View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21113_high_18 (Length: 250)
Name: NF21113_high_18
Description: NF21113
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21113_high_18 |
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Alignment Details
Target: chr7 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 37916401 - 37916312
Alignment:
| Q |
1 |
ttttacttctcatttgtcgaagaagcagaagaaacaactcaccaaagtcactacacacaacatccgttccaagggcgactgaggagcata |
90 |
Q |
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| T |
37916401 |
ttttactcctcatttgttgaagaagcagaagaaacaactcaccaaagtcactacacacaacacccgttccaagggcgactgaggagcata |
37916312 |
T |
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Target: chr7; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 186 - 245
Target Start/End: Complemental strand, 37916215 - 37916156
Alignment:
| Q |
186 |
gaggtgccaatcttgttagatgtctgagtctcctcttaatgtatttcctttcttctcact |
245 |
Q |
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| T |
37916215 |
gaggtgccaatcttgttagatgtctgagtctcctcttaatgtatttcctttcttctcact |
37916156 |
T |
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