View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21107_low_17 (Length: 366)
Name: NF21107_low_17
Description: NF21107
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21107_low_17 |
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Alignment Details
Target: chr7 (Bit Score: 302; Significance: 1e-170; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 302; E-Value: 1e-170
Query Start/End: Original strand, 20 - 355
Target Start/End: Original strand, 32861087 - 32861428
Alignment:
| Q |
20 |
ttattgttagtaacactgttttgatttcttcatggaagtgatttgagctcgcacaaggaaaatagttagaaattgcacaagctcttaaaccttctttggt |
119 |
Q |
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| T |
32861087 |
ttattgttagtaacactgttttgatttcttcatggaagtgatttgagctcgcacaaggaaaatagttagaaattgcacaagctcttaaaccttctttggt |
32861186 |
T |
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| Q |
120 |
gaaccacgaggctcatttttctgaagaaaagaaaaatctgatccagctttggtaagttctttggtgaacctctaagcttttgaaattacaaaatatttag |
219 |
Q |
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| T |
32861187 |
gaaccacgaggctcatttttctgaaaaaaagaaaaatctgatccagctttggtaaattctttggtgaacctctaagctttcgaaattacaaaatatttag |
32861286 |
T |
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| Q |
220 |
agt--cacgtaggcagtatttaccaatgatttcgtttcaaattagttttaaagttattcttggggtgcaggaattatatcatgagt----cacttatact |
313 |
Q |
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| T |
32861287 |
agtcacacgtaggcagtatttaccaatgatttcgtttcaaattagttttaaagttattcttggggtgcaggaattatatcatgagtaatacacttatact |
32861386 |
T |
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| Q |
314 |
atcttcattccagtgttggtaagttcatgccattttattcat |
355 |
Q |
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| T |
32861387 |
atcttcattccagtgttggtaagttcatgccattttattcat |
32861428 |
T |
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