View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21097_low_49 (Length: 378)
Name: NF21097_low_49
Description: NF21097
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21097_low_49 |
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Alignment Details
Target: chr8 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 71 - 368
Target Start/End: Complemental strand, 41085490 - 41085193
Alignment:
| Q |
71 |
atatttttctgttcaaactagttagaaagtgttattgattttctgttttatgagggtgaaggtagaaagtgttttatgatgctatagacttttagccttt |
170 |
Q |
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| T |
41085490 |
atatttttctgttcaaactagttagaaagtgttattgattttctgttttatgagggtgaaggtagaaagtgttttatgatgctatagacttttagccttt |
41085391 |
T |
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| Q |
171 |
ttggttggatttctataattgatctcttttccaaaaagaatagatcttttcttcttttccttgtatgtgtgcggtgacattattaaggaacagccttttc |
270 |
Q |
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|||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
41085390 |
ttggttggatttctataattgatctcttttccaaaaagaagagatcttttctccttttccttgtatgtgtgcggtgacattattaaggaatagccttttc |
41085291 |
T |
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| Q |
271 |
attttcatgatatagtaaataaattcgttnnnnnnnttattaaacaatgttaggatttacctgttcttggtctttgggtcattttcaatgttcctatg |
368 |
Q |
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||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41085290 |
attttcatgatatagtaaataaattcgttaaaaaaattattaaacaatgttaggatttacctgttcttggtctttgggtcattttcaatgttcctatg |
41085193 |
T |
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