View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21099_low_5 (Length: 327)
Name: NF21099_low_5
Description: NF21099
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21099_low_5 |
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Alignment Details
Target: chr6 (Bit Score: 284; Significance: 1e-159; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 1 - 308
Target Start/End: Original strand, 12736873 - 12737180
Alignment:
| Q |
1 |
tttaaaatgtgatagaatcaatgtacattacattaatcaaagaatttttgtttccatcaaacatcaagtagattgcacagatggcaacaacttgtgggat |
100 |
Q |
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| T |
12736873 |
tttaaaatgtgatagaatcaatgtacattacattaatcaaagaatttttgtttccatcaaacatcaagtagattgcacagatggcaacaacttgtgggat |
12736972 |
T |
|
| Q |
101 |
ggtctttttcctataactgaggtttggcaatgcatataagggaaattgatgtgtatgtttatggaaacttaatagccaagaccataacttatcataattt |
200 |
Q |
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| T |
12736973 |
ggtctttttcctaaaacttagatttggcaatggatataaggaaaattgatgtgtctgtttatggaaacttaatagccaagaccataacttatcataattt |
12737072 |
T |
|
| Q |
201 |
gagcacatgaaaaatagttccactttgcccgacaagcccttttcctgtacaaactcccttcagtgggggcattatcttaagagtgggtaaggcttggtgt |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12737073 |
gagcacatgaaaaatagttccactttgcccgacaagcccttttcctgtacaaactcccttcagtgggggcattatcttaagagtgggtaaggcttggtgt |
12737172 |
T |
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| Q |
301 |
tggtggta |
308 |
Q |
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|||||||| |
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| T |
12737173 |
tggtggta |
12737180 |
T |
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