View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21101_low_5 (Length: 274)
Name: NF21101_low_5
Description: NF21101
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21101_low_5 |
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Alignment Details
Target: chr1 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 20 - 259
Target Start/End: Original strand, 45783745 - 45783981
Alignment:
| Q |
20 |
cagcaatcaggacttgggttagtgttgggtgaaccaggaacaacaaatggtgcacaaacattcagattgctaagctgagttggacaagtagtttgtgcct |
119 |
Q |
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| T |
45783745 |
cagcaatcaggacttgggttagtgttgggtgaaccaggaacaacaaatggtgcacaaacattcagattgctaagctgagttggacaagtagtttgtgcct |
45783844 |
T |
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| Q |
120 |
cacccatttccattttggtccccaatgccacaaccaatacaagaaccaatgcaacttgacacctcattgatactggtcctgccatgatttttcttgttgt |
219 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
45783845 |
cacccatttccattttggtccccaatgccacaaccaatacaagaaccaatgcaacttgacacctcattgatactggtcctgccatgatttttc---ttgt |
45783941 |
T |
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| Q |
220 |
gatataatatgataagtaatatcctcaatttatagttcat |
259 |
Q |
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| T |
45783942 |
gatataatatgataagtaatatcctcaatttatagttcat |
45783981 |
T |
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