 184 - 234
Target Start/End: Original strand, 39906229 - 39906279
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    |||||||||||||||||||||| | |||| ||||| |||||||||||||||    
T  39906229 ggatttgctagaacacacccactaatttttatgtgggagtgttttaacaag 39906279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 18370464 - 18370415
Alignment:
Q  185 gatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    ||||||||||||||||||||| |||||| ||||| |||||||||| ||||    
T  18370464 gatttgctagaacacacccactagtttttatgtgggagtgttttagcaag 18370415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 30406422 - 30406471
Alignment:
Q  185 gatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    |||||| |||||||||||||| |||||| |||||||||||||||| ||||    
T  30406422 gatttgttagaacacacccactagtttttatgtgagagtgttttagcaag 30406471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 187 - 234
Target Start/End: Original strand, 19630715 - 19630762
Alignment:
Q  187 tttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    ||||||||||||||||||| |||||| ||||| |||||||||| ||||    
T  19630715 tttgctagaacacacccactagtttttatgtgggagtgttttagcaag 19630762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 187 - 234
Target Start/End: Original strand, 19827616 - 19827663
Alignment:
Q  187 tttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    ||||||||||||||||||| |||||| ||||| |||||||||| ||||    
T  19827616 tttgctagaacacacccactagtttttatgtgggagtgttttagcaag 19827663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 187 - 234
Target Start/End: Complemental strand, 39904898 - 39904851
Alignment:
Q  187 tttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    ||||||||||||||||||  |||||| |||||||||||||||| ||||    
T  39904898 tttgctagaacacacccattagtttttatgtgagagtgttttagcaag 39904851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 234
Target Start/End: Original strand, 7681965 - 7682015
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    |||||||||||||||||||||  |||||| ||||| |||||||||| ||||    
T  7681965 ggatttgctagaacacacccattagtttttatgtgggagtgttttagcaag 7682015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 238
Target Start/End: Complemental strand, 8386929 - 8386879
Alignment:
Q  188 ttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    |||||||||||||||||  |||||| ||||| |||||||||| ||||||||    
T  8386929 ttgctagaacacacccattagtttttatgtgggagtgttttatcaagctac 8386879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 234
Target Start/End: Original strand, 9689335 - 9689385
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    |||||||||||||||||||| | |||||| ||||| |||||||||| ||||    
T  9689335 ggatttgctagaacacacccgctagtttttatgtgggagtgttttagcaag 9689385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 9690404 - 9690358
Alignment:
Q  187 tttgctagaacacacccacaagttttcatgtgagagtgttttaacaa 233  Q
    ||||||||||||||||||| |||||| ||||| |||| |||||||||    
T  9690404 tttgctagaacacacccactagtttttatgtgggagtattttaacaa 9690358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 22711279 - 22711233
Alignment:
Q  187 tttgctagaacacacccacaagttttcatgtgagagtgttttaacaa 233  Q
    ||||||||||||||||||| | |||| ||||| ||||||||||||||    
T  22711279 tttgctagaacacacccactaatttttatgtgggagtgttttaacaa 22711233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 238
Target Start/End: Complemental strand, 37169789 - 37169735
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    ||||||||||||||||| |||| | |||| ||||| |||||| ||||||||||||    
T  37169789 ggatttgctagaacacatccactaatttttatgtgggagtgtcttaacaagctac 37169735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 229
Target Start/End: Complemental strand, 39906516 - 39906474
Alignment:
Q  187 tttgctagaacacacccacaagttttcatgtgagagtgtttta 229  Q
    ||||||||||||||||||| |||||| ||||| ||||||||||    
T  39906516 tttgctagaacacacccactagtttttatgtgggagtgtttta 39906474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 238
Target Start/End: Complemental strand, 42850249 - 42850195
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    ||||||||||||| |||||||  |||||| ||||| |||||||||| ||||||||    
T  42850249 ggatttgctagaatacacccattagtttttatgtgggagtgttttagcaagctac 42850195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 234
Target Start/End: Complemental strand, 44257706 - 44257656
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    |||||| ||||||||||||||| |||||| ||||| |||||||||| ||||    
T  44257706 ggattttctagaacacacccactagtttttatgtgggagtgttttagcaag 44257656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 229
Target Start/End: Original strand, 44542809 - 44542851
Alignment:
Q  187 tttgctagaacacacccacaagttttcatgtgagagtgtttta 229  Q
    ||||||||||||||||||| |||||| ||||| ||||||||||    
T  44542809 tttgctagaacacacccactagtttttatgtgggagtgtttta 44542851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 234
Target Start/End: Complemental strand, 44543095 - 44543045
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    |||||||||||| ||||||||| |||||| ||||| |||||||||| ||||    
T  44543095 ggatttgctagagcacacccactagtttttatgtgggagtgttttagcaag 44543045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 229
Target Start/End: Original strand, 41527820 - 41527865
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgtttta 229  Q
    |||||||||||||||||||||| | |||| ||||| ||||||||||    
T  41527820 ggatttgctagaacacacccactaatttttatgtgggagtgtttta 41527865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 229
Target Start/End: Original strand, 3769412 - 3769456
Alignment:
Q  185 gatttgctagaacacacccacaagttttcatgtgagagtgtttta 229  Q
    ||||||||||||||||||||| |||||| ||||| ||||| ||||    
T  3769412 gatttgctagaacacacccactagtttttatgtgggagtgcttta 3769456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 238
Target Start/End: Original strand, 27337049 - 27337101
Alignment:
Q  186 atttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    ||||| ||||||||||||||  ||||| ||||| |||||||||| ||||||||    
T  27337049 atttgttagaacacacccactggtttttatgtgggagtgttttagcaagctac 27337101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000001; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 238
Target Start/End: Complemental strand, 463546 - 463493
Alignment:
Q  185 gatttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    ||||||||||||||||||||| |||||| ||||| |||||||||| ||||||||    
T  463546 gatttgctagaacacacccactagtttttatgtgggagtgttttagcaagctac 463493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 187 - 238
Target Start/End: Complemental strand, 32994402 - 32994351
Alignment:
Q  187 tttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    ||||||||||||||||||| |||||| ||||| |||||||||| ||||||||    
T  32994402 tttgctagaacacacccactagtttttatgtgggagtgttttagcaagctac 32994351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 8642957 - 8643011
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    |||||||||||||||||||||| |||||| || || |||||||||| ||||||||    
T  8642957 ggatttgctagaacacacccactagtttttatatgggagtgttttagcaagctac 8643011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 10764560 - 10764606
Alignment:
Q  187 tttgctagaacacacccacaagttttcatgtgagagtgttttaacaa 233  Q
    |||||||||| |||||||| |||||| ||||||||||||||||||||    
T  10764560 tttgctagaagacacccactagtttttatgtgagagtgttttaacaa 10764606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 184 - 238
Target Start/End: Complemental strand, 13157794 - 13157740
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    ||||||||||||||||||| || |||||| ||||| |||||||||| ||||||||    
T  13157794 ggatttgctagaacacacctactagtttttatgtgggagtgttttagcaagctac 13157740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 184 - 234
Target Start/End: Complemental strand, 13385973 - 13385923
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    |||||||||||||||||||||| |||||| ||||| |||||||||| ||||    
T  13385973 ggatttgctagaacacacccactagtttttatgtgggagtgttttagcaag 13385923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 13943495 - 13943449
Alignment:
Q  187 tttgctagaacacacccacaagttttcatgtgagagtgttttaacaa 233  Q
    ||||||||||||||||||| |||||| ||||| ||||||||||||||    
T  13943495 tttgctagaacacacccactagtttttatgtgggagtgttttaacaa 13943449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 16005525 - 16005579
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    |||||||||||||||||||||| |||||| ||||   ||||||||||||||||||    
T  16005525 ggatttgctagaacacacccactagtttttatgtagaagtgttttaacaagctac 16005579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 184 - 238
Target Start/End: Complemental strand, 24770864 - 24770810
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    ||||||| |||||||||| ||| |||||| |||||||||||||||| ||||||||    
T  24770864 ggatttggtagaacacactcactagtttttatgtgagagtgttttagcaagctac 24770810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 184 - 234
Target Start/End: Complemental strand, 27389728 - 27389678
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    |||||||||||||||||||||| |||||| ||||| |||||||||| ||||    
T  27389728 ggatttgctagaacacacccactagtttttatgtgggagtgttttagcaag 27389678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 184 - 238
Target Start/End: Complemental strand, 34515365 - 34515311
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    |||||||||| ||||||||||| |||||| ||||| |||||||||| ||||||||    
T  34515365 ggatttgctataacacacccactagtttttatgtgggagtgttttagcaagctac 34515311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 184 - 234
Target Start/End: Original strand, 36817596 - 36817646
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    |||||||||||||||||||||| | |||| |||||||||||||||| ||||    
T  36817596 ggatttgctagaacacacccactaatttttatgtgagagtgttttagcaag 36817646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 184 - 237
Target Start/End: Complemental strand, 50559484 - 50559431
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaagcta 237  Q
    |||||||||||||||||||||| |||||| ||||  |||||||||| |||||||    
T  50559484 ggatttgctagaacacacccactagtttttatgtaggagtgttttagcaagcta 50559431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 229
Target Start/End: Complemental strand, 14494602 - 14494560
Alignment:
Q  187 tttgctagaacacacccacaagttttcatgtgagagtgtttta 229  Q
    ||||||||||||||||||| |||||| ||||| ||||||||||    
T  14494602 tttgctagaacacacccactagtttttatgtgggagtgtttta 14494560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 234
Target Start/End: Original strand, 20411143 - 20411193
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    |||||||||||||||||||||| | |||| ||||| |||||||||| ||||    
T  20411143 ggatttgctagaacacacccactaatttttatgtgggagtgttttagcaag 20411193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 229
Target Start/End: Complemental strand, 20411430 - 20411388
Alignment:
Q  187 tttgctagaacacacccacaagttttcatgtgagagtgtttta 229  Q
    ||||||||||||||||||| |||||| ||||| ||||||||||    
T  20411430 tttgctagaacacacccactagtttttatgtgggagtgtttta 20411388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 234
Target Start/End: Original strand, 27255598 - 27255648
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    |||||||||||||||||||||| | |||| ||||| |||||||||| ||||    
T  27255598 ggatttgctagaacacacccactaatttttatgtgggagtgttttagcaag 27255648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 234
Target Start/End: Original strand, 32374489 - 32374539
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    |||||||||||||||||||||| |||||| |||||  ||||||||| ||||    
T  32374489 ggatttgctagaacacacccactagtttttatgtggaagtgttttagcaag 32374539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 229
Target Start/End: Complemental strand, 36817883 - 36817841
Alignment:
Q  187 tttgctagaacacacccacaagttttcatgtgagagtgtttta 229  Q
    ||||||||||||||| ||| |||||| ||||||||||||||||    
T  36817883 tttgctagaacacactcactagtttttatgtgagagtgtttta 36817841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 234
Target Start/End: Original strand, 39424216 - 39424265
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    |||||||||||||||||||||| |||||| ||||| |||||||||| ||||    
T  39424216 ggatttgctagaacacacccactagtttttatgtg-gagtgttttagcaag 39424265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 41146211 - 41146265
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    ||||||||||||| |||||||| |||||| || || |||||||||| ||||||||    
T  41146211 ggatttgctagaaaacacccactagtttttatatgggagtgttttagcaagctac 41146265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 229
Target Start/End: Complemental strand, 43236395 - 43236353
Alignment:
Q  187 tttgctagaacacacccacaagttttcatgtgagagtgtttta 229  Q
    ||||||||||||||||||| |||||| ||||| ||||||||||    
T  43236395 tttgctagaacacacccactagtttttatgtgggagtgtttta 43236353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 45818743 - 45818797
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    ||||||||||||| |||||||| |||||| ||||  |||||||||| ||||||||    
T  45818743 ggatttgctagaatacacccactagtttttatgtcggagtgttttagcaagctac 45818797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 234
Target Start/End: Complemental strand, 47131153 - 47131103
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    ||||||| |||||||||||||| |||||| ||||| |||||||||| ||||    
T  47131153 ggatttgttagaacacacccactagtttttatgtgtgagtgttttagcaag 47131103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 2965421 - 2965372
Alignment:
Q  185 gatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    ||||||||||||||||||||| |||||| ||||  |||||||||| ||||    
T  2965421 gatttgctagaacacacccactagtttttatgtcggagtgttttagcaag 2965372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 185 - 238
Target Start/End: Original strand, 32155945 - 32155998
Alignment:
Q  185 gatttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    ||||||||||||||||||||  |||||| ||||| || ||||||| ||||||||    
T  32155945 gatttgctagaacacacccattagtttttatgtgtgaatgttttagcaagctac 32155998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 227
Target Start/End: Original strand, 452316 - 452359
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttt 227  Q
    |||||||||||||||||||||| |||||| ||||||||||||||    
T  452316 ggatttgctagaacacacccactagtttttatgtgagagtgttt 452359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 229
Target Start/End: Complemental strand, 452601 - 452559
Alignment:
Q  187 tttgctagaacacacccacaagttttcatgtgagagtgtttta 229  Q
    ||||||||||||||||||| |||||| ||||| ||||||||||    
T  452601 tttgctagaacacacccactagtttttatgtgggagtgtttta 452559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1259 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1259
Description:

Target: scaffold1259; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 226
Target Start/End: Complemental strand, 43 - 1
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgtt 226  Q
    |||||||||||||||||||||| |||||| ||||| |||||||    
T  43 ggatttgctagaacacacccactagtttttatgtgggagtgtt 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0778 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0778
Description:

Target: scaffold0778; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 234
Target Start/End: Original strand, 6220 - 6270
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    |||||||||||||||||||||| | |||| ||||| |||||||||| ||||    
T  6220 ggatttgctagaacacacccactaatttttatgtgggagtgttttagcaag 6270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0325 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 238
Target Start/End: Original strand, 6504 - 6554
Alignment:
Q  188 ttgctagaacacacccacaagttttcatgtgagagtgttttaacaagctac 238  Q
    |||||||||||||||||| |||||| |||||  ||||||||| ||||||||    
T  6504 ttgctagaacacacccactagtttttatgtggaagtgttttagcaagctac 6554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 234
Target Start/End: Complemental strand, 20855 - 20805
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    |||||||||||||||||||||| | |||| ||||| |||||||||| ||||    
T  20855 ggatttgctagaacacacccactaatttttatgtgggagtgttttagcaag 20805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 234
Target Start/End: Original strand, 26000 - 26050
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    |||||||||||||||||||||  | |||| ||||| |||||||||||||||    
T  26000 ggatttgctagaacacacccaataatttttatgtgggagtgttttaacaag 26050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 234
Target Start/End: Complemental strand, 14979 - 14929
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    |||||||||||||||||||||| | |||| | ||| |||||||||||||||    
T  14979 ggatttgctagaacacacccactactttttacgtgggagtgttttaacaag 14929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 229
Target Start/End: Original strand, 57857 - 57899
Alignment:
Q  187 tttgctagaacacacccacaagttttcatgtgagagtgtttta 229  Q
    ||||||||||||||||||| |||||| ||||| ||||||||||    
T  57857 tttgctagaacacacccactagtttttatgtgggagtgtttta 57899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 234
Target Start/End: Complemental strand, 58144 - 58094
Alignment:
Q  184 ggatttgctagaacacacccacaagttttcatgtgagagtgttttaacaag 234  Q
    |||||||||||||||||||||| | |||| ||||| |||||||||| ||||    
T  58144 ggatttgctagaacacacccactaatttttatgtgggagtgttttagcaag 58094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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