View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21099_low_2 (Length: 396)

Name: NF21099_low_2
Description: NF21099
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21099_low_2
NF21099_low_2
[»] scaffold0180 (1 HSPs)
scaffold0180 (14-379)||(10323-10688)
[»] scaffold0298 (1 HSPs)
scaffold0298 (14-379)||(112-478)
[»] chr3 (36 HSPs)
chr3 (14-379)||(2247825-2248191)
chr3 (14-270)||(24546741-24546996)
chr3 (147-270)||(24549207-24549330)
chr3 (100-265)||(25104036-25104199)
chr3 (16-130)||(12470653-12470768)
chr3 (16-130)||(18699558-18699673)
chr3 (16-130)||(43888883-43888998)
chr3 (186-270)||(17208236-17208320)
chr3 (186-270)||(14520158-14520242)
chr3 (45-130)||(22758962-22759047)
chr3 (16-123)||(12511700-12511808)
chr3 (325-379)||(1988310-1988364)
chr3 (263-327)||(29907615-29907680)
chr3 (263-327)||(29948781-29948846)
chr3 (263-327)||(29997935-29998000)
chr3 (263-327)||(45803342-45803407)
chr3 (274-327)||(22841290-22841344)
chr3 (263-327)||(14641559-14641624)
chr3 (263-327)||(17208500-17208565)
chr3 (264-327)||(14152410-14152474)
chr3 (263-327)||(14520422-14520487)
chr3 (264-303)||(15566721-15566760)
chr3 (267-323)||(5215627-5215684)
chr3 (321-362)||(11325238-11325279)
chr3 (263-327)||(12917317-12917382)
chr3 (321-362)||(13836959-13837000)
chr3 (221-270)||(17758665-17758714)
chr3 (221-270)||(19059985-19060034)
chr3 (323-361)||(10684-10722)
chr3 (274-327)||(17669709-17669763)
chr3 (274-327)||(54875485-54875539)
chr3 (14-51)||(11563316-11563353)
chr3 (321-362)||(15233012-15233053)
chr3 (321-362)||(15238880-15238921)
chr3 (221-270)||(40038987-40039036)
chr3 (323-375)||(8927736-8927788)
[»] chr8 (35 HSPs)
chr8 (14-377)||(38184873-38185237)
chr8 (14-285)||(20494554-20494825)
chr8 (14-213)||(18023647-18023846)
chr8 (55-270)||(21514271-21514487)
chr8 (72-270)||(22365990-22366186)
chr8 (86-270)||(22723183-22723368)
chr8 (242-330)||(18023564-18023653)
chr8 (186-270)||(4380865-4380949)
chr8 (197-270)||(18816551-18816624)
chr8 (72-243)||(24907801-24907986)
chr8 (263-327)||(18816306-18816371)
chr8 (264-327)||(22208246-22208310)
chr8 (264-327)||(22483763-22483827)
chr8 (321-379)||(21860709-21860767)
chr8 (263-324)||(36732426-36732488)
chr8 (328-378)||(15635271-15635322)
chr8 (263-327)||(21514667-21514732)
chr8 (263-303)||(4380653-4380693)
chr8 (321-362)||(20387306-20387347)
chr8 (321-362)||(22617455-22617496)
chr8 (324-377)||(22920150-22920203)
chr8 (261-324)||(22258320-22258384)
chr8 (263-326)||(22483914-22483978)
chr8 (276-327)||(12577869-12577920)
chr8 (274-327)||(21399704-21399758)
chr8 (261-327)||(21676511-21676576)
chr8 (261-327)||(21676604-21676669)
chr8 (261-327)||(21678857-21678922)
chr8 (274-327)||(21794197-21794251)
chr8 (274-327)||(22345151-22345205)
chr8 (274-327)||(22356811-22356865)
chr8 (14-51)||(18816644-18816681)
chr8 (221-270)||(24239756-24239805)
chr8 (263-324)||(36305974-36306035)
chr8 (274-326)||(23884158-23884209)
[»] chr7 (47 HSPs)
chr7 (14-379)||(34958072-34958438)
chr7 (14-379)||(831809-832174)
chr7 (14-379)||(1196989-1197354)
chr7 (55-270)||(47095032-47095248)
chr7 (125-270)||(4690917-4691064)
chr7 (72-270)||(18079554-18079753)
chr7 (132-270)||(43745314-43745452)
chr7 (186-267)||(20252446-20252527)
chr7 (16-127)||(14259204-14259316)
chr7 (16-130)||(14928417-14928532)
chr7 (16-130)||(15351883-15351998)
chr7 (186-270)||(15575905-15575989)
chr7 (186-265)||(18874922-18875001)
chr7 (16-130)||(32302035-32302150)
chr7 (132-270)||(48212984-48213107)
chr7 (321-379)||(14153050-14153108)
chr7 (321-379)||(37727016-37727074)
chr7 (266-327)||(708440-708502)
chr7 (264-325)||(20252195-20252257)
chr7 (263-327)||(15575660-15575725)
chr7 (321-379)||(42041987-42042045)
chr7 (263-327)||(43745632-43745697)
chr7 (263-327)||(47095428-47095493)
chr7 (264-327)||(8513764-8513828)
chr7 (277-327)||(38299738-38299789)
chr7 (263-327)||(19195588-19195652)
chr7 (264-327)||(8488105-8488169)
chr7 (264-303)||(4690699-4690738)
chr7 (323-362)||(12201275-12201314)
chr7 (266-324)||(18874679-18874740)
chr7 (173-253)||(3192149-3192230)
chr7 (229-270)||(19070012-19070053)
chr7 (18-59)||(38295239-38295280)
chr7 (321-361)||(12207881-12207921)
chr7 (323-379)||(15726150-15726206)
chr7 (264-327)||(43276755-43276818)
chr7 (323-362)||(1613378-1613417)
chr7 (274-327)||(58424-58478)
chr7 (274-327)||(16250233-16250287)
chr7 (173-270)||(16368427-16368525)
chr7 (274-327)||(33556116-33556170)
chr7 (261-299)||(42565872-42565910)
chr7 (325-362)||(7529952-7529989)
chr7 (221-270)||(16383825-16383874)
chr7 (263-324)||(19283030-19283094)
chr7 (321-362)||(39995046-39995087)
chr7 (321-361)||(15731066-15731106)
[»] chr4 (28 HSPs)
chr4 (14-379)||(15747732-15748097)
chr4 (14-379)||(17142754-17143115)
chr4 (14-270)||(14630676-14630933)
chr4 (55-270)||(26445787-26446003)
chr4 (14-227)||(16025917-16026131)
chr4 (132-270)||(2424643-2424781)
chr4 (87-270)||(10237326-10237521)
chr4 (18-130)||(15011598-15011711)
chr4 (321-379)||(14035562-14035620)
chr4 (263-327)||(25513827-25513892)
chr4 (148-207)||(25513653-25513712)
chr4 (263-324)||(14631111-14631173)
chr4 (321-378)||(30147760-30147817)
chr4 (323-379)||(14049425-14049481)
chr4 (261-327)||(9638984-9639051)
chr4 (263-327)||(16296914-16296979)
chr4 (264-324)||(33186880-33186941)
chr4 (263-327)||(35660932-35660997)
chr4 (264-327)||(12424301-12424367)
chr4 (263-325)||(26446183-26446246)
chr4 (323-366)||(13899044-13899087)
chr4 (221-270)||(15213681-15213730)
chr4 (221-270)||(54363351-54363400)
chr4 (321-361)||(16370912-16370952)
chr4 (221-270)||(19622239-19622288)
chr4 (323-359)||(3863479-3863515)
chr4 (323-359)||(3872236-3872272)
chr4 (321-353)||(32490564-32490596)
[»] scaffold1186 (2 HSPs)
scaffold1186 (14-270)||(1561-1818)
scaffold1186 (263-324)||(1996-2058)
[»] scaffold0005 (2 HSPs)
scaffold0005 (14-270)||(186450-186707)
scaffold0005 (263-324)||(186210-186272)
[»] chr5 (20 HSPs)
chr5 (14-270)||(1627324-1627582)
chr5 (55-270)||(660373-660586)
chr5 (132-270)||(18744540-18744677)
chr5 (186-270)||(23199463-23199547)
chr5 (323-379)||(17813303-17813359)
chr5 (264-327)||(18744851-18744915)
chr5 (264-327)||(23199218-23199282)
chr5 (321-379)||(6766577-6766635)
chr5 (263-327)||(16063727-16063792)
chr5 (321-379)||(24276673-24276731)
chr5 (321-379)||(24385482-24385540)
chr5 (321-362)||(7786001-7786042)
chr5 (263-326)||(660766-660829)
chr5 (263-303)||(6551326-6551366)
chr5 (323-366)||(26754293-26754336)
chr5 (274-327)||(32607327-32607381)
chr5 (321-362)||(21553580-21553621)
chr5 (321-362)||(21980258-21980299)
chr5 (14-58)||(20312904-20312948)
chr5 (263-327)||(20313253-20313316)
[»] scaffold0878 (2 HSPs)
scaffold0878 (55-270)||(3678-3894)
scaffold0878 (263-327)||(3433-3498)
[»] scaffold0369 (1 HSPs)
scaffold0369 (55-269)||(15872-16087)
[»] chr1 (27 HSPs)
chr1 (55-270)||(28476990-28477206)
chr1 (72-263)||(20822616-20822819)
chr1 (173-270)||(20836533-20836630)
chr1 (186-270)||(24719766-24719850)
chr1 (321-379)||(13227708-13227766)
chr1 (321-379)||(21180453-21180511)
chr1 (213-270)||(12710623-12710680)
chr1 (264-325)||(24719523-24719585)
chr1 (321-379)||(24960705-24960762)
chr1 (263-324)||(50544848-50544910)
chr1 (263-327)||(12710843-12710908)
chr1 (263-327)||(38056683-38056748)
chr1 (321-379)||(29535896-29535954)
chr1 (263-327)||(22145677-22145742)
chr1 (263-327)||(28476745-28476810)
chr1 (274-324)||(17901808-17901859)
chr1 (263-323)||(6834152-6834213)
chr1 (72-133)||(20836448-20836509)
chr1 (261-324)||(8276003-8276067)
chr1 (274-327)||(8306593-8306647)
chr1 (325-379)||(14801211-14801265)
chr1 (325-379)||(14810085-14810139)
chr1 (263-327)||(24007236-24007301)
chr1 (279-324)||(635018-635064)
chr1 (261-299)||(39061295-39061333)
chr1 (224-270)||(41931308-41931354)
chr1 (274-325)||(35895086-35895138)
[»] chr2 (18 HSPs)
chr2 (72-270)||(29114349-29114559)
chr2 (186-270)||(21315734-21315818)
chr2 (186-270)||(21369004-21369088)
chr2 (186-270)||(21335524-21335608)
chr2 (16-130)||(23068535-23068650)
chr2 (210-268)||(23610356-23610414)
chr2 (264-327)||(21315487-21315551)
chr2 (264-327)||(21335277-21335341)
chr2 (323-366)||(38929209-38929252)
chr2 (267-327)||(21369273-21369334)
chr2 (263-327)||(23610602-23610667)
chr2 (321-361)||(25652045-25652085)
chr2 (55-108)||(22686793-22686846)
chr2 (321-361)||(24161099-24161139)
chr2 (263-303)||(34491276-34491316)
chr2 (274-327)||(23801483-23801537)
chr2 (321-362)||(23086222-23086263)
chr2 (14-51)||(27852276-27852313)
[»] scaffold0516 (3 HSPs)
scaffold0516 (55-161)||(7659-7766)
scaffold0516 (181-270)||(7578-7667)
scaffold0516 (263-327)||(5316-5381)
[»] scaffold0056 (2 HSPs)
scaffold0056 (174-270)||(15878-15974)
scaffold0056 (263-324)||(18251-18313)
[»] scaffold0034 (1 HSPs)
scaffold0034 (16-130)||(120763-120878)
[»] scaffold0011 (1 HSPs)
scaffold0011 (14-130)||(126598-126715)
[»] chr6 (26 HSPs)
chr6 (16-130)||(15704696-15704811)
chr6 (16-130)||(19772794-19772909)
chr6 (186-270)||(20410766-20410850)
chr6 (14-132)||(20183464-20183583)
chr6 (14-132)||(22152408-22152527)
chr6 (137-207)||(21686252-21686322)
chr6 (14-70)||(19009111-19009167)
chr6 (321-379)||(29266167-29266225)
chr6 (263-327)||(21683086-21683151)
chr6 (264-327)||(23658066-23658130)
chr6 (176-270)||(17856515-17856610)
chr6 (321-379)||(15816836-15816894)
chr6 (263-324)||(19825500-19825562)
chr6 (264-321)||(20410529-20410587)
chr6 (263-304)||(18982548-18982589)
chr6 (323-366)||(14995422-14995465)
chr6 (274-324)||(29045258-29045309)
chr6 (14-62)||(25921632-25921681)
chr6 (323-379)||(1589955-1590011)
chr6 (263-303)||(15998865-15998905)
chr6 (323-367)||(22347312-22347356)
chr6 (323-362)||(17026586-17026625)
chr6 (321-375)||(1639777-1639830)
chr6 (274-327)||(10446204-10446258)
chr6 (261-299)||(24506155-24506193)
chr6 (321-361)||(1585055-1585095)
[»] scaffold0162 (1 HSPs)
scaffold0162 (186-270)||(24138-24222)
[»] scaffold0452 (2 HSPs)
scaffold0452 (16-130)||(12750-12865)
scaffold0452 (221-270)||(2843-2892)
[»] scaffold0292 (1 HSPs)
scaffold0292 (16-130)||(7365-7480)
[»] scaffold0205 (2 HSPs)
scaffold0205 (16-130)||(30463-30578)
scaffold0205 (14-58)||(5992-6036)
[»] scaffold0203 (2 HSPs)
scaffold0203 (186-270)||(18196-18282)
scaffold0203 (263-303)||(17976-18016)
[»] scaffold0096 (1 HSPs)
scaffold0096 (16-126)||(21919-22030)
[»] scaffold0032 (1 HSPs)
scaffold0032 (186-270)||(62107-62193)
[»] scaffold0019 (1 HSPs)
scaffold0019 (16-130)||(29880-29995)
[»] scaffold0018 (1 HSPs)
scaffold0018 (16-130)||(21504-21619)
[»] scaffold0043 (2 HSPs)
scaffold0043 (16-130)||(27786-27901)
scaffold0043 (16-130)||(42644-42759)
[»] scaffold0468 (1 HSPs)
scaffold0468 (171-270)||(11023-11123)
[»] scaffold0054 (1 HSPs)
scaffold0054 (14-92)||(65104-65183)
[»] scaffold0077 (1 HSPs)
scaffold0077 (16-103)||(40255-40343)
[»] scaffold0414 (1 HSPs)
scaffold0414 (186-270)||(11416-11502)
[»] scaffold0042 (2 HSPs)
scaffold0042 (321-379)||(67522-67580)
scaffold0042 (323-357)||(53659-53693)
[»] scaffold0676 (1 HSPs)
scaffold0676 (263-327)||(2857-2922)
[»] scaffold1783 (1 HSPs)
scaffold1783 (321-379)||(1165-1223)
[»] scaffold0117 (2 HSPs)
scaffold0117 (321-379)||(21666-21724)
scaffold0117 (321-379)||(34349-34407)
[»] scaffold0023 (1 HSPs)
scaffold0023 (321-379)||(105819-105877)
[»] scaffold0672 (1 HSPs)
scaffold0672 (321-379)||(7645-7703)
[»] scaffold0607 (1 HSPs)
scaffold0607 (321-379)||(3625-3683)
[»] scaffold0575 (1 HSPs)
scaffold0575 (321-379)||(9293-9351)
[»] scaffold0338 (1 HSPs)
scaffold0338 (321-379)||(3020-3078)
[»] scaffold0216 (1 HSPs)
scaffold0216 (321-379)||(22160-22218)
[»] scaffold0064 (1 HSPs)
scaffold0064 (321-379)||(68806-68864)
[»] scaffold0061 (2 HSPs)
scaffold0061 (263-324)||(14600-14662)
scaffold0061 (263-324)||(23658-23720)
[»] scaffold0594 (1 HSPs)
scaffold0594 (263-327)||(2223-2288)
[»] scaffold0505 (1 HSPs)
scaffold0505 (263-327)||(4912-4977)
[»] scaffold0231 (2 HSPs)
scaffold0231 (225-270)||(17777-17822)
scaffold0231 (263-325)||(17534-17597)
[»] scaffold0220 (1 HSPs)
scaffold0220 (263-327)||(13925-13990)
[»] scaffold0431 (1 HSPs)
scaffold0431 (264-327)||(5608-5674)
[»] scaffold0335 (1 HSPs)
scaffold0335 (328-378)||(1616-1667)
[»] scaffold0413 (1 HSPs)
scaffold0413 (321-379)||(11478-11536)
[»] scaffold0247 (1 HSPs)
scaffold0247 (263-324)||(1052-1114)
[»] scaffold0071 (1 HSPs)
scaffold0071 (321-379)||(51819-51877)
[»] scaffold0285 (1 HSPs)
scaffold0285 (14-59)||(19410-19455)
[»] scaffold0183 (1 HSPs)
scaffold0183 (221-270)||(11120-11169)
[»] scaffold0174 (2 HSPs)
scaffold0174 (263-327)||(11592-11657)
scaffold0174 (278-327)||(5445-5495)
[»] scaffold0017 (1 HSPs)
scaffold0017 (263-304)||(26703-26744)
[»] scaffold0014 (1 HSPs)
scaffold0014 (321-362)||(189550-189591)
[»] scaffold0007 (1 HSPs)
scaffold0007 (263-304)||(16454-16495)
[»] scaffold0004 (2 HSPs)
scaffold0004 (263-327)||(66083-66148)
scaffold0004 (271-327)||(111344-111401)
[»] scaffold1256 (1 HSPs)
scaffold1256 (263-303)||(2236-2276)
[»] scaffold0106 (2 HSPs)
scaffold0106 (326-366)||(36909-36949)
scaffold0106 (323-366)||(29312-29355)
[»] scaffold0213 (1 HSPs)
scaffold0213 (264-303)||(19184-19223)
[»] scaffold0090 (1 HSPs)
scaffold0090 (323-362)||(31637-31676)
[»] scaffold0058 (1 HSPs)
scaffold0058 (261-299)||(59695-59733)
[»] scaffold1204 (1 HSPs)
scaffold1204 (221-270)||(148-197)
[»] scaffold0388 (1 HSPs)
scaffold0388 (321-362)||(15295-15336)
[»] scaffold0086 (1 HSPs)
scaffold0086 (263-323)||(35201-35262)
[»] scaffold0001 (1 HSPs)
scaffold0001 (321-361)||(152306-152346)
[»] scaffold1913 (1 HSPs)
scaffold1913 (323-362)||(656-695)
[»] scaffold0853 (1 HSPs)
scaffold0853 (285-327)||(2465-2508)
[»] scaffold0322 (1 HSPs)
scaffold0322 (323-362)||(20018-20057)
[»] scaffold0160 (1 HSPs)
scaffold0160 (323-362)||(15676-15715)
[»] scaffold0057 (1 HSPs)
scaffold0057 (323-366)||(1390-1433)
[»] scaffold0371 (2 HSPs)
scaffold0371 (321-355)||(8344-8378)
scaffold0371 (264-297)||(10487-10520)
[»] scaffold0328 (1 HSPs)
scaffold0328 (263-327)||(18651-18717)
[»] scaffold0021 (2 HSPs)
scaffold0021 (261-299)||(17080-17118)
scaffold0021 (261-299)||(26611-26649)
[»] scaffold0859 (1 HSPs)
scaffold0859 (14-51)||(4384-4421)
[»] scaffold0819 (1 HSPs)
scaffold0819 (263-304)||(5228-5269)
[»] scaffold0730 (1 HSPs)
scaffold0730 (274-326)||(6517-6570)
[»] scaffold0234 (1 HSPs)
scaffold0234 (321-354)||(26183-26216)
[»] scaffold0108 (1 HSPs)
scaffold0108 (264-324)||(6395-6456)
[»] scaffold0028 (1 HSPs)
scaffold0028 (14-51)||(3405-3442)
[»] scaffold0008 (1 HSPs)
scaffold0008 (321-378)||(11585-11642)
[»] scaffold0562 (1 HSPs)
scaffold0562 (323-359)||(3055-3091)
[»] scaffold0130 (1 HSPs)
scaffold0130 (326-362)||(2055-2091)


Alignment Details
Target: scaffold0180 (Bit Score: 322; Significance: 0; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 322; E-Value: 0
Query Start/End: Original strand, 14 - 379
Target Start/End: Original strand, 10323 - 10688
Alignment:
Q  14 atataaaacatgacccaaaacattaatttacaaaatcacacttttcataaaagttctaaagaacagcaaaagttcacttcaagctttatgcttaagatta 113  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| |||| |||||||||    
T  10323 atataaaacatgacccaaaactttaatttacaaaatcacacttttcataaaagttctcaagaacaacaaaagttcacttcaagctctatggttaagatta 10422  T
Q  114 cccaaggtttcaatcatcaaaacaacatctcataacaaaaacaacaactatcagaagtgaattcatcaacatcaacattatacttcaccaattttgagca 213  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| |||||||||||||| |||||||||||||    
T  10423 cccaaggtttcaatcatcaaaacaacatctcataacaaaaacaagaacaatcagaagtgaattcatcaacaacaacattatacttcgccaattttgagca 10522  T
Q  214 aaaacacaagtatacatatatacataacttgagcatgtaaattcatcatcaacaactacaatgttaaaccctttttcagaattatacaaccaattttaga 313  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||    
T  10523 aaaacacaagtatacatatatacataacttgagcatgtaaattcatcatcaacaactacaatgttaaaccctttttcagaattatacaaccatctttaga 10622  T
Q  314 gaaagctagtcccaatttttcccaattcaatccccaaaactgtttacagcattgctatatgattat 379  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10623 gaaagctagtcccaatttttcccaattcaatccccaaaactgtttacagcattgctatatgattat 10688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 319; Significance: 1e-180; HSPs: 1)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 319; E-Value: 1e-180
Query Start/End: Original strand, 14 - 379
Target Start/End: Original strand, 112 - 478
Alignment:
Q  14 atataaaacatgacccaaaacattaatttacaaaatcacacttttcataaaagttctaaagaacagcaaaagttcacttcaagctttatgcttaagatta 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||  ||| |||||||||    
T  112 atataaaacatgacccaaaacattaatttacaaaatcacacttttcataaaagttctcaagaacaacaaaagttcacttcaagctcaatggttaagatta 211  T
Q  114 cccaaggtttcaatcatcaaaacaacatctcataacaaaaacaacaactatcagaagtgaattcatcaacatcaacattatacttcaccaattttgagca 213  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  212 cccaaggtttcaatcaacaaaacaacatctcataacaaaaacaacaacaatcagaagtgaattcatcaacaacaacattatacttcaccaattttgagca 311  T
Q  214 aaaacacaagtatacatatatacataacttgagcatgtaaattcatcatcaacaactacaatgttaaaccctttttcagaattatacaaccaat-tttag 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  312 aaaacacaagtatacatatatacataacttgagcatgtaaattcatcatcaacaactacaatgttaaaccctttttcagaattatacaacccatctttag 411  T
Q  313 agaaagctagtcccaatttttcccaattcaatccccaaaactgtttacagcattgctatatgattat 379  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  412 agaaagctagtcccaatttttcccaattcaatccccaaaactgtttacagcattgctatataattat 478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 311; Significance: 1e-175; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 14 - 379
Target Start/End: Complemental strand, 2248191 - 2247825
Alignment:
Q  14 atataaaacatgacccaaaacattaatttacaaaatcacacttttcataaaagttctaaagaacagcaaaagttcacttcaagctttatgcttaagatta 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| |||| |||||||||    
T  2248191 atataaaacatgacccaaaacattaatttacaaaatcacacttttcataaaagttctcaagaacaacaaaagttcacttcaagctctatggttaagatta 2248092  T
Q  114 cccaaggtttcaatcatcaaaacaacatctcataacaaaaacaacaactatcagaagtgaattcatcaacatcaacattatacttcaccaattttgagca 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  2248091 cccaaggtttcaatcatcaaaacaacatctcataacaaaaacaacaacaatcagaagtgaattcatcaacaacaacattatacttcaccaattttgagca 2247992  T
Q  214 aaaacacaagtatacatatatacataacttgagcatgtaaattcatcatcaacaactacaatgttaaaccctttttcagaattatacaaccaat-tttag 312  Q
    |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  2247991 aaaacataagtatgcatatatacataacttgagcatgtaaattcatcatcaacaactacaatgttaaaccctttttcagaattatacaacccatctttag 2247892  T
Q  313 agaaagctagtcccaatttttcccaattcaatccccaaaactgtttacagcattgctatatgattat 379  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||| |||||||||||||    
T  2247891 agaaagctagtcccaatttttcccaattcaatccccaaaattgtttacaacatcgctatatgattat 2247825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 14 - 270
Target Start/End: Original strand, 24546741 - 24546996
Alignment:
Q  14 atataaaacatgacccaaaacattaatttacaaaa-tcacacttttcataaaagttctaaagaacagcaaaagttcacttcaagctttatgcttaagatt 112  Q
    ||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||||| ||||||| ||||||||||||||||||| |||| ||||||||    
T  24546741 atataaaacatgacccaaaacattactttacaaaaatcacatttttcataaaagttctcaagaacaacaaaagttcacttcaagctctatggttaagatt 24546840  T
Q  113 acccaaggtttcaatcatcaaaacaacatctcataacaaaaacaacaactatcagaagtgaattcatcaacatcaacattatacttcaccaattttgagc 212  Q
    ||||||| ||||||| |||||||  |||| |||||| |||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||| ||    
T  24546841 acccaagatttcaataatcaaaa--acatgtcataataaaaacaacaacaatcagaagtgaattcatcaacaacaacattatacttcaccaattttgggc 24546938  T
Q  213 aaaaacacaagtatacatatatacataacttgagcatgtaaattcatcatcaacaact 270  Q
    || || ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24546939 aacaatacaagtatacatatatacataacttgagcatgtaaattcatcatcaacaact 24546996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 147 - 270
Target Start/End: Complemental strand, 24549330 - 24549207
Alignment:
Q  147 aacaaaaacaacaactatcagaagtgaattcatcaacatcaacattatacttcaccaattttgagcaaaaacacaagtatacatatatacataacttgag 246  Q
    |||| |||||||||| || ||||||||||||||||||| |||||||||||||||||||||||| |||| || ||||||||||||||||||||||||||||    
T  24549330 aacataaacaacaacaataagaagtgaattcatcaacaacaacattatacttcaccaattttgggcaagaatacaagtatacatatatacataacttgag 24549231  T
Q  247 catgtaaattcatcatcaacaact 270  Q
    ||||||||||||||||||||||||    
T  24549230 catgtaaattcatcatcaacaact 24549207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 100 - 265
Target Start/End: Complemental strand, 25104199 - 25104036
Alignment:
Q  100 tatgcttaagattacccaaggtttcaatcatcaaaacaacatctcataacaaaaacaacaactatcagaagtgaattcatcaacatcaacattatacttc 199  Q
    |||| |||||||||| ||||||||||||||||||  ||||  |||| ||  | ||||| ||| |||| ||||||||||||||||| |||||||||| |||    
T  25104199 tatggttaagattactcaaggtttcaatcatcaa--caactactcacaatcacaacaataacaatcataagtgaattcatcaacaacaacattatagttc 25104102  T
Q  200 accaattttgagcaaaaacacaagtatacatatatacataacttgagcatgtaaattcatcatcaa 265  Q
    | |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  25104101 atcaattttgagcaaaaatacaagtatacatatatacataacttgagcatgtaaattcatcatcaa 25104036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 12470653 - 12470768
Alignment:
Q  16 ataaaacatgacccaaaacattaatttacaaaa-tcacacttttcataaaagttctaaagaacagcaaaagttcacttcaagctttatgcttaagattac 114  Q
    |||||| |||||||||||||||| ||||||||| ||||| |||||||||||||||| || |||| ||||||||||||||||||| |||| ||||||||||    
T  12470653 ataaaagatgacccaaaacattattttacaaaaatcacatttttcataaaagttctcaaaaacaacaaaagttcacttcaagctctatggttaagattac 12470752  T
Q  115 ccaaggtttcaatcat 130  Q
    ||||||||||||||||    
T  12470753 ccaaggtttcaatcat 12470768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 18699673 - 18699558
Alignment:
Q  16 ataaaacatgacccaaaacattaatttacaaaa-tcacacttttcataaaagttctaaagaacagcaaaagttcacttcaagctttatgcttaagattac 114  Q
    |||||| |||||||||||||||| ||||||||| ||||| |||||||||||||||| ||||||| ||||||||||||||||||| |||| || |||||||    
T  18699673 ataaaagatgacccaaaacattattttacaaaaatcacatttttcataaaagttctcaagaacaacaaaagttcacttcaagctctatggttcagattac 18699574  T
Q  115 ccaaggtttcaatcat 130  Q
    ||||||||||||||||    
T  18699573 ccaaggtttcaatcat 18699558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 43888998 - 43888883
Alignment:
Q  16 ataaaacatgacccaaaacattaatttacaaaa-tcacacttttcataaaagttctaaagaacagcaaaagttcacttcaagctttatgcttaagattac 114  Q
    |||||| |||||||||||||||| ||||||||| ||||| |||||||||||||||| ||||||| ||||||||||||||||||| |||| ||||||||||    
T  43888998 ataaaagatgacccaaaacattattttacaaaaatcacatttttcataaaagttctcaagaacaacaaaagttcacttcaagctctatggttaagattac 43888899  T
Q  115 ccaaggtttcaatcat 130  Q
    |||| |||||||||||    
T  43888898 ccaatgtttcaatcat 43888883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 186 - 270
Target Start/End: Original strand, 17208236 - 17208320
Alignment:
Q  186 caacattatacttcaccaattttgagcaaaaacacaagtatacatatatacataacttgagcatgtaaattcatcatcaacaact 270  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  17208236 caacatcatacttcaccaattttgagcaaaaacacaagtatacatatatacataacttgagcatataaaatcatcatcaacaact 17208320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 186 - 270
Target Start/End: Original strand, 14520158 - 14520242
Alignment:
Q  186 caacattatacttcaccaattttgagcaaaaacacaagtatacatatatacataacttgagcatgtaaattcatcatcaacaact 270  Q
    |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  14520158 caacatcatatttcaccaattttgagcaaaaacacaagtatacatatatacataacttaagcatataaattcatcatcaacaact 14520242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 45 - 130
Target Start/End: Complemental strand, 22759047 - 22758962
Alignment:
Q  45 aaaatcacacttttcataaaagttctaaagaacagcaaaagttcacttcaagctttatgcttaagattacccaaggtttcaatcat 130  Q
    ||||||||| |||||||||||||||| ||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  22759047 aaaatcacatttttcataaaagttctcaagaacaacaaaagttcacttcaagctctatggttaagattacccaaggtttcaatcat 22758962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 16 - 123
Target Start/End: Original strand, 12511700 - 12511808
Alignment:
Q  16 ataaaacatgacccaaaacattaatttacaaaa-tcacacttttcataaaagttctaaagaacagcaaaagttcacttcaagctttatgcttaagattac 114  Q
    |||||| |||||| ||||||||| ||||||||| ||||| ||||||||||| |||| ||||||| ||||||||||||||||||| |||| ||||||||||    
T  12511700 ataaaagatgaccgaaaacattattttacaaaaatcacatttttcataaaaattctcaagaacaacaaaagttcacttcaagctctatggttaagattac 12511799  T
Q  115 ccaaggttt 123  Q
    |||||||||    
T  12511800 ccaaggttt 12511808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 325 - 379
Target Start/End: Complemental strand, 1988364 - 1988310
Alignment:
Q  325 ccaatttttcccaattcaatccccaaaactgtttacagcattgctatatgattat 379  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1988364 ccaatttttcccaattcaatccccaaaactgtttacagcattgctatatgattat 1988310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 263 - 327
Target Start/End: Original strand, 29907615 - 29907680
Alignment:
Q  263 caacaactacaatgttaaaccctttttcagaattatacaa-ccaattttagagaaagctagtccca 327  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||| ||| |||||||||||||||    
T  29907615 caacaactacaaggttaaaccctttttcagaattatacaacccaatattaaagaaagctagtccca 29907680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 263 - 327
Target Start/End: Original strand, 29948781 - 29948846
Alignment:
Q  263 caacaactacaatgttaaaccctttttcagaattatacaa-ccaattttagagaaagctagtccca 327  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||| ||| |||||||||||||||    
T  29948781 caacaactacaaggttaaaccctttttcagaattatacaacccaatattaaagaaagctagtccca 29948846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 263 - 327
Target Start/End: Original strand, 29997935 - 29998000
Alignment:
Q  263 caacaactacaatgttaaaccctttttcagaattatacaa-ccaattttagagaaagctagtccca 327  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||| ||| |||||||||||||||    
T  29997935 caacaactacaaggttaaaccctttttcagaattatacaacccaatattaaagaaagctagtccca 29998000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 263 - 327
Target Start/End: Complemental strand, 45803407 - 45803342
Alignment:
Q  263 caacaactacaatgttaaaccctttttcagaattatacaaccaatt-ttagagaaagctagtccca 327  Q
    ||||||| || ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  45803407 caacaacaacgatgttaaaccctttttcagaattatacaacccattattagagaaagctagtccca 45803342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 274 - 327
Target Start/End: Complemental strand, 22841344 - 22841290
Alignment:
Q  274 atgttaaaccctttttcagaattatacaaccaatt-ttagagaaagctagtccca 327  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  22841344 atgttaaaccctttttcagaattatacaacccattattagagaaagctagtccca 22841290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 263 - 327
Target Start/End: Complemental strand, 14641624 - 14641559
Alignment:
Q  263 caacaactacaatgttaaaccctttttcagaattatacaaccaatt-ttagagaaagctagtccca 327  Q
    |||||||||||| |||||||||||||| |||||||||||||| ||| ||||||||||||| |||||    
T  14641624 caacaactacaaggttaaacccttttttagaattatacaacccattattagagaaagctaatccca 14641559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 263 - 327
Target Start/End: Original strand, 17208500 - 17208565
Alignment:
Q  263 caacaactacaatgttaaaccctttttcagaattatacaac-caattttagagaaagctagtccca 327  Q
    |||||||||||| |||||| ||||||||||||||||||||| || | |||||||||||||||||||    
T  17208500 caacaactacaaggttaaatcctttttcagaattatacaactcattattagagaaagctagtccca 17208565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 264 - 327
Target Start/End: Complemental strand, 14152474 - 14152410
Alignment:
Q  264 aacaactacaatgttaaaccctttttcagaattatacaac-caattttagagaaagctagtccca 327  Q
    ||||||||||| |||||||||||||||||||| ||||||| || | |||||||||||||||||||    
T  14152474 aacaactacaaggttaaaccctttttcagaatgatacaactcattattagagaaagctagtccca 14152410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 263 - 327
Target Start/End: Original strand, 14520422 - 14520487
Alignment:
Q  263 caacaactacaatgttaaaccctttttcagaattatacaaccaatt-ttagagaaagctagtccca 327  Q
    |||||||||||| |||||||| ||||| |||||||||||||| ||| ||| |||||||||||||||    
T  14520422 caacaactacaaggttaaacctttttttagaattatacaacccattattaaagaaagctagtccca 14520487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 303
Target Start/End: Original strand, 15566721 - 15566760
Alignment:
Q  264 aacaactacaatgttaaaccctttttcagaattatacaac 303  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  15566721 aacaactacaaggttaaaccctttttcagaattatacaac 15566760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 267 - 323
Target Start/End: Original strand, 5215627 - 5215684
Alignment:
Q  267 aactacaatgttaaaccctttttcagaattatacaac-caattttagagaaagctagt 323  Q
    |||||||| |||||||||||||||| ||||||||||| || | |||||||||||||||    
T  5215627 aactacaaggttaaaccctttttcataattatacaactcattattagagaaagctagt 5215684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 321 - 362
Target Start/End: Complemental strand, 11325279 - 11325238
Alignment:
Q  321 agtcccaatttttcccaattcaatccccaaaactgtttacag 362  Q
    |||||||||||| |||||||||||||||||||||| ||||||    
T  11325279 agtcccaattttccccaattcaatccccaaaactgattacag 11325238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 263 - 327
Target Start/End: Complemental strand, 12917382 - 12917317
Alignment:
Q  263 caacaactacaatgttaaaccctttttcagaattatacaaccaatt-ttagagaaagctagtccca 327  Q
    ||||||| || |||||||||||||||| ||||| |||||||| ||| |||||||||| ||||||||    
T  12917382 caacaacaaccatgttaaacccttttttagaatcatacaacccattattagagaaagttagtccca 12917317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 321 - 362
Target Start/End: Original strand, 13836959 - 13837000
Alignment:
Q  321 agtcccaatttttcccaattcaatccccaaaactgtttacag 362  Q
    |||||||||||| |||||||||||||||||||||| ||||||    
T  13836959 agtcccaattttccccaattcaatccccaaaactgattacag 13837000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 221 - 270
Target Start/End: Complemental strand, 17758714 - 17758665
Alignment:
Q  221 aagtatacatatatacataacttgagcatgtaaattcatcatcaacaact 270  Q
    ||||||||||||| |||||  |||||||||||| ||||||||||||||||    
T  17758714 aagtatacatataaacatatattgagcatgtaatttcatcatcaacaact 17758665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 221 - 270
Target Start/End: Complemental strand, 19060034 - 19059985
Alignment:
Q  221 aagtatacatatatacataacttgagcatgtaaattcatcatcaacaact 270  Q
    ||||||||||||| |||||  |||||||||||| ||||||||||||||||    
T  19060034 aagtatacatataaacatatattgagcatgtaatttcatcatcaacaact 19059985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 361
Target Start/End: Original strand, 10684 - 10722
Alignment:
Q  323 tcccaatttttcccaattcaatccccaaaactgtttaca 361  Q
    |||| ||||| ||||||||||||||||||||||||||||    
T  10684 tccccattttccccaattcaatccccaaaactgtttaca 10722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 327
Target Start/End: Complemental strand, 17669763 - 17669709
Alignment:
Q  274 atgttaaaccctttttcagaattatacaaccaatt-ttagagaaagctagtccca 327  Q
    ||||||||||| |||| ||||| |||||||| ||| |||||||||||||||||||    
T  17669763 atgttaaacccctttttagaatcatacaacccattattagagaaagctagtccca 17669709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 327
Target Start/End: Complemental strand, 54875539 - 54875485
Alignment:
Q  274 atgttaaaccctttttcagaattatacaaccaatt-ttagagaaagctagtccca 327  Q
    ||||||||||| |||| ||||| |||||||| ||| |||||||||||||||||||    
T  54875539 atgttaaacccctttttagaatcatacaacccattattagagaaagctagtccca 54875485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 51
Target Start/End: Original strand, 11563316 - 11563353
Alignment:
Q  14 atataaaacatgacccaaaacattaatttacaaaatca 51  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  11563316 atataaaacttgacccaaaacattaattcacaaaatca 11563353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 362
Target Start/End: Original strand, 15233012 - 15233053
Alignment:
Q  321 agtcccaatttttcccaattcaatccccaaaactgtttacag 362  Q
    |||||||||||| |||||||||||||||||||| | ||||||    
T  15233012 agtcccaattttccccaattcaatccccaaaacagattacag 15233053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 362
Target Start/End: Original strand, 15238880 - 15238921
Alignment:
Q  321 agtcccaatttttcccaattcaatccccaaaactgtttacag 362  Q
    |||||||||||| |||||||||||||||||||| | ||||||    
T  15238880 agtcccaattttccccaattcaatccccaaaacagattacag 15238921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 270
Target Start/End: Complemental strand, 40039036 - 40038987
Alignment:
Q  221 aagtatacatatatacataacttgagcatgtaaattcatcatcaacaact 270  Q
    ||||||||||||| |||||  |||| ||||||| ||||||||||||||||    
T  40039036 aagtatacatataaacatatattgaacatgtaatttcatcatcaacaact 40038987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 375
Target Start/End: Complemental strand, 8927788 - 8927736
Alignment:
Q  323 tcccaatttttcccaattcaatccccaaaactgtttacagcattgctatatga 375  Q
    |||||||||| ||||||||||||| |||||||| ||||| || || |||||||    
T  8927788 tcccaattttccccaattcaatcctcaaaactgattacaacaatgttatatga 8927736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 309; Significance: 1e-174; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 309; E-Value: 1e-174
Query Start/End: Original strand, 14 - 377
Target Start/End: Complemental strand, 38185237 - 38184873
Alignment:
Q  14 atataaaacatgacccaaaacattaatttacaaaatcacacttttcataaaagttctaaagaacagcaaaagttcacttcaagctttatgcttaagatta 113  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||| |||| |||||||||    
T  38185237 atataaaacatgaccaaaaacattaatttacaaaatcacacttttcataaaagttctcaagaacaacaagagttcacttcaagctctatggttaagatta 38185138  T
Q  114 cccaaggtttcaatcatcaaaacaacatctcataacaaaaacaacaactatcagaagtgaattcatcaacatcaacattatacttcaccaattttgagca 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  38185137 cccaaggtttcaatcatcaaaacaacatctcataacaaaaacaacaacaatcagaagtgaattcatcaacaacaacattatacttcaccaattttgagca 38185038  T
Q  214 aaaacacaagtatacatatatacataacttgagcatgtaaattcatcatcaacaactacaatgttaaaccctttttcagaattatacaaccaat-tttag 312  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || |||||    
T  38185037 aaaacacaagtatacatatatacataacttgagcatgtaaattcatcatcaataactacaatgttaaaccctttttcagaattatacaacccatctttag 38184938  T
Q  313 agaaagctagtcccaatttttcccaattcaatccccaaaactgtttacagcattgctatatgatt 377  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  38184937 agaaagctagtcccaatttttcccaattcaatcctcaaaactgtctacagcattgctatatgatt 38184873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 14 - 285
Target Start/End: Complemental strand, 20494825 - 20494554
Alignment:
Q  14 atataaaacatgacccaaaacattaatttacaaaatcacacttttcataaaagttctaaagaacagcaaaagttcacttcaagctttatgcttaagatta 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| |||| |||||||||    
T  20494825 atataaaacatgacccaaaacattaatttacaaaatcacacttttcataaaagttctcaagaacaacaaaagttcacttcaagctctatggttaagatta 20494726  T
Q  114 cccaaggtttcaatcatcaaaacaacatctcataacaaaaacaacaactatcagaagtgaattcatcaacatcaacattatacttcaccaattttgagca 213  Q
    || || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  20494725 cctaatgtttcaatcatcaaaacaacatctcataacaaaaacaacaacaatcagaagtgaattcatcaacaacaatattatacttcaccaattttgagca 20494626  T
Q  214 aaaacacaagtatacatatatacataacttgagcatgtaaattcatcatcaacaactacaatgttaaaccct 285  Q
    ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  20494625 aaaacacaagtttacatatatacataacttgagcatgtaaatttatcatcaacaactacaatgttaaaccct 20494554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 14 - 213
Target Start/End: Complemental strand, 18023846 - 18023647
Alignment:
Q  14 atataaaacatgacccaaaacattaatttacaaaatcacacttttcataaaagttctaaagaacagcaaaagttcacttcaagctttatgcttaagatta 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| |||| |||||||||    
T  18023846 atataaaacatgacccaaaacattaatttacaaaatcacacttttcataaaagttctcaagaacaacaaaagttcacttcaagctctatggttaagatta 18023747  T
Q  114 cccaaggtttcaatcatcaaaacaacatctcataacaaaaacaacaactatcagaagtgaattcatcaacatcaacattatacttcaccaattttgagca 213  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  18023746 cccaaagtttcaatcatcaaaacaacatctcataacaaaaacaataacaatcagaagtgaattcatcaacaacaacattatacttcaccaattttgagca 18023647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 55 - 270
Target Start/End: Original strand, 21514271 - 21514487
Alignment:
Q  55 ttttcataaaagttctaaagaacagcaaaagttcacttcaagctttatgcttaagattacccaaggtttcaatcatcaaaa-caacatctcataacaaaa 153  Q
    |||||||||||||||| ||||||| ||||||||||||||||||| | || ||||||||| ||||||||||||||||||||| ||||||||||||| ||||    
T  21514271 ttttcataaaagttctcaagaacaacaaaagttcacttcaagctctgtggttaagattatccaaggtttcaatcatcaaaaacaacatctcataataaaa 21514370  T
Q  154 acaacaactatcagaagtgaattcatcaacatcaacattatacttcaccaattttgagcaaaaacacaagtatacatatatacataacttgagcatgtaa 253  Q
    |||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  21514371 acaacaacaatcagaagtaaattcatcaacaacaacattatacttcaccaattttgagaaaaaacacaagtatacatatatacataacttgagcatataa 21514470  T
Q  254 attcatcatcaacaact 270  Q
     ||||||||||||||||    
T  21514471 tttcatcatcaacaact 21514487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 72 - 270
Target Start/End: Original strand, 22365990 - 22366186
Alignment:
Q  72 aagaacagcaaaagttcacttcaagctttatgcttaagattacccaaggtttcaatcatcaa-aacaacatctcataacaaaaacaacaactatcagaag 170  Q
    ||||||| || || ||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||  |||| ||  | ||||||||| ||||||||    
T  22365990 aagaacaacacaaattcacttcaagctctatgcctaagattacccaaggtttcaatcatcaacaacaactactcacaatcacaacaacaacaatcagaag 22366089  T
Q  171 tgaattcatcaacatcaacattatacttcaccaattttgagcaaaaacacaagtatacatatatacataacttgagcatgtaaattcatcatcaacaact 270  Q
    ||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22366090 tgaattcatcaaca---acattatacttcaccaattttgagcaaaaacacaagtatacatatatacataacttgagcatgtaaattcatcatcaacaact 22366186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 86 - 270
Target Start/End: Original strand, 22723183 - 22723368
Alignment:
Q  86 ttcacttcaagctttatgcttaagattacccaaggtttcaatcatcaa-aacaacatctcataacaaaaacaacaactatcagaagtgaattcatcaaca 184  Q
    ||||||||||||| |||| |||| |||||||||||||||||||||||| ||| ||  |||| ||  | ||||| ||| ||||||||||||||||||||||    
T  22723183 ttcacttcaagctctatggttaaaattacccaaggtttcaatcatcaacaacgactactcacaatcacaacaaaaacaatcagaagtgaattcatcaaca 22723282  T
Q  185 tcaacattatacttcaccaattttgagcaaaaacacaagtatacatatatacataacttgagcatgtaaattcatcatcaacaact 270  Q
      ||||  |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  22723283 ataacaaaatacttcatcaattttgagcaaaaacacaagtatacatatatacataacttaagcatgtaaattcatcatcaacaact 22723368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 242 - 330
Target Start/End: Complemental strand, 18023653 - 18023564
Alignment:
Q  242 ttgagcatgtaaattcatcatcaacaactacaatgttaaaccctttttcagaattatacaaccaat-tttagagaaagctagtcccaatt 330  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  18023653 ttgagcatgtaaattcatcatcaacaactacaatgttaaaccctttttcagaattatacaacccatctttagagaaagctagtcccaatt 18023564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 186 - 270
Target Start/End: Complemental strand, 4380949 - 4380865
Alignment:
Q  186 caacattatacttcaccaattttgagcaaaaacacaagtatacatatatacataacttgagcatgtaaattcatcatcaacaact 270  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  4380949 caacataatacttcacgaattttgagcaaaaacacaagtatacatatatacataacttgagcatataaattcatcatcaacaact 4380865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 197 - 270
Target Start/End: Complemental strand, 18816624 - 18816551
Alignment:
Q  197 ttcaccaattttgagcaaaaacacaagtatacatatatacataacttgagcatgtaaattcatcatcaacaact 270  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  18816624 ttcaacaattttgagcaaaaacacaagtatacatatatacataacttgagcatataaattcatcatcaacaact 18816551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 72 - 243
Target Start/End: Original strand, 24907801 - 24907986
Alignment:
Q  72 aagaacagcaaaagttcacttcaagctttatgcttaagattacccaaggtttcaatcatcaa-aacaacatctcataacaaaaacaacaactatcagaag 170  Q
    ||||||| || || ||||||||||| | |||| ||||||||||||||||||||||||||||| ||||||  |||||||  | ||||||||| |||| |||    
T  24907801 aagaacaacacaaattcacttcaagttatatggttaagattacccaaggtttcaatcatcaacaacaactactcataatcacaacaacaacaatcaaaag 24907900  T
Q  171 tg-----------aattcatcaacatcaacattatacttcaccaattttgagcaaaaacacaagtat--acatatatacataactt 243  Q
    ||           |||||||||||| ||||||||||||||| |||||||||| ||||||||||||||  |||||||||||||||||    
T  24907901 tgaattcatcaacaattcatcaacaacaacattatacttcatcaattttgagaaaaaacacaagtatacacatatatacataactt 24907986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 263 - 327
Target Start/End: Complemental strand, 18816371 - 18816306
Alignment:
Q  263 caacaactacaatgttaaaccctttttcagaattatacaa-ccaattttagagaaagctagtccca 327  Q
    |||||||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  18816371 caacaactacaaggttaaaccctttttcagaattatacaacccatttttagagaaagctagtccca 18816306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 264 - 327
Target Start/End: Original strand, 22208246 - 22208310
Alignment:
Q  264 aacaactacaatgttaaaccctttttcagaattatacaaccaatt-ttagagaaagctagtccca 327  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  22208246 aacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtccca 22208310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 264 - 327
Target Start/End: Original strand, 22483763 - 22483827
Alignment:
Q  264 aacaactacaatgttaaaccctttttcagaattatacaaccaatt-ttagagaaagctagtccca 327  Q
    |||||| || ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  22483763 aacaacaacgatgttaaaccctttttcagaattatacaacccattattagagaaagctagtccca 22483827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 321 - 379
Target Start/End: Complemental strand, 21860767 - 21860709
Alignment:
Q  321 agtcccaatttttcccaattcaatccccaaaactgtttacagcattgctatatgattat 379  Q
    ||||| |||||| |||||||||||||||||||||| ||||| |||||||||||||||||    
T  21860767 agtccaaattttccccaattcaatccccaaaactgattacaacattgctatatgattat 21860709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 263 - 324
Target Start/End: Complemental strand, 36732488 - 36732426
Alignment:
Q  263 caacaactacaatgttaaaccctttttcagaattatacaaccaatt-ttagagaaagctagtc 324  Q
    |||||||||||| ||||||| ||||||||||||||||||||| ||| ||||||||||||||||    
T  36732488 caacaactacaaggttaaactctttttcagaattatacaacccattattagagaaagctagtc 36732426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 328 - 378
Target Start/End: Complemental strand, 15635322 - 15635271
Alignment:
Q  328 atttttcccaa-ttcaatccccaaaactgtttacagcattgctatatgatta 378  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  15635322 atttttcccaaattcaatccccaaaactgattacagcattgctatatgatta 15635271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 263 - 327
Target Start/End: Original strand, 21514667 - 21514732
Alignment:
Q  263 caacaactacaatgttaaaccctttttcagaattatacaac-caattttagagaaagctagtccca 327  Q
    |||||||||||| |||||||||||||| ||||||||||||| || | ||||||||| |||||||||    
T  21514667 caacaactacaaggttaaaccctttttaagaattatacaactcattattagagaaatctagtccca 21514732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 263 - 303
Target Start/End: Complemental strand, 4380693 - 4380653
Alignment:
Q  263 caacaactacaatgttaaaccctttttcagaattatacaac 303  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  4380693 caacaactacaaggttaaaccctttttcagaattatacaac 4380653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 321 - 362
Target Start/End: Original strand, 20387306 - 20387347
Alignment:
Q  321 agtcccaatttttcccaattcaatccccaaaactgtttacag 362  Q
    |||||||||||| |||||||||||||||||||||| ||||||    
T  20387306 agtcccaattttccccaattcaatccccaaaactgattacag 20387347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 321 - 362
Target Start/End: Original strand, 22617455 - 22617496
Alignment:
Q  321 agtcccaatttttcccaattcaatccccaaaactgtttacag 362  Q
    |||||||||||| |||||||||||||||||||||| ||||||    
T  22617455 agtcccaattttccccaattcaatccccaaaactgattacag 22617496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 324 - 377
Target Start/End: Complemental strand, 22920203 - 22920150
Alignment:
Q  324 cccaatttttcccaattcaatccccaaaactgtttacagcattgctatatgatt 377  Q
    ||||||||| |||||||||||||||||||||| ||||| || || |||||||||    
T  22920203 cccaattttccccaattcaatccccaaaactgattacaacaatgttatatgatt 22920150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 324
Target Start/End: Complemental strand, 22258384 - 22258320
Alignment:
Q  261 atcaacaactacaatgttaaaccctttttcagaattatacaac-caattttagagaaagctagtc 324  Q
    |||||||||| ||| ||||||||||||||  |||||||||||| || | ||||||||||||||||    
T  22258384 atcaacaactgcaaggttaaacccttttttggaattatacaactcattattagagaaagctagtc 22258320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 326
Target Start/End: Original strand, 22483914 - 22483978
Alignment:
Q  263 caacaactacaatgttaaaccctttttcagaattatacaac-caattttagagaaagctagtccc 326  Q
    ||||||| || |||||||||||||||| ||||||||||||| || | |||||||||| |||||||    
T  22483914 caacaacaaccatgttaaaccctttttaagaattatacaactcattattagagaaagttagtccc 22483978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 276 - 327
Target Start/End: Original strand, 12577869 - 12577920
Alignment:
Q  276 gttaaaccctttttcagaattatacaaccaattttagagaaagctagtccca 327  Q
    ||||||||||||||| |||||||||||| | | |||||||||| ||||||||    
T  12577869 gttaaaccctttttcggaattatacaactattattagagaaagttagtccca 12577920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 327
Target Start/End: Original strand, 21399704 - 21399758
Alignment:
Q  274 atgttaaaccctttttcagaattatacaaccaatt-ttagagaaagctagtccca 327  Q
    ||||||||||| |||| ||||| |||||||| ||| |||||||||||||||||||    
T  21399704 atgttaaacccctttttagaatcatacaacccattattagagaaagctagtccca 21399758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 327
Target Start/End: Complemental strand, 21676576 - 21676511
Alignment:
Q  261 atcaacaactacaatgttaaaccctttttcagaattatacaaccaattttagagaaagctagtccca 327  Q
    |||||||||||||| |||||||||| ||||| ||||||| | ||| | |||||| ||||||||||||    
T  21676576 atcaacaactacaaagttaaaccctatttcataattataaacccattattagag-aagctagtccca 21676511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 327
Target Start/End: Complemental strand, 21676669 - 21676604
Alignment:
Q  261 atcaacaactacaatgttaaaccctttttcagaattatacaaccaattttagagaaagctagtccca 327  Q
    |||||||||||||| |||||||||| ||||| ||||||| | ||| | |||||| ||||||||||||    
T  21676669 atcaacaactacaaagttaaaccctatttcataattataaacccattattagag-aagctagtccca 21676604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 327
Target Start/End: Complemental strand, 21678922 - 21678857
Alignment:
Q  261 atcaacaactacaatgttaaaccctttttcagaattatacaaccaattttagagaaagctagtccca 327  Q
    |||||||||||||| |||||||||| ||||| ||||||| | ||| | |||||| ||||||||||||    
T  21678922 atcaacaactacaaagttaaaccctatttcataattataaacccattattagag-aagctagtccca 21678857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 327
Target Start/End: Original strand, 21794197 - 21794251
Alignment:
Q  274 atgttaaaccctttttcagaattatacaaccaatt-ttagagaaagctagtccca 327  Q
    ||||||||||| |||| ||||| |||||||| ||| |||||||||||||||||||    
T  21794197 atgttaaacccctttttagaatcatacaacccattattagagaaagctagtccca 21794251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 327
Target Start/End: Original strand, 22345151 - 22345205
Alignment:
Q  274 atgttaaaccctttttcagaattatacaaccaatt-ttagagaaagctagtccca 327  Q
    ||||||||||| ||||| |||| |||||||| ||| |||||||||||||||||||    
T  22345151 atgttaaaccccttttcggaatcatacaacccattattagagaaagctagtccca 22345205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 327
Target Start/End: Original strand, 22356811 - 22356865
Alignment:
Q  274 atgttaaaccctttttcagaattatacaaccaatt-ttagagaaagctagtccca 327  Q
    ||||||||||| ||||| |||| |||||||| ||| |||||||||||||||||||    
T  22356811 atgttaaaccccttttcggaatcatacaacccattattagagaaagctagtccca 22356865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 51
Target Start/End: Complemental strand, 18816681 - 18816644
Alignment:
Q  14 atataaaacatgacccaaaacattaatttacaaaatca 51  Q
    ||||||||| ||||||||||||||| ||||||||||||    
T  18816681 atataaaacttgacccaaaacattagtttacaaaatca 18816644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 270
Target Start/End: Original strand, 24239756 - 24239805
Alignment:
Q  221 aagtatacatatatacataacttgagcatgtaaattcatcatcaacaact 270  Q
    ||||||||||||| |||||  |||||||||||| ||||||||||| ||||    
T  24239756 aagtatacatataaacatatattgagcatgtaatttcatcatcaagaact 24239805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 324
Target Start/End: Original strand, 36305974 - 36306035
Alignment:
Q  263 caacaactacaatgttaaaccctttttcagaattatacaaccaattttagagaaagctagtc 324  Q
    ||||||| || || ||||| ||||||||||||| ||||||||  | ||||||||||||||||    
T  36305974 caacaacaaccattttaaaacctttttcagaatcatacaaccgttattagagaaagctagtc 36306035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 326
Target Start/End: Original strand, 23884158 - 23884209
Alignment:
Q  274 atgttaaaccctttttcagaattatacaaccaattttagagaaagctagtccc 326  Q
    ||||||||||| |||| ||||| |||||||| | |||||||||||||||||||    
T  23884158 atgttaaacccctttttagaatcatacaaccca-tttagagaaagctagtccc 23884209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 307; Significance: 1e-173; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 307; E-Value: 1e-173
Query Start/End: Original strand, 14 - 379
Target Start/End: Original strand, 34958072 - 34958438
Alignment:
Q  14 atataaaacatgacccaaaacattaatttacaaaatcacacttttcataaaagttctaaagaacagcaaaagttcacttcaagctttatgcttaagatta 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| |||| |||||||||    
T  34958072 atataaaacatgacccaaaacattaatttacaaaatcacacttttcataaaagttctcaagaacaacaaaagttcacttcaagctctatggttaagatta 34958171  T
Q  114 cccaaggtttcaatcatcaaaacaacatctcataacaaaaacaacaactatcagaagtgaattcatcaacatcaacattatacttcaccaattttgagca 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  34958172 cccaaggtttcaatcatcaaaacaacatctcataacaaaaacaacaacaatcaaaagtgaattcatcaacaacaacattatacttcaccaattttgagca 34958271  T
Q  214 aaaacacaagtatacatatatacataacttgagcatgtaaattcatcatcaacaactacaatgttaaaccctttttcagaattatacaac-caattttag 312  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||  |||||    
T  34958272 aaaacacaagtatacatatatatctaacttgagcatgtaaattcatcatcaacaactacaatgttaaatcctttttcagaattatacaactcatctttag 34958371  T
Q  313 agaaagctagtcccaatttttcccaattcaatccccaaaactgtttacagcattgctatatgattat 379  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  34958372 agaaagctagtcccaatttttcccaatttaatccccaaaactgtttacagcattgctatatgattat 34958438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 14 - 379
Target Start/End: Complemental strand, 832174 - 831809
Alignment:
Q  14 atataaaacatgacccaaaacattaatttacaaaatcacacttttcataaaagttctaaagaacagcaaaagttcacttcaagctttatgcttaagatta 113  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| |||| |||||||||    
T  832174 atataaaacatgacccaaaatattaatttacaaaatcacacttttcataaaagttctcaagaacaacaaaagttcacttcaagctctatggttaagatta 832075  T
Q  114 cccaaggtttcaatcatcaaaacaacatctcataacaaaaacaacaactatcagaagtgaattcatcaacatcaacattatacttcaccaattttgagca 213  Q
     | ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| |||||||||     
T  832074 tctaaggtttcaatcatcaaaacaacatctcataacaaaaacaacaacaatcagaagtgaattcatcaacaacaacattatacttcacccattttgagc- 831976  T
Q  214 aaaacacaagtatacatatatacataacttgagcatgtaaattcatcatcaacaactacaatgttaaaccctttttcagaattatacaaccaat-tttag 312  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| || |||||    
T  831975 aaaacacaagtatacatatatacataacttgagcatgtaaattcatcatcaacaactacaatgttaaacccttttttagaattgtacaacccatctttag 831876  T
Q  313 agaaagctagtcccaatttttcccaattcaatccccaaaactgtttacagcattgctatatgattat 379  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  831875 agaaaactagtcccaatttttcccaattcaatccccaaaactttttacagcattgctatatgattat 831809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 14 - 379
Target Start/End: Complemental strand, 1197354 - 1196989
Alignment:
Q  14 atataaaacatgacccaaaacattaatttacaaaatcacacttttcataaaagttctaaagaacagcaaaagttcacttcaagctttatgcttaagatta 113  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| |||| |||||||||    
T  1197354 atataaaacatgacccaaaatattaatttacaaaatcacacttttcataaaagttctcaagaacaacaaaagttcacttcaagctctatggttaagatta 1197255  T
Q  114 cccaaggtttcaatcatcaaaacaacatctcataacaaaaacaacaactatcagaagtgaattcatcaacatcaacattatacttcaccaattttgagca 213  Q
     | ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| |||||||||     
T  1197254 tctaaggtttcaatcatcaaaacaacatctcataacaaaaacaacaacaatcagaagtgaattcatcaacaacaacattatacttcacccattttgagc- 1197156  T
Q  214 aaaacacaagtatacatatatacataacttgagcatgtaaattcatcatcaacaactacaatgttaaaccctttttcagaattatacaaccaat-tttag 312  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| || |||||    
T  1197155 aaaacacaagtatacatatatacataacttgagcatgtaaattcatcatcaacaactacaatgttaaacccttttttagaattgtacaacccatctttag 1197056  T
Q  313 agaaagctagtcccaatttttcccaattcaatccccaaaactgtttacagcattgctatatgattat 379  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  1197055 agaaaactagtcccaatttttcccaattcaatccccaaaactttttacagcattgctatatgattat 1196989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 55 - 270
Target Start/End: Original strand, 47095032 - 47095248
Alignment:
Q  55 ttttcataaaagttctaaagaacagcaaaagttcacttcaagctttatgcttaagattacccaaggtttcaatcatcaaaa-caacatctcataacaaaa 153  Q
    |||||| ||||||||| ||||||| ||||| |||||||||||||||||| ||||||||||| |||||||||||||| |||| |||||||| |||||||||    
T  47095032 ttttcacaaaagttctcaagaacaacaaaaattcacttcaagctttatggttaagattaccgaaggtttcaatcattaaaaacaacatcttataacaaaa 47095131  T
Q  154 acaacaactatcagaagtgaattcatcaacatcaacattatacttcaccaattttgagcaaaaacacaagtatacatatatacataacttgagcatgtaa 253  Q
    |||||||| || ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  47095132 acaacaacaattagaagtgaattcatcaacaacaacattatacttcaccaattttgagcaaaaacacaagtatacatatatacataacttgagcatataa 47095231  T
Q  254 attcatcatcaacaact 270  Q
    |||||||||||||||||    
T  47095232 attcatcatcaacaact 47095248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 125 - 270
Target Start/End: Complemental strand, 4691064 - 4690917
Alignment:
Q  125 aatcatcaaaa--caacatctcataacaaaaacaacaactatcagaagtgaattcatcaacatcaacattatacttcaccaattttgagcaaaaacacaa 222  Q
    |||||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  4691064 aatcatcaaaagacaacatctcataacaaaaacaacaacaatcagaagtgaattcatcaacaacaacattatacttcaccaattttgagcaaaaatacaa 4690965  T
Q  223 gtatacatatatacataacttgagcatgtaaattcatcatcaacaact 270  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  4690964 gtatacatatatacataacttgagcatgtaaattcatcatcaacaact 4690917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 72 - 270
Target Start/End: Complemental strand, 18079753 - 18079554
Alignment:
Q  72 aagaacagcaaaagttcacttcaagctttatgcttaagattacccaaggtttcaatcatcaa-aacaacatctcataacaaaaacaacaactatcagaag 170  Q
    ||||||| || || ||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||   | | ||  | ||||||||| ||||||||    
T  18079753 aagaacaacacaaattcacttcaagctctatggttaagattacccaaggtttcaatcatcaacaacaactatttacaatcacaacaacaacaatcagaag 18079654  T
Q  171 tgaattcatcaacatcaacattatacttcaccaattttgagcaaaaacacaagtatacatatatacataacttgagcatgtaaattcatcatcaacaact 270  Q
    ||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18079653 tgaattcatcaacaataacattatatttcaccaattttgagcaaaaacacaagtatacatatatacataacttgagcatgtaaattcatcatcaacaact 18079554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 132 - 270
Target Start/End: Original strand, 43745314 - 43745452
Alignment:
Q  132 aaaacaacatctcataacaaaaacaacaactatcagaagtgaattcatcaacatcaacattatacttcaccaattttgagcaaaaacacaagtatacata 231  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  43745314 aaaacaacatctcataacaaaaacaacaacaatcagaagtgaattcatcaacaacaacattatacttcaccaattttgagcaaaaactcaagtatacata 43745413  T
Q  232 tatacataacttgagcatgtaaattcatcatcaacaact 270  Q
    |||||||||||||| ||| ||||||||||||||||||||    
T  43745414 tatacataacttgaccatataaattcatcatcaacaact 43745452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 186 - 267
Target Start/End: Complemental strand, 20252527 - 20252446
Alignment:
Q  186 caacattatacttcaccaattttgagcaaaaacacaagtatacatatatacataacttgagcatgtaaattcatcatcaaca 267  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  20252527 caacatcatacttcaccaattttgagcaaaaacacaagtatacatatatacataacttgagcatataaattcatcatcaaca 20252446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 16 - 127
Target Start/End: Original strand, 14259204 - 14259316
Alignment:
Q  16 ataaaacatgacccaaaacattaatttacaaaa-tcacacttttcataaaagttctaaagaacagcaaaagttcacttcaagctttatgcttaagattac 114  Q
    |||||| ||||||||||| |||| ||||||||| ||||| |||||||||||||||| ||||||| ||||||||||||||||||| |||| ||||||||||    
T  14259204 ataaaagatgacccaaaatattattttacaaaaatcacatttttcataaaagttcttaagaacaacaaaagttcacttcaagctctatggttaagattac 14259303  T
Q  115 ccaaggtttcaat 127  Q
    |||||||||||||    
T  14259304 ccaaggtttcaat 14259316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 14928532 - 14928417
Alignment:
Q  16 ataaaacatgacccaaaacattaatttacaaaa-tcacacttttcataaaagttctaaagaacagcaaaagttcacttcaagctttatgcttaagattac 114  Q
    |||||| |||||||||||||||| ||||||||| ||||| |||||||||||||||| ||||| | ||||||||||||||||| | |||| ||||||||||    
T  14928532 ataaaagatgacccaaaacattattttacaaaaatcacatttttcataaaagttctcaagaataacaaaagttcacttcaagttctatggttaagattac 14928433  T
Q  115 ccaaggtttcaatcat 130  Q
    ||||||||||||||||    
T  14928432 ccaaggtttcaatcat 14928417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 15351998 - 15351883
Alignment:
Q  16 ataaaacatgacccaaaacattaatttacaaaa-tcacacttttcataaaagttctaaagaacagcaaaagttcacttcaagctttatgcttaagattac 114  Q
    |||||| |||||||||||||||| ||||||||| ||||| |||||||||||||||| ||||| | ||||||||||||||||| | |||| ||||||||||    
T  15351998 ataaaagatgacccaaaacattattttacaaaaatcacatttttcataaaagttctcaagaataacaaaagttcacttcaagttctatggttaagattac 15351899  T
Q  115 ccaaggtttcaatcat 130  Q
    ||||||||||||||||    
T  15351898 ccaaggtttcaatcat 15351883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 186 - 270
Target Start/End: Complemental strand, 15575989 - 15575905
Alignment:
Q  186 caacattatacttcaccaattttgagcaaaaacacaagtatacatatatacataacttgagcatgtaaattcatcatcaacaact 270  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  15575989 caacatcatacttcacgaattttgagcaaaaacacaagtatacatatatacataacttgagcagataaattcatcatcaacaact 15575905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 186 - 265
Target Start/End: Complemental strand, 18875001 - 18874922
Alignment:
Q  186 caacattatacttcaccaattttgagcaaaaacacaagtatacatatatacataacttgagcatgtaaattcatcatcaa 265  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  18875001 caacatcatacttcaccaattttgagcaaaaatacaagtatacatatatacataacttgagcatataaattcatcatcaa 18874922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 32302035 - 32302150
Alignment:
Q  16 ataaaacatgacccaaaacattaatttacaaaa-tcacacttttcataaaagttctaaagaacagcaaaagttcacttcaagctttatgcttaagattac 114  Q
    |||||| ||||||||||| |||| ||||||||| ||||| |||||||||||||||| ||||| | ||||||||||||||||||| | || ||||||||||    
T  32302035 ataaaagatgacccaaaatattattttacaaaactcacatttttcataaaagttctcaagaataacaaaagttcacttcaagctctgtggttaagattac 32302134  T
Q  115 ccaaggtttcaatcat 130  Q
    ||||||||||||||||    
T  32302135 ccaaggtttcaatcat 32302150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 132 - 270
Target Start/End: Complemental strand, 48213107 - 48212984
Alignment:
Q  132 aaaacaacatctcataacaaaaacaacaactatcagaagtgaattcatcaacatcaacattatacttcaccaattttgagcaaaaacacaagtatacata 231  Q
    |||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||||||||||||| ||||||||||               |||||    
T  48213107 aaaacaacatctcataacaaaaacaacaacaattagaagtgaattcatcaacaacaacattatacttcatcaattttgag---------------acata 48213023  T
Q  232 tatacataacttgagcatgtaaattcatcatcaacaact 270  Q
    |||| ||||||||||||| ||||||||||||||||||||    
T  48213022 tatatataacttgagcatataaattcatcatcaacaact 48212984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 321 - 379
Target Start/End: Complemental strand, 14153108 - 14153050
Alignment:
Q  321 agtcccaatttttcccaattcaatccccaaaactgtttacagcattgctatatgattat 379  Q
    |||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  14153108 agtcccaattttccccaattcaatccccaaaactgattacagcattgctatatgattat 14153050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 321 - 379
Target Start/End: Complemental strand, 37727074 - 37727016
Alignment:
Q  321 agtcccaatttttcccaattcaatccccaaaactgtttacagcattgctatatgattat 379  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  37727074 agtcccaattttttccaattcaatccccaaaactgtttacaacattgctatatgattat 37727016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 266 - 327
Target Start/End: Complemental strand, 708502 - 708440
Alignment:
Q  266 caactacaatgttaaaccctttttcagaattatacaaccaatt-ttagagaaagctagtccca 327  Q
    ||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  708502 caactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtccca 708440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 20252257 - 20252195
Alignment:
Q  264 aacaactacaatgttaaaccctttttcagaattatacaac-caattttagagaaagctagtcc 325  Q
    |||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||||    
T  20252257 aacaactacaatgttaaaccctttttcagaattatacaactcattattagagaaagctagtcc 20252195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 263 - 327
Target Start/End: Complemental strand, 15575725 - 15575660
Alignment:
Q  263 caacaactacaatgttaaaccctttttcagaattatacaaccaatt-ttagagaaagctagtccca 327  Q
    |||||| ||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  15575725 caacaagtacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtccca 15575660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 321 - 379
Target Start/End: Original strand, 42041987 - 42042045
Alignment:
Q  321 agtcccaatttttcccaattcaatccccaaaactgtttacagcattgctatatgattat 379  Q
    |||||||||||| || ||||||||||||||||||| ||||| |||||||||||||||||    
T  42041987 agtcccaattttccctaattcaatccccaaaactgattacaacattgctatatgattat 42042045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 263 - 327
Target Start/End: Original strand, 43745632 - 43745697
Alignment:
Q  263 caacaactacaatgttaaaccctttttcagaattatacaac-caattttagagaaagctagtccca 327  Q
    |||||||||||| |||||||||||||||| ||||||||||| || | |||||||||||||||||||    
T  43745632 caacaactacaaggttaaaccctttttcataattatacaactcattattagagaaagctagtccca 43745697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 263 - 327
Target Start/End: Original strand, 47095428 - 47095493
Alignment:
Q  263 caacaactacaatgttaaaccctttttcagaattatacaaccaatt-ttagagaaagctagtccca 327  Q
    |||||||||||| |||||||| |||||||||||||| ||||| ||| |||||||||||||||||||    
T  47095428 caacaactacaaggttaaaccatttttcagaattattcaacccattattagagaaagctagtccca 47095493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 264 - 327
Target Start/End: Complemental strand, 8513828 - 8513764
Alignment:
Q  264 aacaactacaatgttaaaccctttttcagaattatacaaccaatt-ttagagaaagctagtccca 327  Q
    ||||||||||| |||||||||||||| |||||||||||||| ||| |||||||||| ||||||||    
T  8513828 aacaactacaaggttaaacccttttttagaattatacaacccattattagagaaagttagtccca 8513764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 277 - 327
Target Start/End: Original strand, 38299738 - 38299789
Alignment:
Q  277 ttaaaccctttttcagaattatacaaccaatt-ttagagaaagctagtccca 327  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  38299738 ttaaaccctttttcagaattatacaacccattattagagaaagctagtccca 38299789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 263 - 327
Target Start/End: Original strand, 19195588 - 19195652
Alignment:
Q  263 caacaactacaatgttaaaccctttttcagaattatacaac-caattttagagaaagctagtccca 327  Q
    |||||||||||| ||||||||| |||||||||||||||||| || | |||||||||||||||||||    
T  19195588 caacaactacaaggttaaaccc-ttttcagaattatacaactcattattagagaaagctagtccca 19195652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 264 - 327
Target Start/End: Complemental strand, 8488169 - 8488105
Alignment:
Q  264 aacaactacaatgttaaaccctttttcagaattatacaaccaatt-ttagagaaagctagtccca 327  Q
    |||||||| || |||||||||||||| |||||||||||||| ||| |||||||||| ||||||||    
T  8488169 aacaactataaggttaaacccttttttagaattatacaacccattattagagaaagttagtccca 8488105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 303
Target Start/End: Complemental strand, 4690738 - 4690699
Alignment:
Q  264 aacaactacaatgttaaaccctttttcagaattatacaac 303  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  4690738 aacaactacaaggttaaaccctttttcagaattatacaac 4690699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 323 - 362
Target Start/End: Complemental strand, 12201314 - 12201275
Alignment:
Q  323 tcccaatttttcccaattcaatccccaaaactgtttacag 362  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  12201314 tcccaatttttcccaattcaatccccaaaactgattacag 12201275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 266 - 324
Target Start/End: Complemental strand, 18874740 - 18874679
Alignment:
Q  266 caactacaatgttaaaccc--tttttcagaattatacaaccaatt-ttagagaaagctagtc 324  Q
    ||||||||| |||||||||  |||||||||||||||||||| ||| ||||||||||||||||    
T  18874740 caactacaaggttaaaccccttttttcagaattatacaacccattattagagaaagctagtc 18874679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 173 - 253
Target Start/End: Complemental strand, 3192230 - 3192149
Alignment:
Q  173 aattcatcaacatcaacattatacttcaccaattttgagcaaaaacac-aagtatacatatatacataacttgagcatgtaa 253  Q
    |||||||||||| |||||||||  |||| |||||||||   ||||||| ||||||||||||| ||| | |||||||||||||    
T  3192230 aattcatcaacaacaacattatttttcatcaattttgaatgaaaacacaaagtatacatatacacacatcttgagcatgtaa 3192149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 229 - 270
Target Start/End: Original strand, 19070012 - 19070053
Alignment:
Q  229 atatatacataacttgagcatgtaaattcatcatcaacaact 270  Q
    ||||||| ||||||||||||||||| ||||||||||||||||    
T  19070012 atatatatataacttgagcatgtaatttcatcatcaacaact 19070053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 38295239 - 38295280
Alignment:
Q  18 aaaacatgacccaaaacattaatttacaaaatcacacttttc 59  Q
    ||||||||||||||||||||| |||||||||||||| |||||    
T  38295239 aaaacatgacccaaaacattattttacaaaatcacatttttc 38295280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 321 - 361
Target Start/End: Complemental strand, 12207921 - 12207881
Alignment:
Q  321 agtcccaatttttcccaattcaatccccaaaactgtttaca 361  Q
    |||||||||||| |||||||||||||||||||||| |||||    
T  12207921 agtcccaattttccccaattcaatccccaaaactgattaca 12207881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 323 - 379
Target Start/End: Original strand, 15726150 - 15726206
Alignment:
Q  323 tcccaatttttcccaattcaatccccaaaactgtttacagcattgctatatgattat 379  Q
    |||||||||| |||||||||||||||||||||| ||||| || || || ||||||||    
T  15726150 tcccaattttccccaattcaatccccaaaactgattacaacaatgttacatgattat 15726206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 327
Target Start/End: Complemental strand, 43276818 - 43276755
Alignment:
Q  264 aacaactacaatgttaaaccctttttcagaattatacaaccaatt-ttagagaaagctagtccca 327  Q
    ||||||||||| |||||||| |||| ||||||||||||||| ||| |||||||||| ||||||||    
T  43276818 aacaactacaaggttaaaccatttt-cagaattatacaacccattattagagaaagttagtccca 43276755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 323 - 362
Target Start/End: Original strand, 1613378 - 1613417
Alignment:
Q  323 tcccaatttttcccaattcaatccccaaaactgtttacag 362  Q
    |||| |||||||||||||||||||||||||| ||||||||    
T  1613378 tccccatttttcccaattcaatccccaaaacagtttacag 1613417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 327
Target Start/End: Complemental strand, 58478 - 58424
Alignment:
Q  274 atgttaaaccctttttcagaattatacaaccaatt-ttagagaaagctagtccca 327  Q
    ||||||||||| |||| ||||| |||||||| ||| |||||||||||||||||||    
T  58478 atgttaaacccctttttagaatcatacaacccattattagagaaagctagtccca 58424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 327
Target Start/End: Complemental strand, 16250287 - 16250233
Alignment:
Q  274 atgttaaaccctttttcagaattatacaac-caattttagagaaagctagtccca 327  Q
    |||||||||||||||||| ||||||||||| || | |||||||||| ||||||||    
T  16250287 atgttaaaccctttttcaaaattatacaactcattattagagaaagttagtccca 16250233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 270
Target Start/End: Complemental strand, 16368525 - 16368427
Alignment:
Q  173 aattcatcaacatcaacattatacttcaccaattttgagcaaaaacac-aagtatacatatatacataacttgagcatgtaaattcatcatcaacaact 270  Q
    |||||||||||| |||| ||||| |||| ||||||||||  ||||||| |||||||||| |||| | |  | ||| |||||| ||||||||||| ||||    
T  16368525 aattcatcaacaacaacgttatatttcatcaattttgagtgaaaacacaaagtatacatgtatatacatatagagtatgtaatttcatcatcaataact 16368427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 327
Target Start/End: Complemental strand, 33556170 - 33556116
Alignment:
Q  274 atgttaaaccctttttcagaattatacaaccaatt-ttagagaaagctagtccca 327  Q
    ||||||||||| |||| ||||| |||||||| ||| |||||||||||||||||||    
T  33556170 atgttaaacccctttttagaatcatacaacccattattagagaaagctagtccca 33556116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 299
Target Start/End: Complemental strand, 42565910 - 42565872
Alignment:
Q  261 atcaacaactacaatgttaaaccctttttcagaattata 299  Q
    ||||||||||||||  |||||||||||||||||||||||    
T  42565910 atcaacaactacaagattaaaccctttttcagaattata 42565872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 362
Target Start/End: Original strand, 7529952 - 7529989
Alignment:
Q  325 ccaatttttcccaattcaatccccaaaactgtttacag 362  Q
    |||||||| |||||||||||||||||||||| ||||||    
T  7529952 ccaattttccccaattcaatccccaaaactgattacag 7529989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 270
Target Start/End: Original strand, 16383825 - 16383874
Alignment:
Q  221 aagtatacatatatacataacttgagcatgtaaattcatcatcaacaact 270  Q
    ||||||||||||| | |||  |||||||||||| ||||||||||||||||    
T  16383825 aagtatacatataaaaatatattgagcatgtaatttcatcatcaacaact 16383874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 324
Target Start/End: Original strand, 19283030 - 19283094
Alignment:
Q  263 caacaactacaatgttaaaccc--tttttcagaattatacaaccaatt-ttagagaaagctagtc 324  Q
    ||||||| || |||||||||||  |||||||||||||||||||| ||| |||||||||| |||||    
T  19283030 caacaacaaccatgttaaaccccctttttcagaattatacaacccattcttagagaaagttagtc 19283094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 362
Target Start/End: Complemental strand, 39995087 - 39995046
Alignment:
Q  321 agtcccaatttttcccaattcaatccccaaaactgtttacag 362  Q
    |||||||||||| ||||||||||||||||||| || ||||||    
T  39995087 agtcccaattttccccaattcaatccccaaaattgattacag 39995046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 321 - 361
Target Start/End: Complemental strand, 15731106 - 15731066
Alignment:
Q  321 agtcccaatttttcccaattcaatccccaaaactgtttaca 361  Q
    |||||||||||| ||||||||||| |||||||||| |||||    
T  15731106 agtcccaattttccccaattcaattcccaaaactgattaca 15731066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 299; Significance: 1e-168; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 14 - 379
Target Start/End: Complemental strand, 15748097 - 15747732
Alignment:
Q  14 atataaaacatgacccaaaacattaatttacaaaatcacacttttcataaaagttctaaagaacagcaaaagttcacttcaagctttatgcttaagatta 113  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| |||| |||||||||    
T  15748097 atataaaacatgaccgaaaacattaatttacaaaatcacacttttcataaaagttctcaagaacaacaaaagttcacttcaagctctatggttaagatta 15747998  T
Q  114 cccaaggtttcaatcatcaaaacaacatctcataacaaaaacaacaactatcagaagtgaattcatcaacatcaacattatacttcaccaattttgagca 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||     
T  15747997 cccaaggtttcaatcatcaaaacaacatctcataacaaaaacaacaacaatcagaagtgaagtcatcaacatcaacattatacttcaccaattttgagc- 15747899  T
Q  214 aaaacacaagtatacatatatacataacttgagcatgtaaattcatcatcaacaactacaatgttaaaccctttttcagaattatacaac-caattttag 312  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||    
T  15747898 aaaacacaagtatacatatatacataacttgagcatgtatattcatcatcaacaactacaatgttaaaccctttttcagaattatacaactcatctttag 15747799  T
Q  313 agaaagctagtcccaatttttcccaattcaatccccaaaactgtttacagcattgctatatgattat 379  Q
    |||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  15747798 agaaagttagtctcaatttttcccaatttaatccccaaaactgtttacagcattgctatatgattat 15747732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 14 - 379
Target Start/End: Original strand, 17142754 - 17143115
Alignment:
Q  14 atataaaacatgacccaaaacattaatttacaaaatcacacttttcataaaagttctaaagaacagcaaaagttcacttcaagctttatgcttaagatta 113  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||  ||||| ||||||| |||  |||||||||||||| |||| |||||||||    
T  17142754 atataaaacatgacccaaaacattaatttacaaaatcacatttttcataa--gttctcaagaacaacaaccgttcacttcaagctctatgattaagatta 17142851  T
Q  114 cccaaggtttcaatcatcaaaacaacatctcataacaaaaacaacaactatcagaagtgaattcatcaacatcaacattatacttcaccaattttgagca 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||   ||||||||||||||||||||||||||    
T  17142852 cccaaggtttcaatcatcaaaacaacatctcataacaaaaacaacaacaatcagaagtgagttcatcaaca---acattatacttcaccaattttgagca 17142948  T
Q  214 aaaacacaagtatacatatatacataacttgagcatgtaaattcatcatcaacaactacaatgttaaaccctttttcagaattatacaac-caattttag 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||  |||||    
T  17142949 aaaacacaagtatacatatatacataacttgagcatgtaaattcatcatcaacaactacaatgttaaaccccttttcagaattatacaactcatctttag 17143048  T
Q  313 agaaagctagtcccaatttttcccaattcaatccccaaaactgtttacagcattgctatatgattat 379  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  17143049 agaaagctattcccaatttttcccaattcaatccccaaaactatttacagcattgctatatgattat 17143115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 14 - 270
Target Start/End: Original strand, 14630676 - 14630933
Alignment:
Q  14 atataaaacatgacccaaaacattaatttacaaaa-tcacacttttcataaaagttctaaagaacagcaaaagttcacttcaagctttatgcttaagatt 112  Q
    ||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||||| | ||||| |||||||||| |||||||| |||| ||||||||    
T  14630676 atataaaacatgacccaaaacattattttacaaaaatcacatttttcataaaagttctcaggaacaacaaaagttcaattcaagctctatggttaagatt 14630775  T
Q  113 acccaaggtttcaatcatcaaaa-caacatctcataacaaaaacaacaactatcagaagtgaattcatcaacatcaacattatacttcaccaattttgag 211  Q
    | ||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||| |||||||||||||||| |||||||||    
T  14630776 atccaaggtttcaatcatcaaaaacaacatctcataacaaaa-caacaacgatcagaagtgaattcatcaacaacaacattatacttcacaaattttgag 14630874  T
Q  212 caaaaacacaagtatacatatatacataacttgagcatgtaaattcatcatcaacaact 270  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  14630875 caaaaacacaagtatacatatatacatatcttgagcatgtaaattcatcatcagcaact 14630933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 55 - 270
Target Start/End: Original strand, 26445787 - 26446003
Alignment:
Q  55 ttttcataaaagttctaaagaacagcaaaagttcacttcaagctttatgcttaagattacccaaggtttcaatcatcaaaa-caacatctcataacaaaa 153  Q
    |||||||||||||||| ||||||| ||||||||||||||||||| |||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  26445787 ttttcataaaagttctcaagaacaacaaaagttcacttcaagctctatggttaagattacccaaggttttaatcatcaaaaacaacatctcataacaaaa 26445886  T
Q  154 acaacaactatcagaagtgaattcatcaacatcaacattatacttcaccaattttgagcaaaaacacaagtatacatatatacataacttgagcatgtaa 253  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||    
T  26445887 acaacaacaatcagaagtgaattcatcaacaacaacattatacttcaccaattttgagcaaaaacacaagtatacttatatacataacttgagaatataa 26445986  T
Q  254 attcatcatcaacaact 270  Q
    |||||||||||||||||    
T  26445987 attcatcatcaacaact 26446003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 14 - 227
Target Start/End: Complemental strand, 16026131 - 16025917
Alignment:
Q  14 atataaaacatgacccaaaacattaatttacaaaa-tcacacttttcataaaagttctaaagaacagcaaaagttcacttcaagctttatgcttaagatt 112  Q
    |||||||| || ||||||||||||| |||| |||| ||||| |||||||||||||||| ||||||| ||||||||||||||||||| |||| ||||||||    
T  16026131 atataaaagattacccaaaacattattttataaaaatcacatttttcataaaagttcttaagaacaacaaaagttcacttcaagctctatggttaagatt 16026032  T
Q  113 acccaaggtttcaatcatc-aaaacaacatctcataacaaaaacaacaactatcagaagtgaattcatcaacatcaacattatacttcaccaattttgag 211  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||||||    
T  16026031 acccaaggtttcaatcatcaaaaacaacatctcataac-aaaacaacaacaattagaagtgaattcatcaacaacaacattatacttcaccaattttgag 16025933  T
Q  212 caaaaacacaagtata 227  Q
    ||||||||||||||||    
T  16025932 caaaaacacaagtata 16025917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 132 - 270
Target Start/End: Complemental strand, 2424781 - 2424643
Alignment:
Q  132 aaaacaacatctcataacaaaaacaacaactatcagaagtgaattcatcaacatcaacattatacttcaccaattttgagcaaaaacacaagtatacata 231  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  2424781 aaaacaacatctcataacaaaaacaataacaatcagaagtgaattcatcaacaacaacattatacttcaccaattttgagcaaaaacacaagtatacata 2424682  T
Q  232 tatacataacttgagcatgtaaattcatcatcaacaact 270  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  2424681 tatacataacttgagcatataaattcatcatcaacaact 2424643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 87 - 270
Target Start/End: Complemental strand, 10237521 - 10237326
Alignment:
Q  87 tcacttcaagctttatgcttaagattacccaaggtttcaatcatcaa-aacaacatctcataacaaaaacaacaactatcagaagtgaattcatcaaca- 184  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||| ||||||  |||| ||  | ||||||||| ||||||||||||||||||||||     
T  10237521 tcacttcaagctctatggttaagattacccaaggtttcaatcatcaacaacaactactcacaatcacaacaacaacaatcagaagtgaattcatcaacaa 10237422  T
Q  185 -tca---------acattatacttcaccaattttgagcaaaaacacaagtatacatatatacataacttgagcatgtaaattcatcatcaacaact 270  Q
     |||         ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  10237421 ttcaccaacaataacattatacttcatcaattttgagcaaaaacacaagtatacatatatacataacttgagcatgtaaattcttcatcaacaact 10237326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 15011711 - 15011598
Alignment:
Q  18 aaaacatgacccaaaacattaatttacaaaa-tcacacttttcataaaagttctaaagaacagcaaaagttcacttcaagctttatgcttaagattaccc 116  Q
    |||| |||| ||||||||||| ||||||||| ||||| |||||||||||||||| ||||||| ||||||||||||||||||| |||| ||||||||||||    
T  15011711 aaaagatgatccaaaacattattttacaaaaatcacatttttcataaaagttctcaagaacaacaaaagttcacttcaagctctatggttaagattaccc 15011612  T
Q  117 aaggtttcaatcat 130  Q
    ||||||||||||||    
T  15011611 aaggtttcaatcat 15011598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 321 - 379
Target Start/End: Original strand, 14035562 - 14035620
Alignment:
Q  321 agtcccaatttttcccaattcaatccccaaaactgtttacagcattgctatatgattat 379  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  14035562 agtcccaatttttctcaattcaatccccaaaactgtttacaacattgctatatgattat 14035620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 263 - 327
Target Start/End: Original strand, 25513827 - 25513892
Alignment:
Q  263 caacaactacaatgttaaaccctttttcagaattatacaac-caattttagagaaagctagtccca 327  Q
    ||||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||    
T  25513827 caacaactacaatgttaaaccctttttcagaattatacaactcattattagagaaagctagtccca 25513892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 148 - 207
Target Start/End: Original strand, 25513653 - 25513712
Alignment:
Q  148 acaaaaacaacaactatcagaagtgaattcatcaacatcaacattatacttcaccaattt 207  Q
    |||||||||||| | |||||||||||||||||||||| ||||||||||||||||||||||    
T  25513653 acaaaaacaacatcaatcagaagtgaattcatcaacaacaacattatacttcaccaattt 25513712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 263 - 324
Target Start/End: Original strand, 14631111 - 14631173
Alignment:
Q  263 caacaactacaatgttaaaccctttttcagaattatacaaccaatt-ttagagaaagctagtc 324  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  14631111 caacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtc 14631173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 321 - 378
Target Start/End: Original strand, 30147760 - 30147817
Alignment:
Q  321 agtcccaatttttcccaattcaatccccaaaactgtttacagcattgctatatgatta 378  Q
    |||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||    
T  30147760 agtcccaattttccccaattcaatccccaaaactgattacatcattgctatatgatta 30147817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 323 - 379
Target Start/End: Original strand, 14049425 - 14049481
Alignment:
Q  323 tcccaatttttcccaattcaatccccaaaactgtttacagcattgctatatgattat 379  Q
    |||||||||| | |||||||||||||||||||| |||||||||||||||||||||||    
T  14049425 tcccaattttccacaattcaatccccaaaactgattacagcattgctatatgattat 14049481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 261 - 327
Target Start/End: Original strand, 9638984 - 9639051
Alignment:
Q  261 atcaacaactacaatgttaaaccctttttcagaattatacaac-caattttagagaaagctagtccca 327  Q
    |||||||||||||| |||||||||||||||||||||| ||||| || | |||||||||||||||||||    
T  9638984 atcaacaactacaaggttaaaccctttttcagaattacacaactcattattagagaaagctagtccca 9639051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 263 - 327
Target Start/End: Original strand, 16296914 - 16296979
Alignment:
Q  263 caacaactacaatgttaaaccctttttcagaattatacaac-caattttagagaaagctagtccca 327  Q
    |||||||||| | |||||||||||||||||||||||||||| || | |||||||||||||||||||    
T  16296914 caacaactaccaggttaaaccctttttcagaattatacaactcattattagagaaagctagtccca 16296979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 264 - 324
Target Start/End: Original strand, 33186880 - 33186941
Alignment:
Q  264 aacaactacaatgttaaaccctttttcagaattatacaaccaatt-ttagagaaagctagtc 324  Q
    |||||| |||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  33186880 aacaaccacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtc 33186941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 263 - 327
Target Start/End: Original strand, 35660932 - 35660997
Alignment:
Q  263 caacaactacaatgttaaaccctttttcagaattatacaaccaatt-ttagagaaagctagtccca 327  Q
    |||||||||||| |||||||| ||||||| |||||||||||| ||| |||||||||||||||||||    
T  35660932 caacaactacaaggttaaaccatttttcataattatacaacccattattagagaaagctagtccca 35660997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 264 - 327
Target Start/End: Complemental strand, 12424367 - 12424301
Alignment:
Q  264 aacaactacaatgttaaaccct--ttttcagaattatacaaccaatt-ttagagaaagctagtccca 327  Q
    ||||||||||| ||||||||||  ||||||||||||||||||| ||| |||||||||||||||||||    
T  12424367 aacaactacaaagttaaaccctttttttcagaattatacaacccattattagagaaagctagtccca 12424301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 263 - 325
Target Start/End: Original strand, 26446183 - 26446246
Alignment:
Q  263 caacaactacaatgttaaaccctttttcagaattatacaaccaatt-ttagagaaagctagtcc 325  Q
    ||||||||||||  ||||||| |||||||||||||||||||| ||| |||||||||||||||||    
T  26446183 caacaactacaagattaaaccatttttcagaattatacaacccattattagagaaagctagtcc 26446246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 323 - 366
Target Start/End: Complemental strand, 13899087 - 13899044
Alignment:
Q  323 tcccaatttttcccaattcaatccccaaaactgtttacagcatt 366  Q
    |||||||||| |||||||||||||||||||||||||||| ||||    
T  13899087 tcccaattttccccaattcaatccccaaaactgtttacaacatt 13899044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 221 - 270
Target Start/End: Complemental strand, 15213730 - 15213681
Alignment:
Q  221 aagtatacatatatacataacttgagcatgtaaattcatcatcaacaact 270  Q
    ||||||||||||| |||||  |||||||||||| ||||||||||||||||    
T  15213730 aagtatacatataaacatatattgagcatgtaatttcatcatcaacaact 15213681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 221 - 270
Target Start/End: Complemental strand, 54363400 - 54363351
Alignment:
Q  221 aagtatacatatatacataacttgagcatgtaaattcatcatcaacaact 270  Q
    ||||||||||||| |||||  |||||||||||| ||||||||||||||||    
T  54363400 aagtatacatataaacatatattgagcatgtaatttcatcatcaacaact 54363351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 321 - 361
Target Start/End: Complemental strand, 16370952 - 16370912
Alignment:
Q  321 agtcccaatttttcccaattcaatccccaaaactgtttaca 361  Q
    |||||||||||| |||||||||||||||||||||| |||||    
T  16370952 agtcccaattttccccaattcaatccccaaaactgattaca 16370912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 270
Target Start/End: Complemental strand, 19622288 - 19622239
Alignment:
Q  221 aagtatacatatatacataacttgagcatgtaaattcatcatcaacaact 270  Q
    ||||||||||||| |||||  |||||||||||| |||||||| |||||||    
T  19622288 aagtatacatataaacatatattgagcatgtaatttcatcattaacaact 19622239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 359
Target Start/End: Complemental strand, 3863515 - 3863479
Alignment:
Q  323 tcccaatttttcccaattcaatccccaaaactgttta 359  Q
    ||||| |||| ||||||||||||||||||||||||||    
T  3863515 tcccagttttccccaattcaatccccaaaactgttta 3863479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 359
Target Start/End: Complemental strand, 3872272 - 3872236
Alignment:
Q  323 tcccaatttttcccaattcaatccccaaaactgttta 359  Q
    ||||| |||| ||||||||||||||||||||||||||    
T  3872272 tcccagttttccccaattcaatccccaaaactgttta 3872236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 321 - 353
Target Start/End: Original strand, 32490564 - 32490596
Alignment:
Q  321 agtcccaatttttcccaattcaatccccaaaac 353  Q
    |||||||||||| ||||||||||||||||||||    
T  32490564 agtcccaattttccccaattcaatccccaaaac 32490596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1186 (Bit Score: 179; Significance: 2e-96; HSPs: 2)
Name: scaffold1186
Description:

Target: scaffold1186; HSP #1
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 14 - 270
Target Start/End: Original strand, 1561 - 1818
Alignment:
Q  14 atataaaacatgacccaaaacattaatttacaaaa-tcacacttttcataaaagttctaaagaacagcaaaagttcacttcaagctttatgcttaagatt 112  Q
    ||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||||| | ||||| |||||||||| |||||||| |||| ||||||||    
T  1561 atataaaacatgacccaaaacattattttacaaaaatcacatttttcataaaagttctcaggaacaacaaaagttcaattcaagctctatggttaagatt 1660  T
Q  113 acccaaggtttcaatcatcaaaa-caacatctcataacaaaaacaacaactatcagaagtgaattcatcaacatcaacattatacttcaccaattttgag 211  Q
    | ||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||| |||||||||||||||| |||||||||    
T  1661 atccaaggtttcaatcatcaaaaacaacatctcataacaaaa-caacaacgatcagaagtgaattcatcaacaacaacattatacttcacaaattttgag 1759  T
Q  212 caaaaacacaagtatacatatatacataacttgagcatgtaaattcatcatcaacaact 270  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  1760 caaaaacacaagtatacatatatacatatcttgagcatgtaaattcatcatcagcaact 1818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1186; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 263 - 324
Target Start/End: Original strand, 1996 - 2058
Alignment:
Q  263 caacaactacaatgttaaaccctttttcagaattatacaaccaatt-ttagagaaagctagtc 324  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  1996 caacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtc 2058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 179; Significance: 2e-96; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 14 - 270
Target Start/End: Complemental strand, 186707 - 186450
Alignment:
Q  14 atataaaacatgacccaaaacattaatttacaaaa-tcacacttttcataaaagttctaaagaacagcaaaagttcacttcaagctttatgcttaagatt 112  Q
    ||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||||| | ||||| |||||||||| |||||||| |||| ||||||||    
T  186707 atataaaacatgacccaaaacattattttacaaaaatcacatttttcataaaagttctcaggaacaacaaaagttcaattcaagctctatggttaagatt 186608  T
Q  113 acccaaggtttcaatcatcaaaa-caacatctcataacaaaaacaacaactatcagaagtgaattcatcaacatcaacattatacttcaccaattttgag 211  Q
    | ||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||| |||||||||||||||| |||||||||    
T  186607 atccaaggtttcaatcatcaaaaacaacatctcataacaaaa-caacaacgatcagaagtgaattcatcaacaacaacattatacttcacaaattttgag 186509  T
Q  212 caaaaacacaagtatacatatatacataacttgagcatgtaaattcatcatcaacaact 270  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  186508 caaaaacacaagtatacatatatacatatcttgagcatgtaaattcatcatcagcaact 186450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 263 - 324
Target Start/End: Complemental strand, 186272 - 186210
Alignment:
Q  263 caacaactacaatgttaaaccctttttcagaattatacaaccaatt-ttagagaaagctagtc 324  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  186272 caacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtc 186210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 179; Significance: 2e-96; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 14 - 270
Target Start/End: Complemental strand, 1627582 - 1627324
Alignment:
Q  14 atataaaacatgacccaaaacattaatttacaaaa-tcacacttttcataaaagttctaaagaacagcaaaagttcacttcaagctttatgcttaagatt 112  Q
    ||||||||| |||| |||||||||| ||||||||| ||||| |||||||||||||||| ||||||| ||||||||||||||||||| |||| |||| | |    
T  1627582 atataaaacttgactcaaaacattattttacaaaaatcacatttttcataaaagttctcaagaacaacaaaagttcacttcaagctctatggttaaaagt 1627483  T
Q  113 acccaaggtttcaatcatcaaaa-caacatctcataacaaaaacaacaactatcagaagtgaattcatcaacatcaacattatacttcaccaattttgag 211  Q
    |||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  1627482 acccaaagtttcaatcatcaaaaacaacatctcataacaaaaacaacaacaatcagaagtgaattcatcaacaacaacattatacttcatcaattttgag 1627383  T
Q  212 caaaaacacaagtatacatatatacataacttgagcatgtaaattcatcatcaacaact 270  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  1627382 caaaaacacaagtatacatatatagataacttgagcatataaattcatcatcaacaact 1627324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 55 - 270
Target Start/End: Original strand, 660373 - 660586
Alignment:
Q  55 ttttcataaaagttctaaagaacagcaaaagttcacttcaagctttatgcttaagattacccaaggtttcaatcatcaaaa-caacatctcataacaaaa 153  Q
    |||||||||||||||| ||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  660373 ttttcataaaagttctcaagaacaacaaaagttcacttcaagctctatggttaagattacccaaggtttcaatcatcaaaaacaatatctcataacaaaa 660472  T
Q  154 acaacaactatcagaagtgaattcatcaacatcaacattatacttcaccaattttgagcaaaaacacaagtatacatatatacataacttgagcatgtaa 253  Q
    |||||||| ||||||||| ||||||||||||   ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  660473 acaacaacaatcagaagttaattcatcaaca---acattatacttcatcaattttgagcaaaaacacaagtatacatatatacataacttgagcatataa 660569  T
Q  254 attcatcatcaacaact 270  Q
    |||||||||||||||||    
T  660570 attcatcatcaacaact 660586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 132 - 270
Target Start/End: Original strand, 18744540 - 18744677
Alignment:
Q  132 aaaacaacatctcataacaaaaacaacaactatcagaagtgaattcatcaacatcaacattatacttcaccaattttgagcaaaaacacaagtatacata 231  Q
    |||||||||| ||||||||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  18744540 aaaacaacatttcataacaaaa-caacaacaatcagaagtgaattcatcaacaacaacattatacttcaccaattttgagcaaaaacacaagtatacata 18744638  T
Q  232 tatacataacttgagcatgtaaattcatcatcaacaact 270  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  18744639 tatacataacttgagcatataaattcatcatcaacaact 18744677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 186 - 270
Target Start/End: Complemental strand, 23199547 - 23199463
Alignment:
Q  186 caacattatacttcaccaattttgagcaaaaacacaagtatacatatatacataacttgagcatgtaaattcatcatcaacaact 270  Q
    |||||| |||||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  23199547 caacatcatacttcaccaattttgagcaaaaatgcaagtatacatatatacataacttgagcatataaattcatcatcaacaact 23199463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 323 - 379
Target Start/End: Original strand, 17813303 - 17813359
Alignment:
Q  323 tcccaatttttcccaattcaatccccaaaactgtttacagcattgctatatgattat 379  Q
    |||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||    
T  17813303 tcccaattttccccaattcaatccccaaaactgattacaacattgctatatgattat 17813359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 264 - 327
Target Start/End: Original strand, 18744851 - 18744915
Alignment:
Q  264 aacaactacaatgttaaaccctttttcagaattatacaaccaatt-ttagagaaagctagtccca 327  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||| ||||||||    
T  18744851 aacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagttagtccca 18744915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 264 - 327
Target Start/End: Complemental strand, 23199282 - 23199218
Alignment:
Q  264 aacaactacaatgttaaaccctttttcagaattatacaaccaatt-ttagagaaagctagtccca 327  Q
    ||||||||||| |||||||| |||||||||||||||||||| ||| |||||||||||||||||||    
T  23199282 aacaactacaaggttaaaccatttttcagaattatacaacccattattagagaaagctagtccca 23199218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 321 - 379
Target Start/End: Original strand, 6766577 - 6766635
Alignment:
Q  321 agtcccaatttttcccaattcaatccccaaaactgtttacagcattgctatatgattat 379  Q
    |||| ||||||| |||||||||||||||||||||| || ||||||||||||||||||||    
T  6766577 agtctcaattttccccaattcaatccccaaaactgattgcagcattgctatatgattat 6766635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 263 - 327
Target Start/End: Original strand, 16063727 - 16063792
Alignment:
Q  263 caacaactacaatgttaaaccctttttcagaattatacaaccaatt-ttagagaaagctagtccca 327  Q
    |||||||||||| |||||||||||||| |||||||||||||| ||| |||||||||| ||||||||    
T  16063727 caacaactacaaggttaaacccttttttagaattatacaacccattattagagaaaggtagtccca 16063792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 321 - 379
Target Start/End: Complemental strand, 24276731 - 24276673
Alignment:
Q  321 agtcccaatttttcccaattcaatccccaaaactgtttacagcattgctatatgattat 379  Q
    |||||||||||||||||||||| |||||||||||| ||||| || ||||| ||||||||    
T  24276731 agtcccaatttttcccaattcattccccaaaactgattacaacaatgctacatgattat 24276673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 321 - 379
Target Start/End: Original strand, 24385482 - 24385540
Alignment:
Q  321 agtcccaatttttcccaattcaatccccaaaactgtttacagcattgctatatgattat 379  Q
    |||||||||||||||||||||| |||||||||||| ||||| || ||||| ||||||||    
T  24385482 agtcccaatttttcccaattcattccccaaaactgattacaacaatgctacatgattat 24385540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 321 - 362
Target Start/End: Original strand, 7786001 - 7786042
Alignment:
Q  321 agtcccaatttttcccaattcaatccccaaaactgtttacag 362  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  7786001 agtcccaatttttcccaattcaatccccaaaactgattacag 7786042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 263 - 326
Target Start/End: Original strand, 660766 - 660829
Alignment:
Q  263 caacaactacaatgttaaaccctttttcagaattatacaaccaatt-ttagagaaagctagtccc 326  Q
    |||||||||||| |||||||| ||||||||||||||||||||  || ||||||||||||||||||    
T  660766 caacaactacaaggttaaacc-tttttcagaattatacaaccccttattagagaaagctagtccc 660829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 263 - 303
Target Start/End: Complemental strand, 6551366 - 6551326
Alignment:
Q  263 caacaactacaatgttaaaccctttttcagaattatacaac 303  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  6551366 caacaactacaaggttaaaccctttttcagaattatacaac 6551326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 323 - 366
Target Start/End: Original strand, 26754293 - 26754336
Alignment:
Q  323 tcccaatttttcccaattcaatccccaaaactgtttacagcatt 366  Q
    |||||| |||||||||||| ||||||||||||||||||| ||||    
T  26754293 tcccaaattttcccaattcgatccccaaaactgtttacaacatt 26754336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 327
Target Start/End: Complemental strand, 32607381 - 32607327
Alignment:
Q  274 atgttaaaccctttttcagaattatacaaccaatt-ttagagaaagctagtccca 327  Q
    ||||||||||| |||| ||||| |||||||| ||| |||||||||||||||||||    
T  32607381 atgttaaacccctttttagaatcatacaacccattattagagaaagctagtccca 32607327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 362
Target Start/End: Complemental strand, 21553621 - 21553580
Alignment:
Q  321 agtcccaatttttcccaattcaatccccaaaactgtttacag 362  Q
    |||||||||||| ||| |||||||||||||||||| ||||||    
T  21553621 agtcccaattttccccgattcaatccccaaaactgattacag 21553580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 362
Target Start/End: Complemental strand, 21980299 - 21980258
Alignment:
Q  321 agtcccaatttttcccaattcaatccccaaaactgtttacag 362  Q
    |||||||||||| ||||||||||||||||||| || ||||||    
T  21980299 agtcccaattttccccaattcaatccccaaaattgattacag 21980258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 20312904 - 20312948
Alignment:
Q  14 atataaaacatgacccaaaacattaatttacaaaatcacactttt 58  Q
    ||||||||| ||  |||||||||||||||||||||||||| ||||    
T  20312904 atataaaacttggaccaaaacattaatttacaaaatcacattttt 20312948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 327
Target Start/End: Original strand, 20313253 - 20313316
Alignment:
Q  263 caacaactacaatgttaaaccctttttcagaattatacaaccaattttagagaaagctagtccca 327  Q
    ||||||| || |||||||||||| ||||||||||||| | ||| | |||||| ||||||||||||    
T  20313253 caacaacaaccatgttaaaccctatttcagaattataaacccactattagag-aagctagtccca 20313316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878 (Bit Score: 165; Significance: 4e-88; HSPs: 2)
Name: scaffold0878
Description:

Target: scaffold0878; HSP #1
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 55 - 270
Target Start/End: Complemental strand, 3894 - 3678
Alignment:
Q  55 ttttcataaaagttctaaagaacagcaaaagttcacttcaagctttatgcttaagattacccaaggtttcaatcatcaaaa-caacatctcataacaaaa 153  Q
    |||||||||||||||| ||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  3894 ttttcataaaagttctcaagaacaacaaaagttcacttcaagctctatggttaagattacccaaggtttcaatcatcaaaaacaacatctcataacaaaa 3795  T
Q  154 acaacaactatcagaagtgaattcatcaacatcaacattatacttcaccaattttgagcaaaaacacaagtatacatatatacataacttgagcatgtaa 253  Q
    | |||||| |||||||||||||||||||||| |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  3794 ataacaacaatcagaagtgaattcatcaacaacaacattatagttcaccaattttaagcaaaaacacaagtatacatatatacataacttaagcatgtaa 3695  T
Q  254 attcatcatcaacaact 270  Q
    ||||||| |||||||||    
T  3694 attcatcttcaacaact 3678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 263 - 327
Target Start/End: Complemental strand, 3498 - 3433
Alignment:
Q  263 caacaactacaatgttaaaccctttttcagaattatacaac-caattttagagaaagctagtccca 327  Q
    |||||||||||| |||||||||||||||||||| ||||||| || | |||||||||||||||||||    
T  3498 caacaactacaaggttaaaccctttttcagaatcatacaacgcattattagagaaagctagtccca 3433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 164; Significance: 1e-87; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 55 - 269
Target Start/End: Complemental strand, 16087 - 15872
Alignment:
Q  55 ttttcataaaagttctaaagaacagcaaaagttcacttcaagctttatgcttaagattacccaaggtttcaatcatcaaaa-caacatctcataacaaaa 153  Q
    |||||||||||||||| ||||||| |||||||||||||||| || |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  16087 ttttcataaaagttctcaagaacaacaaaagttcacttcaatctctatggttaagattacccaaggtttcaatcatcaaaaacaacatctcataacaaaa 15988  T
Q  154 acaacaactatcagaagtgaattcatcaacatcaacattatacttcaccaattttgagcaaaaacacaagtatacatatatacataacttgagcatgtaa 253  Q
    |||||||| ||||||||||||||||||||||  ||| |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  15987 acaacaacaatcagaagtgaattcatcaacaataacgttatacttcaccaattttaagtaaaaacacaagtatacatatatacataacttgagcatgtaa 15888  T
Q  254 attcatcatcaacaac 269  Q
    ||||||||||||||||    
T  15887 attcatcatcaacaac 15872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 161; Significance: 9e-86; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 55 - 270
Target Start/End: Complemental strand, 28477206 - 28476990
Alignment:
Q  55 ttttcataaaagttctaaagaacagcaaaagttcacttcaagctttatgcttaagattacccaaggtttcaatcatcaaaa-caacatctcataacaaaa 153  Q
    |||||||||||||||| ||||||| |||||||||||||| |||| |||| ||||||||||||||||||||||| || |||| ||||||||| ||||||||    
T  28477206 ttttcataaaagttctcaagaacaacaaaagttcacttctagctctatggttaagattacccaaggtttcaattattaaaaacaacatctcgtaacaaaa 28477107  T
Q  154 acaacaactatcagaagtgaattcatcaacatcaacattatacttcaccaattttgagcaaaaacacaagtatacatatatacataacttgagcatgtaa 253  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  28477106 acaacaacaatcagaagtgaattcatcaacaacaacattatacttcaccaattttgagcaaaaacacaattatacatatatacataacttgagcatataa 28477007  T
Q  254 attcatcatcaacaact 270  Q
    |||||||||||||||||    
T  28477006 attcatcatcaacaact 28476990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 72 - 263
Target Start/End: Original strand, 20822616 - 20822819
Alignment:
Q  72 aagaacagcaaaagttcacttcaagctttatgcttaagattacccaaggtttcaatcatcaa-aacaacatctcataacaaaaacaacaactatcagaag 170  Q
    ||||||| || || ||||||||||||| |||| || |||||||||||||||||||||||||| || |||  |||| ||  | ||||||||| ||||||||    
T  20822616 aagaacaacacaaattcacttcaagctctatggttgagattacccaaggtttcaatcatcaacaataactactcacaatcacaacaacaacaatcagaag 20822715  T
Q  171 tgaatt-----------catcaacatcaacattatacttcaccaattttgagcaaaaacacaagtatacatatatacataacttgagcatgtaaattcat 259  Q
    ||||||           |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20822716 tgaattcatcagcaattcatcaacaacaacattatacttcaccaattttgagcaaaaacacaagtatacatatatacataacttgagcatgtaaattcat 20822815  T
Q  260 catc 263  Q
    ||||    
T  20822816 catc 20822819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 173 - 270
Target Start/End: Original strand, 20836533 - 20836630
Alignment:
Q  173 aattcatcaacatcaacattatacttcaccaattttgagcaaaaacacaagtatacatatatacataacttgagcatgtaaattcatcatcaacaact 270  Q
    ||||||| |||| | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  20836533 aattcataaacaaccacattctacttcaccaattttgagcaaaaacacaagtatacatatatacataacttgagcatgtaaattcatcatcaagaact 20836630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 186 - 270
Target Start/End: Complemental strand, 24719850 - 24719766
Alignment:
Q  186 caacattatacttcaccaattttgagcaaaaacacaagtatacatatatacataacttgagcatgtaaattcatcatcaacaact 270  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  24719850 caacatcatacttcaccaattttgagcaaaaacacaagtatacatatatacataacttgaacatataaattcatcatcaacaact 24719766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 321 - 379
Target Start/End: Original strand, 13227708 - 13227766
Alignment:
Q  321 agtcccaatttttcccaattcaatccccaaaactgtttacagcattgctatatgattat 379  Q
    |||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  13227708 agtcccaattttccccaattcaatccccaaaactgattacagcattgctatatgattat 13227766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 321 - 379
Target Start/End: Complemental strand, 21180511 - 21180453
Alignment:
Q  321 agtcccaatttttcccaattcaatccccaaaactgtttacagcattgctatatgattat 379  Q
    |||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  21180511 agtcccaatttttcccaattcattccccaaaactgattacagcattgctatatgattat 21180453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 213 - 270
Target Start/End: Original strand, 12710623 - 12710680
Alignment:
Q  213 aaaaacacaagtatacatatatacataacttgagcatgtaaattcatcatcaacaact 270  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  12710623 aaaaacacaagtatacatatatacataacttgaatatgtaaattcatcatcaacaact 12710680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 24719585 - 24719523
Alignment:
Q  264 aacaactacaatgttaaaccctttttcagaattatacaaccaatt-ttagagaaagctagtcc 325  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  24719585 aacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtcc 24719523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 321 - 379
Target Start/End: Original strand, 24960705 - 24960762
Alignment:
Q  321 agtcccaatttttcccaattcaatccccaaaactgtttacagcattgctatatgattat 379  Q
    |||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  24960705 agtcccaatttt-cccaattcaatccccaaaactgattacagcattgctatatgattat 24960762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 263 - 324
Target Start/End: Original strand, 50544848 - 50544910
Alignment:
Q  263 caacaactacaatgttaaaccctttttcagaattatacaaccaatt-ttagagaaagctagtc 324  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  50544848 caacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtc 50544910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 263 - 327
Target Start/End: Original strand, 12710843 - 12710908
Alignment:
Q  263 caacaactacaatgttaaaccctttttcagaattatacaa-ccaattttagagaaagctagtccca 327  Q
    ||||||||||||  |||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  12710843 caacaactacaagattaaaccctttttcagaattatacaacccaatattagagaaagctagtccca 12710908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 263 - 327
Target Start/End: Complemental strand, 38056748 - 38056683
Alignment:
Q  263 caacaactacaatgttaaaccctttttcagaattatacaaccaatt-ttagagaaagctagtccca 327  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||  ||||||||||||||||||    
T  38056748 caacaactacaaggttaaaccctttttcagaattatacaacccattactagagaaagctagtccca 38056683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 321 - 379
Target Start/End: Original strand, 29535896 - 29535954
Alignment:
Q  321 agtcccaatttttcccaattcaatccccaaaactgtttacagcattgctatatgattat 379  Q
    |||||||||||| |||||||| |||||||||| || |||||||||||||||||||||||    
T  29535896 agtcccaattttccccaattcgatccccaaaaatgattacagcattgctatatgattat 29535954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 263 - 327
Target Start/End: Complemental strand, 22145742 - 22145677
Alignment:
Q  263 caacaactacaatgttaaaccctttttcagaattatacaaccaatt-ttagagaaagctagtccca 327  Q
    |||||||||||| |||||||||||||||||||||| |||||| ||| |||||||||| ||||||||    
T  22145742 caacaactacaaggttaaaccctttttcagaattaaacaacccattattagagaaagttagtccca 22145677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 263 - 327
Target Start/End: Complemental strand, 28476810 - 28476745
Alignment:
Q  263 caacaactacaatgttaaaccctttttcagaattatacaac-caattttagagaaagctagtccca 327  Q
    |||||||||||| |||||||||||||||||||||||||||| || | ||||||||| |||||||||    
T  28476810 caacaactacaaggttaaaccctttttcagaattatacaactcattattagagaaatctagtccca 28476745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 274 - 324
Target Start/End: Complemental strand, 17901859 - 17901808
Alignment:
Q  274 atgttaaaccctttttcagaattatacaaccaatt-ttagagaaagctagtc 324  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  17901859 atgttaaaccctttttcagaattatacaacccattattagagaaagctagtc 17901808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 263 - 323
Target Start/End: Original strand, 6834152 - 6834213
Alignment:
Q  263 caacaactacaatgttaaaccctttttcagaattatacaac-caattttagagaaagctagt 323  Q
    ||||||| || |||||||||||||||||||||||||||||| || | |||||||||||||||    
T  6834152 caacaacaaccatgttaaaccctttttcagaattatacaactcattattagagaaagctagt 6834213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 133
Target Start/End: Original strand, 20836448 - 20836509
Alignment:
Q  72 aagaacagcaaaagttcacttcaagctttatgcttaagattacccaaggtttcaatcatcaa 133  Q
    ||||||| || || ||||||||||||| |||| || ||||||||||||||||||||||||||    
T  20836448 aagaacaacacaaattcacttcaagctctatggttgagattacccaaggtttcaatcatcaa 20836509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 261 - 324
Target Start/End: Complemental strand, 8276067 - 8276003
Alignment:
Q  261 atcaacaactacaatgttaaaccctttttcagaattatacaac-caattttagagaaagctagtc 324  Q
    |||||||||||||| ||||||||||||||||||||||||| || || | ||||| ||||||||||    
T  8276067 atcaacaactacaaggttaaaccctttttcagaattataccactcattattagataaagctagtc 8276003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 274 - 327
Target Start/End: Original strand, 8306593 - 8306647
Alignment:
Q  274 atgttaaaccctttttcagaattatacaaccaatt-ttagagaaagctagtccca 327  Q
    ||||||||||| |||| |||||||||||||| ||| |||||||||||||||||||    
T  8306593 atgttaaacccctttttagaattatacaacccattattagagaaagctagtccca 8306647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 325 - 379
Target Start/End: Original strand, 14801211 - 14801265
Alignment:
Q  325 ccaatttttcccaattcaatccccaaaactgtttacagcattgctatatgattat 379  Q
    |||||||| |||||||||||||||||||||| |||||| | || |||||||||||    
T  14801211 ccaattttccccaattcaatccccaaaactgattacagaagtgttatatgattat 14801265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 325 - 379
Target Start/End: Original strand, 14810085 - 14810139
Alignment:
Q  325 ccaatttttcccaattcaatccccaaaactgtttacagcattgctatatgattat 379  Q
    |||||||| |||||||||||||||||||||| |||||| | || |||||||||||    
T  14810085 ccaattttccccaattcaatccccaaaactgattacagaagtgttatatgattat 14810139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 263 - 327
Target Start/End: Complemental strand, 24007301 - 24007236
Alignment:
Q  263 caacaactacaatg-ttaaaccctttttcagaattatacaaccaattttagagaaagctagtccca 327  Q
    |||||||||||| | ||||||| |||||||||||||||||| || | | |||||||||||||||||    
T  24007301 caacaactacaaaggttaaaccttttttcagaattatacaatcattatcagagaaagctagtccca 24007236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 324
Target Start/End: Complemental strand, 635064 - 635018
Alignment:
Q  279 aaaccctttttcagaattatacaaccaatt-ttagagaaagctagtc 324  Q
    ||||||||||| |||||||||||||| ||| ||||||||||||||||    
T  635064 aaacccttttttagaattatacaacctattattagagaaagctagtc 635018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 299
Target Start/End: Original strand, 39061295 - 39061333
Alignment:
Q  261 atcaacaactacaatgttaaaccctttttcagaattata 299  Q
    |||||||||||||| |||||||| |||||||||||||||    
T  39061295 atcaacaactacaaggttaaaccttttttcagaattata 39061333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 41931354 - 41931308
Alignment:
Q  224 tatacatatatacataacttgagcatgtaaattcatcatcaacaact 270  Q
    |||| ||||||| ||||||||| ||||||| ||||||||||||||||    
T  41931354 tatatatatatatataacttgaacatgtaatttcatcatcaacaact 41931308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 325
Target Start/End: Original strand, 35895086 - 35895138
Alignment:
Q  274 atgttaaaccctttttcagaattatacaaccaatt-ttagagaaagctagtcc 325  Q
    |||||||| ||||||||||||| |||||||| ||| ||||| |||||||||||    
T  35895086 atgttaaaacctttttcagaatcatacaacccattattagataaagctagtcc 35895138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 96; Significance: 6e-47; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 72 - 270
Target Start/End: Original strand, 29114349 - 29114559
Alignment:
Q  72 aagaacagcaaaagttcacttcaagctttatgcttaagattacccaaggtttcaatcatcaa-aacaacatctcataacaaaaacaacaactatcagaag 170  Q
    ||||||| || || |||||||||||||  ||| ||||||||||||||||||||||||||||| ||||||  |||| ||  | ||||||||| ||||||||    
T  29114349 aagaacaacacaaattcacttcaagctccatggttaagattacccaaggtttcaatcatcaacaacaactactcacaatcacaacaacaacaatcagaag 29114448  T
Q  171 tgaattcatcaa-----catcaaca------ttatacttcaccaattttgagcaaaaacacaagtatacatatatacataacttgagcatgtaaattcat 259  Q
    ||||||||||||     ||||||||      ||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  29114449 tgaattcatcaatagttcatcaacaataacattatatttcaccaattttgagtaaaaacacaagtatacatttatacataacttgagcatgtaaattcat 29114548  T
Q  260 catcaacaact 270  Q
    |||||||||||    
T  29114549 catcaacaact 29114559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 186 - 270
Target Start/End: Complemental strand, 21315818 - 21315734
Alignment:
Q  186 caacattatacttcaccaattttgagcaaaaacacaagtatacatatatacataacttgagcatgtaaattcatcatcaacaact 270  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  21315818 caacatcatacttcaccaattttgagcaaaaacacaagtatacatatatacataacttgagcatataaattcatcatcaacaact 21315734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 186 - 270
Target Start/End: Original strand, 21369004 - 21369088
Alignment:
Q  186 caacattatacttcaccaattttgagcaaaaacacaagtatacatatatacataacttgagcatgtaaattcatcatcaacaact 270  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  21369004 caacatcatacttcaccaattttgagcaaaaacacaagtatacatatatacataacttgagcatataaattcatcaacaacaact 21369088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 186 - 270
Target Start/End: Complemental strand, 21335608 - 21335524
Alignment:
Q  186 caacattatacttcaccaattttgagcaaaaacacaagtatacatatatacataacttgagcatgtaaattcatcatcaacaact 270  Q
    |||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  21335608 caacatcatacttcaccaattttgtgcaaaaacacaagtatatatatatacataacttgagcatataaattcatcatcaacaact 21335524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 23068650 - 23068535
Alignment:
Q  16 ataaaacatgacccaaaacattaatttacaaaa-tcacacttttcataaaagttctaaagaacagcaaaagttcacttcaagctttatgcttaagattac 114  Q
    |||||| ||||||||||| |||| ||||||||| ||||| |||||||||||||||| ||||||| ||||||||||||||||||| |||| | ||| ||||    
T  23068650 ataaaagatgacccaaaatattattttacaaaaatcacatttttcataaaagttctcaagaacaacaaaagttcacttcaagctctatggtaaagtttac 23068551  T
Q  115 ccaaggtttcaatcat 130  Q
    ||||| ||||||||||    
T  23068550 ccaagatttcaatcat 23068535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 210 - 268
Target Start/End: Original strand, 23610356 - 23610414
Alignment:
Q  210 agcaaaaacacaagtatacatatatacataacttgagcatgtaaattcatcatcaacaa 268  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  23610356 agcaaaaacacaagtatacatatatacataacttgagcatataaattcatcatcaacaa 23610414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 264 - 327
Target Start/End: Complemental strand, 21315551 - 21315487
Alignment:
Q  264 aacaactacaatgttaaaccctttttcagaattatacaaccaatt-ttagagaaagctagtccca 327  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  21315551 aacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtccca 21315487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 264 - 327
Target Start/End: Complemental strand, 21335341 - 21335277
Alignment:
Q  264 aacaactacaatgttaaaccctttttcagaattatacaaccaatt-ttagagaaagctagtccca 327  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  21335341 aacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtccca 21335277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 323 - 366
Target Start/End: Complemental strand, 38929252 - 38929209
Alignment:
Q  323 tcccaatttttcccaattcaatccccaaaactgtttacagcatt 366  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  38929252 tcccaatttttcccaattcaatccccaaaactgtttacagcatt 38929209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 267 - 327
Target Start/End: Original strand, 21369273 - 21369334
Alignment:
Q  267 aactacaatgttaaaccctttttcagaattatacaaccaatt-ttagagaaagctagtccca 327  Q
    |||||||| ||||||||||||||||||||||||||||| ||| |||||||||||| ||||||    
T  21369273 aactacaaggttaaaccctttttcagaattatacaacccattgttagagaaagcttgtccca 21369334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 263 - 327
Target Start/End: Original strand, 23610602 - 23610667
Alignment:
Q  263 caacaactacaatgttaaaccctttttcagaattatacaaccaatt-ttagagaaagctagtccca 327  Q
    ||||||||| || |||||||| ||||||| |||||||||||| ||| |||||||||||||||||||    
T  23610602 caacaactagaaggttaaaccatttttcataattatacaacccattattagagaaagctagtccca 23610667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 321 - 361
Target Start/End: Original strand, 25652045 - 25652085
Alignment:
Q  321 agtcccaatttttcccaattcaatccccaaaactgtttaca 361  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  25652045 agtcccaatttttcccaattcaatccccaaaactgattaca 25652085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 55 - 108
Target Start/End: Original strand, 22686793 - 22686846
Alignment:
Q  55 ttttcataaaagttctaaagaacagcaaaagttcacttcaagctttatgcttaa 108  Q
    |||||||||||||||| ||||||| |||||||||||||||| || |||| ||||    
T  22686793 ttttcataaaagttcttaagaacaacaaaagttcacttcaatctctatggttaa 22686846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 321 - 361
Target Start/End: Original strand, 24161099 - 24161139
Alignment:
Q  321 agtcccaatttttcccaattcaatccccaaaactgtttaca 361  Q
    ||||||||||||| ||||||||||||||||||||| |||||    
T  24161099 agtcccaattttttccaattcaatccccaaaactgattaca 24161139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 303
Target Start/End: Complemental strand, 34491316 - 34491276
Alignment:
Q  263 caacaactacaatgttaaaccctttttcagaattatacaac 303  Q
    ||||||| || ||||||||||||||||||||||||||||||    
T  34491316 caacaacaaccatgttaaaccctttttcagaattatacaac 34491276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 327
Target Start/End: Original strand, 23801483 - 23801537
Alignment:
Q  274 atgttaaaccctttttcagaattatacaaccaatt-ttagagaaagctagtccca 327  Q
    ||||||||||| |||| ||||| |||||||| ||| |||||||||||||||||||    
T  23801483 atgttaaacccctttttagaatcatacaacccattattagagaaagctagtccca 23801537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 362
Target Start/End: Original strand, 23086222 - 23086263
Alignment:
Q  321 agtcccaatttttcccaattcaatccccaaaactgtttacag 362  Q
    |||||| ||||| |||||||||||||||||||||| ||||||    
T  23086222 agtccctattttccccaattcaatccccaaaactgattacag 23086263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 51
Target Start/End: Original strand, 27852276 - 27852313
Alignment:
Q  14 atataaaacatgacccaaaacattaatttacaaaatca 51  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  27852276 atataaaacttgacccaaaacattaattcacaaaatca 27852313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 84; Significance: 8e-40; HSPs: 3)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 55 - 161
Target Start/End: Complemental strand, 7766 - 7659
Alignment:
Q  55 ttttcataaaagttctaaagaacagcaaaagttcacttcaagctttatgcttaagattacccaaggtttcaatcatc-aaaacaacatctcataacaaaa 153  Q
    |||||||||||||||| ||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  7766 ttttcataaaagttctcaagaacaacaaaagttcacttcaagctctatggttaagattacccaaggtttcaatcatcaaaaacaacatctcataacaaaa 7667  T
Q  154 acaacaac 161  Q
    ||||||||    
T  7666 acaacaac 7659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 181 - 270
Target Start/End: Complemental strand, 7667 - 7578
Alignment:
Q  181 aacatcaacattatacttcaccaattttgagcaaaaacacaagtatacatatatacataacttgagcatgtaaattcatcatcaacaact 270  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  7667 aacaacaacattatacttcaccaattttgagcaaaaacacaagtatacatatacacataacttgaacatgtaaattcatcatcaacaact 7578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 263 - 327
Target Start/End: Complemental strand, 5381 - 5316
Alignment:
Q  263 caacaactacaatgttaaaccctttttcagaattatacaac-caattttagagaaagctagtccca 327  Q
    |||||||||||| |||||||||||||| |||||||||||||  ||  |||||||||| ||||||||    
T  5381 caacaactacaaggttaaaccctttttaagaattatacaacttaaaattagagaaagttagtccca 5316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 81; Significance: 5e-38; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 174 - 270
Target Start/End: Original strand, 15878 - 15974
Alignment:
Q  174 attcatcaacatcaacattatacttcaccaattttgagcaaaaacacaagtatacatatatacataacttgagcatgtaaattcatcatcaacaact 270  Q
    ||||||||||| ||| ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15878 attcatcaacaacaatattatacttcatcaattttgagtaaaaacacaagtatacatatatacataacttgagcatgtaaattcatcatcaacaact 15974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 263 - 324
Target Start/End: Original strand, 18251 - 18313
Alignment:
Q  263 caacaactacaatgttaaaccctttttcagaattatacaaccaatt-ttagagaaagctagtc 324  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  18251 caacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtc 18313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 120763 - 120878
Alignment:
Q  16 ataaaacatgacccaaaacattaatttacaaaa-tcacacttttcataaaagttctaaagaacagcaaaagttcacttcaagctttatgcttaagattac 114  Q
    |||||| |||||||||||||||| ||||||||| ||||| |||||||||||||||| ||||||| ||||||||||||||||||| |||| ||||||||||    
T  120763 ataaaagatgacccaaaacattattttacaaaaatcacatttttcataaaagttctcaagaacaacaaaagttcacttcaagctctatggttaagattac 120862  T
Q  115 ccaaggtttcaatcat 130  Q
    ||||||||||||||||    
T  120863 ccaaggtttcaatcat 120878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 126598 - 126715
Alignment:
Q  14 atataaaacatgacccaaaacattaatttacaaaa-tcacacttttcataaaagttctaaagaacagcaaaagttcacttcaagctttatgcttaagatt 112  Q
    |||||||| |||||||||||||||| ||||||||| ||||| |||||||||||||||| ||||||| ||||||||||||||||||| |||| ||||||||    
T  126598 atataaaagatgacccaaaacattattttacaaaaatcacatttttcataaaagttctcaagaacaacaaaagttcacttcaagctctatggttaagatt 126697  T
Q  113 acccaaggtttcaatcat 130  Q
    ||||||||||| ||||||    
T  126698 acccaaggttttaatcat 126715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 76; Significance: 5e-35; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 15704811 - 15704696
Alignment:
Q  16 ataaaacatgacccaaaacattaatttacaaaa-tcacacttttcataaaagttctaaagaacagcaaaagttcacttcaagctttatgcttaagattac 114  Q
    |||||| ||| |||||||||||| ||||||||| ||||| |||||||||||||||| ||||||| ||||||||||||||||||| |||| ||||||||||    
T  15704811 ataaaagatgtcccaaaacattattttacaaaaatcacatttttcataaaagttctcaagaacaacaaaagttcacttcaagctctatggttaagattac 15704712  T
Q  115 ccaaggtttcaatcat 130  Q
    ||||||||||||||||    
T  15704711 ccaaggtttcaatcat 15704696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 19772909 - 19772794
Alignment:
Q  16 ataaaacatgacccaaaacattaatttacaaaa-tcacacttttcataaaagttctaaagaacagcaaaagttcacttcaagctttatgcttaagattac 114  Q
    |||||| ||||||||||| |||| ||||||||| ||||| |||||||||||||||| ||||||| ||||||||||||||||||| |||| ||||||||||    
T  19772909 ataaaagatgacccaaaatattattttacaaaaatcacatttttcataaaagttctcaagaacaacaaaagttcacttcaagctctatggttaagattac 19772810  T
Q  115 ccaaggtttcaatcat 130  Q
    ||| ||||||||||||    
T  19772809 ccatggtttcaatcat 19772794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 186 - 270
Target Start/End: Complemental strand, 20410850 - 20410766
Alignment:
Q  186 caacattatacttcaccaattttgagcaaaaacacaagtatacatatatacataacttgagcatgtaaattcatcatcaacaact 270  Q
    |||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||    
T  20410850 caacatcatacttcaccaattttgagcaaaaacacaagtatacttatatacataactcgagcatataaattcatcatcaacaact 20410766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 20183464 - 20183583
Alignment:
Q  14 atataaaacatgacccaaaacattaatttacaaaa-tcacacttttcataaaagttctaaagaacagcaaaagttcacttcaagctttatgcttaagatt 112  Q
    |||||||  |||||||||||||||| ||||||||| ||||| |||||||||||||||| ||||||| ||||||||||||||||||| | || ||||||||    
T  20183464 atataaattatgacccaaaacattattttacaaaaatcacatttttcataaaagttctcaagaacaacaaaagttcacttcaagctctctggttaagatt 20183563  T
Q  113 acccaaggtttcaatcatca 132  Q
    ||| ||||||||||| ||||    
T  20183564 acctaaggtttcaattatca 20183583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 22152527 - 22152408
Alignment:
Q  14 atataaaacatgacccaaaacattaatttacaaaa-tcacacttttcataaaagttctaaagaacagcaaaagttcacttcaagctttatgcttaagatt 112  Q
    |||||||  |||||||||||||||| ||||||||| ||||| |||||||||||||||| ||||||| ||||||||||||||||||| | || ||||||||    
T  22152527 atataaattatgacccaaaacattattttacaaaaatcacatttttcataaaagttctcaagaacaacaaaagttcacttcaagctctctggttaagatt 22152428  T
Q  113 acccaaggtttcaatcatca 132  Q
    ||| ||||||||||| ||||    
T  22152427 acctaaggtttcaattatca 22152408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 137 - 207
Target Start/End: Complemental strand, 21686322 - 21686252
Alignment:
Q  137 aacatctcataacaaaaacaacaactatcagaagtgaattcatcaacatcaacattatacttcaccaattt 207  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  21686322 aacatcgcataacaaaaacaacaacaatcagaagtgaattcatcaacaacaacattatacttcaccaattt 21686252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 19009111 - 19009167
Alignment:
Q  14 atataaaacatgacccaaaacattaatttacaaaatcacacttttcataaaagttct 70  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19009111 atataaaacatgacccaaaacattaatttacaaaatcacacttttcataaaagttct 19009167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 321 - 379
Target Start/End: Original strand, 29266167 - 29266225
Alignment:
Q  321 agtcccaatttttcccaattcaatccccaaaactgtttacagcattgctatatgattat 379  Q
    |||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  29266167 agtcccaattttccccaattcaatccccaaaactgattacagcattgctatatgattat 29266225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 263 - 327
Target Start/End: Complemental strand, 21683151 - 21683086
Alignment:
Q  263 caacaactacaatgttaaaccctttttcagaattatacaaccaatt-ttagagaaagctagtccca 327  Q
    |||||||||||| ||||||||||||||| ||||||||||||| ||| |||||||||||||||||||    
T  21683151 caacaactacaaggttaaaccctttttctgaattatacaacccattattagagaaagctagtccca 21683086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 264 - 327
Target Start/End: Original strand, 23658066 - 23658130
Alignment:
Q  264 aacaactacaatgttaaaccctttttcagaattatacaaccaatt-ttagagaaagctagtccca 327  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||| |||| ||||||||||||||    
T  23658066 aacaactacaaggttaaaccctttttcagaattatacaacctattattagggaaagctagtccca 23658130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 176 - 270
Target Start/End: Complemental strand, 17856610 - 17856515
Alignment:
Q  176 tcatcaacatcaacattatacttcaccaattttgagcaaaaacacaa-gtatacatatatacataacttgagcatgtaaattcatcatcaacaact 270  Q
    ||||||||| |||||| ||  |||| ||||||| | | ||||||||| ||||||||||||||| | ||||||||||||| ||||||||||||||||    
T  17856610 tcatcaacaacaacataatttttcatcaattttaaacgaaaacacaaagtatacatatatacacatcttgagcatgtaatttcatcatcaacaact 17856515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 321 - 379
Target Start/End: Complemental strand, 15816894 - 15816836
Alignment:
Q  321 agtcccaatttttcccaattcaatccccaaaactgtttacagcattgctatatgattat 379  Q
    |||||| ||||| |||||||||||| ||||||||| ||||||||||||||||| |||||    
T  15816894 agtccctattttccccaattcaatcgccaaaactgattacagcattgctatataattat 15816836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 263 - 324
Target Start/End: Complemental strand, 19825562 - 19825500
Alignment:
Q  263 caacaactacaatgttaaaccctttttcagaattatacaaccaatt-ttagagaaagctagtc 324  Q
    |||||||||||| |||||| |||||||||||||||| ||||| ||| ||||||||||||||||    
T  19825562 caacaactacaaggttaaaacctttttcagaattatgcaacccattattagagaaagctagtc 19825500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 20410587 - 20410529
Alignment:
Q  264 aacaactacaatgttaaaccctttttcagaattatacaaccaatt-ttagagaaagcta 321  Q
    ||||||||||| |||||| |||||||||||||||||||||| ||| |||||||||||||    
T  20410587 aacaactacaaggttaaatcctttttcagaattatacaacccattattagagaaagcta 20410529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 263 - 304
Target Start/End: Original strand, 18982548 - 18982589
Alignment:
Q  263 caacaactacaatgttaaaccctttttcagaattatacaacc 304  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  18982548 caacaactacaaggttaaaccctttttcagaattatacaacc 18982589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 323 - 366
Target Start/End: Complemental strand, 14995465 - 14995422
Alignment:
Q  323 tcccaatttttcccaattcaatccccaaaactgtttacagcatt 366  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||    
T  14995465 tcccaatttttcccaattcaaaccccaaaactgtttacaacatt 14995422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 274 - 324
Target Start/End: Original strand, 29045258 - 29045309
Alignment:
Q  274 atgttaaaccctttttcagaattatacaaccaatt-ttagagaaagctagtc 324  Q
    |||||||||||||||||| |||||||||||| ||| ||||||||||||||||    
T  29045258 atgttaaaccctttttcaaaattatacaacccattattagagaaagctagtc 29045309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 25921632 - 25921681
Alignment:
Q  14 atataaaacatgacccaaaacattaatttacaaa-atcacacttttcata 62  Q
    ||||||||||||||||||||||||| |||||||| |||||| ||||||||    
T  25921632 atataaaacatgacccaaaacattattttacaaacatcacatttttcata 25921681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 323 - 379
Target Start/End: Complemental strand, 1590011 - 1589955
Alignment:
Q  323 tcccaatttttcccaattcaatccccaaaactgtttacagcattgctatatgattat 379  Q
    |||||||||| |||||||||||||||||||||| ||||| || || || ||||||||    
T  1590011 tcccaattttccccaattcaatccccaaaactgattacaacaatgttacatgattat 1589955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 303
Target Start/End: Original strand, 15998865 - 15998905
Alignment:
Q  263 caacaactacaatgttaaaccctttttcagaattatacaac 303  Q
    |||||||||||| ||||||| ||||||||||||||||||||    
T  15998865 caacaactacaaggttaaactctttttcagaattatacaac 15998905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 323 - 367
Target Start/End: Original strand, 22347312 - 22347356
Alignment:
Q  323 tcccaatttttcccaattcaatccccaaaactgtttacagcattg 367  Q
    |||| ||||| ||||||||||||||||||||||||||||| ||||    
T  22347312 tccccattttccccaattcaatccccaaaactgtttacagtattg 22347356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 323 - 362
Target Start/End: Complemental strand, 17026625 - 17026586
Alignment:
Q  323 tcccaatttttcccaattcaatccccaaaactgtttacag 362  Q
    |||| |||||||||||||||||||||||||| ||||||||    
T  17026625 tccccatttttcccaattcaatccccaaaacagtttacag 17026586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 375
Target Start/End: Original strand, 1639777 - 1639830
Alignment:
Q  321 agtcccaatttttcccaattcaatccccaaaactgtttacagcattgctatatga 375  Q
    |||||||||||| ||||||||||| |||||||||| ||||| || ||||||||||    
T  1639777 agtcccaattttccccaattcaat-cccaaaactgattacaacaatgctatatga 1639830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 327
Target Start/End: Original strand, 10446204 - 10446258
Alignment:
Q  274 atgttaaaccctttttcagaattatacaaccaatt-ttagagaaagctagtccca 327  Q
    ||||||||||| |||| ||||| |||||||| ||| |||||||||||||||||||    
T  10446204 atgttaaacccctttttagaatcatacaacccattattagagaaagctagtccca 10446258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 299
Target Start/End: Complemental strand, 24506193 - 24506155
Alignment:
Q  261 atcaacaactacaatgttaaaccctttttcagaattata 299  Q
    ||||||||||||||  |||||||||||||||||||||||    
T  24506193 atcaacaactacaaaattaaaccctttttcagaattata 24506155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 321 - 361
Target Start/End: Original strand, 1585055 - 1585095
Alignment:
Q  321 agtcccaatttttcccaattcaatccccaaaactgtttaca 361  Q
    |||||||||||| ||||||||||| |||||||||| |||||    
T  1585055 agtcccaattttccccaattcaattcccaaaactgattaca 1585095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 69; Significance: 7e-31; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 186 - 270
Target Start/End: Complemental strand, 24222 - 24138
Alignment:
Q  186 caacattatacttcaccaattttgagcaaaaacacaagtatacatatatacataacttgagcatgtaaattcatcatcaacaact 270  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| ||||    
T  24222 caacatcatacttcaccaattttgagcaaaaacacaagtatacatatatacataacttgagcatatgaattcatcatcaagaact 24138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0452 (Bit Score: 68; Significance: 3e-30; HSPs: 2)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 12865 - 12750
Alignment:
Q  16 ataaaacatgacccaaaacattaatttacaaaa-tcacacttttcataaaagttctaaagaacagcaaaagttcacttcaagctttatgcttaagattac 114  Q
    |||||| ||||||||||||||||  |||||||| ||||| |||||||| ||||||| ||||||| |||||||||||||||| || |||| ||||||||||    
T  12865 ataaaagatgacccaaaacattatgttacaaaaatcacatttttcatagaagttctcaagaacaacaaaagttcacttcaaactctatggttaagattac 12766  T
Q  115 ccaaggtttcaatcat 130  Q
    ||||||||||||||||    
T  12765 ccaaggtttcaatcat 12750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0452; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 221 - 270
Target Start/End: Complemental strand, 2892 - 2843
Alignment:
Q  221 aagtatacatatatacataacttgagcatgtaaattcatcatcaacaact 270  Q
    ||||||||||||| |||||  |||||||||||| ||||||||||||||||    
T  2892 aagtatacatataaacatatattgagcatgtaatttcatcatcaacaact 2843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 7365 - 7480
Alignment:
Q  16 ataaaacatgacccaaaacattaatttacaaaa-tcacacttttcataaaagttctaaagaacagcaaaagttcacttcaagctttatgcttaagattac 114  Q
    |||||| |||||||||||||||| ||||||||| ||||| |||||||||||||||| ||||||| |||||||||||||||||||  ||| |||| |||||    
T  7365 ataaaagatgacccaaaacattattttacaaaaatcacatttttcataaaagttctcaagaacaacaaaagttcacttcaagctccatggttaatattac 7464  T
Q  115 ccaaggtttcaatcat 130  Q
    ||||||||| ||||||    
T  7465 ccaaggtttgaatcat 7480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 68; Significance: 3e-30; HSPs: 2)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 30463 - 30578
Alignment:
Q  16 ataaaacatgacccaaaacattaatttacaaaa-tcacacttttcataaaagttctaaagaacagcaaaagttcacttcaagctttatgcttaagattac 114  Q
    |||||| ||||| |||||||||| ||||||||| ||||| |||||||||||||||| ||||| | ||||||||||||||||| | |||| ||||||||||    
T  30463 ataaaagatgactcaaaacattattttacaaaaatcacatttttcataaaagttcttaagaataacaaaagttcacttcaagttctatggttaagattac 30562  T
Q  115 ccaaggtttcaatcat 130  Q
    ||||||||||||||||    
T  30563 ccaaggtttcaatcat 30578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 6036 - 5992
Alignment:
Q  14 atataaaacatgacccaaaacattaatttacaaaatcacactttt 58  Q
    ||||||||| ||  |||||||||||||||||||||||||| ||||    
T  6036 atataaaacttggaccaaaacattaatttacaaaatcacattttt 5992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 68; Significance: 3e-30; HSPs: 2)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 186 - 270
Target Start/End: Complemental strand, 18282 - 18196
Alignment:
Q  186 caacattatacttcaccaattttgagcaaaaacacaagtatacata--tatacataacttgagcatgtaaattcatcatcaacaact 270  Q
    |||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||    
T  18282 caacatcatacttcaccaattttgagcaaaaacacaagtatacatatatatacataacttgagcatataaattcatcatcaacaact 18196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 303
Target Start/End: Complemental strand, 18016 - 17976
Alignment:
Q  263 caacaactacaatgttaaaccctttttcagaattatacaac 303  Q
    |||||||||||| |||||| |||||||||||||||||||||    
T  18016 caacaactacaaggttaaatcctttttcagaattatacaac 17976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 21919 - 22030
Alignment:
Q  16 ataaaacatgacccaaaacattaatttacaaaa-tcacacttttcataaaagttctaaagaacagcaaaagttcacttcaagctttatgcttaagattac 114  Q
    |||||| |||||| ||||||||| ||||||||| ||||| |||||||||||||||| || |||| ||||||||||||||||||| |||| ||||||||||    
T  21919 ataaaagatgacctaaaacattattttacaaaaatcacatttttcataaaagttctcaaaaacaacaaaagttcacttcaagctctatggttaagattac 22018  T
Q  115 ccaaggtttcaa 126  Q
    ||||||||||||    
T  22019 ccaaggtttcaa 22030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 186 - 270
Target Start/End: Complemental strand, 62193 - 62107
Alignment:
Q  186 caacattatacttcaccaattttgagcaaaaacacaagtatacata--tatacataacttgagcatgtaaattcatcatcaacaact 270  Q
    |||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||    
T  62193 caacatcatacttcaccaattttgagcaaaaacacaagtatacatatatatacataacttgagcatataaattcatcatcaacaact 62107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 29880 - 29995
Alignment:
Q  16 ataaaacatgacccaaaacattaatttacaaaa-tcacacttttcataaaagttctaaagaacagcaaaagttcacttcaagctttatgcttaagattac 114  Q
    |||||| ||||| |||||||||| ||||||||| ||||| |||||||||||||||| ||||| | ||||||||||||||||| | |||| ||||||||||    
T  29880 ataaaagatgactcaaaacattattttacaaaaatcacatttttcataaaagttctcaagaataacaaaagttcacttcaagttctatggttaagattac 29979  T
Q  115 ccaaggtttcaatcat 130  Q
    ||||||||||||||||    
T  29980 ccaaggtttcaatcat 29995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 21504 - 21619
Alignment:
Q  16 ataaaacatgacccaaaacattaatttacaaaa-tcacacttttcataaaagttctaaagaacagcaaaagttcacttcaagctttatgcttaagattac 114  Q
    |||||| ||||||||||| |||| ||||||||| ||||| |||||||||||||||| ||||| |  |||||||||||||||||| |||| ||||||||||    
T  21504 ataaaagatgacccaaaatattattttacaaaaatcacatttttcataaaagttctcaagaataataaaagttcacttcaagctctatggttaagattac 21603  T
Q  115 ccaaggtttcaatcat 130  Q
    ||||||||||||||||    
T  21604 ccaaggtttcaatcat 21619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 64; Significance: 7e-28; HSPs: 2)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 27786 - 27901
Alignment:
Q  16 ataaaacatgacccaaaacattaatttacaaaa-tcacacttttcataaaagttctaaagaacagcaaaagttcacttcaagctttatgcttaagattac 114  Q
    |||||| ||||||||||| |||| ||||||||| ||||| |||||||||||||||| ||||||| ||||| ||||||||| | | |||| ||||||||||    
T  27786 ataaaagatgacccaaaatattattttacaaaaatcacatttttcataaaagttctcaagaacaacaaaaattcacttcatgttctatggttaagattac 27885  T
Q  115 ccaaggtttcaatcat 130  Q
    ||||||||||||||||    
T  27886 ccaaggtttcaatcat 27901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 42644 - 42759
Alignment:
Q  16 ataaaacatgacccaaaacattaatttacaaaa-tcacacttttcataaaagttctaaagaacagcaaaagttcacttcaagctttatgcttaagattac 114  Q
    |||||| ||||||||||| |||| ||||||||| ||||| |||||||||||||||| ||||||| ||||| ||||||||| | | |||| ||||||||||    
T  42644 ataaaagatgacccaaaatattattttacaaaaatcacatttttcataaaagttctcaagaacaacaaaaattcacttcatgttctatggttaagattac 42743  T
Q  115 ccaaggtttcaatcat 130  Q
    ||||||||||||||||    
T  42744 ccaaggtttcaatcat 42759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0468 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 171 - 270
Target Start/End: Complemental strand, 11123 - 11023
Alignment:
Q  171 tgaattcatcaacatcaacattatacttcaccaattttgagcaaaaacacaa-gtatacatatatacataacttgagcatgtaaattcatcatcaacaac 269  Q
    |||||||||||||| |||||||||| |||| ||||||||||  ||||||||| ||||||||||||||| | ||||||||||||| |||||||||||||||    
T  11123 tgaattcatcaacaacaacattatatttcatcaattttgagtgaaaacacaaagtatacatatatacacatcttgagcatgtaatttcatcatcaacaac 11024  T
Q  270 t 270  Q
    |    
T  11023 t 11023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 65183 - 65104
Alignment:
Q  14 atataaaacatgacccaaaacattaatttacaaaa-tcacacttttcataaaagttctaaagaacagcaaaagttcactt 92  Q
    ||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||||| ||||||| |||||||||||||    
T  65183 atataaaacatgacccaaaacattattttacaaaaatcacatttttcataaaagttctcaagaacaacaaaagttcactt 65104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 16 - 103
Target Start/End: Original strand, 40255 - 40343
Alignment:
Q  16 ataaaacatgacccaaaacattaatttacaaaa-tcacacttttcataaaagttctaaagaacagcaaaagttcacttcaagctttatg 103  Q
    |||||| |||||||||||||||| ||||||||| ||||| |||||| ||||||||| ||||||| ||||||||||||||||||| ||||    
T  40255 ataaaagatgacccaaaacattattttacaaaaatcacatttttcacaaaagttctcaagaacaacaaaagttcacttcaagctctatg 40343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0414 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 186 - 270
Target Start/End: Complemental strand, 11502 - 11416
Alignment:
Q  186 caacattatacttcaccaattttgagcaaaaacacaagtatacatatata--cataacttgagcatgtaaattcatcatcaacaact 270  Q
    |||||| |||||| |||||||||||||||||| |||||||||||||||||  |||||||||| ||| ||| ||||||||||||||||    
T  11502 caacatcatacttgaccaattttgagcaaaaatacaagtatacatatatatgcataacttgaacatataagttcatcatcaacaact 11416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 51; Significance: 4e-20; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 321 - 379
Target Start/End: Original strand, 67522 - 67580
Alignment:
Q  321 agtcccaatttttcccaattcaatccccaaaactgtttacagcattgctatatgattat 379  Q
    |||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  67522 agtcccaattttccccaattcaatccccaaaactgattacagcattgctatatgattat 67580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 357
Target Start/End: Original strand, 53659 - 53693
Alignment:
Q  323 tcccaatttttcccaattcaatccccaaaactgtt 357  Q
    ||||||||||||||||||||||||||||| |||||    
T  53659 tcccaatttttcccaattcaatccccaaacctgtt 53693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 263 - 327
Target Start/End: Original strand, 2857 - 2922
Alignment:
Q  263 caacaactacaatgttaaaccctttttcagaattatacaaccaatt-ttagagaaagctagtccca 327  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  2857 caacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtccca 2922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1783 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold1783
Description:

Target: scaffold1783; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 321 - 379
Target Start/End: Original strand, 1165 - 1223
Alignment:
Q  321 agtcccaatttttcccaattcaatccccaaaactgtttacagcattgctatatgattat 379  Q
    |||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||    
T  1165 agtcccaattttccccaattcaatccccaaaactgattacaacattgctatatgattat 1223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 321 - 379
Target Start/End: Original strand, 21666 - 21724
Alignment:
Q  321 agtcccaatttttcccaattcaatccccaaaactgtttacagcattgctatatgattat 379  Q
    |||||||||||| || ||||||||||||||||||| |||||||||||||||||||||||    
T  21666 agtcccaattttcccaaattcaatccccaaaactgattacagcattgctatatgattat 21724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 321 - 379
Target Start/End: Original strand, 34349 - 34407
Alignment:
Q  321 agtcccaatttttcccaattcaatccccaaaactgtttacagcattgctatatgattat 379  Q
    |||||||||||| ||||||||| |||||||||||| ||||| || ||||||||||||||    
T  34349 agtcccaattttccccaattcattccccaaaactgattacaacaatgctatatgattat 34407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 321 - 379
Target Start/End: Original strand, 105819 - 105877
Alignment:
Q  321 agtcccaatttttcccaattcaatccccaaaactgtttacagcattgctatatgattat 379  Q
    |||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||    
T  105819 agtcccaattttccccaattcaatccccaaaactgattacaacattgctatatgattat 105877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0672 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0672
Description:

Target: scaffold0672; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 321 - 379
Target Start/End: Complemental strand, 7703 - 7645
Alignment:
Q  321 agtcccaatttttcccaattcaatccccaaaactgtttacagcattgctatatgattat 379  Q
    |||||||| ||| | |||||||||||||||||||| |||||||||||||||||||||||    
T  7703 agtcccaactttcctcaattcaatccccaaaactggttacagcattgctatatgattat 7645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0607 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 321 - 379
Target Start/End: Original strand, 3625 - 3683
Alignment:
Q  321 agtcccaatttttcccaattcaatccccaaaactgtttacagcattgctatatgattat 379  Q
    |||||||||||| |||||||||||||||||| ||| ||||||||||||||||| |||||    
T  3625 agtcccaattttccccaattcaatccccaaagctgattacagcattgctatataattat 3683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 321 - 379
Target Start/End: Original strand, 9293 - 9351
Alignment:
Q  321 agtcccaatttttcccaattcaatccccaaaactgtttacagcattgctatatgattat 379  Q
    |||||||||| | |||||||||||||||||||||| ||||| |||||||||||||||||    
T  9293 agtcccaattgtccccaattcaatccccaaaactgattacaacattgctatatgattat 9351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 321 - 379
Target Start/End: Complemental strand, 3078 - 3020
Alignment:
Q  321 agtcccaatttttcccaattcaatccccaaaactgtttacagcattgctatatgattat 379  Q
    |||||||||||| | |||||||||||||||||||| ||||| |||||||||||||||||    
T  3078 agtcccaattttcctcaattcaatccccaaaactgattacaacattgctatatgattat 3020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 321 - 379
Target Start/End: Original strand, 22160 - 22218
Alignment:
Q  321 agtcccaatttttcccaattcaatccccaaaactgtttacagcattgctatatgattat 379  Q
    ||||||||||||  ||||||||||||||||||||| ||||||||||| |||||||||||    
T  22160 agtcccaattttctccaattcaatccccaaaactgattacagcattgttatatgattat 22218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 321 - 379
Target Start/End: Original strand, 68806 - 68864
Alignment:
Q  321 agtcccaatttttcccaattcaatccccaaaactgtttacagcattgctatatgattat 379  Q
    |||| ||||||| |||||||||||||||||||||| ||||| |||||||||||||||||    
T  68806 agtctcaattttccccaattcaatccccaaaactgattacaacattgctatatgattat 68864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 263 - 324
Target Start/End: Complemental strand, 14662 - 14600
Alignment:
Q  263 caacaactacaatgttaaaccctttttcagaattatacaaccaatt-ttagagaaagctagtc 324  Q
    ||||||||||||  |||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  14662 caacaactacaaatttaaaccctttttcagaattatacaacccattattagagaaagctagtc 14600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 263 - 324
Target Start/End: Complemental strand, 23720 - 23658
Alignment:
Q  263 caacaactacaatgttaaaccctttttcagaattatacaaccaatt-ttagagaaagctagtc 324  Q
    ||||||||||||  |||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  23720 caacaactacaaatttaaaccctttttcagaattatacaacccattattagagaaagctagtc 23658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 263 - 327
Target Start/End: Original strand, 2223 - 2288
Alignment:
Q  263 caacaactacaatgttaaaccctttttcagaattatacaaccaatt-ttagagaaagctagtccca 327  Q
    ||||||| || ||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||    
T  2223 caacaacaactatgttaaaccctttttcagaattatacaacccattattatagaaagctagtccca 2288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 263 - 327
Target Start/End: Original strand, 4912 - 4977
Alignment:
Q  263 caacaactacaatg-ttaaaccctttttcagaattatacaaccaattttagagaaagctagtccca 327  Q
    |||||||||||| | |||||||||||| |||||||||||||||| | |||||||||||||||||||    
T  4912 caacaactacaaaggttaaacccttttacagaattatacaaccattattagagaaagctagtccca 4977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 225 - 270
Target Start/End: Complemental strand, 17822 - 17777
Alignment:
Q  225 atacatatatacataacttgagcatgtaaattcatcatcaacaact 270  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  17822 atacatatatacataacttgagcatataaattcatcatcaacaact 17777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 263 - 325
Target Start/End: Complemental strand, 17597 - 17534
Alignment:
Q  263 caacaactacaatgttaaaccctttttcagaattatacaa-ccaattttagagaaagctagtcc 325  Q
    |||||||||||| ||||||||||||||||||||||||||| ||| | ||||| |||||||||||    
T  17597 caacaactacaaggttaaaccctttttcagaattatacaatccattattagaaaaagctagtcc 17534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 263 - 327
Target Start/End: Original strand, 13925 - 13990
Alignment:
Q  263 caacaactacaatgttaaaccctttttcagaattatacaaccaatt-ttagagaaagctagtccca 327  Q
    |||||||| ||| ||||||||||||||||||||| ||||||| ||| |||||||||||||||||||    
T  13925 caacaacttcaaggttaaaccctttttcagaattttacaacccattattagagaaagctagtccca 13990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 264 - 327
Target Start/End: Original strand, 5608 - 5674
Alignment:
Q  264 aacaactacaatgttaaaccc--tttttcagaattatacaaccaatt-ttagagaaagctagtccca 327  Q
    ||||||||||| |||||||||  |||||||||||||||||||| ||| |||||||||||||||||||    
T  5608 aacaactacaaagttaaaccctttttttcagaattatacaacccattattagagaaagctagtccca 5674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 328 - 378
Target Start/End: Original strand, 1616 - 1667
Alignment:
Q  328 atttttcccaa-ttcaatccccaaaactgtttacagcattgctatatgatta 378  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  1616 atttttcccaaattcaatccccaaaactgattacagcattgctatatgatta 1667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 321 - 379
Target Start/End: Original strand, 11478 - 11536
Alignment:
Q  321 agtcccaatttttcccaattcaatccccaaaactgtttacagcattgctatatgattat 379  Q
    |||||||||||||||||||||| |||| ||||||| ||| |||| ||||||||||||||    
T  11478 agtcccaatttttcccaattcattcccaaaaactgattatagcaatgctatatgattat 11536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 263 - 324
Target Start/End: Original strand, 1052 - 1114
Alignment:
Q  263 caacaactacaatgttaaaccctttttcagaattatacaa-ccaattttagagaaagctagtc 324  Q
    ||||| |||||| ||||||||||||||||||||||||||| ||| | ||||||||||||||||    
T  1052 caacatctacaaggttaaaccctttttcagaattatacaatccattattagagaaagctagtc 1114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 321 - 379
Target Start/End: Original strand, 51819 - 51877
Alignment:
Q  321 agtcccaatttttcccaattcaatccccaaaactgtttacagcattgctatatgattat 379  Q
    ||||| |||||| |||||||||||||||||||||| ||||| ||||| |||||||||||    
T  51819 agtcctaattttccccaattcaatccccaaaactgattacaacattgttatatgattat 51877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 59
Target Start/End: Original strand, 19410 - 19455
Alignment:
Q  14 atataaaacatgacccaaaacattaatttacaaaatcacacttttc 59  Q
    |||||| || ||||||||||||||||||||||||||||||||||||    
T  19410 atataacacttgacccaaaacattaatttacaaaatcacacttttc 19455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 270
Target Start/End: Original strand, 11120 - 11169
Alignment:
Q  221 aagtatacatatatacataacttgagcatgtaaattcatcatcaacaact 270  Q
    ||||||||||||||||| | ||||||||||||| ||||||||||||||||    
T  11120 aagtatacatatatacacatcttgagcatgtaatttcatcatcaacaact 11169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 263 - 327
Target Start/End: Original strand, 11592 - 11657
Alignment:
Q  263 caacaactacaatgttaaaccctttttcagaattatacaa-ccaattttagagaaagctagtccca 327  Q
    ||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||  ||||||||    
T  11592 caacaacaacgatgttaaaccctttttcagaattatacaacccatttttagagaaatttagtccca 11657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 327
Target Start/End: Original strand, 5445 - 5495
Alignment:
Q  278 taaaccctttttcagaattatacaac-caattttagagaaagctagtccca 327  Q
    |||||||||||||||||||||||||| || | |||||||||| ||||||||    
T  5445 taaaccctttttcagaattatacaactcattattagagaaaggtagtccca 5495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 263 - 304
Target Start/End: Original strand, 26703 - 26744
Alignment:
Q  263 caacaactacaatgttaaaccctttttcagaattatacaacc 304  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  26703 caacaactacaaagttaaaccctttttcagaattatacaacc 26744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 321 - 362
Target Start/End: Original strand, 189550 - 189591
Alignment:
Q  321 agtcccaatttttcccaattcaatccccaaaactgtttacag 362  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  189550 agtcccaatttttcccaattcaatccccaaaactgattacag 189591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 263 - 304
Target Start/End: Complemental strand, 16495 - 16454
Alignment:
Q  263 caacaactacaatgttaaaccctttttcagaattatacaacc 304  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  16495 caacaactacaaggttaaaccctttttcagaattatacaacc 16454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 263 - 327
Target Start/End: Complemental strand, 66148 - 66083
Alignment:
Q  263 caacaactacaatgttaaaccctttttcagaattatacaaccaatt-ttagagaaagctagtccca 327  Q
    ||||||| || ||||||||||||||||||||||||||||||| ||| ||| ||||| |||||||||    
T  66148 caacaacaaccatgttaaaccctttttcagaattatacaacccattattaaagaaatctagtccca 66083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 327
Target Start/End: Original strand, 111344 - 111401
Alignment:
Q  271 acaatgttaaaccctttttcagaattatacaaccaatt-ttagagaaagctagtccca 327  Q
    |||||||||||||| |||| ||||| |||||||| ||| |||||||||||||| ||||    
T  111344 acaatgttaaacccctttttagaatcatacaacccattattagagaaagctagcccca 111401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1256 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold1256
Description:

Target: scaffold1256; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 263 - 303
Target Start/End: Complemental strand, 2276 - 2236
Alignment:
Q  263 caacaactacaatgttaaaccctttttcagaattatacaac 303  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  2276 caacaactacaaggttaaaccctttttcagaattatacaac 2236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 37; Significance: 0.000000000009; HSPs: 2)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 326 - 366
Target Start/End: Original strand, 36909 - 36949
Alignment:
Q  326 caatttttcccaattcaatccccaaaactgtttacagcatt 366  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  36909 caattttccccaattcaatccccaaaactgtttacagcatt 36949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 323 - 366
Target Start/End: Original strand, 29312 - 29355
Alignment:
Q  323 tcccaatttttcccaattcaatccccaaaactgtttacagcatt 366  Q
    |||||||||| | |||||||||||||||||||||||||||||||    
T  29312 tcccaattttcctcaattcaatccccaaaactgtttacagcatt 29355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 303
Target Start/End: Original strand, 19184 - 19223
Alignment:
Q  264 aacaactacaatgttaaaccctttttcagaattatacaac 303  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  19184 aacaactacaaggttaaaccctttttcagaattatacaac 19223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 323 - 362
Target Start/End: Complemental strand, 31676 - 31637
Alignment:
Q  323 tcccaatttttcccaattcaatccccaaaactgtttacag 362  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  31676 tcccaatttttcccaattcaatccccaaaactgattacag 31637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 299
Target Start/End: Complemental strand, 59733 - 59695
Alignment:
Q  261 atcaacaactacaatgttaaaccctttttcagaattata 299  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  59733 atcaacaactacaaagttaaaccctttttcagaattata 59695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1204 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold1204
Description:

Target: scaffold1204; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 221 - 270
Target Start/End: Complemental strand, 197 - 148
Alignment:
Q  221 aagtatacatatatacataacttgagcatgtaaattcatcatcaacaact 270  Q
    ||||||||||||| |||||  |||||||||||| ||||||||||||||||    
T  197 aagtatacatataaacatatattgagcatgtaatttcatcatcaacaact 148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 321 - 362
Target Start/End: Complemental strand, 15336 - 15295
Alignment:
Q  321 agtcccaatttttcccaattcaatccccaaaactgtttacag 362  Q
    |||||||||||| |||||||||||||||||||||| ||||||    
T  15336 agtcccaattttccccaattcaatccccaaaactgattacag 15295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 263 - 323
Target Start/End: Complemental strand, 35262 - 35201
Alignment:
Q  263 caacaactacaatgttaaaccctttttcagaattatacaaccaatt-ttagagaaagctagt 323  Q
    ||||||| || |||||||||||||||| |||||||||||||| ||| |||| ||||||||||    
T  35262 caacaacaaccatgttaaacccttttttagaattatacaacccattattagggaaagctagt 35201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 321 - 361
Target Start/End: Complemental strand, 152346 - 152306
Alignment:
Q  321 agtcccaatttttcccaattcaatccccaaaactgtttaca 361  Q
    |||||||||||| |||||||||||||||||||||| |||||    
T  152346 agtcccaattttccccaattcaatccccaaaactgattaca 152306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1913 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold1913
Description:

Target: scaffold1913; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 323 - 362
Target Start/End: Original strand, 656 - 695
Alignment:
Q  323 tcccaatttttcccaattcaatccccaaaactgtttacag 362  Q
    |||| |||||||||||||||||||||||||| ||||||||    
T  656 tccccatttttcccaattcaatccccaaaacagtttacag 695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0853 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0853
Description:

Target: scaffold0853; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 285 - 327
Target Start/End: Complemental strand, 2508 - 2465
Alignment:
Q  285 tttttcagaattatacaaccaatt-ttagagaaagctagtccca 327  Q
    |||||||||||||||||||| ||| |||||||||||||||||||    
T  2508 tttttcagaattatacaacccattattagagaaagctagtccca 2465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 323 - 362
Target Start/End: Original strand, 20018 - 20057
Alignment:
Q  323 tcccaatttttcccaattcaatccccaaaactgtttacag 362  Q
    |||| |||||||||||||||||||||||||| ||||||||    
T  20018 tccccatttttcccaattcaatccccaaaacagtttacag 20057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 323 - 362
Target Start/End: Original strand, 15676 - 15715
Alignment:
Q  323 tcccaatttttcccaattcaatccccaaaactgtttacag 362  Q
    |||| |||||||||||||||||||||||||| ||||||||    
T  15676 tccccatttttcccaattcaatccccaaaacagtttacag 15715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 323 - 366
Target Start/End: Complemental strand, 1433 - 1390
Alignment:
Q  323 tcccaatttttcccaattcaatccccaaaactgtttacagcatt 366  Q
    |||||||||| ||||||||||| |||||||||||||||| ||||    
T  1433 tcccaattttccccaattcaatacccaaaactgtttacaacatt 1390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 355
Target Start/End: Original strand, 8344 - 8378
Alignment:
Q  321 agtcccaatttttcccaattcaatccccaaaactg 355  Q
    |||||||||||| ||||||||||||||||||||||    
T  8344 agtcccaattttccccaattcaatccccaaaactg 8378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 297
Target Start/End: Complemental strand, 10520 - 10487
Alignment:
Q  264 aacaactacaatgttaaaccctttttcagaatta 297  Q
    ||||||||||||||||||||||||||||| ||||    
T  10520 aacaactacaatgttaaaccctttttcaggatta 10487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 327
Target Start/End: Complemental strand, 18717 - 18651
Alignment:
Q  263 caacaactacaatgttaaaccctttttcagaatta-tacaac-caattttagagaaagctagtccca 327  Q
    |||||||||||| |||||||| ||||||| ||||| |||||| || | |||||||||||||||||||    
T  18717 caacaactacaaggttaaaccttttttcaaaattattacaactcattattagagaaagctagtccca 18651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 299
Target Start/End: Original strand, 17080 - 17118
Alignment:
Q  261 atcaacaactacaatgttaaaccctttttcagaattata 299  Q
    |||||||||||||| |||||||||||||| |||||||||    
T  17080 atcaacaactacaaagttaaaccctttttaagaattata 17118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 299
Target Start/End: Original strand, 26611 - 26649
Alignment:
Q  261 atcaacaactacaatgttaaaccctttttcagaattata 299  Q
    |||||||||||||| |||||||||||||| |||||||||    
T  26611 atcaacaactacaaagttaaaccctttttaagaattata 26649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 51
Target Start/End: Original strand, 4384 - 4421
Alignment:
Q  14 atataaaacatgacccaaaacattaatttacaaaatca 51  Q
    ||||||||| ||||||||||| ||||||||||||||||    
T  4384 atataaaacttgacccaaaacgttaatttacaaaatca 4421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0819 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0819
Description:

Target: scaffold0819; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 304
Target Start/End: Original strand, 5228 - 5269
Alignment:
Q  263 caacaactacaatgttaaaccctttttcagaattatacaacc 304  Q
    ||||||| || |||||||||||| ||||||||||||||||||    
T  5228 caacaacaaccatgttaaaccctgtttcagaattatacaacc 5269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0730 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0730
Description:

Target: scaffold0730; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 326
Target Start/End: Complemental strand, 6570 - 6517
Alignment:
Q  274 atgttaaaccctttttcagaattatacaaccaatt-ttagagaaagctagtccc 326  Q
    ||||||||||| |||||||||| |||||||| ||| |||||||||| |||||||    
T  6570 atgttaaaccccttttcagaatcatacaacccattattagagaaaggtagtccc 6517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 354
Target Start/End: Complemental strand, 26216 - 26183
Alignment:
Q  321 agtcccaatttttcccaattcaatccccaaaact 354  Q
    |||||||||||| |||||||||||||||||||||    
T  26216 agtcccaattttccccaattcaatccccaaaact 26183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 324
Target Start/End: Original strand, 6395 - 6456
Alignment:
Q  264 aacaactacaatgttaaaccctttttcagaattatacaac-caattttagagaaagctagtc 324  Q
    |||||||||||  |||| |||||||||||||||| ||||| || | ||||||||||||||||    
T  6395 aacaactacaagattaatccctttttcagaattacacaactcattattagagaaagctagtc 6456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 51
Target Start/End: Complemental strand, 3442 - 3405
Alignment:
Q  14 atataaaacatgacccaaaacattaatttacaaaatca 51  Q
    ||||||||| ||||||||||| ||||||||||||||||    
T  3442 atataaaacttgacccaaaacgttaatttacaaaatca 3405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 378
Target Start/End: Complemental strand, 11642 - 11585
Alignment:
Q  321 agtcccaatttttcccaattcaatccccaaaactgtttacagcattgctatatgatta 378  Q
    ||||||| |||| || |||||||||||||||| || ||| ||||||| ||||||||||    
T  11642 agtcccatttttcccaaattcaatccccaaaattgattatagcattgttatatgatta 11585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0562 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0562
Description:

Target: scaffold0562; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 359
Target Start/End: Complemental strand, 3091 - 3055
Alignment:
Q  323 tcccaatttttcccaattcaatccccaaaactgttta 359  Q
    ||||| |||| ||||||||||||||||||||||||||    
T  3091 tcccagttttccccaattcaatccccaaaactgttta 3055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 326 - 362
Target Start/End: Complemental strand, 2091 - 2055
Alignment:
Q  326 caatttttcccaattcaatccccaaaactgtttacag 362  Q
    ||||||| |||||||||||||||||||||| ||||||    
T  2091 caattttccccaattcaatccccaaaactgattacag 2055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University