View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21107_low_44 (Length: 239)

Name: NF21107_low_44
Description: NF21107
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21107_low_44
NF21107_low_44
[»] chr8 (16 HSPs)
chr8 (1-144)||(28436346-28436493)
chr8 (190-236)||(8043894-8043940)
chr8 (190-236)||(27718885-27718931)
chr8 (201-236)||(11603839-11603874)
chr8 (190-237)||(20469302-20469349)
chr8 (198-236)||(6038274-6038312)
chr8 (202-236)||(27571852-27571886)
chr8 (190-236)||(29376925-29376971)
chr8 (190-236)||(33996093-33996139)
chr8 (198-236)||(37141381-37141419)
chr8 (190-236)||(42172234-42172280)
chr8 (194-236)||(42700529-42700571)
chr8 (196-237)||(12959312-12959353)
chr8 (198-239)||(26196603-26196644)
chr8 (198-230)||(10656445-10656477)
chr8 (190-238)||(18533691-18533739)
[»] chr7 (18 HSPs)
chr7 (190-236)||(30857272-30857318)
chr7 (190-239)||(3671845-3671894)
chr7 (190-238)||(21327532-21327581)
chr7 (193-234)||(23374624-23374665)
chr7 (190-239)||(30006083-30006132)
chr7 (202-238)||(34807241-34807277)
chr7 (192-236)||(47342427-47342471)
chr7 (189-236)||(27263365-27263412)
chr7 (205-239)||(9522933-9522967)
chr7 (190-236)||(15913575-15913621)
chr7 (190-236)||(23221416-23221462)
chr7 (190-232)||(24483889-24483931)
chr7 (198-236)||(44651629-44651667)
chr7 (190-236)||(46849098-46849144)
chr7 (199-236)||(11908978-11909015)
chr7 (199-236)||(23413046-23413083)
chr7 (198-239)||(30753747-30753788)
chr7 (192-236)||(48103667-48103711)
[»] chr5 (15 HSPs)
chr5 (189-239)||(27903134-27903184)
chr5 (190-236)||(5015304-5015350)
chr5 (201-239)||(7713553-7713591)
chr5 (193-239)||(30488946-30488992)
chr5 (190-239)||(13796351-13796400)
chr5 (201-236)||(39610343-39610378)
chr5 (190-236)||(8544980-8545026)
chr5 (190-236)||(17230410-17230456)
chr5 (190-236)||(20125050-20125095)
chr5 (190-236)||(35493964-35494010)
chr5 (192-238)||(43135022-43135068)
chr5 (201-238)||(5551283-5551320)
chr5 (199-236)||(20688064-20688101)
chr5 (202-238)||(12218288-12218324)
chr5 (190-234)||(17083584-17083628)
[»] chr2 (21 HSPs)
chr2 (189-239)||(19159962-19160012)
chr2 (200-236)||(35194281-35194317)
chr2 (190-237)||(29896285-29896332)
chr2 (190-236)||(9547400-9547446)
chr2 (201-236)||(18611965-18612000)
chr2 (199-238)||(35727459-35727498)
chr2 (201-239)||(19967439-19967477)
chr2 (190-236)||(20565066-20565112)
chr2 (190-236)||(22267537-22267582)
chr2 (198-236)||(26400775-26400813)
chr2 (190-232)||(33424316-33424358)
chr2 (192-238)||(43424681-43424727)
chr2 (200-237)||(23468045-23468082)
chr2 (190-239)||(23718956-23719005)
chr2 (190-239)||(24106628-24106677)
chr2 (190-238)||(35456811-35456860)
chr2 (201-238)||(38727516-38727553)
chr2 (190-238)||(7537132-7537179)
chr2 (201-233)||(15447716-15447748)
chr2 (208-236)||(18231482-18231510)
chr2 (190-234)||(31543038-31543082)
[»] chr4 (27 HSPs)
chr4 (190-231)||(40160881-40160922)
chr4 (189-237)||(32268104-32268152)
chr4 (198-236)||(12712017-12712055)
chr4 (196-239)||(12192488-12192531)
chr4 (201-236)||(24063210-24063245)
chr4 (201-236)||(38374981-38375016)
chr4 (189-236)||(47015558-47015605)
chr4 (190-236)||(17423168-17423214)
chr4 (189-239)||(19479467-19479517)
chr4 (190-236)||(19997355-19997401)
chr4 (190-236)||(28435239-28435285)
chr4 (190-236)||(31760270-31760316)
chr4 (198-236)||(40901136-40901174)
chr4 (189-239)||(48251898-48251948)
chr4 (196-237)||(3299091-3299132)
chr4 (189-234)||(6087773-6087818)
chr4 (190-239)||(11085756-11085805)
chr4 (199-236)||(16584949-16584986)
chr4 (202-239)||(24675072-24675109)
chr4 (191-236)||(27740764-27740809)
chr4 (198-239)||(36569194-36569235)
chr4 (205-238)||(51436612-51436645)
chr4 (190-238)||(22164260-22164308)
chr4 (190-234)||(35305262-35305306)
chr4 (198-238)||(38767033-38767073)
chr4 (192-236)||(39146666-39146710)
chr4 (192-236)||(43374265-43374309)
[»] chr1 (28 HSPs)
chr1 (190-239)||(48681924-48681973)
chr1 (190-236)||(29987103-29987149)
chr1 (190-236)||(43356459-43356505)
chr1 (190-239)||(3157708-3157757)
chr1 (197-234)||(5270738-5270775)
chr1 (199-239)||(3393568-3393608)
chr1 (190-238)||(24571616-24571664)
chr1 (200-239)||(13673566-13673605)
chr1 (193-236)||(23334612-23334655)
chr1 (190-225)||(31979426-31979461)
chr1 (201-236)||(42045374-42045409)
chr1 (201-236)||(47417807-47417842)
chr1 (198-236)||(16033449-16033487)
chr1 (190-236)||(27533267-27533313)
chr1 (190-236)||(32923842-32923888)
chr1 (190-236)||(34899617-34899663)
chr1 (190-236)||(39252137-39252183)
chr1 (191-236)||(8266178-8266223)
chr1 (210-239)||(13953885-13953914)
chr1 (190-235)||(42440139-42440184)
chr1 (201-238)||(46082358-46082395)
chr1 (190-234)||(5869790-5869834)
chr1 (190-234)||(32163222-32163266)
chr1 (201-237)||(32950763-32950799)
chr1 (190-238)||(34083359-34083407)
chr1 (190-238)||(44243895-44243943)
chr1 (190-234)||(48131219-48131263)
chr1 (190-238)||(49222838-49222886)
[»] chr6 (15 HSPs)
chr6 (199-239)||(12904317-12904357)
chr6 (190-236)||(788890-788936)
chr6 (190-234)||(29680614-29680658)
chr6 (198-229)||(5954642-5954673)
chr6 (197-236)||(23635712-23635751)
chr6 (189-236)||(33542797-33542844)
chr6 (190-236)||(7082983-7083029)
chr6 (201-239)||(13496137-13496175)
chr6 (198-236)||(26356080-26356118)
chr6 (190-239)||(26548272-26548321)
chr6 (190-238)||(8138449-8138497)
chr6 (192-236)||(20744162-20744206)
chr6 (190-234)||(21236952-21236996)
chr6 (200-236)||(30579883-30579919)
chr6 (198-238)||(34701169-34701209)
[»] chr3 (22 HSPs)
chr3 (189-236)||(39779048-39779095)
chr3 (189-239)||(10840439-10840488)
chr3 (190-236)||(14030726-14030772)
chr3 (201-239)||(20612279-20612317)
chr3 (190-236)||(49975796-49975842)
chr3 (200-236)||(2078264-2078300)
chr3 (192-236)||(25955286-25955330)
chr3 (198-238)||(48517693-48517733)
chr3 (189-232)||(12141994-12142037)
chr3 (205-236)||(14741818-14741849)
chr3 (201-239)||(4668705-4668743)
chr3 (198-236)||(8238588-8238626)
chr3 (200-238)||(36690034-36690072)
chr3 (190-236)||(45727513-45727559)
chr3 (190-236)||(48022305-48022351)
chr3 (190-236)||(48234444-48234490)
chr3 (190-236)||(50037335-50037381)
chr3 (198-238)||(8913707-8913747)
chr3 (201-237)||(19880247-19880283)
chr3 (190-238)||(28430556-28430604)
chr3 (189-237)||(33223891-33223938)
chr3 (202-238)||(45334211-45334247)
[»] scaffold1149 (1 HSPs)
scaffold1149 (201-236)||(2356-2391)
[»] scaffold0006 (1 HSPs)
scaffold0006 (200-239)||(171180-171219)
[»] scaffold0350 (1 HSPs)
scaffold0350 (198-236)||(1272-1310)
[»] scaffold0334 (1 HSPs)
scaffold0334 (190-236)||(5206-5252)
[»] scaffold0016 (1 HSPs)
scaffold0016 (198-236)||(99061-99099)
[»] scaffold0122 (1 HSPs)
scaffold0122 (190-239)||(14177-14226)


Alignment Details
Target: chr8 (Bit Score: 87; Significance: 8e-42; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 28436346 - 28436493
Alignment:
Q  1 ttttaaaaatcataagagtcggtaactaaatattnnnnnnnncataatttgttgagtaattcaaatatctttgcttgcaactttaacaac----taaact 96  Q
    |||||||| |||||||||||  ||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||    ||||||    
T  28436346 ttttaaaagtcataagagtcaataactaaatattaaaaaaaacataatttgttgagtaattcaaatatctttgcttgcaactttaacaactaattaaact 28436445  T
Q  97 aatttacaacgtttgagatctatttaagagattgacacaataaatata 144  Q
    ||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  28436446 aatgtacaatgtttgagatctatttaagagattgacacaataaatata 28436493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 190 - 236
Target Start/End: Complemental strand, 8043940 - 8043894
Alignment:
Q  190 tggtggttggagtttgaactccaaaccttgcatatattatgcattgt 236  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||    
T  8043940 tggtggttggagtttgaactccgaaccttgcatatattatgcgttgt 8043894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 190 - 236
Target Start/End: Original strand, 27718885 - 27718931
Alignment:
Q  190 tggtggttggagtttgaactccaaaccttgcatatattatgcattgt 236  Q
    ||||||| ||||||||||||||  |||||||||||||||||||||||    
T  27718885 tggtggtcggagtttgaactccggaccttgcatatattatgcattgt 27718931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 201 - 236
Target Start/End: Original strand, 11603839 - 11603874
Alignment:
Q  201 gtttgaactccaaaccttgcatatattatgcattgt 236  Q
    ||||||||||| ||||||||||||||||||||||||    
T  11603839 gtttgaactcccaaccttgcatatattatgcattgt 11603874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 237
Target Start/End: Original strand, 20469302 - 20469349
Alignment:
Q  190 tggtggttggagtttgaactccaaaccttgcatatattatgcattgtt 237  Q
    |||||| ||| ||| ||||||| |||||||||||||||||||||||||    
T  20469302 tggtggctggggttcgaactccgaaccttgcatatattatgcattgtt 20469349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 236
Target Start/End: Original strand, 6038274 - 6038312
Alignment:
Q  198 ggagtttgaactccaaaccttgcatatattatgcattgt 236  Q
    ||||||||||||||| ||||| |||||||||||||||||    
T  6038274 ggagtttgaactccagaccttacatatattatgcattgt 6038312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 236
Target Start/End: Original strand, 27571852 - 27571886
Alignment:
Q  202 tttgaactccaaaccttgcatatattatgcattgt 236  Q
    ||||||| |||||||||||||||||||||||||||    
T  27571852 tttgaaccccaaaccttgcatatattatgcattgt 27571886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 236
Target Start/End: Complemental strand, 29376971 - 29376925
Alignment:
Q  190 tggtggttggagtttgaactccaaaccttgcatatattatgcattgt 236  Q
    ||||||| || |||||||||||| ||||||||||||||| |||||||    
T  29376971 tggtggtcggggtttgaactccagaccttgcatatattacgcattgt 29376925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 236
Target Start/End: Complemental strand, 33996139 - 33996093
Alignment:
Q  190 tggtggttggagtttgaactccaaaccttgcatatattatgcattgt 236  Q
    ||||||| ||||||||||| || ||| ||||||||||||||||||||    
T  33996139 tggtggtcggagtttgaaccccgaactttgcatatattatgcattgt 33996093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 236
Target Start/End: Complemental strand, 37141419 - 37141381
Alignment:
Q  198 ggagtttgaactccaaaccttgcatatattatgcattgt 236  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  37141419 ggagtttgaaccccgaaccttgcatatattatgcattgt 37141381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 236
Target Start/End: Original strand, 42172234 - 42172280
Alignment:
Q  190 tggtggttggagtttgaactccaaaccttgcatatattatgcattgt 236  Q
    |||||||||| |||||||||||  | |||||||||||||||||||||    
T  42172234 tggtggttggggtttgaactccggatcttgcatatattatgcattgt 42172280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 236
Target Start/End: Complemental strand, 42700571 - 42700529
Alignment:
Q  194 ggttggagtttgaactccaaaccttgcatatattatgcattgt 236  Q
    |||||||||||||||  || |||||||||||||||||||||||    
T  42700571 ggttggagtttgaacctcataccttgcatatattatgcattgt 42700529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 196 - 237
Target Start/End: Complemental strand, 12959353 - 12959312
Alignment:
Q  196 ttggagtttgaactccaaaccttgcatatattatgcattgtt 237  Q
    ||||||||| |||| |||||||| ||||||||||||||||||    
T  12959353 ttggagtttaaacttcaaaccttacatatattatgcattgtt 12959312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 239
Target Start/End: Original strand, 26196603 - 26196644
Alignment:
Q  198 ggagtttgaactccaaaccttgcatatattatgcattgttca 239  Q
    |||||||||||  | |||||||||||||||||||||||||||    
T  26196603 ggagtttgaaccacgaaccttgcatatattatgcattgttca 26196644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 230
Target Start/End: Complemental strand, 10656477 - 10656445
Alignment:
Q  198 ggagtttgaactccaaaccttgcatatattatg 230  Q
    ||||||||||||||| |||||||||||||||||    
T  10656477 ggagtttgaactccagaccttgcatatattatg 10656445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 238
Target Start/End: Complemental strand, 18533739 - 18533691
Alignment:
Q  190 tggtggttggagtttgaactccaaaccttgcatatattatgcattgttc 238  Q
    |||||||||| |||||||| ||  | |||||||||||||||||||||||    
T  18533739 tggtggttggggtttgaaccccggatcttgcatatattatgcattgttc 18533691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 190 - 236
Target Start/End: Complemental strand, 30857318 - 30857272
Alignment:
Q  190 tggtggttggagtttgaactccaaaccttgcatatattatgcattgt 236  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||    
T  30857318 tggtggttggggtttgaactcaaaaccttgcatatattatgcattgt 30857272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 239
Target Start/End: Complemental strand, 3671894 - 3671845
Alignment:
Q  190 tggtggttggagtttgaactccaaaccttgcatatattatgcattgttca 239  Q
    ||||||| || |||||||||||| ||||||||||||||||||||||||||    
T  3671894 tggtggtcggggtttgaactccagaccttgcatatattatgcattgttca 3671845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 238
Target Start/End: Original strand, 21327532 - 21327581
Alignment:
Q  190 tggtggttggagtttgaactccaaaccttgcatatatta-tgcattgttc 238  Q
    ||||||| ||||||||||| ||||||||||||||||||| ||||||||||    
T  21327532 tggtggtcggagtttgaaccccaaaccttgcatatattattgcattgttc 21327581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 193 - 234
Target Start/End: Original strand, 23374624 - 23374665
Alignment:
Q  193 tggttggagtttgaactccaaaccttgcatatattatgcatt 234  Q
    |||||||| ||||||||||||||||| |||||||||||||||    
T  23374624 tggttggattttgaactccaaaccttacatatattatgcatt 23374665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 239
Target Start/End: Original strand, 30006083 - 30006132
Alignment:
Q  190 tggtggttggagtttgaactccaaaccttgcatatattatgcattgttca 239  Q
    |||||||||| |||||||| |||||||||||||| |||||||||| ||||    
T  30006083 tggtggttggggtttgaaccccaaaccttgcatacattatgcattattca 30006132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 238
Target Start/End: Complemental strand, 34807277 - 34807241
Alignment:
Q  202 tttgaactccaaaccttgcatatattatgcattgttc 238  Q
    |||||| ||||||||||||||||||||||||||||||    
T  34807277 tttgaaatccaaaccttgcatatattatgcattgttc 34807241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 47342427 - 47342471
Alignment:
Q  192 gtggttggagtttgaactccaaaccttgcatatattatgcattgt 236  Q
    ||||| ||||||||||||||  |||||||||||||||||||||||    
T  47342427 gtggtcggagtttgaactccggaccttgcatatattatgcattgt 47342471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 236
Target Start/End: Complemental strand, 27263412 - 27263365
Alignment:
Q  189 atggtggttggagtttgaactccaaaccttgcatatattatgcattgt 236  Q
    ||||||| ||| ||| ||||||| ||||||||||||||||||||||||    
T  27263412 atggtggctggggttcgaactccgaaccttgcatatattatgcattgt 27263365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 239
Target Start/End: Complemental strand, 9522967 - 9522933
Alignment:
Q  205 gaactccaaaccttgcatatattatgcattgttca 239  Q
    |||| ||||||||||||||||||||||||||||||    
T  9522967 gaaccccaaaccttgcatatattatgcattgttca 9522933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 236
Target Start/End: Complemental strand, 15913621 - 15913575
Alignment:
Q  190 tggtggttggagtttgaactccaaaccttgcatatattatgcattgt 236  Q
    ||||| |||||||| |||  |||||||||||||||||||||||||||    
T  15913621 tggtgattggagttcgaaacccaaaccttgcatatattatgcattgt 15913575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 236
Target Start/End: Complemental strand, 23221462 - 23221416
Alignment:
Q  190 tggtggttggagtttgaactccaaaccttgcatatattatgcattgt 236  Q
    |||||||||||||||||||  | |||||| |||||||||||||||||    
T  23221462 tggtggttggagtttgaaccacgaaccttacatatattatgcattgt 23221416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 232
Target Start/End: Original strand, 24483889 - 24483931
Alignment:
Q  190 tggtggttggagtttgaactccaaaccttgcatatattatgca 232  Q
    ||||||||||||||||||| || ||| ||||||||||||||||    
T  24483889 tggtggttggagtttgaaccccgaactttgcatatattatgca 24483931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 236
Target Start/End: Complemental strand, 44651667 - 44651629
Alignment:
Q  198 ggagtttgaactccaaaccttgcatatattatgcattgt 236  Q
    |||||||||||| | ||||||||||||||||||||||||    
T  44651667 ggagtttgaacttcgaaccttgcatatattatgcattgt 44651629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 236
Target Start/End: Original strand, 46849098 - 46849144
Alignment:
Q  190 tggtggttggagtttgaactccaaaccttgcatatattatgcattgt 236  Q
    ||||||| || ||||||||||||||| || |||||||||||||||||    
T  46849098 tggtggtcggggtttgaactccaaactttacatatattatgcattgt 46849144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 11908978 - 11909015
Alignment:
Q  199 gagtttgaactccaaaccttgcatatattatgcattgt 236  Q
    |||||||||| ||| |||||||||||||||||||||||    
T  11908978 gagtttgaacaccagaccttgcatatattatgcattgt 11909015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 23413046 - 23413083
Alignment:
Q  199 gagtttgaactccaaaccttgcatatattatgcattgt 236  Q
    |||||||||||||  |||||||||||||||||||||||    
T  23413046 gagtttgaactcccgaccttgcatatattatgcattgt 23413083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 239
Target Start/End: Complemental strand, 30753788 - 30753747
Alignment:
Q  198 ggagtttgaactccaaaccttgcatatattatgcattgttca 239  Q
    ||||||||||||||| ||||| ||||| ||||||||||||||    
T  30753788 ggagtttgaactccagaccttacatattttatgcattgttca 30753747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 48103667 - 48103711
Alignment:
Q  192 gtggttggagtttgaactccaaaccttgcatatattatgcattgt 236  Q
    |||| |||||||||||| || |||||||||||| |||||||||||    
T  48103667 gtggctggagtttgaaccccgaaccttgcatattttatgcattgt 48103711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 189 - 239
Target Start/End: Complemental strand, 27903184 - 27903134
Alignment:
Q  189 atggtggttggagtttgaactccaaaccttgcatatattatgcattgttca 239  Q
    |||||||| ||||||||||| || |||||||||||||||||||||||||||    
T  27903184 atggtggtcggagtttgaaccccgaaccttgcatatattatgcattgttca 27903134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 190 - 236
Target Start/End: Complemental strand, 5015350 - 5015304
Alignment:
Q  190 tggtggttggagtttgaactccaaaccttgcatatattatgcattgt 236  Q
    |||||||||| ||||||||||| ||||||||||||||||| ||||||    
T  5015350 tggtggttggggtttgaactccgaaccttgcatatattattcattgt 5015304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 201 - 239
Target Start/End: Complemental strand, 7713591 - 7713553
Alignment:
Q  201 gtttgaactccaaaccttgcatatattatgcattgttca 239  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  7713591 gtttgaactccaaaccttgcatatattatgcattattca 7713553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 193 - 239
Target Start/End: Complemental strand, 30488992 - 30488946
Alignment:
Q  193 tggttggagtttgaactccaaaccttgcatatattatgcattgttca 239  Q
    |||| ||||||||||| |||||||||| |||||||||||||||||||    
T  30488992 tggtcggagtttgaaccccaaaccttgtatatattatgcattgttca 30488946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 239
Target Start/End: Complemental strand, 13796400 - 13796351
Alignment:
Q  190 tggtggttggagtttgaactccaaaccttgcatatattatgcattgttca 239  Q
    ||||||| |||||||| || ||| ||||||||||||||||||||||||||    
T  13796400 tggtggtcggagtttgtaccccagaccttgcatatattatgcattgttca 13796351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 201 - 236
Target Start/End: Original strand, 39610343 - 39610378
Alignment:
Q  201 gtttgaactccaaaccttgcatatattatgcattgt 236  Q
    ||||||||||||||| ||||||||||||||||||||    
T  39610343 gtttgaactccaaacattgcatatattatgcattgt 39610378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 236
Target Start/End: Original strand, 8544980 - 8545026
Alignment:
Q  190 tggtggttggagtttgaactccaaaccttgcatatattatgcattgt 236  Q
    ||||||| |||||| |||||||  |||||||||||||||||||||||    
T  8544980 tggtggtcggagttcgaactccggaccttgcatatattatgcattgt 8545026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 236
Target Start/End: Complemental strand, 17230456 - 17230410
Alignment:
Q  190 tggtggttggagtttgaactccaaaccttgcatatattatgcattgt 236  Q
    ||||||| |||||||||||||| || ||| |||||||||||||||||    
T  17230456 tggtggtcggagtttgaactccgaatcttacatatattatgcattgt 17230410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 236
Target Start/End: Complemental strand, 20125095 - 20125050
Alignment:
Q  190 tggtggttggagtttgaactccaaaccttgcatatattatgcattgt 236  Q
    ||||||| ||||||||||| || ||||||||||||||||||||||||    
T  20125095 tggtggtcggagtttgaac-ccgaaccttgcatatattatgcattgt 20125050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 236
Target Start/End: Original strand, 35493964 - 35494010
Alignment:
Q  190 tggtggttggagtttgaactccaaaccttgcatatattatgcattgt 236  Q
    ||||||| ||||||||||  || ||||||||||||||||||||||||    
T  35493964 tggtggtcggagtttgaatcccgaaccttgcatatattatgcattgt 35494010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 238
Target Start/End: Complemental strand, 43135068 - 43135022
Alignment:
Q  192 gtggttggagtttgaactccaaaccttgcatatattatgcattgttc 238  Q
    |||| ||| |||||||| ||||||||||||||| |||||||||||||    
T  43135068 gtggctggggtttgaaccccaaaccttgcatattttatgcattgttc 43135022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 201 - 238
Target Start/End: Original strand, 5551283 - 5551320
Alignment:
Q  201 gtttgaactccaaaccttgcatatattatgcattgttc 238  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  5551283 gtttgaaccccaaaccttgcatattttatgcattgttc 5551320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 199 - 236
Target Start/End: Complemental strand, 20688101 - 20688064
Alignment:
Q  199 gagtttgaactccaaaccttgcatatattatgcattgt 236  Q
    |||||||||||||  |||||||||||||||||||||||    
T  20688101 gagtttgaactccggaccttgcatatattatgcattgt 20688064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 238
Target Start/End: Original strand, 12218288 - 12218324
Alignment:
Q  202 tttgaactccaaaccttgcatatattatgcattgttc 238  Q
    ||||||||||| ||||||||||| |||||||||||||    
T  12218288 tttgaactccagaccttgcatattttatgcattgttc 12218324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 234
Target Start/End: Original strand, 17083584 - 17083628
Alignment:
Q  190 tggtggttggagtttgaactccaaaccttgcatatattatgcatt 234  Q
    |||||| ||| |||||||||||| ||||| |||||||||||||||    
T  17083584 tggtggctggggtttgaactccagaccttacatatattatgcatt 17083628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 189 - 239
Target Start/End: Complemental strand, 19160012 - 19159962
Alignment:
Q  189 atggtggttggagtttgaactccaaaccttgcatatattatgcattgttca 239  Q
    |||| ||| |||||||||||||| |||||||||||||||||||||||||||    
T  19160012 atggcggtcggagtttgaactccgaaccttgcatatattatgcattgttca 19159962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 200 - 236
Target Start/End: Original strand, 35194281 - 35194317
Alignment:
Q  200 agtttgaactccaaaccttgcatatattatgcattgt 236  Q
    |||||||||||||||||||||||||||||||||||||    
T  35194281 agtttgaactccaaaccttgcatatattatgcattgt 35194317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 237
Target Start/End: Original strand, 29896285 - 29896332
Alignment:
Q  190 tggtggttggagtttgaactccaaaccttgcatatattatgcattgtt 237  Q
    ||||||| || |||||||| ||||||||||||||||||||||||||||    
T  29896285 tggtggtcggggtttgaaccccaaaccttgcatatattatgcattgtt 29896332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 190 - 236
Target Start/End: Original strand, 9547400 - 9547446
Alignment:
Q  190 tggtggttggagtttgaactccaaaccttgcatatattatgcattgt 236  Q
    ||||||| || |||||||| |||||||||||||||||||||||||||    
T  9547400 tggtggtcggggtttgaaccccaaaccttgcatatattatgcattgt 9547446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 201 - 236
Target Start/End: Original strand, 18611965 - 18612000
Alignment:
Q  201 gtttgaactccaaaccttgcatatattatgcattgt 236  Q
    |||||||| |||||||||||||||||||||||||||    
T  18611965 gtttgaaccccaaaccttgcatatattatgcattgt 18612000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 199 - 238
Target Start/End: Complemental strand, 35727498 - 35727459
Alignment:
Q  199 gagtttgaactccaaaccttgcatatattatgcattgttc 238  Q
    ||||| |||| |||||||||||||||||||||||||||||    
T  35727498 gagttcgaaccccaaaccttgcatatattatgcattgttc 35727459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 239
Target Start/End: Complemental strand, 19967477 - 19967439
Alignment:
Q  201 gtttgaactccaaaccttgcatatattatgcattgttca 239  Q
    ||||||||||| ||||||||| |||||||||||||||||    
T  19967477 gtttgaactccgaaccttgcacatattatgcattgttca 19967439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 236
Target Start/End: Original strand, 20565066 - 20565112
Alignment:
Q  190 tggtggttggagtttgaactccaaaccttgcatatattatgcattgt 236  Q
    |||||||||| |||||||| ||  |||||||||||||||||||||||    
T  20565066 tggtggttggggtttgaaccccggaccttgcatatattatgcattgt 20565112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 236
Target Start/End: Complemental strand, 22267582 - 22267537
Alignment:
Q  190 tggtggttggagtttgaactccaaaccttgcatatattatgcattgt 236  Q
    ||||||| || |||||||||| |||||||||||||||||||||||||    
T  22267582 tggtggtcggggtttgaactc-aaaccttgcatatattatgcattgt 22267537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 236
Target Start/End: Complemental strand, 26400813 - 26400775
Alignment:
Q  198 ggagtttgaactccaaaccttgcatatattatgcattgt 236  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  26400813 ggagtttgaacacccaaccttgcatatattatgcattgt 26400775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 232
Target Start/End: Original strand, 33424316 - 33424358
Alignment:
Q  190 tggtggttggagtttgaactccaaaccttgcatatattatgca 232  Q
    |||||||||| ||||||||||| || |||||||||||||||||    
T  33424316 tggtggttggggtttgaactccgaatcttgcatatattatgca 33424358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 238
Target Start/End: Complemental strand, 43424727 - 43424681
Alignment:
Q  192 gtggttggagtttgaactccaaaccttgcatatattatgcattgttc 238  Q
    |||||||| ||||||||||| ||| |||||||| |||||||||||||    
T  43424727 gtggttggggtttgaactccgaactttgcatattttatgcattgttc 43424681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 200 - 237
Target Start/End: Original strand, 23468045 - 23468082
Alignment:
Q  200 agtttgaactccaaaccttgcatatattatgcattgtt 237  Q
    ||||||||| || |||||||||||||||||||||||||    
T  23468045 agtttgaacccccaaccttgcatatattatgcattgtt 23468082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 239
Target Start/End: Complemental strand, 23719005 - 23718956
Alignment:
Q  190 tggtggttggagtttgaactccaaaccttgcatatattatgcattgttca 239  Q
    ||||||| ||||||||||| ||| ||||||||||| |||||| |||||||    
T  23719005 tggtggtcggagtttgaacaccagaccttgcatattttatgcgttgttca 23718956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 239
Target Start/End: Complemental strand, 24106677 - 24106628
Alignment:
Q  190 tggtggttggagtttgaactccaaaccttgcatatattatgcattgttca 239  Q
    ||||||| ||||||||||| ||| ||||||||||| |||||| |||||||    
T  24106677 tggtggtcggagtttgaacaccagaccttgcatattttatgcgttgttca 24106628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 238
Target Start/End: Original strand, 35456811 - 35456860
Alignment:
Q  190 tggtggttggagtttgaactccaaaccttgcatatatt-atgcattgttc 238  Q
    |||||||||| |||||||| || ||||||||||||||| |||||||||||    
T  35456811 tggtggttggggtttgaaccccgaaccttgcatatattaatgcattgttc 35456860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 201 - 238
Target Start/End: Original strand, 38727516 - 38727553
Alignment:
Q  201 gtttgaactccaaaccttgcatatattatgcattgttc 238  Q
    |||||| ||||||| |||||||||||||||||||||||    
T  38727516 gtttgatctccaaaacttgcatatattatgcattgttc 38727553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 238
Target Start/End: Complemental strand, 7537179 - 7537132
Alignment:
Q  190 tggtggttggagtttgaactccaaaccttgcatatattatgcattgttc 238  Q
    |||||||||| ||| |||||||  |||||||||||||||||||||||||    
T  7537179 tggtggttggggtt-gaactccggaccttgcatatattatgcattgttc 7537132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 233
Target Start/End: Original strand, 15447716 - 15447748
Alignment:
Q  201 gtttgaactccaaaccttgcatatattatgcat 233  Q
    |||||||||||| ||||||||||||||||||||    
T  15447716 gtttgaactccagaccttgcatatattatgcat 15447748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 236
Target Start/End: Original strand, 18231482 - 18231510
Alignment:
Q  208 ctccaaaccttgcatatattatgcattgt 236  Q
    |||||||||||||||||||||||||||||    
T  18231482 ctccaaaccttgcatatattatgcattgt 18231510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 234
Target Start/End: Complemental strand, 31543082 - 31543038
Alignment:
Q  190 tggtggttggagtttgaactccaaaccttgcatatattatgcatt 234  Q
    |||||||||| |||||||| ||  |||||||||||||||||||||    
T  31543082 tggtggttggggtttgaaccccggaccttgcatatattatgcatt 31543038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000001; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 40160922 - 40160881
Alignment:
Q  190 tggtggttggagtttgaactccaaaccttgcatatattatgc 231  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  40160922 tggtggtcggagtttgaactccaaaccttgcatatattatgc 40160881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 189 - 237
Target Start/End: Complemental strand, 32268152 - 32268104
Alignment:
Q  189 atggtggttggagtttgaactccaaaccttgcatatattatgcattgtt 237  Q
    |||||||| ||||||||||| ||||||||| ||||||||||||||||||    
T  32268152 atggtggtcggagtttgaaccccaaacctttcatatattatgcattgtt 32268104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 198 - 236
Target Start/End: Original strand, 12712017 - 12712055
Alignment:
Q  198 ggagtttgaactccaaaccttgcatatattatgcattgt 236  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  12712017 ggagtttgaactccaaatcttgcatatattatgcattgt 12712055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 12192488 - 12192531
Alignment:
Q  196 ttggagtttgaactccaaaccttgcatatattatgcattgttca 239  Q
    ||||||||||||   |||||||||||||||||||||||||||||    
T  12192488 ttggagtttgaatctcaaaccttgcatatattatgcattgttca 12192531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 201 - 236
Target Start/End: Original strand, 24063210 - 24063245
Alignment:
Q  201 gtttgaactccaaaccttgcatatattatgcattgt 236  Q
    |||||||||||||| |||||||||||||||||||||    
T  24063210 gtttgaactccaaatcttgcatatattatgcattgt 24063245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 201 - 236
Target Start/End: Complemental strand, 38375016 - 38374981
Alignment:
Q  201 gtttgaactccaaaccttgcatatattatgcattgt 236  Q
    |||||||||||| |||||||||||||||||||||||    
T  38375016 gtttgaactccagaccttgcatatattatgcattgt 38374981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 236
Target Start/End: Original strand, 47015558 - 47015605
Alignment:
Q  189 atggtggttggagtttgaactccaaaccttgcatatattatgcattgt 236  Q
    |||||||| ||||||||||| ||| |||||| ||||||||||||||||    
T  47015558 atggtggtcggagtttgaaccccagaccttgtatatattatgcattgt 47015605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 236
Target Start/End: Original strand, 17423168 - 17423214
Alignment:
Q  190 tggtggttggagtttgaactccaaaccttgcatatattatgcattgt 236  Q
    |||||| |||||||||||| ||  |||||||||||||||||||||||    
T  17423168 tggtggctggagtttgaaccccggaccttgcatatattatgcattgt 17423214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 239
Target Start/End: Original strand, 19479467 - 19479517
Alignment:
Q  189 atggtggttggagtttgaactccaaaccttgcatatattatgcattgttca 239  Q
    |||||||| || |||||||| ||  ||||||||||||||||||||||||||    
T  19479467 atggtggtcggggtttgaaccccggaccttgcatatattatgcattgttca 19479517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 236
Target Start/End: Original strand, 19997355 - 19997401
Alignment:
Q  190 tggtggttggagtttgaactccaaaccttgcatatattatgcattgt 236  Q
    ||||||| ||||||||||| || ||| ||||||||||||||||||||    
T  19997355 tggtggtcggagtttgaaccccgaactttgcatatattatgcattgt 19997401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 236
Target Start/End: Original strand, 28435239 - 28435285
Alignment:
Q  190 tggtggttggagtttgaactccaaaccttgcatatattatgcattgt 236  Q
    |||||| ||| |||||||| || ||||||||||||||||||||||||    
T  28435239 tggtggctggggtttgaaccccgaaccttgcatatattatgcattgt 28435285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 236
Target Start/End: Complemental strand, 31760316 - 31760270
Alignment:
Q  190 tggtggttggagtttgaactccaaaccttgcatatattatgcattgt 236  Q
    |||||||||||||||||||||   |||||||||||||||| ||||||    
T  31760316 tggtggttggagtttgaactctggaccttgcatatattatacattgt 31760270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 236
Target Start/End: Original strand, 40901136 - 40901174
Alignment:
Q  198 ggagtttgaactccaaaccttgcatatattatgcattgt 236  Q
    ||||||||||||||  |||||||||||||||||||||||    
T  40901136 ggagtttgaactcccgaccttgcatatattatgcattgt 40901174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 239
Target Start/End: Original strand, 48251898 - 48251948
Alignment:
Q  189 atggtggttggagtttgaactccaaaccttgcatatattatgcattgttca 239  Q
    |||||||| ||| ||| |||| ||||||||||||||||||| |||||||||    
T  48251898 atggtggtcggaatttaaacttcaaaccttgcatatattatacattgttca 48251948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 196 - 237
Target Start/End: Original strand, 3299091 - 3299132
Alignment:
Q  196 ttggagtttgaactccaaaccttgcatatattatgcattgtt 237  Q
    |||| ||||||||  |||||||||||||||||||||||||||    
T  3299091 ttggggtttgaacctcaaaccttgcatatattatgcattgtt 3299132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 6087818 - 6087773
Alignment:
Q  189 atggtggttggagtttgaactccaaaccttgcatatattatgcatt 234  Q
    ||||||| ||| |||||||| ||| |||||||||||||||||||||    
T  6087818 atggtggctggggtttgaaccccagaccttgcatatattatgcatt 6087773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 239
Target Start/End: Original strand, 11085756 - 11085805
Alignment:
Q  190 tggtggttggagtttgaactccaaaccttgcatatattatgcattgttca 239  Q
    ||||||| ||||||||||   | |||||||||||||||||||||||||||    
T  11085756 tggtggtcggagtttgaatctcgaaccttgcatatattatgcattgttca 11085805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 16584949 - 16584986
Alignment:
Q  199 gagtttgaactccaaaccttgcatatattatgcattgt 236  Q
    ||||||||||||| |||||||||||| |||||||||||    
T  16584949 gagtttgaactccgaaccttgcatattttatgcattgt 16584986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 239
Target Start/End: Original strand, 24675072 - 24675109
Alignment:
Q  202 tttgaactccaaaccttgcatatattatgcattgttca 239  Q
    ||||||| ||||| ||||||||||||||||||||||||    
T  24675072 tttgaaccccaaatcttgcatatattatgcattgttca 24675109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 236
Target Start/End: Complemental strand, 27740809 - 27740764
Alignment:
Q  191 ggtggttggagtttgaactccaaaccttgcatatattatgcattgt 236  Q
    |||||| |||||| ||||||| |||||||||||| |||||||||||    
T  27740809 ggtggtcggagttcgaactccgaaccttgcatattttatgcattgt 27740764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 239
Target Start/End: Complemental strand, 36569235 - 36569194
Alignment:
Q  198 ggagtttgaactccaaaccttgcatatattatgcattgttca 239  Q
    |||||||||||||| |||||| ||||||||||||||| ||||    
T  36569235 ggagtttgaactccgaaccttacatatattatgcatttttca 36569194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 205 - 238
Target Start/End: Original strand, 51436612 - 51436645
Alignment:
Q  205 gaactccaaaccttgcatatattatgcattgttc 238  Q
    ||||||| ||||||||||||||||||||||||||    
T  51436612 gaactccgaaccttgcatatattatgcattgttc 51436645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 238
Target Start/End: Original strand, 22164260 - 22164308
Alignment:
Q  190 tggtggttggagtttgaactccaaaccttgcatatattatgcattgttc 238  Q
    ||||||| || |||||||| ||| ||||| |||||||||||||||||||    
T  22164260 tggtggtcggggtttgaaccccagaccttacatatattatgcattgttc 22164308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 234
Target Start/End: Complemental strand, 35305306 - 35305262
Alignment:
Q  190 tggtggttggagtttgaactccaaaccttgcatatattatgcatt 234  Q
    ||||||| || ||||||||| ||||||||||||||||| ||||||    
T  35305306 tggtggtcggggtttgaacttcaaaccttgcatatattgtgcatt 35305262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 238
Target Start/End: Original strand, 38767033 - 38767073
Alignment:
Q  198 ggagtttgaactccaaaccttgcatatattatgcattgttc 238  Q
    ||||||||||| ||||||||| ||||| |||||||||||||    
T  38767033 ggagtttgaaccccaaaccttacatatgttatgcattgttc 38767073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 39146710 - 39146666
Alignment:
Q  192 gtggttggagtttgaactccaaaccttgcatatattatgcattgt 236  Q
    |||| ||||||||||||||| |||||| | |||||||||||||||    
T  39146710 gtggctggagtttgaactccgaaccttacttatattatgcattgt 39146666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 43374265 - 43374309
Alignment:
Q  192 gtggttggagtttgaactccaaaccttgcatatattatgcattgt 236  Q
    ||||| || ||||||||||| |||||||||||| |||||||||||    
T  43374265 gtggtcggggtttgaactccgaaccttgcatattttatgcattgt 43374309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000001; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 239
Target Start/End: Original strand, 48681924 - 48681973
Alignment:
Q  190 tggtggttggagtttgaactccaaaccttgcatatattatgcattgttca 239  Q
    ||||||| ||||||||| |||| |||||||||||||||||||||||||||    
T  48681924 tggtggtcggagtttgagctccgaaccttgcatatattatgcattgttca 48681973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 190 - 236
Target Start/End: Original strand, 29987103 - 29987149
Alignment:
Q  190 tggtggttggagtttgaactccaaaccttgcatatattatgcattgt 236  Q
    |||||||||| ||| |||||||| |||||||||||||||||||||||    
T  29987103 tggtggttggggttcgaactccagaccttgcatatattatgcattgt 29987149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 190 - 236
Target Start/End: Complemental strand, 43356505 - 43356459
Alignment:
Q  190 tggtggttggagtttgaactccaaaccttgcatatattatgcattgt 236  Q
    ||||||| || |||||||||||||||||| |||||||||||||||||    
T  43356505 tggtggtcggggtttgaactccaaaccttacatatattatgcattgt 43356459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 239
Target Start/End: Original strand, 3157708 - 3157757
Alignment:
Q  190 tggtggttggagtttgaactccaaaccttgcatatattatgcattgttca 239  Q
    |||||||||| ||||||||  ||||||||| |||||||||||||||||||    
T  3157708 tggtggttggggtttgaacctcaaaccttgtatatattatgcattgttca 3157757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 197 - 234
Target Start/End: Original strand, 5270738 - 5270775
Alignment:
Q  197 tggagtttgaactccaaaccttgcatatattatgcatt 234  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  5270738 tggagtttgaactccaaactttgcatatattatgcatt 5270775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 199 - 239
Target Start/End: Original strand, 3393568 - 3393608
Alignment:
Q  199 gagtttgaactccaaaccttgcatatattatgcattgttca 239  Q
    ||||||||| ||| |||||||||||||||||||||||||||    
T  3393568 gagtttgaattccgaaccttgcatatattatgcattgttca 3393608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 238
Target Start/End: Original strand, 24571616 - 24571664
Alignment:
Q  190 tggtggttggagtttgaactccaaaccttgcatatattatgcattgttc 238  Q
    ||||||| ||||||||||| ||| ||||||||||||||||| |||||||    
T  24571616 tggtggtcggagtttgaaccccagaccttgcatatattatgtattgttc 24571664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 239
Target Start/End: Complemental strand, 13673605 - 13673566
Alignment:
Q  200 agtttgaactccaaaccttgcatatattatgcattgttca 239  Q
    ||||||||||||||| ||||||||| ||||||||||||||    
T  13673605 agtttgaactccaaatcttgcatattttatgcattgttca 13673566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 193 - 236
Target Start/End: Complemental strand, 23334655 - 23334612
Alignment:
Q  193 tggttggagtttgaactccaaaccttgcatatattatgcattgt 236  Q
    |||| |||||||||||| |||||||||||||| |||||||||||    
T  23334655 tggtcggagtttgaacttcaaaccttgcatattttatgcattgt 23334612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 225
Target Start/End: Original strand, 31979426 - 31979461
Alignment:
Q  190 tggtggttggagtttgaactccaaaccttgcatata 225  Q
    |||||||||| |||||||||||||||||||||||||    
T  31979426 tggtggttggggtttgaactccaaaccttgcatata 31979461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 201 - 236
Target Start/End: Original strand, 42045374 - 42045409
Alignment:
Q  201 gtttgaactccaaaccttgcatatattatgcattgt 236  Q
    |||||||||||| |||||||||||||||||||||||    
T  42045374 gtttgaactccagaccttgcatatattatgcattgt 42045409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 201 - 236
Target Start/End: Complemental strand, 47417842 - 47417807
Alignment:
Q  201 gtttgaactccaaaccttgcatatattatgcattgt 236  Q
    ||||||||||| ||||||||||||||||||||||||    
T  47417842 gtttgaactccgaaccttgcatatattatgcattgt 47417807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 236
Target Start/End: Original strand, 16033449 - 16033487
Alignment:
Q  198 ggagtttgaactccaaaccttgcatatattatgcattgt 236  Q
    ||||||||||| ||| |||||||||||||||||||||||    
T  16033449 ggagtttgaaccccagaccttgcatatattatgcattgt 16033487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 236
Target Start/End: Complemental strand, 27533313 - 27533267
Alignment:
Q  190 tggtggttggagtttgaactccaaaccttgcatatattatgcattgt 236  Q
    ||||||| || |||||||| || ||||||||||||||||||||||||    
T  27533313 tggtggtcggggtttgaaccccgaaccttgcatatattatgcattgt 27533267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 236
Target Start/End: Complemental strand, 32923888 - 32923842
Alignment:
Q  190 tggtggttggagtttgaactccaaaccttgcatatattatgcattgt 236  Q
    ||||||| |||||||||||| || ||||| |||||||||||||||||    
T  32923888 tggtggtcggagtttgaacttcagacctttcatatattatgcattgt 32923842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 236
Target Start/End: Original strand, 34899617 - 34899663
Alignment:
Q  190 tggtggttggagtttgaactccaaaccttgcatatattatgcattgt 236  Q
    ||||||| ||||||||||| |||||| |||||||||||||| |||||    
T  34899617 tggtggtcggagtttgaaccccaaactttgcatatattatgtattgt 34899663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 236
Target Start/End: Original strand, 39252137 - 39252183
Alignment:
Q  190 tggtggttggagtttgaactccaaaccttgcatatattatgcattgt 236  Q
    ||||||||||||||||||| ||  ||||||||||||||||| |||||    
T  39252137 tggtggttggagtttgaaccccggaccttgcatatattatgtattgt 39252183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 236
Target Start/End: Original strand, 8266178 - 8266223
Alignment:
Q  191 ggtggttggagtttgaactccaaaccttgcatatattatgcattgt 236  Q
    |||||||||| |||||||  ||||||||||||| ||||||||||||    
T  8266178 ggtggttggattttgaacctcaaaccttgcatacattatgcattgt 8266223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 210 - 239
Target Start/End: Original strand, 13953885 - 13953914
Alignment:
Q  210 ccaaaccttgcatatattatgcattgttca 239  Q
    ||||||||||||||||||||||||||||||    
T  13953885 ccaaaccttgcatatattatgcattgttca 13953914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 42440139 - 42440184
Alignment:
Q  190 tggtggttggagtttgaactccaaaccttgcatatattatgcattg 235  Q
    |||||||| | |||||||||||| ||||| ||||||||||||||||    
T  42440139 tggtggttagggtttgaactccagaccttacatatattatgcattg 42440184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 201 - 238
Target Start/End: Complemental strand, 46082395 - 46082358
Alignment:
Q  201 gtttgaactccaaaccttgcatatattatgcattgttc 238  Q
    ||||||| |||||||||| |||||||||||||||||||    
T  46082395 gtttgaattccaaaccttacatatattatgcattgttc 46082358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 234
Target Start/End: Complemental strand, 5869834 - 5869790
Alignment:
Q  190 tggtggttggagtttgaactccaaaccttgcatatattatgcatt 234  Q
    ||||||| || ||||||||||| || |||||||||||||||||||    
T  5869834 tggtggtcggggtttgaactccgaatcttgcatatattatgcatt 5869790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 234
Target Start/End: Complemental strand, 32163266 - 32163222
Alignment:
Q  190 tggtggttggagtttgaactccaaaccttgcatatattatgcatt 234  Q
    |||||| ||| |||| |||||||||| ||||||||||||||||||    
T  32163266 tggtggctggggtttcaactccaaactttgcatatattatgcatt 32163222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 237
Target Start/End: Original strand, 32950763 - 32950799
Alignment:
Q  201 gtttgaactccaaaccttgcatatattatgcattgtt 237  Q
    |||||||||||  ||||||||||||||||||||||||    
T  32950763 gtttgaactccggaccttgcatatattatgcattgtt 32950799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 238
Target Start/End: Complemental strand, 34083407 - 34083359
Alignment:
Q  190 tggtggttggagtttgaactccaaaccttgcatatattatgcattgttc 238  Q
    |||||| ||| ||| |||| ||||||||| |||||||||||||||||||    
T  34083407 tggtggctggggttcgaaccccaaaccttacatatattatgcattgttc 34083359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 238
Target Start/End: Complemental strand, 44243943 - 44243895
Alignment:
Q  190 tggtggttggagtttgaactccaaaccttgcatatattatgcattgttc 238  Q
    |||||||||| ||||||||||   ||||| |||||||||||||||||||    
T  44243943 tggtggttggggtttgaactctggaccttacatatattatgcattgttc 44243895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 234
Target Start/End: Original strand, 48131219 - 48131263
Alignment:
Q  190 tggtggttggagtttgaactccaaaccttgcatatattatgcatt 234  Q
    |||||||  |||||||||||||| ||||| |||||||||||||||    
T  48131219 tggtggtcagagtttgaactccagaccttacatatattatgcatt 48131263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 238
Target Start/End: Complemental strand, 49222886 - 49222838
Alignment:
Q  190 tggtggttggagtttgaactccaaaccttgcatatattatgcattgttc 238  Q
    |||||| |||||||||||| ||  |||||||||||||| ||||||||||    
T  49222886 tggtggctggagtttgaaccccggaccttgcatatattgtgcattgttc 49222838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.000000000005; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 199 - 239
Target Start/End: Original strand, 12904317 - 12904357
Alignment:
Q  199 gagtttgaactccaaaccttgcatatattatgcattgttca 239  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  12904317 gagtttgaactccgaaccttgcatatattatgcattgttca 12904357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 190 - 236
Target Start/End: Complemental strand, 788936 - 788890
Alignment:
Q  190 tggtggttggagtttgaactccaaaccttgcatatattatgcattgt 236  Q
    ||||||| || ||||||||||| ||||||||||||||||||||||||    
T  788936 tggtggtcggggtttgaactccgaaccttgcatatattatgcattgt 788890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 234
Target Start/End: Complemental strand, 29680658 - 29680614
Alignment:
Q  190 tggtggttggagtttgaactccaaaccttgcatatattatgcatt 234  Q
    ||||||| ||||||||||| || ||||||||||||||||||||||    
T  29680658 tggtggtcggagtttgaacaccgaaccttgcatatattatgcatt 29680614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 198 - 229
Target Start/End: Complemental strand, 5954673 - 5954642
Alignment:
Q  198 ggagtttgaactccaaaccttgcatatattat 229  Q
    ||||||||||||||||||||||||||||||||    
T  5954673 ggagtttgaactccaaaccttgcatatattat 5954642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 197 - 236
Target Start/End: Original strand, 23635712 - 23635751
Alignment:
Q  197 tggagtttgaactccaaaccttgcatatattatgcattgt 236  Q
    ||||||||||||||| |||||| |||||||||||||||||    
T  23635712 tggagtttgaactccgaaccttacatatattatgcattgt 23635751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 236
Target Start/End: Original strand, 33542797 - 33542844
Alignment:
Q  189 atggtggttggagtttgaactccaaaccttgcatatattatgcattgt 236  Q
    |||||||| ||||||||||||   ||||||||||||||||||||||||    
T  33542797 atggtggtcggagtttgaactatgaaccttgcatatattatgcattgt 33542844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 236
Target Start/End: Original strand, 7082983 - 7083029
Alignment:
Q  190 tggtggttggagtttgaactccaaaccttgcatatattatgcattgt 236  Q
    |||||| ||| |||||||||||| | |||||||||||||||||||||    
T  7082983 tggtggctggggtttgaactccagatcttgcatatattatgcattgt 7083029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 239
Target Start/End: Complemental strand, 13496175 - 13496137
Alignment:
Q  201 gtttgaactccaaaccttgcatatattatgcattgttca 239  Q
    |||||||||||  ||||||||||||||||||||||||||    
T  13496175 gtttgaactccggaccttgcatatattatgcattgttca 13496137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 236
Target Start/End: Original strand, 26356080 - 26356118
Alignment:
Q  198 ggagtttgaactccaaaccttgcatatattatgcattgt 236  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  26356080 ggagtttgaaccccgaaccttgcatatattatgcattgt 26356118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 239
Target Start/End: Complemental strand, 26548321 - 26548272
Alignment:
Q  190 tggtggttggagtttgaactccaaaccttgcatatattatgcattgttca 239  Q
    |||||| ||| |||||||| || ||||||||||||||||| |||||||||    
T  26548321 tggtggctggggtttgaaccccgaaccttgcatatattatacattgttca 26548272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 238
Target Start/End: Original strand, 8138449 - 8138497
Alignment:
Q  190 tggtggttggagtttgaactccaaaccttgcatatattatgcattgttc 238  Q
    |||||||||  |||||||| ||| ||||| |||||||||||||||||||    
T  8138449 tggtggttgaggtttgaaccccagaccttacatatattatgcattgttc 8138497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 20744206 - 20744162
Alignment:
Q  192 gtggttggagtttgaactccaaaccttgcatatattatgcattgt 236  Q
    ||||| || |||||||| ||| |||||||||||||||||||||||    
T  20744206 gtggtcggggtttgaaccccagaccttgcatatattatgcattgt 20744162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 234
Target Start/End: Original strand, 21236952 - 21236996
Alignment:
Q  190 tggtggttggagtttgaactccaaaccttgcatatattatgcatt 234  Q
    ||||| |||| ||||||||| |||||||||||| |||||||||||    
T  21236952 tggtgattggggtttgaacttcaaaccttgcatgtattatgcatt 21236996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 236
Target Start/End: Complemental strand, 30579919 - 30579883
Alignment:
Q  200 agtttgaactccaaaccttgcatatattatgcattgt 236  Q
    ||||||||| ||||||||||||||| |||||||||||    
T  30579919 agtttgaaccccaaaccttgcatattttatgcattgt 30579883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 238
Target Start/End: Complemental strand, 34701209 - 34701169
Alignment:
Q  198 ggagtttgaactccaaaccttgcatatattatgcattgttc 238  Q
    |||||||||||  || |||||||||||||||||||||||||    
T  34701209 ggagtttgaacctcagaccttgcatatattatgcattgttc 34701169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000002; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 236
Target Start/End: Complemental strand, 39779095 - 39779048
Alignment:
Q  189 atggtggttggagtttgaactccaaaccttgcatatattatgcattgt 236  Q
    ||||||||||| |||||||| || ||||||||||||||||||||||||    
T  39779095 atggtggttggggtttgaaccccgaaccttgcatatattatgcattgt 39779048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 189 - 239
Target Start/End: Complemental strand, 10840488 - 10840439
Alignment:
Q  189 atggtggttggagtttgaactccaaaccttgcatatattatgcattgttca 239  Q
    |||||||| | ||||||||||||||||||| ||||||||||||||||||||    
T  10840488 atggtggtcgaagtttgaactccaaacctt-catatattatgcattgttca 10840439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 190 - 236
Target Start/End: Original strand, 14030726 - 14030772
Alignment:
Q  190 tggtggttggagtttgaactccaaaccttgcatatattatgcattgt 236  Q
    ||||||| || ||||||||||||||||||||||||||||||| ||||    
T  14030726 tggtggtcggggtttgaactccaaaccttgcatatattatgcgttgt 14030772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 201 - 239
Target Start/End: Original strand, 20612279 - 20612317
Alignment:
Q  201 gtttgaactccaaaccttgcatatattatgcattgttca 239  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  20612279 gtttgaaccccaaaccttgcatatattatgcattgttca 20612317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 190 - 236
Target Start/End: Original strand, 49975796 - 49975842
Alignment:
Q  190 tggtggttggagtttgaactccaaaccttgcatatattatgcattgt 236  Q
    ||||||||| ||||||||| ||| |||||||||||||||||||||||    
T  49975796 tggtggttgaagtttgaaccccagaccttgcatatattatgcattgt 49975842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 236
Target Start/End: Complemental strand, 2078300 - 2078264
Alignment:
Q  200 agtttgaactccaaaccttgcatatattatgcattgt 236  Q
    ||||||||| |||||||||||||||||||||||||||    
T  2078300 agtttgaaccccaaaccttgcatatattatgcattgt 2078264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 25955286 - 25955330
Alignment:
Q  192 gtggttggagtttgaactccaaaccttgcatatattatgcattgt 236  Q
    ||||| ||||||||||||||||||||||||| | |||||||||||    
T  25955286 gtggtcggagtttgaactccaaaccttgcatgttttatgcattgt 25955330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 198 - 238
Target Start/End: Complemental strand, 48517733 - 48517693
Alignment:
Q  198 ggagtttgaactccaaaccttgcatatattatgcattgttc 238  Q
    |||||||||||||| ||||||| ||||||||||||||||||    
T  48517733 ggagtttgaactccgaaccttgtatatattatgcattgttc 48517693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 232
Target Start/End: Original strand, 12141994 - 12142037
Alignment:
Q  189 atggtggttggagtttgaactccaaaccttgcatatattatgca 232  Q
    |||||| | ||||||||||||| |||||||||||||||||||||    
T  12141994 atggtgatcggagtttgaactcaaaaccttgcatatattatgca 12142037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 205 - 236
Target Start/End: Complemental strand, 14741849 - 14741818
Alignment:
Q  205 gaactccaaaccttgcatatattatgcattgt 236  Q
    ||||||||||||||||||||||||||||||||    
T  14741849 gaactccaaaccttgcatatattatgcattgt 14741818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 239
Target Start/End: Complemental strand, 4668743 - 4668705
Alignment:
Q  201 gtttgaactccaaaccttgcatatattatgcattgttca 239  Q
    ||||||||||||||| || ||||||||||||||||||||    
T  4668743 gtttgaactccaaactttacatatattatgcattgttca 4668705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 236
Target Start/End: Complemental strand, 8238626 - 8238588
Alignment:
Q  198 ggagtttgaactccaaaccttgcatatattatgcattgt 236  Q
    ||||||||||| ||| |||||||||||||||||||||||    
T  8238626 ggagtttgaaccccagaccttgcatatattatgcattgt 8238588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 238
Target Start/End: Complemental strand, 36690072 - 36690034
Alignment:
Q  200 agtttgaactccaaaccttgcatatattatgcattgttc 238  Q
    |||||||||||| |||||| |||||||||||||||||||    
T  36690072 agtttgaactccgaaccttacatatattatgcattgttc 36690034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 236
Target Start/End: Complemental strand, 45727559 - 45727513
Alignment:
Q  190 tggtggttggagtttgaactccaaaccttgcatatattatgcattgt 236  Q
    ||||||| ||||||||||| | |||||||||||| ||||||||||||    
T  45727559 tggtggtcggagtttgaaccctaaaccttgcatacattatgcattgt 45727513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 236
Target Start/End: Original strand, 48022305 - 48022351
Alignment:
Q  190 tggtggttggagtttgaactccaaaccttgcatatattatgcattgt 236  Q
    ||||||| ||||||||||| || ||| ||||||||||||||||||||    
T  48022305 tggtggtcggagtttgaaccccgaactttgcatatattatgcattgt 48022351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 236
Target Start/End: Original strand, 48234444 - 48234490
Alignment:
Q  190 tggtggttggagtttgaactccaaaccttgcatatattatgcattgt 236  Q
    ||||||| || |||| ||||||||||| |||||||||||||||||||    
T  48234444 tggtggtcggggtttaaactccaaaccatgcatatattatgcattgt 48234490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 236
Target Start/End: Complemental strand, 50037381 - 50037335
Alignment:
Q  190 tggtggttggagtttgaactccaaaccttgcatatattatgcattgt 236  Q
    |||||| |||||||||||| || ||||||||||| ||||||||||||    
T  50037381 tggtggctggagtttgaaccccgaaccttgcatacattatgcattgt 50037335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 238
Target Start/End: Original strand, 8913707 - 8913747
Alignment:
Q  198 ggagtttgaactccaaaccttgcatatattatgcattgttc 238  Q
    |||| ||||||||| ||||||||||| ||||||||||||||    
T  8913707 ggagcttgaactccgaaccttgcatacattatgcattgttc 8913747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 237
Target Start/End: Complemental strand, 19880283 - 19880247
Alignment:
Q  201 gtttgaactccaaaccttgcatatattatgcattgtt 237  Q
    ||||||||||| |||||||||| ||||||||||||||    
T  19880283 gtttgaactccgaaccttgcatttattatgcattgtt 19880247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 238
Target Start/End: Original strand, 28430556 - 28430604
Alignment:
Q  190 tggtggttggagtttgaactccaaaccttgcatatattatgcattgttc 238  Q
    |||||||  ||||||||||  || |||||||||||||||||||||||||    
T  28430556 tggtggtcagagtttgaacctcagaccttgcatatattatgcattgttc 28430604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 237
Target Start/End: Complemental strand, 33223938 - 33223891
Alignment:
Q  189 atggtggttggagtttgaactccaaaccttgcatatattatgcattgtt 237  Q
    ||||||| ||| |||||||||| || |||||||||||||||||||||||    
T  33223938 atggtggatggtgtttgaactcgaa-ccttgcatatattatgcattgtt 33223891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 238
Target Start/End: Complemental strand, 45334247 - 45334211
Alignment:
Q  202 tttgaactccaaaccttgcatatattatgcattgttc 238  Q
    ||||||| || ||||||||||||||||||||||||||    
T  45334247 tttgaaccccgaaccttgcatatattatgcattgttc 45334211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1149 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1149
Description:

Target: scaffold1149; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 201 - 236
Target Start/End: Complemental strand, 2391 - 2356
Alignment:
Q  201 gtttgaactccaaaccttgcatatattatgcattgt 236  Q
    |||||||| |||||||||||||||||||||||||||    
T  2391 gtttgaaccccaaaccttgcatatattatgcattgt 2356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 239
Target Start/End: Complemental strand, 171219 - 171180
Alignment:
Q  200 agtttgaactccaaaccttgcatatattatgcattgttca 239  Q
    ||||||||||||||| ||||||||| ||||||||||||||    
T  171219 agtttgaactccaaatcttgcatattttatgcattgttca 171180  T

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Target: scaffold0350 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0350
Description:

Target: scaffold0350; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 236
Target Start/End: Complemental strand, 1310 - 1272
Alignment:
Q  198 ggagtttgaactccaaaccttgcatatattatgcattgt 236  Q
    ||||||||||||||| ||||| |||||||||||||||||    
T  1310 ggagtttgaactccagaccttacatatattatgcattgt 1272  T

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Target: scaffold0334 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 236
Target Start/End: Complemental strand, 5252 - 5206
Alignment:
Q  190 tggtggttggagtttgaactccaaaccttgcatatattatgcattgt 236  Q
    |||||||||| ||||||||  || |||||||||||||||||||||||    
T  5252 tggtggttggggtttgaacctcagaccttgcatatattatgcattgt 5206  T

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Target: scaffold0016 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 236
Target Start/End: Complemental strand, 99099 - 99061
Alignment:
Q  198 ggagtttgaactccaaaccttgcatatattatgcattgt 236  Q
    ||||||||||| ||| |||||||||||||||||||||||    
T  99099 ggagtttgaaccccagaccttgcatatattatgcattgt 99061  T

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Target: scaffold0122 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 239
Target Start/End: Original strand, 14177 - 14226
Alignment:
Q  190 tggtggttggagtttgaactccaaaccttgcatatattatgcattgttca 239  Q
    ||||||| || ||||||||  || ||||||||||||||||||||||||||    
T  14177 tggtggtcggggtttgaaccacataccttgcatatattatgcattgttca 14226  T

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