View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2110_high_11 (Length: 239)
Name: NF2110_high_11
Description: NF2110
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2110_high_11 |
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Alignment Details
Target: chr8 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 8 - 228
Target Start/End: Original strand, 2425172 - 2425392
Alignment:
| Q |
8 |
tacagaacttaagattttccaattccaacaacattgttatgaatggtgtaacatccttgaatagccaaatgttccacatagtgatagacagatgcaataa |
107 |
Q |
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| T |
2425172 |
tacagaacttaagattttccaattccaacaacattgttatgaatggtgtaacatccttgaatagccaaatgttccacatagtgatagacagatgcaataa |
2425271 |
T |
|
| Q |
108 |
tgtgaaagtacaaggggttaaggtaacagcagcaggaaatagtcccaacactgatggtattcatgttcaactctcatcaagtgtcaccatcctcaactcc |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2425272 |
tgtgaaagtacaaggggttaaggtaacagcagcaggaaatagtcccaacactgatggtattcatgttcaactctcatcaagtgtcaccatcctcaactcc |
2425371 |
T |
|
| Q |
208 |
aacatagaaacaggtgatgat |
228 |
Q |
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||||||||||| || |||||| |
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| T |
2425372 |
aacatagaaaccggcgatgat |
2425392 |
T |
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