View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21103_high_11 (Length: 304)
Name: NF21103_high_11
Description: NF21103
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21103_high_11 |
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Alignment Details
Target: chr1 (Bit Score: 277; Significance: 1e-155; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 17 - 297
Target Start/End: Original strand, 29862432 - 29862712
Alignment:
| Q |
17 |
atctagaatgtgggtgtggcatgaacgacgtagtgggaggttatatatatgatattgagaggccttgcttgctaggggattaagttaattagcaatacaa |
116 |
Q |
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| T |
29862432 |
atctagaatgtgggtgtggcatgaacgacgtagtgggaggttatatatatgatattgagaggccttgcttgctaggggattaagttaattagcaatacaa |
29862531 |
T |
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| Q |
117 |
cttatataaatagatcatctactaagcaagaagacctaaatcattcattagctctatacatattcgggccttagtcacgacacattattgtccaagtcaa |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
29862532 |
cttatataaatagatcatctactaagcaagaagacctaaatcattcattagctctatacatattcgggccttagtcccgacacattattgtccaagtcaa |
29862631 |
T |
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| Q |
217 |
tccataattatacttcaataacatttttatttattattaatatggatacaatgtagaatatattaaattaagagtattatc |
297 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29862632 |
tccataattatacttcaataacatttttatttattattaatatggatacaatgtagaatatattaaattaagagtattatc |
29862712 |
T |
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