View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21105_low_8 (Length: 320)
Name: NF21105_low_8
Description: NF21105
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21105_low_8 |
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Alignment Details
Target: chr8 (Bit Score: 275; Significance: 1e-154; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 16 - 302
Target Start/End: Original strand, 34719205 - 34719491
Alignment:
| Q |
16 |
atgaacacgtagagtgatgggagttgatacatgaggtttatcccttcttataaggcatggagagccagcgttaatcttaatgaaaatatctccttaatcc |
115 |
Q |
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| T |
34719205 |
atgaacacgtagagtgatgggagttgatacatgaggtttatcccttcttataaggcatggagagccagcgttaatcttaatgaaaatatctccttaatcc |
34719304 |
T |
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| Q |
116 |
aattttgaacaaatggtttggtggttcttcatataaaatattgaaatatagttaaagtagtgagagtagtcttaagaaaagaaattattaatccaatcat |
215 |
Q |
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| T |
34719305 |
aattttgaacaaatggtttggtggttcttcatataaaatattgaaatgtagttaaagtggtgagagtagtcttaagaaaagaaattattaatccaatcat |
34719404 |
T |
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| Q |
216 |
taatatggggtcatatgctgatttgaaaaattggaaaagtgccgtttatgtaaccttggacttcaaaagatattgtgttgaagggtg |
302 |
Q |
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| T |
34719405 |
taatatggggtcatatgctgatttgaaaaattggaaaagtaccgtttatgtaaccttggacttcaaaagatattgtgttgaagggtg |
34719491 |
T |
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