View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21099_low_13 (Length: 201)
Name: NF21099_low_13
Description: NF21099
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21099_low_13 |
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Alignment Details
Target: chr8 (Bit Score: 153; Significance: 3e-81; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 44 - 196
Target Start/End: Complemental strand, 38275205 - 38275053
Alignment:
| Q |
44 |
aaatcacactcacgctccatgaaaactagggtttgagtttgatcctcactctcttgtttcagtaaccacacttatcaatggcttcttcatcttctctact |
143 |
Q |
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| T |
38275205 |
aaatcacactcacgctccatgaaaactagggtttgagtttgatcctcactctcttgtttcagtaaccacacttatcaatggcttcttcatcttctctact |
38275106 |
T |
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| Q |
144 |
cttaaccgaactcaattttcttgctcctcaattcacaccaaaacgtcgtcgtt |
196 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38275105 |
cttaaccgaactcaattttcttgctcctcaattcacaccaaaacgtcgtcgtt |
38275053 |
T |
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