View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21107_low_23 (Length: 322)
Name: NF21107_low_23
Description: NF21107
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21107_low_23 |
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Alignment Details
Target: chr7 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 24 - 305
Target Start/End: Complemental strand, 21215857 - 21215578
Alignment:
| Q |
24 |
ctattcatgtgtgtgtaaaaatatacatatatagtaagtaattcatgaactatgtatgaacaaataaaaggatacctgatcacgaaggttatcggttttg |
123 |
Q |
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| T |
21215857 |
ctattcatgtgtgtgtaaaagtatacatatatagtaagtaattcatgaactgtgtatgaaaaaataaaagga--cctgatcacgaaggttgtcagttttg |
21215760 |
T |
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| Q |
124 |
tccatcaaaacatcaatcttcacttgacgattaaggacctgcatacaaaacaaataaaattttctctcttaatctaacgatctgcggttcaaagtcggct |
223 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
21215759 |
tccatcaaaacatcaatcttcacttgacgattaaggacctgcatacaaaacaaataaaattttctctcttaatctaacgatctgcgattcaaagtcggct |
21215660 |
T |
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| Q |
224 |
ccagaggatccaatttagacatatacatacctgatcaatattttccaacataacatcttgaacttgagaaacctgagctttt |
305 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21215659 |
ccagaggatccaatttagacatatacatacctgatcaatattttccaacataacatcttgaacttgagaaacctgagctttt |
21215578 |
T |
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