View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21104_low_10 (Length: 203)

Name: NF21104_low_10
Description: NF21104
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21104_low_10
NF21104_low_10
[»] chr3 (12 HSPs)
chr3 (23-133)||(14015025-14015134)
chr3 (133-176)||(47988517-47988560)
chr3 (133-176)||(47997804-47997847)
chr3 (133-176)||(48007091-48007134)
chr3 (140-179)||(50745372-50745411)
chr3 (139-176)||(11335334-11335371)
chr3 (139-176)||(32008035-32008072)
chr3 (134-175)||(37894276-37894317)
chr3 (139-176)||(51032656-51032693)
chr3 (140-176)||(30251012-30251048)
chr3 (139-175)||(48944743-48944779)
chr3 (139-175)||(49761219-49761255)
[»] chr4 (7 HSPs)
chr4 (130-176)||(22920303-22920349)
chr4 (130-176)||(22971450-22971496)
chr4 (134-176)||(1562568-1562610)
chr4 (139-176)||(3968887-3968924)
chr4 (139-176)||(29407058-29407095)
chr4 (139-176)||(40755923-40755960)
chr4 (139-175)||(32696822-32696858)
[»] chr8 (7 HSPs)
chr8 (139-176)||(35818939-35818976)
chr8 (133-175)||(67194-67236)
chr8 (139-176)||(3988907-3988944)
chr8 (139-176)||(12959940-12959977)
chr8 (139-176)||(31806301-31806338)
chr8 (139-175)||(25830279-25830315)
chr8 (134-170)||(40719681-40719717)
[»] chr5 (4 HSPs)
chr5 (129-176)||(22647593-22647640)
chr5 (126-175)||(22098244-22098293)
chr5 (139-176)||(36416094-36416131)
chr5 (139-175)||(14321988-14322024)
[»] chr1 (6 HSPs)
chr1 (130-176)||(12708083-12708129)
chr1 (130-176)||(12713537-12713583)
chr1 (130-176)||(12717628-12717674)
chr1 (139-176)||(18541083-18541120)
chr1 (139-175)||(12999855-12999891)
chr1 (139-175)||(33076121-33076157)
[»] chr7 (2 HSPs)
chr7 (139-176)||(6822554-6822591)
chr7 (139-176)||(33212044-33212081)
[»] chr2 (4 HSPs)
chr2 (139-176)||(3585628-3585665)
chr2 (134-175)||(6336249-6336290)
chr2 (139-176)||(11980653-11980690)
chr2 (139-176)||(31635842-31635879)


Alignment Details
Target: chr3 (Bit Score: 87; Significance: 7e-42; HSPs: 12)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 23 - 133
Target Start/End: Original strand, 14015025 - 14015134
Alignment:
Q  23 aagaaaagtaaaactataaatgtggaaaattagagaggggaatgagaatatatatacaccccgtacccgtacccgaagctatactccaaatcactcatca 122  Q
    |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||||||||||||| |||    
T  14015025 aagaaaagtaaaacaataaatgtggaaaattagagaggggaatg-gaatatatatacaccctgtacccgtacccgaggctatactccaaatcactcgtca 14015123  T
Q  123 ttataaattta 133  Q
    |||||||||||    
T  14015124 ttataaattta 14015134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 133 - 176
Target Start/End: Complemental strand, 47988560 - 47988517
Alignment:
Q  133 aaaagtgaaatgatatttgcacaaccattttctaacaaattttt 176  Q
    ||||||||||||||||||| ||||| |||||||||||| |||||    
T  47988560 aaaagtgaaatgatatttgtacaactattttctaacaacttttt 47988517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 133 - 176
Target Start/End: Complemental strand, 47997847 - 47997804
Alignment:
Q  133 aaaagtgaaatgatatttgcacaaccattttctaacaaattttt 176  Q
    ||||||||||||||||||| ||||| |||||||||||| |||||    
T  47997847 aaaagtgaaatgatatttgtacaactattttctaacaacttttt 47997804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 133 - 176
Target Start/End: Complemental strand, 48007134 - 48007091
Alignment:
Q  133 aaaagtgaaatgatatttgcacaaccattttctaacaaattttt 176  Q
    ||||||||||||||||||| ||||| |||||||||||| |||||    
T  48007134 aaaagtgaaatgatatttgtacaactattttctaacaacttttt 48007091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 140 - 179
Target Start/End: Original strand, 50745372 - 50745411
Alignment:
Q  140 aaatgatatttgcacaaccattttctaacaaattttttac 179  Q
    |||||||||||| |||||||||||||||||| ||||||||    
T  50745372 aaatgatatttgtacaaccattttctaacaatttttttac 50745411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 139 - 176
Target Start/End: Complemental strand, 11335371 - 11335334
Alignment:
Q  139 gaaatgatatttgcacaaccattttctaacaaattttt 176  Q
    ||||||||||||| |||||||||||||||||| |||||    
T  11335371 gaaatgatatttgtacaaccattttctaacaacttttt 11335334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 139 - 176
Target Start/End: Original strand, 32008035 - 32008072
Alignment:
Q  139 gaaatgatatttgcacaaccattttctaacaaattttt 176  Q
    ||||||||||||||||||||| |||||||||| |||||    
T  32008035 gaaatgatatttgcacaaccaatttctaacaacttttt 32008072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 134 - 175
Target Start/End: Complemental strand, 37894317 - 37894276
Alignment:
Q  134 aaagtgaaatgatatttgcacaaccattttctaacaaatttt 175  Q
    |||| ||||||||||||| |||||||||||||||||| ||||    
T  37894317 aaagagaaatgatatttgtacaaccattttctaacaactttt 37894276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 139 - 176
Target Start/End: Complemental strand, 51032693 - 51032656
Alignment:
Q  139 gaaatgatatttgcacaaccattttctaacaaattttt 176  Q
    ||||||||||||| |||||||||||||||||| |||||    
T  51032693 gaaatgatatttgtacaaccattttctaacaacttttt 51032656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 176
Target Start/End: Complemental strand, 30251048 - 30251012
Alignment:
Q  140 aaatgatatttgcacaaccattttctaacaaattttt 176  Q
    |||||||||||| |||||||||||||||||| |||||    
T  30251048 aaatgatatttgtacaaccattttctaacaatttttt 30251012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 175
Target Start/End: Complemental strand, 48944779 - 48944743
Alignment:
Q  139 gaaatgatatttgcacaaccattttctaacaaatttt 175  Q
    ||||||||||||| |||||||||||||||||| ||||    
T  48944779 gaaatgatatttgtacaaccattttctaacaactttt 48944743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 175
Target Start/End: Complemental strand, 49761255 - 49761219
Alignment:
Q  139 gaaatgatatttgcacaaccattttctaacaaatttt 175  Q
    ||||||||||||| |||||||||||||||||| ||||    
T  49761255 gaaatgatatttgtacaaccattttctaacaattttt 49761219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 35; Significance: 0.00000000007; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 130 - 176
Target Start/End: Complemental strand, 22920349 - 22920303
Alignment:
Q  130 tttaaaagtgaaatgatatttgcacaaccattttctaacaaattttt 176  Q
    |||||||| ||||||||||||||||||||| |||||||||| |||||    
T  22920349 tttaaaagagaaatgatatttgcacaaccaatttctaacaacttttt 22920303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 130 - 176
Target Start/End: Original strand, 22971450 - 22971496
Alignment:
Q  130 tttaaaagtgaaatgatatttgcacaaccattttctaacaaattttt 176  Q
    |||||||| ||||||||||||||||||||| |||||||||| |||||    
T  22971450 tttaaaagagaaatgatatttgcacaaccaatttctaacaacttttt 22971496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 176
Target Start/End: Complemental strand, 1562610 - 1562568
Alignment:
Q  134 aaagtgaaatgatatttgcacaaccattttctaacaaattttt 176  Q
    |||| ||||||||||||| |||||||||||||||||| |||||    
T  1562610 aaagagaaatgatatttgtacaaccattttctaacaacttttt 1562568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 139 - 176
Target Start/End: Original strand, 3968887 - 3968924
Alignment:
Q  139 gaaatgatatttgcacaaccattttctaacaaattttt 176  Q
    ||||||||||||| |||||||||||||||||| |||||    
T  3968887 gaaatgatatttgtacaaccattttctaacaacttttt 3968924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 139 - 176
Target Start/End: Complemental strand, 29407095 - 29407058
Alignment:
Q  139 gaaatgatatttgcacaaccattttctaacaaattttt 176  Q
    ||||||||||||| |||||||||||||||||| |||||    
T  29407095 gaaatgatatttgtacaaccattttctaacaagttttt 29407058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 139 - 176
Target Start/End: Original strand, 40755923 - 40755960
Alignment:
Q  139 gaaatgatatttgcacaaccattttctaacaaattttt 176  Q
    ||||||||||||| |||||||||||||||||| |||||    
T  40755923 gaaatgatatttgtacaaccattttctaacaatttttt 40755960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 175
Target Start/End: Complemental strand, 32696858 - 32696822
Alignment:
Q  139 gaaatgatatttgcacaaccattttctaacaaatttt 175  Q
    ||||||||||||| |||||||||||||||||| ||||    
T  32696858 gaaatgatatttgtacaaccattttctaacaactttt 32696822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 34; Significance: 0.0000000003; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 176
Target Start/End: Original strand, 35818939 - 35818976
Alignment:
Q  139 gaaatgatatttgcacaaccattttctaacaaattttt 176  Q
    |||||||||||||||||||||||||||||||| |||||    
T  35818939 gaaatgatatttgcacaaccattttctaacaatttttt 35818976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 175
Target Start/End: Complemental strand, 67236 - 67194
Alignment:
Q  133 aaaagtgaaatgatatttgcacaaccattttctaacaaatttt 175  Q
    ||||| ||||||||||||| |||||||||||||||||| ||||    
T  67236 aaaagagaaatgatatttgtacaaccattttctaacaactttt 67194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 139 - 176
Target Start/End: Original strand, 3988907 - 3988944
Alignment:
Q  139 gaaatgatatttgcacaaccattttctaacaaattttt 176  Q
    ||||||||||||| ||||||| ||||||||||||||||    
T  3988907 gaaatgatatttgtacaaccactttctaacaaattttt 3988944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 139 - 176
Target Start/End: Original strand, 12959940 - 12959977
Alignment:
Q  139 gaaatgatatttgcacaaccattttctaacaaattttt 176  Q
    ||||||||||||||||||||| |||||||||| |||||    
T  12959940 gaaatgatatttgcacaaccaatttctaacaatttttt 12959977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 139 - 176
Target Start/End: Original strand, 31806301 - 31806338
Alignment:
Q  139 gaaatgatatttgcacaaccattttctaacaaattttt 176  Q
    ||||||||||||| |||||||||||||||||| |||||    
T  31806301 gaaatgatatttgtacaaccattttctaacaatttttt 31806338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 175
Target Start/End: Complemental strand, 25830315 - 25830279
Alignment:
Q  139 gaaatgatatttgcacaaccattttctaacaaatttt 175  Q
    ||||||||||||| |||||||||||||||||| ||||    
T  25830315 gaaatgatatttgtacaaccattttctaacaactttt 25830279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 170
Target Start/End: Complemental strand, 40719717 - 40719681
Alignment:
Q  134 aaagtgaaatgatatttgcacaaccattttctaacaa 170  Q
    |||| ||||||||||||| ||||||||||||||||||    
T  40719717 aaagagaaatgatatttgtacaaccattttctaacaa 40719681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 32; Significance: 0.000000004; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 129 - 176
Target Start/End: Complemental strand, 22647640 - 22647593
Alignment:
Q  129 atttaaaagtgaaatgatatttgcacaaccattttctaacaaattttt 176  Q
    ||||| ||| ||||||||||||||||||||| |||||||||| |||||    
T  22647640 atttataagagaaatgatatttgcacaaccaatttctaacaacttttt 22647593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 175
Target Start/End: Original strand, 22098244 - 22098293
Alignment:
Q  126 taaatttaaaagtgaaatgatatttgcacaaccattttctaacaaatttt 175  Q
    ||||||| || | ||||||||||||| |||||||||||||||||| ||||    
T  22098244 taaattttaatgagaaatgatatttgtacaaccattttctaacaactttt 22098293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 139 - 176
Target Start/End: Complemental strand, 36416131 - 36416094
Alignment:
Q  139 gaaatgatatttgcacaaccattttctaacaaattttt 176  Q
    ||||||||||||| |||||||||||||||||| |||||    
T  36416131 gaaatgatatttgtacaaccattttctaacaatttttt 36416094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 175
Target Start/End: Complemental strand, 14322024 - 14321988
Alignment:
Q  139 gaaatgatatttgcacaaccattttctaacaaatttt 175  Q
    ||||||||||||| |||||||||||||||||| ||||    
T  14322024 gaaatgatatttgtacaaccattttctaacaactttt 14321988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 31; Significance: 0.00000002; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 176
Target Start/End: Original strand, 12708083 - 12708129
Alignment:
Q  130 tttaaaagtgaaatgatatttgcacaaccattttctaacaaattttt 176  Q
    |||||||| ||||||||||||| | |||||||||||||||| |||||    
T  12708083 tttaaaagagaaatgatatttgtagaaccattttctaacaacttttt 12708129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 176
Target Start/End: Original strand, 12713537 - 12713583
Alignment:
Q  130 tttaaaagtgaaatgatatttgcacaaccattttctaacaaattttt 176  Q
    |||||||| ||||||||||||| | |||||||||||||||| |||||    
T  12713537 tttaaaagagaaatgatatttgtagaaccattttctaacaacttttt 12713583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 176
Target Start/End: Original strand, 12717628 - 12717674
Alignment:
Q  130 tttaaaagtgaaatgatatttgcacaaccattttctaacaaattttt 176  Q
    |||||||| ||||||||||||| | |||||||||||||||| |||||    
T  12717628 tttaaaagagaaatgatatttgtagaaccattttctaacaacttttt 12717674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 139 - 176
Target Start/End: Complemental strand, 18541120 - 18541083
Alignment:
Q  139 gaaatgatatttgcacaaccattttctaacaaattttt 176  Q
    ||||||||||||| |||||||||||||||||| |||||    
T  18541120 gaaatgatatttgtacaaccattttctaacaacttttt 18541083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 175
Target Start/End: Complemental strand, 12999891 - 12999855
Alignment:
Q  139 gaaatgatatttgcacaaccattttctaacaaatttt 175  Q
    ||||||||||||| |||||||||||||||||| ||||    
T  12999891 gaaatgatatttgtacaaccattttctaacaactttt 12999855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 175
Target Start/End: Original strand, 33076121 - 33076157
Alignment:
Q  139 gaaatgatatttgcacaaccattttctaacaaatttt 175  Q
    ||||||||||||| |||||||||||||||||| ||||    
T  33076121 gaaatgatatttgtacaaccattttctaacaactttt 33076157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 30; Significance: 0.00000007; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 139 - 176
Target Start/End: Complemental strand, 6822591 - 6822554
Alignment:
Q  139 gaaatgatatttgcacaaccattttctaacaaattttt 176  Q
    ||||||||||||| |||||||||||||||||| |||||    
T  6822591 gaaatgatatttgtacaaccattttctaacaacttttt 6822554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 139 - 176
Target Start/End: Original strand, 33212044 - 33212081
Alignment:
Q  139 gaaatgatatttgcacaaccattttctaacaaattttt 176  Q
    ||||||||||||| |||||||||||||||||| |||||    
T  33212044 gaaatgatatttgtacaaccattttctaacaatttttt 33212081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 30; Significance: 0.00000007; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 139 - 176
Target Start/End: Original strand, 3585628 - 3585665
Alignment:
Q  139 gaaatgatatttgcacaaccattttctaacaaattttt 176  Q
    ||||||||||||||||||||| |||||||||| |||||    
T  3585628 gaaatgatatttgcacaaccaatttctaacaacttttt 3585665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 134 - 175
Target Start/End: Original strand, 6336249 - 6336290
Alignment:
Q  134 aaagtgaaatgatatttgcacaaccattttctaacaaatttt 175  Q
    |||| ||||||||||||| |||||||||||||||||| ||||    
T  6336249 aaagagaaatgatatttgtacaaccattttctaacaactttt 6336290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 139 - 176
Target Start/End: Original strand, 11980653 - 11980690
Alignment:
Q  139 gaaatgatatttgcacaaccattttctaacaaattttt 176  Q
    ||||||||||||| |||||||||||||||||| |||||    
T  11980653 gaaatgatatttgtacaaccattttctaacaacttttt 11980690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 139 - 176
Target Start/End: Complemental strand, 31635879 - 31635842
Alignment:
Q  139 gaaatgatatttgcacaaccattttctaacaaattttt 176  Q
    ||||||||||||| |||||||||||||||||| |||||    
T  31635879 gaaatgatatttgtacaaccattttctaacaacttttt 31635842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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