View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21103_high_19 (Length: 207)
Name: NF21103_high_19
Description: NF21103
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21103_high_19 |
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Alignment Details
Target: chr1 (Bit Score: 157; Significance: 1e-83; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 16 - 195
Target Start/End: Original strand, 50465538 - 50465724
Alignment:
| Q |
16 |
gtagcaaaacagagaggagaaaatggggtaagaaaatcaagattacaattgaaaatgttgtatagagttagtacttgatcgtgctagttgacttgtttgt |
115 |
Q |
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| T |
50465538 |
gtagcaaaatagagaggagaaaatggggtaagaaaatcaagattacaattgaaaatgttgtatagagttagtacttgatcgtgctagttgacttgtttgt |
50465637 |
T |
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| Q |
116 |
gaatggctaaaaagaat-------tagtaatacacagttgcatatccattcttttatgtacatgcataatgcattacattctgtgat |
195 |
Q |
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| T |
50465638 |
gaatggctaaaaagaattagtaagtagtaatacacagttgcatatccattcttttatgtacatgcataatgcattacattctgtgat |
50465724 |
T |
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