View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21106_low_2 (Length: 281)
Name: NF21106_low_2
Description: NF21106
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21106_low_2 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 221; Significance: 1e-121; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 13 - 281
Target Start/End: Complemental strand, 10670941 - 10670674
Alignment:
| Q |
13 |
aatatggtttaatacatgagtcacatgagttttcaactagaggtttgtaaaagttgatggaggtgatattcatcttttgcttctttgattttatttatct |
112 |
Q |
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| T |
10670941 |
aatatggtttaatacatgagtcacatgagttttcaactagaggtttgtaaaagttgatggagatgatattcatcttttgcttctttggttttatttatct |
10670842 |
T |
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| Q |
113 |
tctaacacctcaaatgtttgagacatggtttaattttattcaaattttaatctctggnnnnnnnnggttagaggttttatgcatcatgtttgaagagttc |
212 |
Q |
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| T |
10670841 |
tctaacacctcaaatgtttgagacatggttt-attttattcaaattttaatctctggttttgtttggttagaggttttatgcatcatgtttgaagaattc |
10670743 |
T |
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| Q |
213 |
ataataaatgtctttggagaggcaatcaaacttaaggtataatcattgtttttaatcatgacttgaaat |
281 |
Q |
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| T |
10670742 |
aaaataaatgtctttggagaggcaatcaaacttaaggtataatcattgtttttaatcatgacttgaaat |
10670674 |
T |
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