View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2109_low_7 (Length: 358)
Name: NF2109_low_7
Description: NF2109
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2109_low_7 |
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Alignment Details
Target: chr6 (Bit Score: 327; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 327; E-Value: 0
Query Start/End: Original strand, 10 - 340
Target Start/End: Complemental strand, 10963958 - 10963628
Alignment:
| Q |
10 |
cctacgacttaaggcaaataagatggttcaagaaccatacgtaggtggatgcatgaatctattaaaaaacacaaaagagattaataggcatagaatacta |
109 |
Q |
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| T |
10963958 |
cctacgacttaaggcaaataagatggttcaagaaccatacgtaggtggatgcatgaatctattaaaaaacacaaaagagattaataggcatagaatacta |
10963859 |
T |
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| Q |
110 |
aattgaaaatctccccagaattattacaacattacgtgcctgaaccatatgtgtcattatatataactattctaaataacacacctatcattattcaagt |
209 |
Q |
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| T |
10963858 |
aattgaaaatctccccagaattattataacattacgtgcctgaaccatatgtgtcattatatataactattctaaataacacacctatcattattcaagt |
10963759 |
T |
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| Q |
210 |
ctgcaactatatttgagatgaggaaaagaattaagtatagacactaattaaccataattcatgtataatatatgcaatgtatactcagtaaatatacatc |
309 |
Q |
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| T |
10963758 |
ctgcaactatatttgagatgaggaaaagaattaagtatagacactaattaaccataattcatgtataatatatgcaatgtatactcagtaaatatacatc |
10963659 |
T |
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| Q |
310 |
taactctggtagggtggggaaatttacatct |
340 |
Q |
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| T |
10963658 |
taactctggtagggtggggaaatttacatct |
10963628 |
T |
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