View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21105_high_3 (Length: 581)

Name: NF21105_high_3
Description: NF21105
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21105_high_3
NF21105_high_3
[»] chr6 (9 HSPs)
chr6 (295-448)||(24950258-24950411)
chr6 (160-222)||(24950150-24950212)
chr6 (141-198)||(17369690-17369747)
chr6 (141-222)||(20770652-20770733)
chr6 (324-381)||(6921508-6921565)
chr6 (154-198)||(6921350-6921394)
chr6 (154-198)||(6947880-6947924)
chr6 (158-222)||(14749399-14749463)
chr6 (322-372)||(6943110-6943160)
[»] chr7 (34 HSPs)
chr7 (269-376)||(24385052-24385159)
chr7 (512-574)||(24383786-24383848)
chr7 (269-389)||(24391252-24391372)
chr7 (141-222)||(660834-660915)
chr7 (152-222)||(29454101-29454171)
chr7 (141-217)||(24385208-24385284)
chr7 (141-219)||(14076683-14076761)
chr7 (141-219)||(14386711-14386789)
chr7 (144-222)||(19344565-19344643)
chr7 (141-222)||(29430988-29431069)
chr7 (141-215)||(19357919-19357993)
chr7 (152-222)||(29921991-29922061)
chr7 (141-198)||(6864794-6864851)
chr7 (332-381)||(14076550-14076599)
chr7 (332-381)||(14386578-14386627)
chr7 (142-239)||(29859439-29859536)
chr7 (141-218)||(29874517-29874594)
chr7 (135-198)||(18514768-18514831)
chr7 (155-218)||(19604464-19604527)
chr7 (141-192)||(20058044-20058095)
chr7 (163-218)||(20414888-20414943)
chr7 (155-222)||(29106816-29106883)
chr7 (154-200)||(15571895-15571941)
chr7 (156-222)||(19722020-19722086)
chr7 (152-222)||(21210479-21210549)
chr7 (156-222)||(22028630-22028696)
chr7 (141-207)||(29881273-29881339)
chr7 (156-222)||(29899376-29899442)
chr7 (143-188)||(24002235-24002280)
chr7 (143-188)||(24010419-24010464)
chr7 (512-557)||(24391081-24391126)
chr7 (157-222)||(24391416-24391481)
chr7 (141-218)||(29867242-29867319)
chr7 (509-557)||(24384862-24384910)
[»] chr4 (8 HSPs)
chr4 (145-222)||(53774842-53774919)
chr4 (152-218)||(3565750-3565816)
chr4 (152-222)||(837778-837848)
chr4 (152-198)||(3557752-3557798)
chr4 (152-198)||(3560956-3561002)
chr4 (141-222)||(11970969-11971050)
chr4 (159-222)||(35767020-35767083)
chr4 (142-218)||(53790559-53790635)
[»] chr2 (7 HSPs)
chr2 (143-222)||(18908798-18908877)
chr2 (143-222)||(18913546-18913625)
chr2 (143-222)||(18920754-18920833)
chr2 (141-221)||(14514903-14514983)
chr2 (153-222)||(25377076-25377145)
chr2 (172-222)||(10205462-10205512)
chr2 (323-381)||(20712690-20712748)
[»] chr3 (3 HSPs)
chr3 (142-218)||(3625740-3625816)
chr3 (150-222)||(25901275-25901347)
chr3 (150-222)||(25915293-25915365)
[»] chr1 (6 HSPs)
chr1 (155-221)||(4014966-4015032)
chr1 (154-222)||(4570929-4570997)
chr1 (152-218)||(39379059-39379125)
chr1 (141-222)||(4366482-4366563)
chr1 (155-222)||(21855384-21855451)
chr1 (144-222)||(10218987-10219065)
[»] chr5 (3 HSPs)
chr5 (141-222)||(28763892-28763973)
chr5 (155-222)||(24330900-24330967)
chr5 (156-235)||(29597554-29597633)
[»] scaffold0097 (1 HSPs)
scaffold0097 (323-381)||(16529-16587)
[»] chr8 (1 HSPs)
chr8 (142-192)||(27618523-27618573)
[»] scaffold0354 (1 HSPs)
scaffold0354 (142-198)||(7489-7545)


Alignment Details
Target: chr6 (Bit Score: 78; Significance: 5e-36; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 295 - 448
Target Start/End: Original strand, 24950258 - 24950411
Alignment:
Q  295 ctcaaccaacaacttttcaccagaaccttgagggggcaacaattgtgtgtatgtctcagtccccaaatcaagcgagatgatcgcaaaattctcaagggta 394  Q
    |||||||||||||  ||||  ||||||| ||||||||||||||||| |||||||||| |||| | ||||||| ||||||||||||||||||||||  |||    
T  24950258 ctcaaccaacaacccttcattagaacctcgagggggcaacaattgtctgtatgtctctgtcctcgaatcaagtgagatgatcgcaaaattctcaacagta 24950357  T
Q  395 tagttattacactcatatgtaatatcctttcgaatgaccaaccagttaatagtt 448  Q
    |  ||||| || |||||||||||||| ||||||||||||||||| |||| ||||    
T  24950358 tgattattccaatcatatgtaatatcatttcgaatgaccaaccaattaagagtt 24950411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 160 - 222
Target Start/End: Original strand, 24950150 - 24950212
Alignment:
Q  160 aattttaaggaattgactccaagactcttcaacaccaaacttcatcatcttccatataacaaa 222  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  24950150 aattttaaggaattgactccaagactcctcaactccaaacttcatcatcttccatataacaaa 24950212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 141 - 198
Target Start/End: Complemental strand, 17369747 - 17369690
Alignment:
Q  141 tttgaagagtctgataactaattttaaggaattgactccaagactcttcaacaccaaa 198  Q
    |||||||| ||||||||||||||||||| |||||| ||||||| |||||||| |||||    
T  17369747 tttgaagattctgataactaattttaagaaattgagtccaagagtcttcaactccaaa 17369690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 141 - 222
Target Start/End: Complemental strand, 20770733 - 20770652
Alignment:
Q  141 tttgaagagtctgataactaattttaaggaattgactccaagactcttcaacaccaaacttcatcatcttccatataacaaa 222  Q
    |||||||| | |||||||||||||||||||||||| |||| ||||||||||  ||||| | | |||| | ||||||||||||    
T  20770733 tttgaagattatgataactaattttaaggaattgaatccatgactcttcaattccaaattccttcatttgccatataacaaa 20770652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 324 - 381
Target Start/End: Original strand, 6921508 - 6921565
Alignment:
Q  324 gagggggcaacaattgtgtgtatgtctcagtccccaaatcaagcgagatgatcgcaaa 381  Q
    ||||| ||||||||||||| |||||||| |||||||||||||| ||||| ||| ||||    
T  6921508 gagggagcaacaattgtgtatatgtctctgtccccaaatcaagtgagatcatcacaaa 6921565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 198
Target Start/End: Original strand, 6921350 - 6921394
Alignment:
Q  154 ataactaattttaaggaattgactccaagactcttcaacaccaaa 198  Q
    |||||||||||||||||||||| ||||||| |||||||| |||||    
T  6921350 ataactaattttaaggaattgagtccaagattcttcaactccaaa 6921394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 198
Target Start/End: Original strand, 6947880 - 6947924
Alignment:
Q  154 ataactaattttaaggaattgactccaagactcttcaacaccaaa 198  Q
    |||||||||||||||||||||| ||||||| |||||||| |||||    
T  6947880 ataactaattttaaggaattgagtccaagattcttcaactccaaa 6947924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 158 - 222
Target Start/End: Complemental strand, 14749463 - 14749399
Alignment:
Q  158 ctaattttaaggaattgactccaagactcttcaacaccaaacttcatcatcttccatataacaaa 222  Q
    |||||||| ||||||||| |||||||||||| ||| ||||| | ||||||| |||||| ||||||    
T  14749463 ctaattttgaggaattgagtccaagactcttgaactccaaattccatcatcctccataaaacaaa 14749399  T

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Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 322 - 372
Target Start/End: Original strand, 6943110 - 6943160
Alignment:
Q  322 ttgagggggcaacaattgtgtgtatgtctcagtccccaaatcaagcgagat 372  Q
    ||||||| ||||||||| ||| |||||||| |||||||||||||| |||||    
T  6943110 ttgagggagcaacaattttgtatatgtctctgtccccaaatcaagtgagat 6943160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 2e-20; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 269 - 376
Target Start/End: Complemental strand, 24385159 - 24385052
Alignment:
Q  269 caattcataagcacacaaatagttggctcaaccaacaacttttcaccagaaccttgagggggcaacaattgtgtgtatgtctcagtccccaaatcaagcg 368  Q
    |||| |||||||||||||| | |||  |||  |||||||  |||| |||||||||||||||||||||||||||||||| |||| |||||||||| ||| |    
T  24385159 caatccataagcacacaaagacttgtttcattcaacaacacttcatcagaaccttgagggggcaacaattgtgtgtatttctctgtccccaaattaagtg 24385060  T
Q  369 agatgatc 376  Q
    ||||||||    
T  24385059 agatgatc 24385052  T

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Target: chr7; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 512 - 574
Target Start/End: Complemental strand, 24383848 - 24383786
Alignment:
Q  512 ggaaaacttggaacacttctccatatattatcacccaaactaaaaatccttgcatctctgctc 574  Q
    ||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||    
T  24383848 ggaaaacttggaatacttttccaaatattatcacccaaactaaaaatccttgcatctctgctc 24383786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 269 - 389
Target Start/End: Complemental strand, 24391372 - 24391252
Alignment:
Q  269 caattcataagcacacaaatagttggctcaaccaacaacttttcaccagaaccttgagggggcaacaattgtgtgtatgtctcagtccccaaatcaagcg 368  Q
    |||| ||| ||||||||||| |||| ||||  |||||||  |||||  ||| ||  |||||||||||||||||||||||||||  ||||||||||||| |    
T  24391372 caatccatgagcacacaaatggttgactcattcaacaacacttcacgggaatctctagggggcaacaattgtgtgtatgtctctatccccaaatcaagtg 24391273  T
Q  369 agatgatcgcaaaattctcaa 389  Q
    ||||||||||| ||| |||||    
T  24391272 agatgatcgcataatgctcaa 24391252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 141 - 222
Target Start/End: Original strand, 660834 - 660915
Alignment:
Q  141 tttgaagagtctgataactaattttaaggaattgactccaagactcttcaacaccaaacttcatcatcttccatataacaaa 222  Q
    |||||||| | |||||||||||||||||||||||| |||||||||||||||| | ||| | | |||||| ||||||||||||    
T  660834 tttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaa 660915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 152 - 222
Target Start/End: Original strand, 29454101 - 29454171
Alignment:
Q  152 tgataactaattttaaggaattgactccaagactcttcaacaccaaacttcatcatcttccatataacaaa 222  Q
    |||||||||||||||| ||||||| ||||||| |||||||| ||||| |||||||||  ||||||||||||    
T  29454101 tgataactaattttaaagaattgagtccaagaatcttcaactccaaatttcatcatccgccatataacaaa 29454171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 141 - 217
Target Start/End: Complemental strand, 24385284 - 24385208
Alignment:
Q  141 tttgaagagtctgataactaattttaaggaattgactccaagactcttcaacaccaaacttcatcatcttccatata 217  Q
    |||||||| | |||| |||||||||||| ||| |||||||||||| |||||| ||||| ||| ||||||||||||||    
T  24385284 tttgaagattatgatgactaattttaagaaatcgactccaagacttttcaactccaaagttcttcatcttccatata 24385208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 141 - 219
Target Start/End: Complemental strand, 14076761 - 14076683
Alignment:
Q  141 tttgaagagtctgataactaattttaaggaattgactccaagactcttcaacaccaaacttcatcatcttccatataac 219  Q
    |||||||| ||||||||||||||||||| |||||| ||||||| |||||||| ||||| | | |||| | |||||||||    
T  14076761 tttgaagattctgataactaattttaagaaattgagtccaagagtcttcaactccaaattccttcatttgccatataac 14076683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 141 - 219
Target Start/End: Complemental strand, 14386789 - 14386711
Alignment:
Q  141 tttgaagagtctgataactaattttaaggaattgactccaagactcttcaacaccaaacttcatcatcttccatataac 219  Q
    |||||||| ||||||||||||||||||| |||||| ||||||| |||||||| ||||| | | |||| | |||||||||    
T  14386789 tttgaagattctgataactaattttaagaaattgagtccaagagtcttcaactccaaattccttcatttgccatataac 14386711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 144 - 222
Target Start/End: Original strand, 19344565 - 19344643
Alignment:
Q  144 gaagagtctgataactaattttaaggaattgactccaagactcttcaacaccaaacttcatcatcttccatataacaaa 222  Q
    ||||| ||||| ||||||||||||| |||||| ||||||| | |||||| ||||| | |||||||| ||||||||||||    
T  19344565 gaagattctgaaaactaattttaagaaattgagtccaagattgttcaactccaaattccatcatctgccatataacaaa 19344643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 141 - 222
Target Start/End: Original strand, 29430988 - 29431069
Alignment:
Q  141 tttgaagagtctgataactaattttaaggaattgactccaagactcttcaacaccaaacttcatcatcttccatataacaaa 222  Q
    ||||||||  ||||||||||||||||||||||||  ||||||| |||| | | ||||| |||||||||  ||||||||||||    
T  29430988 tttgaagatcctgataactaattttaaggaattgggtccaagaatctttagccccaaatttcatcatccgccatataacaaa 29431069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 141 - 215
Target Start/End: Complemental strand, 19357993 - 19357919
Alignment:
Q  141 tttgaagagtctgataactaattttaaggaattgactccaagactcttcaacaccaaacttcatcatcttccata 215  Q
    ||||||||  |||| |||||||||| | ||||||| |||||||||||| ||| ||||| | ||||||||||||||    
T  19357993 tttgaagatcctgaaaactaatttttaagaattgagtccaagactcttgaactccaaattccatcatcttccata 19357919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 152 - 222
Target Start/End: Original strand, 29921991 - 29922061
Alignment:
Q  152 tgataactaattttaaggaattgactccaagactcttcaacaccaaacttcatcatcttccatataacaaa 222  Q
    |||||||||||| |||||||||||  |||||| |||||| | ||||| ||| |||||| ||||||||||||    
T  29921991 tgataactaattctaaggaattgagaccaagaatcttcatccccaaatttcttcatctgccatataacaaa 29922061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 141 - 198
Target Start/End: Original strand, 6864794 - 6864851
Alignment:
Q  141 tttgaagagtctgataactaattttaaggaattgactccaagactcttcaacaccaaa 198  Q
    |||||||| | ||||||||| |||||||||| ||| |||||||||||||||| |||||    
T  6864794 tttgaagattatgataactagttttaaggaactgagtccaagactcttcaactccaaa 6864851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 332 - 381
Target Start/End: Complemental strand, 14076599 - 14076550
Alignment:
Q  332 aacaattgtgtgtatgtctcagtccccaaatcaagcgagatgatcgcaaa 381  Q
    ||||||||||| ||||||||||||||||||||||| ||||| ||| ||||    
T  14076599 aacaattgtgtatatgtctcagtccccaaatcaagtgagataatcacaaa 14076550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 332 - 381
Target Start/End: Complemental strand, 14386627 - 14386578
Alignment:
Q  332 aacaattgtgtgtatgtctcagtccccaaatcaagcgagatgatcgcaaa 381  Q
    ||||||||||| ||||||||||||||||||||||| ||||| ||| ||||    
T  14386627 aacaattgtgtatatgtctcagtccccaaatcaagtgagataatcacaaa 14386578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 142 - 239
Target Start/End: Complemental strand, 29859536 - 29859439
Alignment:
Q  142 ttgaagagtctgataactaattttaaggaattgactccaagactcttcaacaccaaacttcatcatcttccatataacaaactgatcttccttgtaac 239  Q
    ||||||| | ||||||||||||||||| ||| |  ||||||| |||||||| ||||| ||| |||||| ||||||||| || | |  |||||||||||    
T  29859536 ttgaagattgtgataactaattttaagaaatggggtccaagaatcttcaactccaaatttcttcatctcccatataacgaaatcaatttccttgtaac 29859439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 141 - 218
Target Start/End: Complemental strand, 29874594 - 29874517
Alignment:
Q  141 tttgaagagtctgataactaattttaaggaattgactccaagactcttcaacaccaaacttcatcatcttccatataa 218  Q
    |||||||| | ||||||||||||||||| ||| || ||||||| |||||||| ||||| ||| |||| | ||||||||    
T  29874594 tttgaagattttgataactaattttaagtaatggagtccaagaatcttcaaccccaaatttcttcatttgccatataa 29874517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 135 - 198
Target Start/End: Original strand, 18514768 - 18514831
Alignment:
Q  135 aatttctttgaagagtctgataactaattttaaggaattgactccaagactcttcaacaccaaa 198  Q
    ||||| |||||||| ||  |||||||||||||||||||||| ||||||| | |||||| |||||    
T  18514768 aatttatttgaagattcatataactaattttaaggaattgagtccaagagttttcaactccaaa 18514831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 155 - 218
Target Start/End: Original strand, 19604464 - 19604527
Alignment:
Q  155 taactaattttaaggaattgactccaagactcttcaacaccaaacttcatcatcttccatataa 218  Q
    ||||||||||||||||||||| |||| || |||||||| ||||| | | |||||| ||||||||    
T  19604464 taactaattttaaggaattgagtccaggagtcttcaactccaaattccttcatctgccatataa 19604527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 141 - 192
Target Start/End: Original strand, 20058044 - 20058095
Alignment:
Q  141 tttgaagagtctgataactaattttaaggaattgactccaagactcttcaac 192  Q
    |||||||| | | ||||||||||||||| ||||||| |||||||||||||||    
T  20058044 tttgaagattttcataactaattttaagaaattgacaccaagactcttcaac 20058095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 218
Target Start/End: Complemental strand, 20414943 - 20414888
Alignment:
Q  163 tttaaggaattgactccaagactcttcaacaccaaacttcatcatcttccatataa 218  Q
    ||||||||||||| |||||||||  ||| | ||||| |||||||||||||||||||    
T  20414943 tttaaggaattgagtccaagacttgtcatctccaaatttcatcatcttccatataa 20414888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 155 - 222
Target Start/End: Complemental strand, 29106883 - 29106816
Alignment:
Q  155 taactaattttaaggaattgactccaagactcttcaacaccaaacttcatcatcttccatataacaaa 222  Q
    |||||||||||||  | |||| |||||||||||||||| ||||| ||| |||||| ||||| ||||||    
T  29106883 taactaattttaaaaagttgagtccaagactcttcaaccccaaatttcttcatctgccatacaacaaa 29106816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 154 - 200
Target Start/End: Original strand, 15571895 - 15571941
Alignment:
Q  154 ataactaattttaaggaattgactccaagactcttcaacaccaaact 200  Q
    ||||||||||||| ||||||||  ||||||||||||||| |||||||    
T  15571895 ataactaattttatggaattgaacccaagactcttcaactccaaact 15571941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 156 - 222
Target Start/End: Complemental strand, 19722086 - 19722020
Alignment:
Q  156 aactaattttaaggaattgactccaagactcttcaacaccaaacttcatcatcttccatataacaaa 222  Q
    |||| ||||| ||||||||| ||||||| |||| ||| ||||| | |||||||||||||| ||||||    
T  19722086 aactgattttgaggaattgagtccaagaatcttgaactccaaattccatcatcttccataaaacaaa 19722020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 152 - 222
Target Start/End: Original strand, 21210479 - 21210549
Alignment:
Q  152 tgataactaattttaaggaattgactccaagactcttcaacaccaaacttcatcatcttccatataacaaa 222  Q
    ||||| |||| |||||||||| || |||||||||  ||| | ||||||||  |||||||||||||||||||    
T  21210479 tgatagctaaatttaaggaatagagtccaagacttgtcatctccaaactttgtcatcttccatataacaaa 21210549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 156 - 222
Target Start/End: Complemental strand, 22028696 - 22028630
Alignment:
Q  156 aactaattttaaggaattgactccaagactcttcaacaccaaacttcatcatcttccatataacaaa 222  Q
    ||||||| ||||| |||||| |||||||||||||||| ||| | | | |||| ||||||||||||||    
T  22028696 aactaatcttaagtaattgagtccaagactcttcaactccataatccgtcattttccatataacaaa 22028630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 141 - 207
Target Start/End: Complemental strand, 29881339 - 29881273
Alignment:
Q  141 tttgaagagtctgataactaattttaaggaattgactccaagactcttcaacaccaaacttcatcat 207  Q
    |||||||| | || ||||||||| ||||||||||| ||||||| |||||||| ||||| ||| ||||    
T  29881339 tttgaagactatggtaactaattctaaggaattgagtccaagaatcttcaaccccaaatttcttcat 29881273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 156 - 222
Target Start/End: Complemental strand, 29899442 - 29899376
Alignment:
Q  156 aactaattttaaggaattgactccaagactcttcaacaccaaacttcatcatcttccatataacaaa 222  Q
    |||||||||| |  |||||| |||| ||||||||||| ||||| ||| |||||| ||||||||||||    
T  29899442 aactaatttttaaaaattgagtccaggactcttcaaccccaaatttcttcatctgccatataacaaa 29899376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 24002280 - 24002235
Alignment:
Q  143 tgaagagtctgataactaattttaaggaattgactccaagactctt 188  Q
    |||||| ||||||||||||| ||||| |||||| ||||||||||||    
T  24002280 tgaagattctgataactaatcttaagtaattgagtccaagactctt 24002235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 24010464 - 24010419
Alignment:
Q  143 tgaagagtctgataactaattttaaggaattgactccaagactctt 188  Q
    |||||| ||||||||||||| ||||| |||||| ||||||||||||    
T  24010464 tgaagattctgataactaatcttaagtaattgagtccaagactctt 24010419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 512 - 557
Target Start/End: Complemental strand, 24391126 - 24391081
Alignment:
Q  512 ggaaaacttggaacacttctccatatattatcacccaaactaaaaa 557  Q
    ||||||||| ||| | ||||||| ||||||||||||||||||||||    
T  24391126 ggaaaactttgaatatttctccaaatattatcacccaaactaaaaa 24391081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 157 - 222
Target Start/End: Complemental strand, 24391481 - 24391416
Alignment:
Q  157 actaattttaaggaattgactccaagactcttcaacaccaaacttcatcatcttccatataacaaa 222  Q
    |||||| ||||| |||||||||||| | | |||||| ||||| ||| |||||||||||| ||||||    
T  24391481 actaatgttaagaaattgactccaacatttttcaactccaaagttcttcatcttccataaaacaaa 24391416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 141 - 218
Target Start/End: Complemental strand, 29867319 - 29867242
Alignment:
Q  141 tttgaagagtctgataactaattttaaggaattgactccaagactcttcaacaccaaacttcatcatcttccatataa 218  Q
    |||||||| | || ||||||||| ||||||||||| ||||||| |||||||| || || ||| |||| | ||||||||    
T  29867319 tttgaagattatggtaactaattctaaggaattgagtccaagaatcttcaaccccgaatttcttcatttgccatataa 29867242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 509 - 557
Target Start/End: Complemental strand, 24384910 - 24384862
Alignment:
Q  509 tcaggaaaacttggaacacttctccatatattatcacccaaactaaaaa 557  Q
    |||||||||||| ||| ||||||||| |||| ||| |||||||||||||    
T  24384910 tcaggaaaactttgaatacttctccaaatatcatctcccaaactaaaaa 24384862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 6e-17; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 145 - 222
Target Start/End: Complemental strand, 53774919 - 53774842
Alignment:
Q  145 aagagtctgataactaattttaaggaattgactccaagactcttcaacaccaaacttcatcatcttccatataacaaa 222  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||| ||||| | | |||| | ||||||||||||    
T  53774919 aagattctgataactaattttaaggaattgagtccaagactcttcaactccaaattccttcatttgccatataacaaa 53774842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 152 - 218
Target Start/End: Complemental strand, 3565816 - 3565750
Alignment:
Q  152 tgataactaattttaaggaattgactccaagactcttcaacaccaaacttcatcatcttccatataa 218  Q
    ||||||||||||||||| |||||| |||||||||||||||| ||||| | | |||||| ||||||||    
T  3565816 tgataactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataa 3565750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 152 - 222
Target Start/End: Complemental strand, 837848 - 837778
Alignment:
Q  152 tgataactaattttaaggaattgactccaagactcttcaacaccaaacttcatcatcttccatataacaaa 222  Q
    ||||| ||||||||||  |||||| |||||||||||| ||||||||| ||| |||| | ||||||||||||    
T  837848 tgatagctaattttaaataattgaatccaagactcttgaacaccaaaattcttcatttgccatataacaaa 837778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 152 - 198
Target Start/End: Complemental strand, 3557798 - 3557752
Alignment:
Q  152 tgataactaattttaaggaattgactccaagactcttcaacaccaaa 198  Q
    ||||||||||||||||| |||||| |||||||||||||||| |||||    
T  3557798 tgataactaattttaagaaattgagtccaagactcttcaaccccaaa 3557752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 152 - 198
Target Start/End: Original strand, 3560956 - 3561002
Alignment:
Q  152 tgataactaattttaaggaattgactccaagactcttcaacaccaaa 198  Q
    ||||||||||||||||| |||||| |||||||||||||||| |||||    
T  3560956 tgataactaattttaagaaattgagtccaagactcttcaaccccaaa 3561002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 141 - 222
Target Start/End: Original strand, 11970969 - 11971050
Alignment:
Q  141 tttgaagagtctgataactaattttaaggaattgactccaagactcttcaacaccaaacttcatcatcttccatataacaaa 222  Q
    |||||||| | |||||||||||| |||| |||||| ||||||||||||| || ||||| | | |||| | ||||||||||||    
T  11970969 tttgaagattatgataactaattctaagaaattgagtccaagactcttccactccaaattccttcatttgccatataacaaa 11971050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 159 - 222
Target Start/End: Complemental strand, 35767083 - 35767020
Alignment:
Q  159 taattttaaggaattgactccaagactcttcaacaccaaacttcat-catcttccatataacaaa 222  Q
    |||||||||||| |||| |||||||||||||||| ||||| ||| | ||||||||||||||||||    
T  35767083 taattttaaggagttgaatccaagactcttcaactccaaa-ttcttccatcttccatataacaaa 35767020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 142 - 218
Target Start/End: Complemental strand, 53790635 - 53790559
Alignment:
Q  142 ttgaagagtctgataactaattttaaggaattgactccaagactcttcaacaccaaacttcatcatcttccatataa 218  Q
    ||||||| ||||| ||||||||||||| |||||| ||||||| | |||||  ||||| ||  |||||||||||||||    
T  53790635 ttgaagattctgaaaactaattttaagaaattgagtccaagattgttcaaatccaaattttgtcatcttccatataa 53790559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 9e-16; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 143 - 222
Target Start/End: Original strand, 18908798 - 18908877
Alignment:
Q  143 tgaagagtctgataactaattttaaggaattgactccaagactcttcaacaccaaacttcatcatcttccatataacaaa 222  Q
    |||||| | ||| |||||||||| ||||||||| |||||||||||| ||| ||||| | |||||||||||||||||||||    
T  18908798 tgaagattttgaaaactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaa 18908877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 143 - 222
Target Start/End: Original strand, 18913546 - 18913625
Alignment:
Q  143 tgaagagtctgataactaattttaaggaattgactccaagactcttcaacaccaaacttcatcatcttccatataacaaa 222  Q
    |||||| | ||| |||||||||| ||||||||| |||||||||||| ||| ||||| | |||||||||||||||||||||    
T  18913546 tgaagattttgaaaactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaa 18913625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 143 - 222
Target Start/End: Original strand, 18920754 - 18920833
Alignment:
Q  143 tgaagagtctgataactaattttaaggaattgactccaagactcttcaacaccaaacttcatcatcttccatataacaaa 222  Q
    |||||| | ||| |||||||||| ||||||||| |||||||||||| ||| ||||| | |||||||||||||||||||||    
T  18920754 tgaagattttgaaaactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaa 18920833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 14514983 - 14514903
Alignment:
Q  141 tttgaagagtctgataactaattttaaggaattgactccaagactcttcaacaccaaacttcat-catcttccatataacaa 221  Q
    |||||||| ||  |||||||||||||||||||||| ||||||| |||||||| ||||| ||||| ||| |||||||||||||    
T  14514983 tttgaagattcatataactaattttaaggaattgagtccaagaatcttcaactccaaa-ttcatccattttccatataacaa 14514903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 153 - 222
Target Start/End: Complemental strand, 25377145 - 25377076
Alignment:
Q  153 gataactaattttaaggaattgactccaagactcttcaacaccaaacttcatcatcttccatataacaaa 222  Q
    |||||||||||||||  |||||| |||||||||||| ||| ||||| | | ||||| |||||||||||||    
T  25377145 gataactaattttaaataattgaatccaagactcttgaactccaaaatccttcatcatccatataacaaa 25377076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 172 - 222
Target Start/End: Original strand, 10205462 - 10205512
Alignment:
Q  172 ttgactccaagactcttcaacaccaaacttcatcatcttccatataacaaa 222  Q
    |||| |||||||||||||||||||| |||   |||||||||||||||||||    
T  10205462 ttgagtccaagactcttcaacaccatactcagtcatcttccatataacaaa 10205512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 323 - 381
Target Start/End: Original strand, 20712690 - 20712748
Alignment:
Q  323 tgagggggcaacaattgtgtgtatgtctcagtccccaaatcaagcgagatgatcgcaaa 381  Q
    |||||| |||||| |||||||||||||||  |||||||||| || ||||||||| ||||    
T  20712690 tgagggagcaacatttgtgtgtatgtctccatccccaaatcgagggagatgatcacaaa 20712748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 142 - 218
Target Start/End: Complemental strand, 3625816 - 3625740
Alignment:
Q  142 ttgaagagtctgataactaattttaaggaattgactccaagactcttcaacaccaaacttcatcatcttccatataa 218  Q
    ||||||| | ||||||||||||||||| |||||| |||||||||||||||| ||||| ||| |||| | ||||||||    
T  3625816 ttgaagattttgataactaattttaagaaattgagtccaagactcttcaaccccaaatttcttcatttgccatataa 3625740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 150 - 222
Target Start/End: Original strand, 25901275 - 25901347
Alignment:
Q  150 tctgataactaattttaaggaattgactccaagactcttcaacaccaaacttcatcatcttccatataacaaa 222  Q
    |||||||||||||||| |  |||||| |||||||||||| ||| | ||| | | |||| ||||||||||||||    
T  25901275 tctgataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaa 25901347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 150 - 222
Target Start/End: Original strand, 25915293 - 25915365
Alignment:
Q  150 tctgataactaattttaaggaattgactccaagactcttcaacaccaaacttcatcatcttccatataacaaa 222  Q
    |||||||||||||||| |  |||||| |||||||||||| ||| | ||| | | |||| ||||||||||||||    
T  25915293 tctgataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaa 25915365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 155 - 221
Target Start/End: Original strand, 4014966 - 4015032
Alignment:
Q  155 taactaattttaaggaattgactccaagactcttcaacaccaaacttcatcatcttccatataacaa 221  Q
    ||||||| ||||||||||||| ||||||| |||||||| ||||| ||| |||||| |||||||||||    
T  4014966 taactaactttaaggaattgagtccaagaatcttcaaccccaaatttcttcatctgccatataacaa 4015032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 154 - 222
Target Start/End: Complemental strand, 4570997 - 4570929
Alignment:
Q  154 ataactaattttaaggaattgactccaagactcttcaacaccaaacttcatcatcttccatataacaaa 222  Q
    ||||||||||||||| |||||| ||||||| |||||||| ||||| ||| |||| | ||||||||||||    
T  4570997 ataactaattttaagcaattgagtccaagaatcttcaaccccaaatttcttcatttgccatataacaaa 4570929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 152 - 218
Target Start/End: Original strand, 39379059 - 39379125
Alignment:
Q  152 tgataactaattttaaggaattgactccaagactcttcaacaccaaacttcatcatcttccatataa 218  Q
    |||||||| |||||||| |||||| |||||||||||||||| ||||| | | |||||| ||||||||    
T  39379059 tgataactgattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataa 39379125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 141 - 222
Target Start/End: Original strand, 4366482 - 4366563
Alignment:
Q  141 tttgaagagtctgataactaattttaaggaattgactccaagactcttcaacaccaaacttcatcatcttccatataacaaa 222  Q
    |||||||| |||| ||||||| |||||| ||| || |||||||||||||||| || || ||| |||||| ||||| ||||||    
T  4366482 tttgaagattctggtaactaactttaagaaatggagtccaagactcttcaaccccgaatttcttcatctgccataaaacaaa 4366563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 155 - 222
Target Start/End: Original strand, 21855384 - 21855451
Alignment:
Q  155 taactaattttaaggaattgactccaagactcttcaacaccaaacttcatcatcttccatataacaaa 222  Q
    ||||||| |||||||| |||| ||||||| |||||||| ||||| | | |||||| ||||||||||||    
T  21855384 taactaactttaaggagttgagtccaagaatcttcaaccccaaattccttcatctcccatataacaaa 21855451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 144 - 222
Target Start/End: Complemental strand, 10219065 - 10218987
Alignment:
Q  144 gaagagtctgataactaattttaaggaattgactccaagactcttcaacaccaaacttcatcatcttccatataacaaa 222  Q
    ||||||| || |||||||||||||| |||||| ||||||| |||||||  ||||| ||| |||| | ||||| ||||||    
T  10219065 gaagagtatggtaactaattttaagtaattgagtccaagaatcttcaatcccaaatttcttcatttgccatacaacaaa 10218987  T

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Target: chr5 (Bit Score: 38; Significance: 0.000000000003; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 141 - 222
Target Start/End: Original strand, 28763892 - 28763973
Alignment:
Q  141 tttgaagagtctgataactaattttaaggaattgactccaagactcttcaacaccaaacttcatcatcttccatataacaaa 222  Q
    ||||||||  |||||| || ||||| |||||| |||||||||||| |||||| ||||| | | |||||||||||||||||||    
T  28763892 tttgaagatcctgatagctgattttgaggaatcgactccaagacttttcaactccaaattgcgtcatcttccatataacaaa 28763973  T

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Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 155 - 222
Target Start/End: Original strand, 24330900 - 24330967
Alignment:
Q  155 taactaattttaaggaattgactccaagactcttcaacaccaaacttcatcatcttccatataacaaa 222  Q
    ||||||| |||||||| |||| ||||||| |||||||| ||||| | | |||||| ||||||||||||    
T  24330900 taactaactttaaggagttgagtccaagaatcttcaaccccaaattccttcatctcccatataacaaa 24330967  T

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Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 235
Target Start/End: Original strand, 29597554 - 29597633
Alignment:
Q  156 aactaattttaaggaattgactccaagactcttcaacaccaaacttcatcatcttccatataacaaactgatcttccttg 235  Q
    |||||||||||||||||||| ||||||| | |||||| ||||| |  ||||| | |||||||||||| |||  |||||||    
T  29597554 aactaattttaaggaattgagtccaagattgttcaactccaaattcaatcatttgccatataacaaaatgagtttccttg 29597633  T

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Target: scaffold0097 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 323 - 381
Target Start/End: Original strand, 16529 - 16587
Alignment:
Q  323 tgagggggcaacaattgtgtgtatgtctcagtccccaaatcaagcgagatgatcgcaaa 381  Q
    |||||| |||||| |||||||||||||||  |||||||||| || ||||||||| ||||    
T  16529 tgagggagcaacatttgtgtgtatgtctccatccccaaatcgagggagatgatcacaaa 16587  T

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Target: chr8 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 142 - 192
Target Start/End: Complemental strand, 27618573 - 27618523
Alignment:
Q  142 ttgaagagtctgataactaattttaaggaattgactccaagactcttcaac 192  Q
    ||||||| |||||||||||| |||||| || ||| ||||||||||||||||    
T  27618573 ttgaagattctgataactaactttaagcaactgagtccaagactcttcaac 27618523  T

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Target: scaffold0354 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0354
Description:

Target: scaffold0354; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 142 - 198
Target Start/End: Complemental strand, 7545 - 7489
Alignment:
Q  142 ttgaagagtctgataactaattttaaggaattgactccaagactcttcaacaccaaa 198  Q
    ||||||| || |||| ||||||||||||||||||  ||||||||| ||||| |||||    
T  7545 ttgaagattccgatagctaattttaaggaattgaacccaagactcatcaactccaaa 7489  T

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