View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21097_low_37 (Length: 441)
Name: NF21097_low_37
Description: NF21097
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21097_low_37 |
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Alignment Details
Target: chr7 (Bit Score: 379; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 379; E-Value: 0
Query Start/End: Original strand, 20 - 431
Target Start/End: Original strand, 42580675 - 42581088
Alignment:
| Q |
20 |
aagaggacacatgaggctgtaaatgagttaggggccaaacatatttttgcgacagagtcacttatcaggtgtgtgttggattgttgattatcacagatat |
119 |
Q |
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| T |
42580675 |
aagaggacacatgaggctgtaaatgagttaggggccaaacatatttttgcgacagagtcacttatcaggtgtgtgttggattgttgattatcacagatat |
42580774 |
T |
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| Q |
120 |
attttttctgttatgcaatgtgttcagcatatgatgttagtttgggatatatggggatgcgggggaatgagttatatggcattagctttggtcaattgta |
219 |
Q |
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| T |
42580775 |
attttttttgttatgcaatgtgttcagcatatgatgttagtttgggatatatggggatgcgggggaatgagttatatggcattagctttggtcaattgta |
42580874 |
T |
|
| Q |
220 |
agctttagttattgtcgttatctcattaatcaatagggtttatgcaatgtgatatcaataactttggcacaggaacgcttgtgagagccatgtgcagcat |
319 |
Q |
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|||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| |
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| T |
42580875 |
agctttagttattgtcattatctcattaatcaataggttttatgcaatgtgatatcaataactttggtacaggaacgcttgtgagagtcatgtgcagcat |
42580974 |
T |
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| Q |
320 |
gttgcagaggtcaattctgtacgagcagcagccgaggaagatgtggcaatgaacactgatgattttctgcagcagttcgatggtgagtat--tggtcttg |
417 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
42580975 |
gttgcagaggtcaattctgtacgagcagcagccgaggaagatgtggcaaagaacactgatgattttctgcagcagttcgatggtgagtattgtggtcttg |
42581074 |
T |
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| Q |
418 |
atattggtcctatg |
431 |
Q |
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| T |
42581075 |
atattggtcctatg |
42581088 |
T |
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