View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF21099_low_10 (Length: 244)
Name: NF21099_low_10
Description: NF21099
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21099_low_10 |
 | |
|
| [»] chr6 (35 HSPs) |
| |
|
| [»] scaffold0277 (2 HSPs) |
| |
|
| [»] scaffold0419 (1 HSPs) |
| | |
|
| [»] scaffold0349 (1 HSPs) |
| | |
|
| [»] scaffold0003 (1 HSPs) |
| | |
|
| [»] scaffold0019 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 209; Significance: 1e-114; HSPs: 35)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 16 - 244
Target Start/End: Original strand, 27603628 - 27603856
Alignment:
| Q |
16 |
caaaactaagggaagtcccgaagcatatgaaactgcacggtttaaaacttcttcataaattgaaggtactttgttattcttaaaagccatccacctcaac |
115 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27603628 |
caaaactaagggaagtcctgaagcatatgaaactgcacggtttaaaacgtcttcataaactgaaggtactttgttattcttaaaagccatccacctcaac |
27603727 |
T |
|
| Q |
116 |
aattcaagagcttctgtcctacacaacccttctaatgcatactttctttctatatcatgactggttagtaagtgtctgtctcgagtggtaatgatgaccc |
215 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27603728 |
aattcaagagcttctgtcctacacaacccttctaatgcatactttctttctatatcatgactggttagtaagtgtctgtctcgagtggtaatgatgaccc |
27603827 |
T |
|
| Q |
216 |
agcttccaaggccaaaccaatcaggttct |
244 |
Q |
| |
|
||||||||| |||||||||||||||||| |
|
|
| T |
27603828 |
tgcttccaagcccaaaccaatcaggttct |
27603856 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 17 - 241
Target Start/End: Complemental strand, 26803703 - 26803479
Alignment:
| Q |
17 |
aaaactaagggaagtcccgaagcatatgaaactgcacggtttaaaacttcttcataaattgaaggtactttgttattcttaaaagccatccacctcaaca |
116 |
Q |
| |
|
|||||||||||||| || |||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
26803703 |
aaaactaagggaagacctgaagcatatgaaactgcacgatttaaaatgtcttcataacttgaaggtactttgttatttttaaaagccatccacctcaaca |
26803604 |
T |
|
| Q |
117 |
attcaagagcttctgtcctacacaacccttctaatgcatactttctttctatatcatgactggttagtaagtgtctgtctcgagtggtaatgatgaccca |
216 |
Q |
| |
|
|||||||||||||||||| | ||||||| |||| |||||| |||||||||||||||||||||| ||||| ||| |||||||||||||||||||||||| |
|
|
| T |
26803603 |
attcaagagcttctgtcccatacaacccctctactgcatatgttctttctatatcatgactggtcagtaaatgtttgtctcgagtggtaatgatgaccct |
26803504 |
T |
|
| Q |
217 |
gcttccaaggccaaaccaatcaggt |
241 |
Q |
| |
|
||||||| ||||||||||||||||| |
|
|
| T |
26803503 |
gcttccatggccaaaccaatcaggt |
26803479 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 17 - 241
Target Start/End: Complemental strand, 28787495 - 28787271
Alignment:
| Q |
17 |
aaaactaagggaagtcccgaagcatatgaaactgcacggtttaaaacttcttcataaattgaaggtactttgttattcttaaaagccatccacctcaaca |
116 |
Q |
| |
|
|||||||||||||| ||||||||||| ||||||||||| |||||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
28787495 |
aaaactaagggaaggcccgaagcataagaaactgcacgatttaaaacgtcttcataacttgaaggtactttgttattcttaaaagccatccatctcaaca |
28787396 |
T |
|
| Q |
117 |
attcaagagcttctgtcctacacaacccttctaatgcatactttctttctatatcatgactggttagtaagtgtctgtctcgagtggtaatgatgaccca |
216 |
Q |
| |
|
| |||||||||||||||| | ||| ||||| | | ||| | |||||||| ||||||| ||||||||||| |||||||||| ||||||||||||| |
|
|
| T |
28787395 |
actcaagagcttctgtcccatacagccctttcacttcatgtgtactttctatcccatgacttcttagtaagtgtttgtctcgagtcgtaatgatgaccct |
28787296 |
T |
|
| Q |
217 |
gcttccaaggccaaaccaatcaggt |
241 |
Q |
| |
|
||||||| |||| |||||||||||| |
|
|
| T |
28787295 |
gcttccacggccgaaccaatcaggt |
28787271 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 17 - 241
Target Start/End: Complemental strand, 28793616 - 28793392
Alignment:
| Q |
17 |
aaaactaagggaagtcccgaagcatatgaaactgcacggtttaaaacttcttcataaattgaaggtactttgttattcttaaaagccatccacctcaaca |
116 |
Q |
| |
|
|||||||||||||| ||||||||||| ||||||||||| |||||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
28793616 |
aaaactaagggaaggcccgaagcatacgaaactgcacgatttaaaacgtcttcataacttgaaggtactttgttattcttaaaagccatccatctcaaca |
28793517 |
T |
|
| Q |
117 |
attcaagagcttctgtcctacacaacccttctaatgcatactttctttctatatcatgactggttagtaagtgtctgtctcgagtggtaatgatgaccca |
216 |
Q |
| |
|
| |||||||||||||||| | ||| ||||| | | ||| | |||||||| ||||||| ||||||||||| |||||||||| ||||||||||||| |
|
|
| T |
28793516 |
actcaagagcttctgtcccatacagccctttcacttcatgtgtactttctatcccatgacttcttagtaagtgtttgtctcgagtcgtaatgatgaccct |
28793417 |
T |
|
| Q |
217 |
gcttccaaggccaaaccaatcaggt |
241 |
Q |
| |
|
||||||| |||| |||||||||||| |
|
|
| T |
28793416 |
gcttccacggccgaaccaatcaggt |
28793392 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 17 - 238
Target Start/End: Complemental strand, 26647736 - 26647515
Alignment:
| Q |
17 |
aaaactaagggaagtcccgaagcatatgaaactgcacggtttaaaacttcttcataaattgaaggtactttgttattcttaaaagccatccacctcaaca |
116 |
Q |
| |
|
|||||||||||||| || ||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||| |||||||||||||||| |
|
|
| T |
26647736 |
aaaactaagggaaggcctgaagcatatgaaactgcacggtttaaaacgtcttcataacttggcggtactttgttattcttaaacgccatccacctcaaca |
26647637 |
T |
|
| Q |
117 |
attcaagagcttctgtcctacacaacccttctaatgcatactttctttctatatcatgactggttagtaagtgtctgtctcgagtggtaatgatgaccca |
216 |
Q |
| |
|
|||||||||||||||||| | | | |||| || |||||| |||||||||| |||||| ||||||||||||| | ||||| ||||| |||||||| | |
|
|
| T |
26647636 |
attcaagagcttctgtcccatatagccctcttactgcatatgttctttctatcccatgacaggttagtaagtgtttatctcgggtggtgatgatgactct |
26647537 |
T |
|
| Q |
217 |
gcttccaaggccaaaccaatca |
238 |
Q |
| |
|
||||||| | || ||||||||| |
|
|
| T |
26647536 |
gcttccaggaccgaaccaatca |
26647515 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 17 - 238
Target Start/End: Complemental strand, 26753704 - 26753483
Alignment:
| Q |
17 |
aaaactaagggaagtcccgaagcatatgaaactgcacggtttaaaacttcttcataaattgaaggtactttgttattcttaaaagccatccacctcaaca |
116 |
Q |
| |
|
|||||||||||||| || ||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||| |||||||||||||||| |
|
|
| T |
26753704 |
aaaactaagggaaggcctgaagcatatgaaactgcacggtttaaaacgtcttcataacttggcggtactttgttattcttaaacgccatccacctcaaca |
26753605 |
T |
|
| Q |
117 |
attcaagagcttctgtcctacacaacccttctaatgcatactttctttctatatcatgactggttagtaagtgtctgtctcgagtggtaatgatgaccca |
216 |
Q |
| |
|
|||||||||||||||||| | | | |||| || |||||| |||||||||| |||||| ||||||||||||| | ||||| ||||| |||||||| | |
|
|
| T |
26753604 |
attcaagagcttctgtcccatatagccctcttactgcatatgttctttctatcccatgacaggttagtaagtgtttatctcgggtggtgatgatgactct |
26753505 |
T |
|
| Q |
217 |
gcttccaaggccaaaccaatca |
238 |
Q |
| |
|
||||||| | || ||||||||| |
|
|
| T |
26753504 |
gcttccaggaccgaaccaatca |
26753483 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 20 - 213
Target Start/End: Complemental strand, 26825073 - 26824880
Alignment:
| Q |
20 |
actaagggaagtcccgaagcatatgaaactgcacggtttaaaacttcttcataaattgaaggtactttgttattcttaaaagccatccacctcaacaatt |
119 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||| | ||||||| |||| |||||||||||||| ||||||||||||||||| ||||||| |
|
|
| T |
26825073 |
actaagggaaggcccgaagcatatgaaactgcacggtttaaaatgtgttcataacttgacggtactttgttatttttaaaagccatccaccttaacaatt |
26824974 |
T |
|
| Q |
120 |
caagagcttctgtcctacacaacccttctaatgcatactttctttctatatcatgactggttagtaagtgtctgtctcgagtggtaatgatgac |
213 |
Q |
| |
|
||||||||||||||| | |||||||||||| | ||||| || |||||| |||||| |||| ||||| ||| |||||||||| ||||||||||| |
|
|
| T |
26824973 |
caagagcttctgtcccatacaacccttctacttcatacattaattctatctcatgattggtaagtaattgtttgtctcgagttgtaatgatgac |
26824880 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 19 - 241
Target Start/End: Original strand, 27717426 - 27717648
Alignment:
| Q |
19 |
aactaagggaagtcccgaagcatatgaaactgcacggtttaaaacttcttcataaattgaaggtactttgttattcttaaaagccatccacctcaacaat |
118 |
Q |
| |
|
|||||| ||||| || |||||||||| ||||||||||||||||| ||||| ||| |||||| || |||| | | |||||||||||||||||||||||| |
|
|
| T |
27717426 |
aactaacggaaggccagaagcatatgcaactgcacggtttaaaatctcttcgtaacctgaaggaacattgtcacttttaaaagccatccacctcaacaat |
27717525 |
T |
|
| Q |
119 |
tcaagagcttctgtcctacacaacccttctaatgcatactttctttctatatcatgactggttagtaagtgtctgtctcgagtggtaatgatgacccagc |
218 |
Q |
| |
|
|||||||||||||||| | |||||||||||| | ||| | | |||| ||| |||||| ||||||||||||| |||||||||||||||||||||| || |
|
|
| T |
27717526 |
tcaagagcttctgtcccatacaacccttctacttcatgcatactttttatcccatgacaggttagtaagtgtttgtctcgagtggtaatgatgactttgc |
27717625 |
T |
|
| Q |
219 |
ttccaaggccaaaccaatcaggt |
241 |
Q |
| |
|
||||| |||| |||||||||||| |
|
|
| T |
27717626 |
ttccacggccgaaccaatcaggt |
27717648 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 17 - 238
Target Start/End: Original strand, 27337020 - 27337241
Alignment:
| Q |
17 |
aaaactaagggaagtcccgaagcatatgaaactgcacggtttaaaacttcttcataaattgaaggtactttgttattcttaaaagccatccacctcaaca |
116 |
Q |
| |
|
||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||| |||||||||||| |
|
|
| T |
27337020 |
aaaactaagggaatgcccgaaccatatgaaactgcacggtttaaaacatcttcataacttggcggtactttgttattcttaaaagccgtccacctcaaca |
27337119 |
T |
|
| Q |
117 |
attcaagagcttctgtcctacacaacccttctaatgcatactttctttctatatcatgactggttagtaagtgtctgtctcgagtggtaatgatgaccca |
216 |
Q |
| |
|
||||||||||||| ||| | | | |||| || |||||| |||||||||| |||||| ||||||||||||| | ||||| ||||| |||||||| | |
|
|
| T |
27337120 |
attcaagagcttccttcccatatagccctcttactgcatatgttctttctatcccatgacaggttagtaagtgtttatctcgggtggtgatgatgactct |
27337219 |
T |
|
| Q |
217 |
gcttccaaggccaaaccaatca |
238 |
Q |
| |
|
||||||| | || ||||||||| |
|
|
| T |
27337220 |
gcttccaggaccgaaccaatca |
27337241 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 17 - 238
Target Start/End: Original strand, 27397760 - 27397981
Alignment:
| Q |
17 |
aaaactaagggaagtcccgaagcatatgaaactgcacggtttaaaacttcttcataaattgaaggtactttgttattcttaaaagccatccacctcaaca |
116 |
Q |
| |
|
||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||| |||||||||||| |
|
|
| T |
27397760 |
aaaactaagggaatgcccgaaccatatgaaactgcacggtttaaaacatcttcataacttggcggtactttgttattcttaaaagccgtccacctcaaca |
27397859 |
T |
|
| Q |
117 |
attcaagagcttctgtcctacacaacccttctaatgcatactttctttctatatcatgactggttagtaagtgtctgtctcgagtggtaatgatgaccca |
216 |
Q |
| |
|
||||||||||||| ||| | | | |||| || |||||| |||||||||| |||||| ||||||||||||| | ||||| ||||| |||||||| | |
|
|
| T |
27397860 |
attcaagagcttccttcccatatagccctcttactgcatatgttctttctatcccatgacaggttagtaagtgtttatctcgggtggtgatgatgactct |
27397959 |
T |
|
| Q |
217 |
gcttccaaggccaaaccaatca |
238 |
Q |
| |
|
||||||| | || ||||||||| |
|
|
| T |
27397960 |
gcttccaggaccgaaccaatca |
27397981 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 19 - 238
Target Start/End: Complemental strand, 31285814 - 31285595
Alignment:
| Q |
19 |
aactaagggaagtcccgaagcatatgaaactgcacggtttaaaacttcttcataaattgaaggtactttgttattcttaaaagccatccacctcaacaat |
118 |
Q |
| |
|
|||||| ||||| || |||| ||||| ||||||||||||||||| ||||| ||| |||||| ||||||| | | ||||||||||||||||| |||||| |
|
|
| T |
31285814 |
aactaatggaaggccagaagaatatgcaactgcacggtttaaaatgtcttcgtaacctgaaggaactttgtcacttttaaaagccatccaccttaacaat |
31285715 |
T |
|
| Q |
119 |
tcaagagcttctgtcctacacaacccttctaatgcatactttctttctatatcatgactggttagtaagtgtctgtctcgagtggtaatgatgacccagc |
218 |
Q |
| |
|
||||||||||| |||| | ||||||||||| ||||| | |||| ||| ||||||| ||||||||||| |||||||||||||||||||||| | || |
|
|
| T |
31285714 |
tcaagagcttcagtcccattcaacccttctactgcatgtgtactttttatcccatgactacttagtaagtgtttgtctcgagtggtaatgatgactctgc |
31285615 |
T |
|
| Q |
219 |
ttccaaggccaaaccaatca |
238 |
Q |
| |
|
||||| |||| ||||||||| |
|
|
| T |
31285614 |
ttccacggccgaaccaatca |
31285595 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 17 - 238
Target Start/End: Complemental strand, 26624528 - 26624307
Alignment:
| Q |
17 |
aaaactaagggaagtcccgaagcatatgaaactgcacggtttaaaacttcttcataaattgaaggtactttgttattcttaaaagccatccacctcaaca |
116 |
Q |
| |
|
|||||||| ||||| || |||||||||| ||||||||||||||||| ||||||||| |||||| ||||||| | | |||||||||||||||||||||| |
|
|
| T |
26624528 |
aaaactaacggaaggccagaagcatatgcaactgcacggtttaaaatgtcttcataacctgaaggaactttgtcacttttaaaagccatccacctcaaca |
26624429 |
T |
|
| Q |
117 |
attcaagagcttctgtcctacacaacccttctaatgcatactttctttctatatcatgactggttagtaagtgtctgtctcgagtggtaatgatgaccca |
216 |
Q |
| |
|
||||| || | ||||||| | |||||||||||| ||||| | |||| ||| ||||| || |||||| |||| ||| |||||||||||| ||||||| |
|
|
| T |
26624428 |
attcatgaccgtctgtcccatacaacccttctactgcatgtgtgctttttatcccatgagtgcttagtaggtgtttgtttcgagtggtaattatgaccct |
26624329 |
T |
|
| Q |
217 |
gcttccaaggccaaaccaatca |
238 |
Q |
| |
|
||||||| | || ||||||||| |
|
|
| T |
26624328 |
gcttccacgtccgaaccaatca |
26624307 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 17 - 238
Target Start/End: Complemental strand, 26730505 - 26730284
Alignment:
| Q |
17 |
aaaactaagggaagtcccgaagcatatgaaactgcacggtttaaaacttcttcataaattgaaggtactttgttattcttaaaagccatccacctcaaca |
116 |
Q |
| |
|
|||||||| ||||| || |||||||||| ||||||||||||||||| ||||||||| |||||| ||||||| | | |||||||||||||||||||||| |
|
|
| T |
26730505 |
aaaactaacggaaggccagaagcatatgcaactgcacggtttaaaatgtcttcataacctgaaggaactttgtcacttttaaaagccatccacctcaaca |
26730406 |
T |
|
| Q |
117 |
attcaagagcttctgtcctacacaacccttctaatgcatactttctttctatatcatgactggttagtaagtgtctgtctcgagtggtaatgatgaccca |
216 |
Q |
| |
|
||||| || | ||||||| | |||||||||||| ||||| | |||| ||| ||||| || |||||| |||| ||| |||||||||||| ||||||| |
|
|
| T |
26730405 |
attcatgaccgtctgtcccatacaacccttctactgcatgtgtgctttttatcccatgagtgcttagtaggtgtttgtttcgagtggtaattatgaccct |
26730306 |
T |
|
| Q |
217 |
gcttccaaggccaaaccaatca |
238 |
Q |
| |
|
||||||| | || ||||||||| |
|
|
| T |
26730305 |
gcttccacgtccgaaccaatca |
26730284 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 17 - 223
Target Start/End: Complemental strand, 27680207 - 27680001
Alignment:
| Q |
17 |
aaaactaagggaagtcccgaagcatatgaaactgcacggtttaaaacttcttcataaattgaaggtactttgttattcttaaaagccatccacctcaaca |
116 |
Q |
| |
|
|||||||| ||||| || ||||||||| ||||||||||||||||| ||||| ||| |||||| ||||| | | | |||||||||||||||||||||| |
|
|
| T |
27680207 |
aaaactaacggaaggccaaaagcatatgcaactgcacggtttaaaatgtcttcgtaacctgaaggaactttatcacttttaaaagccatccacctcaaca |
27680108 |
T |
|
| Q |
117 |
attcaagagcttctgtcctacacaacccttctaatgcatactttctttctatatcatgactggttagtaagtgtctgtctcgagtggtaatgatgaccca |
216 |
Q |
| |
|
||||||||||||||||| | ||||||||||| ||||| | |||||||| |||||||| ||||||||| | ||| |||||||||||||||||| | |
|
|
| T |
27680107 |
attcaagagcttctgtctcattcaacccttctactgcatgtgtactttctatgccatgactgcttagtaagtctttgtttcgagtggtaatgatgactct |
27680008 |
T |
|
| Q |
217 |
gcttcca |
223 |
Q |
| |
|
||||||| |
|
|
| T |
27680007 |
gcttcca |
27680001 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 17 - 238
Target Start/End: Original strand, 27705179 - 27705400
Alignment:
| Q |
17 |
aaaactaagggaagtcccgaagcatatgaaactgcacggtttaaaacttcttcataaattgaaggtactttgttattcttaaaagccatccacctcaaca |
116 |
Q |
| |
|
|||||||| ||||| || |||||||||| ||||||||||||||||| ||||||||| |||||| || |||| ||| |||||||||||||||||||||| |
|
|
| T |
27705179 |
aaaactaacggaaggccagaagcatatgcaactgcacggtttaaaatgtcttcataacctgaaggaacgttgtcatttttaaaagccatccacctcaaca |
27705278 |
T |
|
| Q |
117 |
attcaagagcttctgtcctacacaacccttctaatgcatactttctttctatatcatgactggttagtaagtgtctgtctcgagtggtaatgatgaccca |
216 |
Q |
| |
|
|||||||||| ||| ||| | ||||||||||| || ||| || ||||||| |||| || |||||||||| | | ||||||||| ||||| || | |
|
|
| T |
27705279 |
attcaagagcatctatcccattcaacccttctactggatatgttttttctatcctatgagaggctagtaagtgtttatttcgagtggtgatgataactct |
27705378 |
T |
|
| Q |
217 |
gcttccaaggccaaaccaatca |
238 |
Q |
| |
|
||||||| |||||||||||||| |
|
|
| T |
27705379 |
gcttccagggccaaaccaatca |
27705400 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 19 - 241
Target Start/End: Original strand, 27610047 - 27610269
Alignment:
| Q |
19 |
aactaagggaagtcccgaagcatatgaaactgcacggtttaaaacttcttcataaattgaaggtactttgttattcttaaaagccatccacctcaacaat |
118 |
Q |
| |
|
|||||| ||||| || |||||||||| ||| ||||||||||||| ||||| ||| |||||| || |||| | | |||||||||||||||||||||||| |
|
|
| T |
27610047 |
aactaacggaaggccagaagcatatgcaacagcacggtttaaaatctcttcgtaacctgaaggaacattgtcacttttaaaagccatccacctcaacaat |
27610146 |
T |
|
| Q |
119 |
tcaagagcttctgtcctacacaacccttctaatgcatactttctttctatatcatgactggttagtaagtgtctgtctcgagtggtaatgatgacccagc |
218 |
Q |
| |
|
|||||||||||||||| | ||| |||||| | | || | | |||| ||| |||||| |||||| |||||| |||||||||||| ||||||||| || |
|
|
| T |
27610147 |
tcaagagcttctgtcccatacagcccttccactttatgcatactttttatcccatgacaggttagcaagtgtttgtctcgagtggcaatgatgactttgc |
27610246 |
T |
|
| Q |
219 |
ttccaaggccaaaccaatcaggt |
241 |
Q |
| |
|
||||| |||| |||||||||||| |
|
|
| T |
27610247 |
ttccacggccgaaccaatcaggt |
27610269 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 21 - 238
Target Start/End: Original strand, 27591950 - 27592167
Alignment:
| Q |
21 |
ctaagggaagtcccgaagcatatgaaactgcacggtttaaaacttcttcataaattgaaggtactttgttattcttaaaagccatccacctcaacaattc |
120 |
Q |
| |
|
|||| ||||| || ||||||||| ||||||||| ||||||| ||||||||| ||||||| ||||| | ||| ||||||||| |||||||||||||||| |
|
|
| T |
27591950 |
ctaatggaaggccagaagcatatacaactgcacgctttaaaatgtcttcataacttgaaggaactttctcatttttaaaagccttccacctcaacaattc |
27592049 |
T |
|
| Q |
121 |
aagagcttctgtcctacacaacccttctaatgcatactttctttctatatcatgactggttagtaagtgtctgtctcgagtggtaatgatgacccagctt |
220 |
Q |
| |
|
|||||||||||||| | |||| |||||| |||||| || ||||||| |||||| | |||||||||| | ||||| ||||| |||||||| | |||| |
|
|
| T |
27592050 |
aagagcttctgtcccattcaactcttctactgcatatgttttttctatcccatgacagtctagtaagtgtttatctcgggtggtgatgatgactctgctt |
27592149 |
T |
|
| Q |
221 |
ccaaggccaaaccaatca |
238 |
Q |
| |
|
||| | || ||||||||| |
|
|
| T |
27592150 |
ccaggaccgaaccaatca |
27592167 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 26 - 238
Target Start/End: Original strand, 27426546 - 27426758
Alignment:
| Q |
26 |
ggaagtcccgaagcatatgaaactgcacggtttaaaacttcttcataaattgaaggtactttgttattcttaaaagccatccacctcaacaattcaagag |
125 |
Q |
| |
|
||||| || |||||||| | |||| |||| || |||| | ||||||| ||||||| ||||||| ||| ||||||||||||||||||||||||||||||| |
|
|
| T |
27426546 |
ggaaggccagaagcataagcaactacacgattcaaaatcttttcataacttgaaggaactttgtcatttttaaaagccatccacctcaacaattcaagag |
27426645 |
T |
|
| Q |
126 |
cttctgtcctacacaacccttctaatgcatactttctttctatatcatgactggttagtaagtgtctgtctcgagtggtaatgatgacccagcttccaag |
225 |
Q |
| |
|
|||||||| | |||||||| || |||||| || ||||||| ||||||| || |||||||||| | ||||| ||||| |||||||| | ||||||| | |
|
|
| T |
27426646 |
cttctgtcacattcaacccttttactgcatatgttttttctatctcatgacaggctagtaagtgtttatctcgggtggtgatgatgactcggcttccagg |
27426745 |
T |
|
| Q |
226 |
gccaaaccaatca |
238 |
Q |
| |
|
|| ||||||||| |
|
|
| T |
27426746 |
accgaaccaatca |
27426758 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 21 - 237
Target Start/End: Original strand, 27676549 - 27676765
Alignment:
| Q |
21 |
ctaagggaagtcccgaagcatatgaaactgcacggtttaaaacttcttcataaattgaaggtactttgttattcttaaaagccatccacctcaacaattc |
120 |
Q |
| |
|
|||| ||||| || ||||||||| ||||||||| ||||||| ||||||||| ||||||| ||||| | ||| ||||||||| |||||||||||||||| |
|
|
| T |
27676549 |
ctaatggaaggccagaagcatatacaactgcacgctttaaaatgtcttcataacttgaaggaactttctcatttttaaaagccttccacctcaacaattc |
27676648 |
T |
|
| Q |
121 |
aagagcttctgtcctacacaacccttctaatgcatactttctttctatatcatgactggttagtaagtgtctgtctcgagtggtaatgatgacccagctt |
220 |
Q |
| |
|
||||||||||||| | |||| |||||| |||||| || ||||||| |||||| | |||||||||| | ||||| ||||| |||||||| | |||| |
|
|
| T |
27676649 |
aagagcttctgtctcattcaactcttctactgcatatgttttttctatcccatgacagtctagtaagtgtttatctcgggtggtgatgatgactctgctt |
27676748 |
T |
|
| Q |
221 |
ccaaggccaaaccaatc |
237 |
Q |
| |
|
||| | ||||||||||| |
|
|
| T |
27676749 |
ccaggaccaaaccaatc |
27676765 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 65 - 238
Target Start/End: Original strand, 25492292 - 25492465
Alignment:
| Q |
65 |
tcttcataaattgaaggtactttgttattcttaaaagccatccacctcaacaattcaagagcttctgtcctacacaacccttctaatgcatactttcttt |
164 |
Q |
| |
|
||||||||||||||||| ||| ||| ||| ||||||||||||||| | | |||||||||||||||| || | |||| |||||| ||||| | | |||| |
|
|
| T |
25492292 |
tcttcataaattgaaggaactctgtcatttttaaaagccatccacataagcaattcaagagcttcttccccatgcaactcttctactgcatgcatacttt |
25492391 |
T |
|
| Q |
165 |
ctatatcatgactggttagtaagtgtctgtctcgagtggtaatgatgacccagcttccaaggccaaaccaatca |
238 |
Q |
| |
|
|||| ||||||||||||||| |||| ||||||||||||||||||| || | ||||||| | || ||||||||| |
|
|
| T |
25492392 |
ctatcccatgactggttagtatgtgtttgtctcgagtggtaatgataactccgcttccacgaccgaaccaatca |
25492465 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 19 - 237
Target Start/End: Original strand, 27697513 - 27697731
Alignment:
| Q |
19 |
aactaagggaagtcccgaagcatatgaaactgcacggtttaaaacttcttcataaattgaaggtactttgttattcttaaaagccatccacctcaacaat |
118 |
Q |
| |
|
|||||| ||||| || ||| |||||||||||||||| |||||| |||| || |||| || || |||| | | |||||||||||||||||||||||| |
|
|
| T |
27697513 |
aactaacggaaggccagaaacatatgaaactgcacgacttaaaatctctttgtaccttgatggaacattgtcacttttaaaagccatccacctcaacaat |
27697612 |
T |
|
| Q |
119 |
tcaagagcttctgtcctacacaacccttctaatgcatactttctttctatatcatgactggt-tagtaagtgtctgtctcgagtggtaatgatgacccag |
217 |
Q |
| |
|
|||||||||||||||| | |||||||| || ||||||| || ||||||| ||||| |||| |||||||||| | ||||| ||||| |||||||| | | |
|
|
| T |
27697613 |
tcaagagcttctgtcccattcaacccttttactgcatacgttttttctatcccatga-tggtctagtaagtgtttatctcgggtggtgatgatgactctg |
27697711 |
T |
|
| Q |
218 |
cttccaaggccaaaccaatc |
237 |
Q |
| |
|
|||||| | ||||||||||| |
|
|
| T |
27697712 |
cttccaggaccaaaccaatc |
27697731 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 21 - 238
Target Start/End: Complemental strand, 26144121 - 26143904
Alignment:
| Q |
21 |
ctaagggaagtcccgaagcatatgaaactgcacggtttaaaacttcttcataaattgaaggtactttgttattcttaaaagccatccacctcaacaattc |
120 |
Q |
| |
|
||||||| || || || ||||| | |||| |||||||||||| |||||||||| ||||||| ||||||| ||| ||||||||||| | |||||||||||| |
|
|
| T |
26144121 |
ctaagggcaggccagatgcataagtaactacacggtttaaaatttcttcataacttgaaggaactttgtcatttttaaaagccattcgcctcaacaattc |
26144022 |
T |
|
| Q |
121 |
aagagcttctgtcctacacaacccttctaatgcatactttctttctatatcatgactggttagtaagtgtctgtctcgagtggtaatgatgacccagctt |
220 |
Q |
| |
|
||||||||||||| | ||| |||||| ||||| | ||| || |||||| || |||||||||| | || ||||||||||||||||||| |||| |
|
|
| T |
26144021 |
aagagcttctgtctcattcaattcttctactgcatgtgtacttgtaatcccatgacaggctagtaagtgtttatcacgagtggtaatgatgaccctgctt |
26143922 |
T |
|
| Q |
221 |
ccaaggccaaaccaatca |
238 |
Q |
| |
|
||| | || ||||||||| |
|
|
| T |
26143921 |
ccatgaccgaaccaatca |
26143904 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 19 - 223
Target Start/End: Complemental strand, 26657217 - 26657016
Alignment:
| Q |
19 |
aactaagggaagtcccgaagcatatgaaactgcacggtttaaaacttcttcataaattgaaggtactttgttattcttaaaagccatccacctcaacaat |
118 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||| |||||| |||||||||| |||||| || |||| || ||||||||||||| ||||||||| |
|
|
| T |
26657217 |
aactaagggaagtcctgaagcatatgaaactgcacggcttaaaatttcttcataacctgaaggaacattgt--ctc-taaaagccatccatctcaacaat |
26657121 |
T |
|
| Q |
119 |
tcaagagcttctgtcctacacaacccttctaatgcatactttctttctatatcatgactggttagtaagtgtctgtctcgagtggtaatgatgacccagc |
218 |
Q |
| |
|
||||| |||||||||| | | | ||||| || ||||| || ||||||| | |||| | |||| |||||| | |||| ||||||||||||||| | || |
|
|
| T |
26657120 |
tcaagtgcttctgtcccatatagcccttttacggcatatgttatttctatcccgtgacagtttagcaagtgtttatctctagtggtaatgatgactctgc |
26657021 |
T |
|
| Q |
219 |
ttcca |
223 |
Q |
| |
|
||||| |
|
|
| T |
26657020 |
ttcca |
26657016 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 19 - 223
Target Start/End: Complemental strand, 26763188 - 26762987
Alignment:
| Q |
19 |
aactaagggaagtcccgaagcatatgaaactgcacggtttaaaacttcttcataaattgaaggtactttgttattcttaaaagccatccacctcaacaat |
118 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||| |||||| |||||||||| |||||| || |||| || ||||||||||||| ||||||||| |
|
|
| T |
26763188 |
aactaagggaagtcctgaagcatatgaaactgcacggcttaaaatttcttcataacctgaaggaacattgt--ctc-taaaagccatccatctcaacaat |
26763092 |
T |
|
| Q |
119 |
tcaagagcttctgtcctacacaacccttctaatgcatactttctttctatatcatgactggttagtaagtgtctgtctcgagtggtaatgatgacccagc |
218 |
Q |
| |
|
||||| |||||||||| | | | ||||| || ||||| || ||||||| | |||| | |||| |||||| | |||| ||||||||||||||| | || |
|
|
| T |
26763091 |
tcaagtgcttctgtcccatatagcccttttacggcatatgttatttctatcccgtgacagtttagcaagtgtttatctctagtggtaatgatgactctgc |
26762992 |
T |
|
| Q |
219 |
ttcca |
223 |
Q |
| |
|
||||| |
|
|
| T |
26762991 |
ttcca |
26762987 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 19 - 238
Target Start/End: Complemental strand, 26885322 - 26885106
Alignment:
| Q |
19 |
aactaagggaagtcccgaagcatatgaaactgcacggtttaaaacttcttcataaattgaaggtactttgttattcttaaaagccatccacctcaacaat |
118 |
Q |
| |
|
|||||| ||||| ||||||||||||||||||||||||||||||| ||||||||| | |||| |||||| | ||||| |||| ||||||||||||| |
|
|
| T |
26885322 |
aactaaaggaaggcccgaagcatatgaaactgcacggtttaaaatctcttcataacctaaaggaactttg---tctttaaaggccagccacctcaacaat |
26885226 |
T |
|
| Q |
119 |
tcaagagcttctgtcctacacaacccttctaatgcatactttctttctatatcatgactggttagtaagtgtctgtctcgagtggtaatgatgacccagc |
218 |
Q |
| |
|
|||| ||||||| ||| | | | |||||||| | |||| |||| |||| ||| | |||||||||||| | || ||||||||||||||||||| || |
|
|
| T |
26885225 |
tcaaaagcttctttcccatatatcccttctacttcatatgttctatctaccctatggcacgttagtaagtgtttatcacgagtggtaatgatgaccctgc |
26885126 |
T |
|
| Q |
219 |
ttccaaggccaaaccaatca |
238 |
Q |
| |
|
||||| | |||||||||||| |
|
|
| T |
26885125 |
ttccacgaccaaaccaatca |
26885106 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 19 - 238
Target Start/End: Complemental strand, 26862835 - 26862616
Alignment:
| Q |
19 |
aactaagggaagtcccgaagcatatgaaactgcacggtttaaaacttcttcataaattgaaggtactttgttattcttaaaagccatccacctcaacaat |
118 |
Q |
| |
|
|||||| ||||| || |||||||||| |||||||||||||||||| || | |||| | ||||| |||| ||| |||||||||||||||||||||||| |
|
|
| T |
26862835 |
aactaacggaaggccggaagcatatgcaactgcacggtttaaaacatcgttataactcgaaggaacttcaccatttttaaaagccatccacctcaacaat |
26862736 |
T |
|
| Q |
119 |
tcaagagcttctgtcctacacaacccttctaatgcatactttctttctatatcatgactggttagtaagtgtctgtctcgagtggtaatgatgacccagc |
218 |
Q |
| |
|
|||| |||||||||| | | ||| | || ||||| |||||||||| |||| | |||||||||||| | |||||||||||||||||||| | | |
|
|
| T |
26862735 |
tcaaaagcttctgtctcatgtagcccgtttaccgcatatgttctttctatcccatggcatgttagtaagtgtttatctcgagtggtaatgatgactctac |
26862636 |
T |
|
| Q |
219 |
ttccaaggccaaaccaatca |
238 |
Q |
| |
|
||||| | |||||||||||| |
|
|
| T |
26862635 |
ttccatgaccaaaccaatca |
26862616 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 238
Target Start/End: Complemental strand, 25580975 - 25580758
Alignment:
| Q |
21 |
ctaagggaagtcccgaagcatatgaaactgcacggtttaaaacttcttcataaattgaaggtactttgttattcttaaaagccatccacctcaacaattc |
120 |
Q |
| |
|
||||||| || || || ||||| | |||| |||||||||||| ||||||||||||||||| ||||||| ||| ||||||||||| | |||||||||||| |
|
|
| T |
25580975 |
ctaagggcagcccagatgcataagtaactacacggtttaaaatctcttcataaattgaaggaactttgtcatttttaaaagccattcgcctcaacaattc |
25580876 |
T |
|
| Q |
121 |
aagagcttctgtcctacacaacccttctaatgcatactttctttctatatcatgactggttagtaagtgtctgtctcgagtggtaatgatgacccagctt |
220 |
Q |
| |
|
||||||||||||| | ||| |||||| ||||| | ||| || |||||| || |||||||||| | || ||||||||||||||||| | |||| |
|
|
| T |
25580875 |
aagagcttctgtctcattcaattcttctactgcatgtgtacttgtaatcccatgacaggctagtaagtgtttatcacgagtggtaatgatgacactgctt |
25580776 |
T |
|
| Q |
221 |
ccaaggccaaaccaatca |
238 |
Q |
| |
|
||| | || ||||||||| |
|
|
| T |
25580775 |
ccatgaccgaaccaatca |
25580758 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 21 - 238
Target Start/End: Complemental strand, 25484312 - 25484095
Alignment:
| Q |
21 |
ctaagggaagtcccgaagcatatgaaactgcacggtttaaaacttcttcataaattgaaggtactttgttattcttaaaagccatccacctcaacaattc |
120 |
Q |
| |
|
||||||| || || || ||||| | |||| |||||||||||| ||||||||| ||||||| ||||||| ||| ||||||||||| | |||||||||||| |
|
|
| T |
25484312 |
ctaagggcaggccagatgcataagtaactacacggtttaaaatctcttcataacttgaaggaactttgtcatttttaaaagccattcgcctcaacaattc |
25484213 |
T |
|
| Q |
121 |
aagagcttctgtcctacacaacccttctaatgcatactttctttctatatcatgactggttagtaagtgtctgtctcgagtggtaatgatgacccagctt |
220 |
Q |
| |
|
||||||||||||| | ||| |||||| ||||| | ||| || |||||| || |||||||||| | || ||||||||||||||||| | |||| |
|
|
| T |
25484212 |
aagagcttctgtctcattcaattcttctactgcatgtgtacttgtaatcccatgacaggctagtaagtgtttatcacgagtggtaatgatgactctgctt |
25484113 |
T |
|
| Q |
221 |
ccaaggccaaaccaatca |
238 |
Q |
| |
|
||| | || ||||||||| |
|
|
| T |
25484112 |
ccatgaccgaaccaatca |
25484095 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 161 - 241
Target Start/End: Complemental strand, 28782214 - 28782134
Alignment:
| Q |
161 |
ctttctatatcatgactggttagtaagtgtctgtctcgagtggtaatgatgacccagcttccaaggccaaaccaatcaggt |
241 |
Q |
| |
|
|||||||| ||||||| ||||||||||| |||||||||||||||||||||||| ||||||| |||| |||||||||||| |
|
|
| T |
28782214 |
ctttctatcccatgacttcttagtaagtgtttgtctcgagtggtaatgatgaccctgcttccacggccgaaccaatcaggt |
28782134 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 21 - 213
Target Start/End: Original strand, 27530233 - 27530422
Alignment:
| Q |
21 |
ctaagggaagtcccgaagcatatgaaactgcacggtttaaaacttcttcataaattgaaggtactttgttattcttaaaagccatccacctcaacaattc |
120 |
Q |
| |
|
|||| ||||| || |||||||| | || |||||||||||||| ||||||| | ||||||| || || || || | ||||||||||||||||||||||| |
|
|
| T |
27530233 |
ctaatggaaggccagaagcataagtaagtgcacggtttaaaatgtcttcatgacttgaaggaacatt-ttctt--tgaaagccatccacctcaacaattc |
27530329 |
T |
|
| Q |
121 |
aagagcttctgtcctacacaacccttctaatgcatactttctttctatatcatgactggttagtaagtgtctgtctcgagtggtaatgatgac |
213 |
Q |
| |
|
|||||||||||| | ||||||||||| ||||| | |||||||| ||||| | ||||||||||| ||| |||||| ||||||||||| |
|
|
| T |
27530330 |
gagagcttctgtcgcattcaacccttctactgcatgtgtactttctatcccatgaatctttagtaagtgtttgtttcgagtagtaatgatgac |
27530422 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 21 - 133
Target Start/End: Complemental strand, 25539796 - 25539684
Alignment:
| Q |
21 |
ctaagggaagtcccgaagcatatgaaactgcacggtttaaaacttcttcataaattgaaggtactttgttattcttaaaagccatccacctcaacaattc |
120 |
Q |
| |
|
||||||| || || || ||||| | |||| |||||||||||| ||||||||| | ||||| ||||||| ||| ||||| ||||| | |||||||||||| |
|
|
| T |
25539796 |
ctaagggtaggccagatgcataagtaactacacggtttaaaatctcttcataactcgaaggaactttgtcatttttaaacgccattcgcctcaacaattc |
25539697 |
T |
|
| Q |
121 |
aagagcttctgtc |
133 |
Q |
| |
|
||||||||||||| |
|
|
| T |
25539696 |
aagagcttctgtc |
25539684 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 155
Target Start/End: Complemental strand, 26057175 - 26057041
Alignment:
| Q |
21 |
ctaagggaagtcccgaagcatatgaaactgcacggtttaaaacttcttcataaattgaaggtactttgttattcttaaaagccatccacctcaacaattc |
120 |
Q |
| |
|
|||| ||||| || || ||||| | |||| |||||||||||| ||||||||| ||||||| ||||||| ||| |||||||| | | ||||| ||||| |
|
|
| T |
26057175 |
ctaacggaaggccagatgcataagtaactacacggtttaaaatatcttcataacttgaaggaactttgtcatttttaaaagcatttcggctcaataattc |
26057076 |
T |
|
| Q |
121 |
aagagcttctgtcctacacaacccttctaatgcat |
155 |
Q |
| |
|
||||||||||||| | ||||||||||| ||||| |
|
|
| T |
26057075 |
aagagcttctgtctcattcaacccttctactgcat |
26057041 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 155
Target Start/End: Complemental strand, 26077145 - 26077011
Alignment:
| Q |
21 |
ctaagggaagtcccgaagcatatgaaactgcacggtttaaaacttcttcataaattgaaggtactttgttattcttaaaagccatccacctcaacaattc |
120 |
Q |
| |
|
|||| ||||| || || ||||| | |||| |||||||||||| ||||||||| ||||||| ||||||| ||| |||||||| | | ||||| ||||| |
|
|
| T |
26077145 |
ctaacggaaggccagatgcataagtaactacacggtttaaaatatcttcataacttgaaggaactttgtcatttttaaaagcatttcggctcaataattc |
26077046 |
T |
|
| Q |
121 |
aagagcttctgtcctacacaacccttctaatgcat |
155 |
Q |
| |
|
||||||||||||| | ||||||||||| ||||| |
|
|
| T |
26077045 |
aagagcttctgtctcattcaacccttctactgcat |
26077011 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 21 - 155
Target Start/End: Complemental strand, 25512144 - 25512010
Alignment:
| Q |
21 |
ctaagggaagtcccgaagcatatgaaactgcacggtttaaaacttcttcataaattgaaggtactttgttattcttaaaagccatccacctcaacaattc |
120 |
Q |
| |
|
|||| ||||| || || ||||| | |||| |||||||||||| ||||||||| ||||||| ||||||| || ||||||||||| | ||||||||| |
|
|
| T |
25512144 |
ctaacggaaggccagatgcataagtaactacacggtttaaaatctcttcataacttgaaggaactttgtcatgtttaaaagccattcgcctcaacaaaat |
25512045 |
T |
|
| Q |
121 |
aagagcttctgtcctacacaacccttctaatgcat |
155 |
Q |
| |
|
|||||||||| || | ||||||||||| ||||| |
|
|
| T |
25512044 |
aagagcttctatctcattcaacccttctactgcat |
25512010 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 130
Target Start/End: Complemental strand, 28186585 - 28186538
Alignment:
| Q |
83 |
actttgttattcttaaaagccatccacctcaacaattcaagagcttct |
130 |
Q |
| |
|
||||||||||| || |||||| ||||| |||||||||||||||||||| |
|
|
| T |
28186585 |
actttgttattttttaaagccttccacgtcaacaattcaagagcttct |
28186538 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0277 (Bit Score: 136; Significance: 5e-71; HSPs: 2)
Name: scaffold0277
Description:
Target: scaffold0277; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 17 - 244
Target Start/End: Original strand, 3637 - 3864
Alignment:
| Q |
17 |
aaaactaagggaagtcccgaagcatatgaaactgcacggtttaaaacttcttcataaattgaaggtactttgttattcttaaaagccatccacctcaaca |
116 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
3637 |
aaaactaagggaaggcccgaagcatatgaaactgcacgatttaaaacgtcttcataacttgaaggtactttgttattcttaaaagccatccatctcaaca |
3736 |
T |
|
| Q |
117 |
attcaagagcttctgtcctacacaacccttctaatgcatactttctttctatatcatgactggttagtaagtgtctgtctcgagtggtaatgatgaccca |
216 |
Q |
| |
|
| |||||||||||||||| | ||| ||||| | | ||| | | |||||||| ||||||| |||| |||||| |||||||||||||||||||||||| |
|
|
| T |
3737 |
actcaagagcttctgtcccatacagccctttcacttcatgcgtactttctatcccatgacttcttagcaagtgtttgtctcgagtggtaatgatgaccct |
3836 |
T |
|
| Q |
217 |
gcttccaaggccaaaccaatcaggttct |
244 |
Q |
| |
|
|||||||||||||||||||||||||||| |
|
|
| T |
3837 |
gcttccaaggccaaaccaatcaggttct |
3864 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0277; HSP #2
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 17 - 241
Target Start/End: Original strand, 12600 - 12824
Alignment:
| Q |
17 |
aaaactaagggaagtcccgaagcatatgaaactgcacggtttaaaacttcttcataaattgaaggtactttgttattcttaaaagccatccacctcaaca |
116 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
12600 |
aaaactaagggaaggcccgaagcatatgaaactgcacgatttaaaacgtcttcataacttgaaggtactttgttattcttaaaagccatccatctcaaca |
12699 |
T |
|
| Q |
117 |
attcaagagcttctgtcctacacaacccttctaatgcatactttctttctatatcatgactggttagtaagtgtctgtctcgagtggtaatgatgaccca |
216 |
Q |
| |
|
| |||||||||||||| | | ||| ||||| | | ||| | | |||| ||| ||||||| ||||||||||| |||||||||||||||||||||||| |
|
|
| T |
12700 |
actcaagagcttctgttccatacagccctttcacttcatgcgtactttttatcccatgacttcttagtaagtgtttgtctcgagtggtaatgatgaccct |
12799 |
T |
|
| Q |
217 |
gcttccaaggccaaaccaatcaggt |
241 |
Q |
| |
|
||||||| |||| |||||||||||| |
|
|
| T |
12800 |
gcttccacggccgaaccaatcaggt |
12824 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 17 - 238
Target Start/End: Original strand, 29272763 - 29272984
Alignment:
| Q |
17 |
aaaactaagggaagtcccgaagcatatgaaactgcacggtttaaaacttcttcataaattgaaggtactttgttattcttaaaagccatccacctcaaca |
116 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29272763 |
aaaactaagggaaggcccgaagcatatgaaactgcacgatttaaaacgtcttcataaattgaaggtactttgttattcttaaaagccatccacctcaaca |
29272862 |
T |
|
| Q |
117 |
attcaagagcttctgtcctacacaacccttctaatgcatactttctttctatatcatgactggttagtaagtgtctgtctcgagtggtaatgatgaccca |
216 |
Q |
| |
|
|||||||||||| ||||| | ||| |||||||| | ||| | | |||| ||| |||||| ||||| |||||| |||||||||| ||||||||||| |
|
|
| T |
29272863 |
attcaagagcttttgtcccatacagcccttctacttcatgcatactttttatcccatgacaagttagcaagtgtttgtctcgagtagtaatgatgacttt |
29272962 |
T |
|
| Q |
217 |
gcttccaaggccaaaccaatca |
238 |
Q |
| |
|
||||||| |||| ||||||||| |
|
|
| T |
29272963 |
gcttccacggccgaaccaatca |
29272984 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0419 (Bit Score: 121; Significance: 4e-62; HSPs: 1)
Name: scaffold0419
Description:
Target: scaffold0419; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 17 - 241
Target Start/End: Complemental strand, 8744 - 8520
Alignment:
| Q |
17 |
aaaactaagggaagtcccgaagcatatgaaactgcacggtttaaaacttcttcataaattgaaggtactttgttattcttaaaagccatccacctcaaca |
116 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
8744 |
aaaactaagggaaggcccgaagcatatgaaactgcacgatttaaaacgtcttcataacttgaaggtactttgttattcttaaaagccatccatctcaaca |
8645 |
T |
|
| Q |
117 |
attcaagagcttctgtcctacacaacccttctaatgcatactttctttctatatcatgactggttagtaagtgtctgtctcgagtggtaatgatgaccca |
216 |
Q |
| |
|
| |||||||||||||| | | ||| ||||| | | ||| | | |||| ||| ||||||| ||||||||||| |||||||||||||||||||||||| |
|
|
| T |
8644 |
actcaagagcttctgttccatacagccctttcacttcatgcgtactttttatcccatgacttcttagtaagtgtttgtctcgagtggtaatgatgaccct |
8545 |
T |
|
| Q |
217 |
gcttccaaggccaaaccaatcaggt |
241 |
Q |
| |
|
||||||| |||| |||||||||||| |
|
|
| T |
8544 |
gcttccacggccgaaccaatcaggt |
8520 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 115; Significance: 2e-58; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 19 - 237
Target Start/End: Original strand, 28163303 - 28163521
Alignment:
| Q |
19 |
aactaagggaagtcccgaagcatatgaaactgcacggtttaaaacttcttcataaattgaaggtactttgttattcttaaaagccatccacctcaacaat |
118 |
Q |
| |
|
|||||||||||| || |||||||||||||||||||| |||||||| ||||||||| ||||||| ||||||||||| ||||||||||||||| |||||||| |
|
|
| T |
28163303 |
aactaagggaaggcctgaagcatatgaaactgcacgatttaaaacatcttcataacttgaaggaactttgttatttttaaaagccatccacgtcaacaat |
28163402 |
T |
|
| Q |
119 |
tcaagagcttctgtcctacacaacccttctaatgcatactttctttctatatcatgactggttagtaagtgtctgtctcgagtggtaatgatgacccagc |
218 |
Q |
| |
|
||||| ||||| |||| | |||||||||||| | || | | |||||||| |||||| ||||||||||||| |||||||||||||||||||||||| || |
|
|
| T |
28163403 |
tcaagcgcttccgtcccatacaacccttctaccgaatgcatactttctatcccatgacaggttagtaagtgtttgtctcgagtggtaatgatgaccctgc |
28163502 |
T |
|
| Q |
219 |
ttccaaggccaaaccaatc |
237 |
Q |
| |
|
||||| | || |||||||| |
|
|
| T |
28163503 |
ttccacgaccgaaccaatc |
28163521 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 19 - 238
Target Start/End: Original strand, 28126602 - 28126821
Alignment:
| Q |
19 |
aactaagggaagtcccgaagcatatgaaactgcacggtttaaaacttcttcataaattgaaggtactttgttattcttaaaagccatccacctcaacaat |
118 |
Q |
| |
|
|||||||||||| || ||||||||||||||||| ||||||||||| || |||||| ||||||| |||||||||| |||||||||||||||||||||||| |
|
|
| T |
28126602 |
aactaagggaaggcctgaagcatatgaaactgcccggtttaaaacatcatcataacttgaaggaactttgttatgtttaaaagccatccacctcaacaat |
28126701 |
T |
|
| Q |
119 |
tcaagagcttctgtcctacacaacccttctaatgcatactttctttctatatcatgactggttagtaagtgtctgtctcgagtggtaatgatgacccagc |
218 |
Q |
| |
|
||||| |||| ||| | ||||||||| || |||| | | |||||||| |||||| ||||||||||||| | |||||||||||||||||||| || |
|
|
| T |
28126702 |
tcaagtgcttttgttacatacaacccttttaccgcatgcgtactttctatcccatgacaggttagtaagtgtttctctcgagtggtaatgatgactttgc |
28126801 |
T |
|
| Q |
219 |
ttccaaggccaaaccaatca |
238 |
Q |
| |
|
||||| | || ||||||||| |
|
|
| T |
28126802 |
ttccacgaccgaaccaatca |
28126821 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 238
Target Start/End: Original strand, 267265 - 267486
Alignment:
| Q |
17 |
aaaactaagggaagtcccgaagcatatgaaactgcacggtttaaaacttcttcataaattgaaggtactttgttattcttaaaagccatccacctcaaca |
116 |
Q |
| |
|
|||||||| ||||| || |||||||| | ||||||||| |||||| || | |||||||| || ||| | ||| |||||||||||||| ||||||| |
|
|
| T |
267265 |
aaaactaacggaaggccagaagcataagcaactgcacgaattaaaatctcattgtaaattgatggaactggatcatttttaaaagccatccaactcaaca |
267364 |
T |
|
| Q |
117 |
attcaagagcttctgtcctacacaacccttctaatgcatactttctttctatatcatgactggttagtaagtgtctgtctcgagtggtaatgatgaccca |
216 |
Q |
| |
|
||||||||||||| |||| | |||||||||||| | ||| | | |||||||| |||||| ||||||||| || ||||||||||||||| || ||| | |
|
|
| T |
267365 |
attcaagagcttcggtcccatacaacccttctacttcatgcgtactttctatcccatgacaggttagtaattgcttgtctcgagtggtaacgacgactct |
267464 |
T |
|
| Q |
217 |
gcttccaaggccaaaccaatca |
238 |
Q |
| |
|
||||||| ||| ||||||||| |
|
|
| T |
267465 |
gcttccatagccgaaccaatca |
267486 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 129
Target Start/End: Complemental strand, 26137067 - 26137033
Alignment:
| Q |
95 |
ttaaaagccatccacctcaacaattcaagagcttc |
129 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||| |
|
|
| T |
26137067 |
ttaaaagccatccacctaaacaattcaagagcttc |
26137033 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0349 (Bit Score: 99; Significance: 6e-49; HSPs: 1)
Name: scaffold0349
Description:
Target: scaffold0349; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 19 - 241
Target Start/End: Original strand, 2466 - 2688
Alignment:
| Q |
19 |
aactaagggaagtcccgaagcatatgaaactgcacggtttaaaacttcttcataaattgaaggtactttgttattcttaaaagccatccacctcaacaat |
118 |
Q |
| |
|
|||||| ||||| || |||||||||| ||||||||||||||||| ||||| ||| |||||| || |||| | | |||||||||||||||||||||||| |
|
|
| T |
2466 |
aactaacggaaggccagaagcatatgcaactgcacggtttaaaatctcttcgtaacctgaaggaacattgtcacttttaaaagccatccacctcaacaat |
2565 |
T |
|
| Q |
119 |
tcaagagcttctgtcctacacaacccttctaatgcatactttctttctatatcatgactggttagtaagtgtctgtctcgagtggtaatgatgacccagc |
218 |
Q |
| |
|
|||||||||||||||| | |||||||||||| | ||| | | |||| ||| |||||| ||||||||||||| |||||||||||||||||||||| || |
|
|
| T |
2566 |
tcaagagcttctgtcccatacaacccttctacttcatgcatactttttatcccatgacaggttagtaagtgtttgtctcgagtggtaatgatgactttgc |
2665 |
T |
|
| Q |
219 |
ttccaaggccaaaccaatcaggt |
241 |
Q |
| |
|
||||| |||| |||||||||||| |
|
|
| T |
2666 |
ttccacggccgaaccaatcaggt |
2688 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0003 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0003
Description:
Target: scaffold0003; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 26 - 238
Target Start/End: Complemental strand, 60817 - 60605
Alignment:
| Q |
26 |
ggaagtcccgaagcatatgaaactgcacggtttaaaacttcttcataaattgaaggtactttgttattcttaaaagccatccacctcaacaattcaagag |
125 |
Q |
| |
|
||||| || |||||||| | |||| |||| || |||| | ||||||| ||||||| ||||||| ||| ||||||||||||||||||||||||||||||| |
|
|
| T |
60817 |
ggaaggccagaagcataagcaactacacgattcaaaatcttttcataacttgaaggaactttgtcatttttaaaagccatccacctcaacaattcaagag |
60718 |
T |
|
| Q |
126 |
cttctgtcctacacaacccttctaatgcatactttctttctatatcatgactggttagtaagtgtctgtctcgagtggtaatgatgacccagcttccaag |
225 |
Q |
| |
|
|||||||| | |||||||| || |||||| || ||||||| ||||||| || |||||||||| | ||||| ||||| |||||||| | ||||||| | |
|
|
| T |
60717 |
cttctgtcacattcaacccttttactgcatatgttttttctatctcatgacaggctagtaagtgtttatctcgggtggtgatgatgactcggcttccagg |
60618 |
T |
|
| Q |
226 |
gccaaaccaatca |
238 |
Q |
| |
|
|| ||||||||| |
|
|
| T |
60617 |
accgaaccaatca |
60605 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 73; Significance: 2e-33; HSPs: 8)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 26 - 238
Target Start/End: Complemental strand, 18075009 - 18074797
Alignment:
| Q |
26 |
ggaagtcccgaagcatatgaaactgcacggtttaaaacttcttcataaattgaaggtactttgttattcttaaaagccatccacctcaacaattcaagag |
125 |
Q |
| |
|
||||| || |||||||| | |||| |||| || |||| | ||||||| ||||||| ||||||| ||| ||||||||||||||||||||||||||||||| |
|
|
| T |
18075009 |
ggaaggccagaagcataagcaactacacgattcaaaatcttttcataacttgaaggaactttgtcatttttaaaagccatccacctcaacaattcaagag |
18074910 |
T |
|
| Q |
126 |
cttctgtcctacacaacccttctaatgcatactttctttctatatcatgactggttagtaagtgtctgtctcgagtggtaatgatgacccagcttccaag |
225 |
Q |
| |
|
|||||||| | |||||||| || |||||| || ||||||| ||||||| || |||||||||| | ||||| ||||| |||||||| | ||||||| | |
|
|
| T |
18074909 |
cttctgtcacattcaacccttttactgcatatgttttttctatctcatgacaggctagtaagtgtttatctcgggtggtgatgatgactcggcttccagg |
18074810 |
T |
|
| Q |
226 |
gccaaaccaatca |
238 |
Q |
| |
|
|| ||||||||| |
|
|
| T |
18074809 |
accgaaccaatca |
18074797 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 21 - 223
Target Start/End: Original strand, 18654402 - 18654604
Alignment:
| Q |
21 |
ctaagggaagtcccgaagcatatgaaactgcacggtttaaaacttcttcataaattgaaggtactttgttattcttaaaagccatccacctcaacaattc |
120 |
Q |
| |
|
|||| ||||| || |||||||| | ||||||||||||||||| ||||||||| ||||||| ||||||| | | |||||||||||||||||||||||||| |
|
|
| T |
18654402 |
ctaatggaaggccagaagcatacgcaactgcacggtttaaaatctcttcataacttgaaggaactttgtaaattttaaaagccatccacctcaacaattc |
18654501 |
T |
|
| Q |
121 |
aagagcttctgtcctacacaacccttctaatgcatactttctttctatatcatgactggttagtaagtgtctgtctcgagtggtaatgatgacccagctt |
220 |
Q |
| |
|
|||||| | | | || ||| ||||| || | ||| | | ||||||| |||||| || ||||||||||| ||| |||||||||||||| || | |||| |
|
|
| T |
18654502 |
aagagcattttccgtagacatcccttttacttcatgcataatttctatctcatgattgcttagtaagtgtttgttacgagtggtaatgataactctgctt |
18654601 |
T |
|
| Q |
221 |
cca |
223 |
Q |
| |
|
||| |
|
|
| T |
18654602 |
cca |
18654604 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 21 - 241
Target Start/End: Original strand, 18723010 - 18723230
Alignment:
| Q |
21 |
ctaagggaagtcccgaagcatatgaaactgcacggtttaaaacttcttcataaattgaaggtactttgttattcttaaaagccatccacctcaacaattc |
120 |
Q |
| |
|
|||| ||||| || |||||||| | |||||| |||||||||| ||||||||| ||||||| ||||||| | | |||||||||||||||||||||||||| |
|
|
| T |
18723010 |
ctaatggaaggccagaagcatacgcaactgctcggtttaaaatctcttcataacttgaaggaactttgtaacttttaaaagccatccacctcaacaattc |
18723109 |
T |
|
| Q |
121 |
aagagcttctgtcctacacaacccttctaatgcatactttctttctatatcatgactggttagtaagtgtctgtctcgagtggtaatgatgacccagctt |
220 |
Q |
| |
|
|||||| | | | || ||| ||||| || | ||| | | |||||| |||||| |||||||||| ||| ||| |||||||||||||| || | |||| |
|
|
| T |
18723110 |
aagagcattttccgtagacatcccttttacttcatgcataatttctacctcatgattggttagtaattgtttgttacgagtggtaatgataactctgctt |
18723209 |
T |
|
| Q |
221 |
ccaaggccaaaccaatcaggt |
241 |
Q |
| |
|
||| ||| |||||||||||| |
|
|
| T |
18723210 |
ccagagccgaaccaatcaggt |
18723230 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 21 - 223
Target Start/End: Original strand, 18678485 - 18678687
Alignment:
| Q |
21 |
ctaagggaagtcccgaagcatatgaaactgcacggtttaaaacttcttcataaattgaaggtactttgttattcttaaaagccatccacctcaacaattc |
120 |
Q |
| |
|
|||| ||||| || |||||||| ||||||||| ||||||| ||||||||| ||||||| ||||||| | | |||||||||||||||||||||||||| |
|
|
| T |
18678485 |
ctaatggaaggccagaagcatacacaactgcacgttttaaaatctcttcataacttgaaggaactttgtaacttttaaaagccatccacctcaacaattc |
18678584 |
T |
|
| Q |
121 |
aagagcttctgtcctacacaacccttctaatgcatactttctttctatatcatgactggttagtaagtgtctgtctcgagtggtaatgatgacccagctt |
220 |
Q |
| |
|
|||||| | | |||| ||| ||||| || | ||| | | ||||||| |||||| || ||||||||||| ||| |||||||||||||| || | |||| |
|
|
| T |
18678585 |
aagagcattttccctagacatcccttttacttcatgcataatttctatctcatgattgcttagtaagtgtttgttacgagtggtaatgataactctgctt |
18678684 |
T |
|
| Q |
221 |
cca |
223 |
Q |
| |
|
||| |
|
|
| T |
18678685 |
cca |
18678687 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 238
Target Start/End: Original strand, 18698325 - 18698542
Alignment:
| Q |
21 |
ctaagggaagtcccgaagcatatgaaactgcacggtttaaaacttcttcataaattgaaggtactttgttattcttaaaagccatccacctcaacaattc |
120 |
Q |
| |
|
|||| ||||| || |||||||| ||||||| |||| |||| ||||||||| ||||||| ||||||| ||| |||||||||||||||||||||||||| |
|
|
| T |
18698325 |
ctaatggaaggccagaagcatacacaactgcatggttaaaaatctcttcataacttgaaggaactttgtaatttttaaaagccatccacctcaacaattc |
18698424 |
T |
|
| Q |
121 |
aagagcttctgtcctacacaacccttctaatgcatactttctttctatatcatgactggttagtaagtgtctgtctcgagtggtaatgatgacccagctt |
220 |
Q |
| |
|
|||||| | | | || ||| ||||| || | ||| | ||||||| |||||| |||||||||||||| ||| |||||||||||||| || | |||| |
|
|
| T |
18698425 |
aagagcattttccgtagacatcccttttacttcatggataatttctatctcatgattggttagtaagtgtttgttacgagtggtaatgataactctgctt |
18698524 |
T |
|
| Q |
221 |
ccaaggccaaaccaatca |
238 |
Q |
| |
|
||| ||| ||||||||| |
|
|
| T |
18698525 |
ccacagccgaaccaatca |
18698542 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 21 - 210
Target Start/End: Original strand, 18730429 - 18730618
Alignment:
| Q |
21 |
ctaagggaagtcccgaagcatatgaaactgcacggtttaaaacttcttcataaattgaaggtactttgttattcttaaaagccatccacctcaacaattc |
120 |
Q |
| |
|
|||| ||||| || |||||||| ||||||| |||| |||| ||||||||| ||||||| ||||||| ||| |||||||||||||||||||||||||| |
|
|
| T |
18730429 |
ctaatggaaggccagaagcatacacaactgcatggttaaaaatctcttcataacttgaaggaactttgtaatttttaaaagccatccacctcaacaattc |
18730528 |
T |
|
| Q |
121 |
aagagcttctgtcctacacaacccttctaatgcatactttctttctatatcatgactggttagtaagtgtctgtctcgagtggtaatgat |
210 |
Q |
| |
|
|||||| | | | || ||| ||||| || | ||| | ||||||| |||||| |||||||||||||| ||| |||||||||||||| |
|
|
| T |
18730529 |
aagagcattttccgtagacatcccttttacttcatggataatttctatctcatgattggttagtaagtgtttgttacgagtggtaatgat |
18730618 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 47 - 126
Target Start/End: Original strand, 18688577 - 18688656
Alignment:
| Q |
47 |
actgcacggtttaaaacttcttcataaattgaaggtactttgttattcttaaaagccatccacctcaacaattcaagagc |
126 |
Q |
| |
|
|||||||||||||||| ||||||||| ||||||| ||||| | | | |||||||||||||||||||||||||||||||| |
|
|
| T |
18688577 |
actgcacggtttaaaatctcttcataacttgaaggaactttataacttttaaaagccatccacctcaacaattcaagagc |
18688656 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 180 - 244
Target Start/End: Original strand, 5090038 - 5090102
Alignment:
| Q |
180 |
ttagtaagtgtctgtctcgagtggtaatgatgacccagcttccaaggccaaaccaatcaggttct |
244 |
Q |
| |
|
|||| |||||| |||||||||||||||||||||| | ||| ||||| |||||||||||||||||| |
|
|
| T |
5090038 |
ttagcaagtgtttgtctcgagtggtaatgatgactctgctgccaagaccaaaccaatcaggttct |
5090102 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 171 - 237
Target Start/End: Complemental strand, 16691970 - 16691904
Alignment:
| Q |
171 |
catgactggttagtaagtgtctgtctcgagtggtaatgatgacccagcttccaaggccaaaccaatc |
237 |
Q |
| |
|
||||||| |||||||||||| |||||||||||||||||||||| | |||||| | ||||||||||| |
|
|
| T |
16691970 |
catgacttgttagtaagtgtttgtctcgagtggtaatgatgactctacttccaggaccaaaccaatc |
16691904 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0019 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0019
Description:
Target: scaffold0019; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 130
Target Start/End: Original strand, 57285 - 57332
Alignment:
| Q |
83 |
actttgttattcttaaaagccatccacctcaacaattcaagagcttct |
130 |
Q |
| |
|
||||||||||| || ||||| |||||||||||||||||||||||||| |
|
|
| T |
57285 |
actttgttatttttgaaagcattccacctcaacaattcaagagcttct |
57332 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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