View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF21113_high_5 (Length: 460)
Name: NF21113_high_5
Description: NF21113
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21113_high_5 |
 | |
|
| [»] scaffold0166 (1 HSPs) |
| | |
|
| [»] scaffold0145 (1 HSPs) |
| | |
|
| [»] scaffold0218 (1 HSPs) |
| | |
|
| [»] scaffold0091 (1 HSPs) |
| | |
|
| [»] scaffold0063 (1 HSPs) |
| | |
|
| [»] scaffold0003 (1 HSPs) |
| | |
|
| [»] scaffold0061 (2 HSPs) |
| | |
|
| [»] scaffold0054 (1 HSPs) |
| | |
|
| [»] scaffold0601 (1 HSPs) |
| | |
|
Alignment Details
Target: chr2 (Bit Score: 316; Significance: 1e-178; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 1 - 448
Target Start/End: Original strand, 44583642 - 44584080
Alignment:
| Q |
1 |
ttggtgttgttgtttgtacttaggtattattttattgttgagaaaatagaaataatgacgtggagtgggaggtggtttgagagaattaaaaggaacgagg |
100 |
Q |
| |
|
|||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||| |
|
|
| T |
44583642 |
ttggtgatgttgtttgtgcttaggtattattttattgttgagaaaatagaaataatgaggtggagtgtgaggtggtttgagaaaattaaaaggaacgagg |
44583741 |
T |
|
| Q |
101 |
aggagtgtcctaacaaaataaataaagagtcgtggatgtagaaagtaagattataacaagtgggggaggggagaagtaaaagagtaatgtgtaagaaagg |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||||| |||||| ||||| |
|
|
| T |
44583742 |
aggagtgtcctaacaaaataaataaagagtcgtgggtgtagaaagtaagattataacaaaaaggggtggggagaagtaaaagagtagtgtgtaggaaagc |
44583841 |
T |
|
| Q |
201 |
aagacaattatagcgaatagtgagcccaaatataaataggaatattagggattagaaatcagatttgctaatcagagaaaagggagaggaaaagcagatg |
300 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| |
|
|
| T |
44583842 |
aagacaattatagcgaataatgagcccaaatataaataggaatattagggattagaaatcagttttgct---------aaagggagaggaaaagcagatg |
44583932 |
T |
|
| Q |
301 |
gagagaagcggaaccctagtgcagcaacatcaagtcaaaccaaaggtttctacggattcgaggtaagggggagaatctcttcatctctagggtttaatat |
400 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | ||||||||||||||||| |
|
|
| T |
44583933 |
gagagaagcggaatcctagtgcagcaacatcaagtcaaaccaaaggtttctacggatttgaggtaagggggagaatctctccgtctctagggtttaatat |
44584032 |
T |
|
| Q |
401 |
tttgttgtggggatgtaaaggggttatactaagagtgttgttatgatg |
448 |
Q |
| |
|
| ||||||||||||||||| | |||||| || ||||||||||||||| |
|
|
| T |
44584033 |
tctgttgtggggatgtaaatgagttatagtagcagtgttgttatgatg |
44584080 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 24 - 426
Target Start/End: Complemental strand, 24788953 - 24788547
Alignment:
| Q |
24 |
gtattattttattgttgagaaaatagaaataatgacgtggagtgggaggtggtt---tgagagaattaaaaggaacgaggaggagtgtcctaacaaaata |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||| |||||||||||||||||| ||||| ||||| |||||| |
|
|
| T |
24788953 |
gtattattttattgttgagaaaatagaaataatgacatggagtggaaggtggtggtatgagaaaattaaaaggaacgaggaagagtgccctaataaaata |
24788854 |
T |
|
| Q |
121 |
aataaagagtcgtggatgtagaaagtaagattataacaagtgggggaggggagaagtaaaagagtaatgtgtaagaaaggaagacaattatagcgaatag |
220 |
Q |
| |
|
||||||||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||| || ||| |||||||||||||||||||||||||| |
|
|
| T |
24788853 |
aataaagagtcgtgggtgtagaaagcaagattataataagtgggggaggggagaagtaaaagagtagtgcgtatgaaaggaagacaattatagcgaatag |
24788754 |
T |
|
| Q |
221 |
tgagcccaaatataaataggaatattagggattagaaatcagatttgctaatcagag-aaaagggagaggaaaagcagatggagagaagcggaaccctag |
319 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| || |||||| ||| ||| |||||||||| ||||| || | |||||||||||||||||||| |
|
|
| T |
24788753 |
tgagcccaaatataaataggaatattagggattagaaattagttttgctgatcggagaaaaagggagaagaaaaacaaagggagagaagcggaaccctag |
24788654 |
T |
|
| Q |
320 |
tgcagcaacatcaagtcaaaccaaaggtttctacggattcgaggtaagggggagaatctcttcatctctagggtttaatattttgttgtggggatgtaaa |
419 |
Q |
| |
|
||||||||| || || |||||| |||||||||||||||||||||||||||||| ||| | ||||||||||||||||| |||| | ||||||||||||| |
|
|
| T |
24788653 |
tgcagcaacttctagccaaaccgaaggtttctacggattcgaggtaagggggataatatattcatctctagggtttatgtttttatcgtggggatgtaaa |
24788554 |
T |
|
| Q |
420 |
ggggtta |
426 |
Q |
| |
|
| ||||| |
|
|
| T |
24788553 |
gaggtta |
24788547 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 24 - 396
Target Start/End: Original strand, 23651539 - 23651896
Alignment:
| Q |
24 |
gtattattttattgttgagaaaatagaaataatgacgtggagtgggaggtggtttgagagaattaaaaggaacgaggaggagtgtcctaacaaaataaat |
123 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||| ||| ||||||||||||||||||| | || |||||||||| ||| || |||| |||||||||||| |
|
|
| T |
23651539 |
gtattattttgttgttgagaaaatagaaataatgatgtgtagtgggaggtggtttgagaaagtttaaaggaacgaagagtagagtccaaacaaaataaat |
23651638 |
T |
|
| Q |
124 |
aaagagtcgtggatgtagaaagtaagattataacaagtgggggaggggagaagtaaaagagtaatgtgtaagaaaggaagacaattatagcgaatagtga |
223 |
Q |
| |
|
| ||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||| || ||| |||| || ||||||||| || |||||| |
|
|
| T |
23651639 |
a--gagtcgtgggtgtagaaagtaagattttaataagtgggggaggggagaagtaaaagagtagtgcgtagtaaagaaatgcaattatagagattagtga |
23651736 |
T |
|
| Q |
224 |
gcccaaatataaataggaatattagggattagaaatcag-atttgctaatcagagaaaagggagaggaaaagcagatggagagaagcggaaccctagtgc |
322 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||| ||| ||| ||||||| ||||| | | ||||||||||||||||| ||| |
|
|
| T |
23651737 |
acccatatataaataggaatattagggattagaaatcagtattggctgatcagag--------------aagcaaaggtagagaagcggaaccctaatgc |
23651822 |
T |
|
| Q |
323 |
agcaacatcaagtcaaaccaaaggtttctacggattcgaggtaagggggagaatctcttcatctctagggttta |
396 |
Q |
| |
|
||||||||| || ||||| ||||| ||||| |||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
23651823 |
agcaacatcgagccaaactgaaggtatctacagattcgaggtaagggggagaatctattcatctctagggttta |
23651896 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 118 - 426
Target Start/End: Original strand, 21553786 - 21554092
Alignment:
| Q |
118 |
ataaataaagagtcgtggatgtagaaagtaagattataacaagtgggggaggggagaagtaaaagagtaatgtgtaagaaaggaagacaattatagcgaa |
217 |
Q |
| |
|
||||||||||||||| | |||||| |||||||| || | |||||||||||||||| ||||| |||| ||| ||||||| || | ||| |||| |
|
|
| T |
21553786 |
ataaataaagagtcggaggtgtagagagtaagatctaaatacgtgggggaggggagaattaaaatagtagcacgtaggaaaggagga--accataacgaa |
21553883 |
T |
|
| Q |
218 |
tagtgagcccaaatataaataggaatattagggattagaaatcagatttgctaatcagagaaaagggagaggaaaagcagatggagagaagcggaaccct |
317 |
Q |
| |
|
||||||| ||| |||||||| ||||||||||||||||||||||| |||| | ||||||| |||| |||| || ||||||| |||||||| |||||| || |
|
|
| T |
21553884 |
tagtgagtccatgtataaataagaatattagggattagaaatcagttttgttgatcagagtaaagagagaagagaagcagaaggagagaaacggaactct |
21553983 |
T |
|
| Q |
318 |
agtgcagcaacatcaagtcaaaccaaaggtttctacggattcgaggtaagggggagaatctcttcatctctagggtttaatattttgttgtggggatgta |
417 |
Q |
| |
|
|||||| | ||| | || |||| | |||||||||||||||||||||||||||||||||| | ||||| | ||| ||||| |||| || ||||| |||| |
|
|
| T |
21553984 |
agtgcaacgacaccgagccaaaacgaaggtttctacggattcgaggtaagggggagaatatattcatttttagagtttatgtttttattatggggttgta |
21554083 |
T |
|
| Q |
418 |
aaggggtta |
426 |
Q |
| |
|
||| ||||| |
|
|
| T |
21554084 |
aagaggtta |
21554092 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 347 - 396
Target Start/End: Complemental strand, 13362116 - 13362067
Alignment:
| Q |
347 |
tttctacggattcgaggtaagggggagaatctcttcatctctagggttta |
396 |
Q |
| |
|
|||| ||| |||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
13362116 |
tttcgacgaattcaaggtaagggggagaatctcttcatctctagggttta |
13362067 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 315; Significance: 1e-177; HSPs: 8)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 315; E-Value: 1e-177
Query Start/End: Original strand, 24 - 445
Target Start/End: Complemental strand, 11658064 - 11657642
Alignment:
| Q |
24 |
gtattattttattgttgagaaaatagaaataatgacgtggagtgggaggtggtttgagagaattaaaaggaacgaggaggagtgtcctaacaaaataaat |
123 |
Q |
| |
|
||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||| || ||||||||||||||||||||||||||| |
|
|
| T |
11658064 |
gtattatttaattgttgagaaaagagaaataatgacgtggagtgggaagtggtttgagaaaattaaaagcaatgaggaggagtgtcctaacaaaataaat |
11657965 |
T |
|
| Q |
124 |
aaagagtcgtggatgtagaaagtaagatt-ataacaagtgggggaggggagaagtaaaagagtaatgtgtaagaaaggaagacaattatagcgaatagtg |
222 |
Q |
| |
|
|||||||||||| |||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| |
|
|
| T |
11657964 |
aaagagtcgtgggtgtagaaagtaagatttataataagtgggggaggggagaagtaaaagagtagtgtgtaggaaaggaagacaattatagcgaatagtg |
11657865 |
T |
|
| Q |
223 |
agcccaaatataaataggaatattagggattagaaatcagatttgctaatcagagaaaagggagaggaaaagcagatggagagaagcggaaccctagtgc |
322 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| ||| ||||||||| ||||||||||||| |
|
|
| T |
11657864 |
agcccaaatataaataggaatattagggattagaaatcagttttgctaatcagagaaaagggagaagaaaagaagagggagagaagaggaaccctagtgc |
11657765 |
T |
|
| Q |
323 |
agcaacatcaagtcaaaccaaaggtttctacggattcgaggtaagggggagaatctcttcatctctagggtttaatattttgttgtggggatgtaaaggg |
422 |
Q |
| |
|
||| |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| || ||||||||| |
|
|
| T |
11657764 |
agctacatcaagccaaaccaaaggtttctacggattcgaggtaagggtgagaatctcttcatttctagggtttaatattttgttgtgaggctgtaaaggg |
11657665 |
T |
|
| Q |
423 |
gttatactaagagtgttgttatg |
445 |
Q |
| |
|
|||| | || |||||||||||| |
|
|
| T |
11657664 |
gttacagtagaagtgttgttatg |
11657642 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 305; E-Value: 1e-171
Query Start/End: Original strand, 24 - 448
Target Start/End: Original strand, 13474797 - 13475221
Alignment:
| Q |
24 |
gtattattttattgttgagaaaatagaaataatgacgtggagtgggaggtggtttgagagaattaaaaggaacgaggaggagtgtcctaacaaaataaat |
123 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
13474797 |
gtattattttattgttgagaaaatagaaataatgacgtggagtgggaggtggtttgagaaaattaaaaggaacgaggaggattgtcctaacaaaataaat |
13474896 |
T |
|
| Q |
124 |
aaagagtcgtggatgtagaaagtaagattataacaagtgggggaggggagaagtaaaagagtaatgtgtaagaaaggaagacaattatagcgaatagtga |
223 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || || |||| ||| |||||||||| || ||||| |
|
|
| T |
13474897 |
aaagagtcgtggatgtagaaagtaagattataataagtgggggaggggagaagtaaaagagtagtgcataggaaatgaatacaattatagaaaacagtga |
13474996 |
T |
|
| Q |
224 |
gcccaaatataaataggaatattagggattagaaatcagatttgctaatcagagaaaagggagaggaaaagcagatggagagaagcggaaccctagtgca |
323 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||| ||||||||| |||||||||| ||| ||||| |||| |||||||||| ||||||||||||| |
|
|
| T |
13474997 |
gcccaaatataaataggagtattagggattagaaatcagttttgctaattagagaaaaggaagaagaaaaccagagggagagaagctgaaccctagtgca |
13475096 |
T |
|
| Q |
324 |
gcaacatcaagtcaaaccaaaggtttctacggattcgaggtaagggggagaatctcttcatctctagggtttaatattttgttgtggggatgtaaagggg |
423 |
Q |
| |
|
|||||||| || |||| | |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| | |||||||| |||||||||| |
|
|
| T |
13475097 |
gcaacatcgaggcaaatcgaaggtttctacggattcgaggtaaagggaagaatctcttcatctctagggtttaatattctattgtggggctgtaaagggg |
13475196 |
T |
|
| Q |
424 |
ttatactaagagtgttgttatgatg |
448 |
Q |
| |
|
||||| ||||||||||||||||||| |
|
|
| T |
13475197 |
ttatagtaagagtgttgttatgatg |
13475221 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 195 - 448
Target Start/End: Original strand, 22612426 - 22612679
Alignment:
| Q |
195 |
gaaaggaagacaattatagcgaatagtgagcccaaatataaataggaatattagggattagaaatcagatttgctaatcagagaaaagggagaggaaaag |
294 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||||| |
|
|
| T |
22612426 |
gaaaggaagacaattatagcgaatggtgagcccaaatataaataggaatattagggattagaaatcagtttttctaatcagagaaaagggagaagaaaag |
22612525 |
T |
|
| Q |
295 |
cagatggagagaagcggaaccctagtgcagcaacatcaagtcaaaccaaaggtttctacggattcgaggtaagggggagaatctcttcatctctagggtt |
394 |
Q |
| |
|
|||| ||||||||||||||||||||||| ||||||| || |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22612526 |
cagacagagagaagcggaaccctagtgcaacaacatcgagccaaaccgaaggtttctacggattcgaggtaagggggagaatctcttcatctctagggtt |
22612625 |
T |
|
| Q |
395 |
taatattttgttgtggggatgtaaaggggttatactaagagtgttgttatgatg |
448 |
Q |
| |
|
||||||| |||||||||||||||||||||||| || |||||||||||||||| |
|
|
| T |
22612626 |
taatattggcttgtggggatgtaaaggggttatagtaggagtgttgttatgatg |
22612679 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 24 - 191
Target Start/End: Original strand, 22611329 - 22611496
Alignment:
| Q |
24 |
gtattattttattgttgagaaaatagaaataatgacgtggagtgggaggtggtttgagagaattaaaaggaacgaggaggagtgtcctaacaaaataaat |
123 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| | |||||||||||||||||||||||||||||| |
|
|
| T |
22611329 |
gtattattttattgttgagaaaatagaaataatgacgtggagtgggaagtggtttgagaaaattaaatgcaacgaggaggagtgtcctaacaaaataaat |
22611428 |
T |
|
| Q |
124 |
aaagagtcgtggatgtagaaagtaagattataacaagtgggggaggggagaagtaaaagagtaatgtg |
191 |
Q |
| |
|
|||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||| |
|
|
| T |
22611429 |
aaagagtcgtgggtgtagaaagtaagattataataagtgggggaggggagaagtaaaagagtagtgtg |
22611496 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 358 - 448
Target Start/End: Original strand, 13773830 - 13773920
Alignment:
| Q |
358 |
tcgaggtaagggggagaatctcttcatctctagggtttaatattttgttgtggggatgtaaaggggttatactaagagtgttgttatgatg |
448 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||| || |||||||||||||||| |
|
|
| T |
13773830 |
tcgaggtaagggatagaatctcttcatctctagggtttattattttgttgtagggttgtaaaggggttatagtatgagtgttgttatgatg |
13773920 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 358 - 448
Target Start/End: Complemental strand, 48379020 - 48378931
Alignment:
| Q |
358 |
tcgaggtaagggggagaatctcttcatctctagggtttaatattttgttgtggggatgtaaaggggttatactaagagtgttgttatgatg |
448 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| | || |||||||||||||||| |
|
|
| T |
48379020 |
tcgaggtaagggg-agaatctcttcatctctagggtttaatattttgttgtagggttgtaaaggggttagagtatgagtgttgttatgatg |
48378931 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 347 - 396
Target Start/End: Original strand, 37943946 - 37943995
Alignment:
| Q |
347 |
tttctacggattcgaggtaagggggagaatctcttcatctctagggttta |
396 |
Q |
| |
|
|||| |||||||| ||||||| |||||||||| ||||||||||||||||| |
|
|
| T |
37943946 |
tttcgacggattcaaggtaagagggagaatctattcatctctagggttta |
37943995 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 358 - 388
Target Start/End: Original strand, 15865104 - 15865134
Alignment:
| Q |
358 |
tcgaggtaagggggagaatctcttcatctct |
388 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
15865104 |
tcgaggtaagggggagaatctcttcatctct |
15865134 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 243; Significance: 1e-134; HSPs: 10)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 14 - 444
Target Start/End: Original strand, 21100345 - 21100773
Alignment:
| Q |
14 |
ttgtacttaggtattattttattgttgagaaaatagaaataatgacgtggagtgggaggtggtttgagagaattaaaaggaacgaggaggagtgtcctaa |
113 |
Q |
| |
|
|||||||| |||||||||| |||||||||||||||||||||||| ||| || |||||||||||||||| ||||||||||||| | |||||| ||| | | |
|
|
| T |
21100345 |
ttgtacttgagtattattttgttgttgagaaaatagaaataatgatgtgtagcgggaggtggtttgagaaaattaaaaggaacaaagaggagagtcttga |
21100444 |
T |
|
| Q |
114 |
caaaataaataaagagtcgtggatgtagaaagtaagattataacaagtgggggaggggagaagtaaaagagtaatgtgtaagaaaggaagacaattatag |
213 |
Q |
| |
|
|||||||||||||||||||||| ||| |||||||||||| ||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |
|
|
| T |
21100445 |
caaaataaataaagagtcgtgggtgtggaaagtaagattttaataagtgggggaggggagaagtaaaagagtactgcgtaagaaaggaagacaattatag |
21100544 |
T |
|
| Q |
214 |
cgaatagtgagcccaaatataaataggaatattagggattagaaatcagatttgctaatcagagaaaagggagaggaaaagcagatggagagaagcggaa |
313 |
Q |
| |
|
| ||| | ||||||||||||||||| ||||||||||||||| |||||| |||||| ||||||| ||||||||| || |||||| |||||||||||||| |
|
|
| T |
21100545 |
c-aattgcgagcccaaatataaataagaatattagggattaaaaatcaattttgctgatcagagtaaagggagaagagaagcagggggagagaagcggaa |
21100643 |
T |
|
| Q |
314 |
ccctagtgcagcaacatcaagtcaaaccaaaggtttctacggattcgaggtaagggggagaatctcttcatctctagggtttaatattttgttgtgggga |
413 |
Q |
| |
|
|||||||||||||||||| || |||||| |||||||||| ||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
21100644 |
ccctagtgcagcaacatcgagccaaaccgaaggtttctatggatttgaggtaa-ggggagaatctcttcatatctagggtttaatattttgttgtgggtc |
21100742 |
T |
|
| Q |
414 |
tgtaaaggggttatactaagagtgttgttat |
444 |
Q |
| |
|
||||||| ||||| | | |||||||||||| |
|
|
| T |
21100743 |
tgtaaagaggttagaggatgagtgttgttat |
21100773 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 25 - 378
Target Start/End: Complemental strand, 19187236 - 19186880
Alignment:
| Q |
25 |
tattattttattgttgagaaaatagaaataatgacgtggagtgggaggtggtttgagagaattaaaaggaacgaggaggagtgtcctaacaaaataaata |
124 |
Q |
| |
|
|||||||||| | ||||||||||||||||||||| | ||||||||||||| ||| || ||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
19187236 |
tattattttacttttgagaaaatagaaataatgatgaggagtgggaggtgctttacgaaaattaaaaggaacgaggaggagtatcctaacaaaataaata |
19187137 |
T |
|
| Q |
125 |
a----agagtcgtggatgtagaaagtaagattataacaagtgggggaggggagaagtaaaagagtaatgtgtaagaaaggaagacaattatagcgaatag |
220 |
Q |
| |
|
| |||| ||||| ||||||||| || ||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| |
|
|
| T |
19187136 |
attaaagagacgtgggtgtagaaagcaaaattataataagtgggggaggggagaagtaaaagagtagtgtgtaggaaaggaagacaattatagcgaataa |
19187037 |
T |
|
| Q |
221 |
tgagcccaaatataaataggaatattagggattagaaatcagatttgctaatcagagaaaagggagaggaaaagcagatggagagaagcggaaccctagt |
320 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| |||||||||| |||||||||||||||||||| |
|
|
| T |
19187036 |
tgagccaaaatataaataggaatattagggattagaaatcagttttgctaat-agagaaaagggagaagaaaagcagagggagagaagcggaaccctagg |
19186938 |
T |
|
| Q |
321 |
gcagcaacatcaagtcaaaccaaaggtttctacggattcgaggtaagggggagaatct |
378 |
Q |
| |
|
||||||||||| || |||||| |||||||||||||||||||||||||| ||||||||| |
|
|
| T |
19186937 |
gcagcaacatcgagccaaaccgaaggtttctacggattcgaggtaaggaggagaatct |
19186880 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 24 - 426
Target Start/End: Complemental strand, 17793799 - 17793395
Alignment:
| Q |
24 |
gtattattttattgttgagaaaatagaaataatgacgtggagtgggaggtggtttgagagaattaaaaggaacgaggaggagtgt---cctaacaaaata |
120 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
17793799 |
gtattatgttattgttgagaaaatagaaataatgacatggagtgggaggtggtttgggaaaattaaaaggaacgaggaggagtgtgatcctaacaaaata |
17793700 |
T |
|
| Q |
121 |
aataaagagtcgtggatgtagaaagtaagattataacaagtgggggaggggagaagtaaaagagtaatgtgtaagaaaggaagacaattatagcgaatag |
220 |
Q |
| |
|
|||||||||| ||| ||||||||||||||||| || |||||||| |||||| ||||||||||||| || || |||| |||||||||||||| |||||| |
|
|
| T |
17793699 |
aataaagagttctgggtgtagaaagtaagattacaataagtggggaaggggataagtaaaagagtagtgcataggaaaagaagacaattatagtgaatag |
17793600 |
T |
|
| Q |
221 |
tgagcccaaatataaataggaatattagggattagaaatcagatttgctaatcagagaaaagggagaggaaaagcagatggagagaagcggaaccctagt |
320 |
Q |
| |
|
||||| |||||||||||||||||||||||| ||| | || || |||||| || |||||||||||||| ||| |||||| | |||||||||||||| |||| |
|
|
| T |
17793599 |
tgagcgcaaatataaataggaatattaggggttacatataagttttgctgat-agagaaaagggagaagaatagcagaggaagagaagcggaaccgtagt |
17793501 |
T |
|
| Q |
321 |
gcagcaacatcaagtcaaaccaaaggtttctacggattcgaggtaagggggagaatctcttcatctctagggtttaatattttgttgtggggatgtaaag |
420 |
Q |
| |
|
||||||||||| || |||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||||| |||| |||||||| ||| ||| |
|
|
| T |
17793500 |
gcagcaacatcgagccaaaccgaaggtttctacagattcgaggtaagggggagaatctattcatctctagggtttatgtttttattgtggggctgtgaag |
17793401 |
T |
|
| Q |
421 |
gggtta |
426 |
Q |
| |
|
||||| |
|
|
| T |
17793400 |
aggtta |
17793395 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 24 - 426
Target Start/End: Complemental strand, 19102239 - 19101835
Alignment:
| Q |
24 |
gtattattttattgttgagaaaatagaaataatgacgtggagtgggaggtggtttgagagaattaaaaggaacgaggaggagtgt---cctaacaaaata |
120 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
19102239 |
gtattatgttattgttgagaaaatagaaataatgacatggagtgggaggtggtttgggaaaattaaaaggaacgaggaggagtgtgatcctaacaaaata |
19102140 |
T |
|
| Q |
121 |
aataaagagtcgtggatgtagaaagtaagattataacaagtgggggaggggagaagtaaaagagtaatgtgtaagaaaggaagacaattatagcgaatag |
220 |
Q |
| |
|
|||||||||| ||| ||||||||||||||||| || |||||||| |||||| ||||||||||||| || || |||| |||||||||||||| |||||| |
|
|
| T |
19102139 |
aataaagagttctgggtgtagaaagtaagattacaataagtggggaaggggataagtaaaagagtagtgcataggaaaagaagacaattatagtgaatag |
19102040 |
T |
|
| Q |
221 |
tgagcccaaatataaataggaatattagggattagaaatcagatttgctaatcagagaaaagggagaggaaaagcagatggagagaagcggaaccctagt |
320 |
Q |
| |
|
||||| |||||||||||||||||||||||| ||| | || || |||||| || |||||||||||||| ||| |||||| | |||||||||||||| |||| |
|
|
| T |
19102039 |
tgagcgcaaatataaataggaatattaggggttacatataagttttgctgat-agagaaaagggagaagaatagcagaggaagagaagcggaaccgtagt |
19101941 |
T |
|
| Q |
321 |
gcagcaacatcaagtcaaaccaaaggtttctacggattcgaggtaagggggagaatctcttcatctctagggtttaatattttgttgtggggatgtaaag |
420 |
Q |
| |
|
||||||||||| || |||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||||| |||| |||||||| ||| ||| |
|
|
| T |
19101940 |
gcagcaacatcgagccaaaccgaaggtttctacagattcgaggtaagggggagaatctattcatctctagggtttatgtttttattgtggggctgtgaag |
19101841 |
T |
|
| Q |
421 |
gggtta |
426 |
Q |
| |
|
||||| |
|
|
| T |
19101840 |
aggtta |
19101835 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 24 - 412
Target Start/End: Original strand, 5941396 - 5941782
Alignment:
| Q |
24 |
gtattattttattgttgagaaaatagaaataatgacgtggagtgggaggtggtttgagagaattaaaaggaacgaggaggagtgtcctaacaaaataaat |
123 |
Q |
| |
|
|||||||||| ||| || |||||||||||||||| ||||||||||||||||||||||| ||||||||| || || |||||| |||| |||||||||||| |
|
|
| T |
5941396 |
gtattattttgttgacgataaaatagaaataatgatgtggagtgggaggtggtttgagaaaattaaaagaaatgaagaggagagtcc-aacaaaataaat |
5941494 |
T |
|
| Q |
124 |
aaagagtcgtggatgtagaaagtaagattataacaagtgggggaggggagaagtaaaagagtaatgtgtaagaaaggaagacaattatagcgaatagtga |
223 |
Q |
| |
|
|||||||| ||| |||||||||||||||| ||| ||||| || ||||| |||||||||||||| || ||| |||||||| ||||||||| ||||||||| |
|
|
| T |
5941495 |
aaagagtcatgggtgtagaaagtaagattttaataagtgaggaaggggggaagtaaaagagtattgcataaaaaaggaaggcaattatagagaatagtga |
5941594 |
T |
|
| Q |
224 |
gcccaaatataaataggaatattagggattagaaatcagatttgctaatcagagaaaagggagaggaaaagcagatggagagaagcggaaccctagtgca |
323 |
Q |
| |
|
||| | ||||||||| ||||||||||||||||||||||| |||||| ||||||||||||||||| || ||||| | ||||||||||| |||||||||| | |
|
|
| T |
5941595 |
gcctagatataaatatgaatattagggattagaaatcagttttgctgatcagagaaaagggagaagagaagcatagggagagaagcgaaaccctagtgta |
5941694 |
T |
|
| Q |
324 |
gcaacatcaagtcaaaccaaaggtttctacggattcgaggtaagggggagaatctcttcatctctagggtttaatattttgttgtgggg |
412 |
Q |
| |
|
|||||||| ||||||||||||||||||| ||||| |||||||||| |||||||| ||||||| ||||| ||||||||||||||||||| |
|
|
| T |
5941695 |
gcaacatcgggtcaaaccaaaggtttctatggatttgaggtaagggagagaatctattcatctataggg-ttaatattttgttgtgggg |
5941782 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 107 - 419
Target Start/End: Original strand, 15958017 - 15958328
Alignment:
| Q |
107 |
gtcctaacaaaataaataaagagtcgtggatgtagaaagtaagattataacaagtgggggaggggagaagtaaaagagtaatgtgtaagaaaggaagaca |
206 |
Q |
| |
|
|||| ||||| |||||||| | |||| | |||||||||||||||| || | |||||| | ||||||||||||| ||| | || ||||||| | | |
|
|
| T |
15958017 |
gtccaaacaacataaataaggggtcggaggtgtagaaagtaagattgaaatatgtgggg-atgggagaagtaaaattgtagcgcatatgaaaggagggaa |
15958115 |
T |
|
| Q |
207 |
attatagcgaatagtgagcccaaatataaataggaatattagggattagaaatcagatttgctaatcagagaaaagggagaggaaaagcagatggagaga |
306 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| |||||||||||||||||||| || ||||||||||||||||||| || | || ||| ||| ||||| | |
|
|
| T |
15958116 |
attataacgaatagtgagcccatgtataaataagaatattagggattagaaattagttttgctaatcagagaaaagagataagagaagaagaaggagaaa |
15958215 |
T |
|
| Q |
307 |
agcggaaccctagtgcagcaacatcaagtcaaaccaaaggtttctacggattcgaggtaagggggagaatctcttcatctctagggtttaatattttgtt |
406 |
Q |
| |
|
||| ||| |||||||||| |||| |||| |||| |||||||||||||||| ||||||||||||||||||| |||||||| || ||||| |||| || |
|
|
| T |
15958216 |
tgcgaaactctagtgcagcgacatttagtccaaccgaaggtttctacggatttgaggtaagggggagaatctattcatctcaagagtttatgtttttatt |
15958315 |
T |
|
| Q |
407 |
gtggggatgtaaa |
419 |
Q |
| |
|
|||||| |||||| |
|
|
| T |
15958316 |
gtggggttgtaaa |
15958328 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 361 - 448
Target Start/End: Original strand, 17959161 - 17959248
Alignment:
| Q |
361 |
aggtaagggggagaatctcttcatctctagggtttaatattttgttgtggggatgtaaaggggttatactaagagtgttgttatgatg |
448 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||| | || |||||||||||||||| |
|
|
| T |
17959161 |
aggtaagggggagaatctcttcatctctagggtttaatattttgattaagggttgtaaaggggttagagtatgagtgttgttatgatg |
17959248 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 358 - 444
Target Start/End: Original strand, 14057675 - 14057761
Alignment:
| Q |
358 |
tcgaggtaagggggagaatctcttcatctctagggtttaatattttgttgtggggatgtaaaggggttatactaagagtgttgttat |
444 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||| ||||||| ||| ||| |||| ||||||| | || |||||||||||| |
|
|
| T |
14057675 |
tcgaggtaaaggggagaatctcttcatctctagggtttattattttgctgtagggttgtagaggggttggagtatgagtgttgttat |
14057761 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 354 - 418
Target Start/End: Original strand, 14479496 - 14479560
Alignment:
| Q |
354 |
ggattcgaggtaagggggagaatctcttcatctctagggtttaatattttgttgtggggatgtaa |
418 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||| ||||| |
|
|
| T |
14479496 |
ggattcgaggtaagggggagaatcttttcatctctagggtttattatttcattgtggggctgtaa |
14479560 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 358 - 426
Target Start/End: Original strand, 16942074 - 16942142
Alignment:
| Q |
358 |
tcgaggtaagggggagaatctcttcatctctagggtttaatattttgttgtggggatgtaaaggggtta |
426 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||| ||||||| | | ||| ||||||||||||| |
|
|
| T |
16942074 |
tcgaggtaaggcggagaatctcttcatctctagggtttattattttgctatagggttgtaaaggggtta |
16942142 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 212; Significance: 1e-116; HSPs: 7)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 24 - 426
Target Start/End: Complemental strand, 11558864 - 11558462
Alignment:
| Q |
24 |
gtattattttattgttgagaaaatagaaataatgacgtggagtgggaggtggtttgagagaattaaaaggaa-cgaggaggagtgtcctaacaaaataaa |
122 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| | |||||||| ||| ||| |||||| ||||||| |||||||| |
|
|
| T |
11558864 |
gtattattttgttgttgagaaaatagaaataatgatgtggagtgggaggtggtttgaaaaaattaaaaagaaacgaagaggagagtcctaaaaaaataaa |
11558765 |
T |
|
| Q |
123 |
taaagagtcgtggatgtagaaagtaagattataacaagtgggggaggggagaagtaaaagagtaatgtgtaagaaaggaagacaattatagcgaatagtg |
222 |
Q |
| |
|
| ||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||| || |||||||| ||| |||||||| ||| ||||| |
|
|
| T |
11558764 |
tgaagagtcgtgggtgtagaaagtaagattttaataagtgggggaggggagaagtaaaagagtagtgcgtaagaaataaaggcaattataacgattagtg |
11558665 |
T |
|
| Q |
223 |
agcccaaatataaataggaatattagggattagaaatcagatttgctaatcagagaaaagggagaggaaaagcagatggagagaagcggaaccctagtgc |
322 |
Q |
| |
|
|||||| |||||||| |||||||||||| ||||||||||| |||||| || |||||||| | ||| || ||||||||||||||||| ||||||||| ||| |
|
|
| T |
11558664 |
agcccatatataaatgggaatattagggtttagaaatcagttttgctgatgagagaaaa-gtagaagagaagcagatggagagaagtggaaccctaatgc |
11558566 |
T |
|
| Q |
323 |
agcaacatcaagtcaaaccaaaggtttctacggattcgaggtaagggggagaatctcttcatctctagggtttaatattttgttgtggggatgtaaaggg |
422 |
Q |
| |
|
| ||||||| || |||||| ||||||||||||||||| |||||||| ||||||||| ||| |||||||||||| |||| |||||||||||||||| | |
|
|
| T |
11558565 |
aacaacatcgagccaaaccgaaggtttctacggattctaggtaaggaggagaatctaatcaactctagggtttatatttttattgtggggatgtaaagag |
11558466 |
T |
|
| Q |
423 |
gtta |
426 |
Q |
| |
|
|||| |
|
|
| T |
11558465 |
gtta |
11558462 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 168; E-Value: 7e-90
Query Start/End: Original strand, 24 - 378
Target Start/End: Complemental strand, 12231259 - 12230906
Alignment:
| Q |
24 |
gtattattttattgttgagaaaatagaaataatgacgtggagtgggaggtggtttgagagaattaaaaggaacgaggaggagtgtcctaacaaaataaat |
123 |
Q |
| |
|
|||||||||| |||||| ||||||||||||||||| ||||||||||||||| ||||||| | ||||||||||||| |||||| ||||||| ||||||||| |
|
|
| T |
12231259 |
gtattattttgttgttgcgaaaatagaaataatgatgtggagtgggaggtgatttgagaaagttaaaaggaacgaagaggagagtcctaagaaaataaat |
12231160 |
T |
|
| Q |
124 |
aaagagtcgtggatgtagaaagtaagattataacaagtgggggaggggagaagtaaaagagtaatgtgtaagaaaggaagacaattatagcgaatagtga |
223 |
Q |
| |
|
||||||||||| |||||||||||||||| ||| |||||||||||| |||||||||||||||| || || ||||| || ||||||||| || || ||| |
|
|
| T |
12231159 |
aaagagtcgtgagtgtagaaagtaagattttaataagtgggggaggagagaagtaaaagagtagtgcttaggaaagaaaagcaattatagagattaatga |
12231060 |
T |
|
| Q |
224 |
gcccaaatataaataggaatattagggattagaaatcagattt-gctaatcagagaaaagggagaggaaaagcagatggagagaagcggaaccctagtgc |
322 |
Q |
| |
|
|||| ||||||||| |||||||||||||||||||||| ||| ||| || |||||||||||||| || ||||| | |||||||||| ||||||| ||| |
|
|
| T |
12231059 |
gccc-gatataaataagaatattagggattagaaatcaattttggcttat-agagaaaagggagaagagaagcaaagggagagaagcagaaccctcgtgt |
12230962 |
T |
|
| Q |
323 |
agcaacatcaagtcaaaccaaaggtttctacggattcgaggtaagggggagaatct |
378 |
Q |
| |
|
|||||||||||| ||||| ||||||||||| |||||||||||||||||| ||||| |
|
|
| T |
12230961 |
agcaacatcaagccaaactgaaggtttctacagattcgaggtaagggggataatct |
12230906 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 24 - 396
Target Start/End: Original strand, 16282631 - 16282998
Alignment:
| Q |
24 |
gtattattttattgttgagaaaatagaaataatgacgtggagtgggaggtggtttgagagaattaaaaggaacgaggaggagtgtcctaacaaaataaat |
123 |
Q |
| |
|
|||||||||| ||| | |||||||||||||||||| |||||||||||||||||| ||| |||||||||| |||||| ||| ||||||||||||| |
|
|
| T |
16282631 |
gtattattttgttggtaagaaaatagaaataatgatatggagtgggaggtggtttaaga------aaaggaacgaagaggagagtcttaacaaaataaat |
16282724 |
T |
|
| Q |
124 |
aaagagtcgtggatgtagaaagtaagattataacaagtgggggaggggagaagtaaaagagtaatgtgtaagaaaggaagacaattatagcgaatagtga |
223 |
Q |
| |
|
|||||||||||| ||||||||||||| || ||| ||||||||||||||||||||||||||||| || || |||| ||| |||| ||| | |||||| |
|
|
| T |
16282725 |
aaagagtcgtgggtgtagaaagtaagtttttaataagtgggggaggggagaagtaaaagagtagtgcataggaaataaaggtaattctagatattagtga |
16282824 |
T |
|
| Q |
224 |
gcccaaatataaataggaatattagggattagaaatcagatttg-ctaatcagagaaaagggagaggaaaagcagatggagagaagcggaaccctagtgc |
322 |
Q |
| |
|
||||| |||| ||||||||||||||||||||||||||| |||| ||||| || ||||||||||| | ||||| | || ||||| ||||||||| ||| |
|
|
| T |
16282825 |
gcccatttatatataggaatattagggattagaaatcagttttggctaataagggaaaagggagaaaagaagcaaagagaaagaagtggaaccctactgc |
16282924 |
T |
|
| Q |
323 |
agcaacatcaagtcaaaccaaaggtttctacggattcgaggtaagggggagaatctcttcatctctagggttta |
396 |
Q |
| |
|
||||||||| |||||||||||| |||||||||| |||||||||||||||||||||| ||||||| ||||||||| |
|
|
| T |
16282925 |
agcaacatcgagtcaaaccaaatgtttctacgggttcgaggtaagggggagaatctattcatctatagggttta |
16282998 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 24 - 318
Target Start/End: Original strand, 18218123 - 18218418
Alignment:
| Q |
24 |
gtattattttattgttgagaaaatagaaataatgacgtggagtgggaggtggtttgagagaattaaaa-ggaacgaggaggagtgtcctaacaaaataaa |
122 |
Q |
| |
|
|||||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||| ||||| | | |||| |||||||||||||||| |
|
|
| T |
18218123 |
gtattattttgttgttgagcaaatagaaataatgatgtggagtgggaggtggtttgagaaaattaaaaaggaacaaagcggagagtcctaacaaaataaa |
18218222 |
T |
|
| Q |
123 |
taaagagtcgtggatgtagaaagtaagattataacaagtgggggaggggagaagtaaaagagtaatgtgtaagaaaggaagacaattatagcgaatagtg |
222 |
Q |
| |
|
||||||||||| | | |||||||||||||| || ||| |||||| |||||||||||||||||| || ||| ||| | | |||||||| ||| ||||| |
|
|
| T |
18218223 |
taaagagtcgttggtttagaaagtaagatttaaataagcgggggatgggagaagtaaaagagtagtgcgtagcaaataatggcaattataacgattagtg |
18218322 |
T |
|
| Q |
223 |
agcccaaatataaataggaatattagggattagaaatcagatttgctaatcagagaaaagggagaggaaaagcagatggagagaagcggaacccta |
318 |
Q |
| |
|
|||||| |||||||| ||||||||||| ||||||||||| |||||| || || ||||||| ||| || ||||||||||||||||| ||||||||| |
|
|
| T |
18218323 |
agcccatatataaatgagaatattaggggttagaaatcagttttgcttatgagcgaaaaggtagaagagaagcagatggagagaagtggaacccta |
18218418 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 107 - 394
Target Start/End: Complemental strand, 8809083 - 8808796
Alignment:
| Q |
107 |
gtcctaacaaaataaataaagagtcgtggatgtagaaagtaagattataacaagtgggggaggggagaagtaaaagagtaatgtgtaagaaaggaagaca |
206 |
Q |
| |
|
|||| ||||| |||||||| |||||| || |||||||||||||||| || |||||| ||||||||||||||||| ||| || |||| || |||| |
|
|
| T |
8809083 |
gtccaaacaagataaataaggagtcgagggtgtagaaagtaagatttaaataagtggtggaggggagaagtaaaattgtaggacataggaaaagaggaca |
8808984 |
T |
|
| Q |
207 |
attatagcgaatagtgagcccaaatataaataggaatattagggattagaaatcagatttgctaatcagagaaaagggagaggaaaagcagatggagaga |
306 |
Q |
| |
|
| ||| |||||||||| |||| ||||||||| ||||| ||| ||||||||||||| |||||| |||| ||||||| || | | ||||||| ||||||| |
|
|
| T |
8808983 |
accataacgaatagtgatcccagatataaataagaataatagagattagaaatcagttttgctgatcaaagaaaagagataaaagaagcagaaggagaga |
8808884 |
T |
|
| Q |
307 |
agcggaaccctagtgcagcaacatcaagtcaaaccaaaggtttctacggattcgaggtaagggggagaatctcttcatctctagggtt |
394 |
Q |
| |
|
|||||||||||||||||| | ||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |
|
|
| T |
8808883 |
ggcggaaccctagtgcagcgatatcgagtcaaaccaaaggtttctacggatttgaggtaagggggagaatctattcatctctagggtt |
8808796 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 228 - 420
Target Start/End: Complemental strand, 17339037 - 17338846
Alignment:
| Q |
228 |
aaatataaataggaatattagggattagaaatcagatttgctaatcagagaaaagggagaggaaaagcagatggagagaagcggaaccctagt-gcagca |
326 |
Q |
| |
|
||||||||||||||||||||| |||||| |||| |||||| ||||||||| ||| | || || |||| ||||||||| |||||||| | ||| || |
|
|
| T |
17339037 |
aaatataaataggaatattagaatttagaagtcagttttgctggacagagaaaaaggaaaagagaaacaga--gagagaagcagaaccctaattgcaaca |
17338940 |
T |
|
| Q |
327 |
acatcaagtcaaaccaaaggtttctacggattcgaggtaagggggagaatctcttcatctctagggtttaatattttgttgtggggatgtaaag |
420 |
Q |
| |
|
|||||||| ||||| ||| ||| ||||| | ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17338939 |
acatcaagcaaaaccgaagattttgacggagttgaggtaaatgggagaatctctttatctctagggtttaatattttgttgtggggatgtaaag |
17338846 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 417
Target Start/End: Complemental strand, 11332646 - 11332589
Alignment:
| Q |
360 |
gaggtaagggggagaatctcttcatctctagggtttaatattttgttgtggggatgta |
417 |
Q |
| |
|
|||||||| |||||||||||||||||| ||||||| ||| | ||||| ||||| |||| |
|
|
| T |
11332646 |
gaggtaagagggagaatctcttcatctatagggttaaatttattgttttggggttgta |
11332589 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0166 (Bit Score: 182; Significance: 3e-98; HSPs: 1)
Name: scaffold0166
Description:
Target: scaffold0166; HSP #1
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 24 - 380
Target Start/End: Complemental strand, 3773 - 3417
Alignment:
| Q |
24 |
gtattattttattgttgagaaaatagaaataatgacgtggagtgggaggtggtttgagagaattaaaaggaacgaggaggagtgtcctaacaaaataaat |
123 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||| |||||| ||||||||| ||||||| |
|
|
| T |
3773 |
gtattattttgttgttgagaaaatagaaataatggtgtggagtgggaggtggtttgagaaaattaaa-ggaacgaagaggagagtcctaacacaataaat |
3675 |
T |
|
| Q |
124 |
aaagagtcgtggatgtagaaagtaagattataacaagtgggggaggggagaagtaaaagagtaatgtgtaagaaaggaagacaattatagcgaatagtga |
223 |
Q |
| |
|
|||||||||||| |||||||||||||||| ||| |||||||||| | |||||||||||||||| || ||| ||||| ||| |||||||| || |||||| |
|
|
| T |
3674 |
aaagagtcgtgggtgtagaaagtaagattttaataagtgggggacgagagaagtaaaagagtagtgcgtaggaaagaaaggaaattatagagattagtga |
3575 |
T |
|
| Q |
224 |
gcccaaatataaataggaatattagggattagaaatcagattt-gctaatcagagaaaagggagaggaaaagcagatggagagaagcggaaccctagtgc |
322 |
Q |
| |
|
|| || |||||||||||||||||| |||||||||||||| ||| ||| ||||||||||||||||| || |||| | |||||||| | |||||||||||| |
|
|
| T |
3574 |
gctcatatataaataggaatattatggattagaaatcagttttggctgatcagagaaaagggagaagaggagcatagggagagaacctgaaccctagtgc |
3475 |
T |
|
| Q |
323 |
agcaacatcaagtcaaaccaaaggtttctacggattcgaggtaagggggagaatctct |
380 |
Q |
| |
|
| ||||| | || |||||| |||||||||| |||||||||||||| ||| |||||||| |
|
|
| T |
3474 |
aacaacaccgagccaaaccgaaggtttctaaggattcgaggtaagagggggaatctct |
3417 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 182; Significance: 3e-98; HSPs: 4)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 24 - 380
Target Start/End: Complemental strand, 24761276 - 24760920
Alignment:
| Q |
24 |
gtattattttattgttgagaaaatagaaataatgacgtggagtgggaggtggtttgagagaattaaaaggaacgaggaggagtgtcctaacaaaataaat |
123 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||| |||||| ||||||||| ||||||| |
|
|
| T |
24761276 |
gtattattttgttgttgagaaaatagaaataatggtgtggagtgggaggtggtttgagaaaattaaa-ggaacgaagaggagagtcctaacacaataaat |
24761178 |
T |
|
| Q |
124 |
aaagagtcgtggatgtagaaagtaagattataacaagtgggggaggggagaagtaaaagagtaatgtgtaagaaaggaagacaattatagcgaatagtga |
223 |
Q |
| |
|
|||||||||||| |||||||||||||||| ||| |||||||||| | |||||||||||||||| || ||| ||||| ||| |||||||| || |||||| |
|
|
| T |
24761177 |
aaagagtcgtgggtgtagaaagtaagattttaataagtgggggacgagagaagtaaaagagtagtgcgtaggaaagaaaggaaattatagagattagtga |
24761078 |
T |
|
| Q |
224 |
gcccaaatataaataggaatattagggattagaaatcagattt-gctaatcagagaaaagggagaggaaaagcagatggagagaagcggaaccctagtgc |
322 |
Q |
| |
|
|| || |||||||||||||||||| |||||||||||||| ||| ||| ||||||||||||||||| || |||| | |||||||| | |||||||||||| |
|
|
| T |
24761077 |
gctcatatataaataggaatattatggattagaaatcagttttggctgatcagagaaaagggagaagaggagcatagggagagaacctgaaccctagtgc |
24760978 |
T |
|
| Q |
323 |
agcaacatcaagtcaaaccaaaggtttctacggattcgaggtaagggggagaatctct |
380 |
Q |
| |
|
| ||||| | || |||||| |||||||||| |||||||||||||| ||| |||||||| |
|
|
| T |
24760977 |
aacaacaccgagccaaaccgaaggtttctaaggattcgaggtaagagggggaatctct |
24760920 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 356 - 398
Target Start/End: Original strand, 23950022 - 23950064
Alignment:
| Q |
356 |
attcgaggtaagggggagaatctcttcatctctagggtttaat |
398 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
23950022 |
attcgaggtaagggggagaatcttttcatctctagggtttaat |
23950064 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 354 - 418
Target Start/End: Original strand, 24829911 - 24829974
Alignment:
| Q |
354 |
ggattcgaggtaagggggagaatctcttcatctctagggtttaatattttgttgtggggatgtaa |
418 |
Q |
| |
|
||||||||||||||||| |||||| |||||||||||||||||| ||||| |||||||| ||||| |
|
|
| T |
24829911 |
ggattcgaggtaagggg-agaatcgcttcatctctagggtttattatttcattgtggggctgtaa |
24829974 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 354 - 421
Target Start/End: Original strand, 22484807 - 22484873
Alignment:
| Q |
354 |
ggattcgaggtaagggggagaatctcttcatctctagggtttaatattttgttgtggggatgtaaagg |
421 |
Q |
| |
|
|||||||||||| |||| ||||||||||||||| ||||||||| ||||| ||||| || |||||||| |
|
|
| T |
22484807 |
ggattcgaggtatgggg-agaatctcttcatctttagggtttatcattttattgtgaggttgtaaagg |
22484873 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0145 (Bit Score: 163; Significance: 7e-87; HSPs: 1)
Name: scaffold0145
Description:
Target: scaffold0145; HSP #1
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 24 - 396
Target Start/End: Complemental strand, 15084 - 14717
Alignment:
| Q |
24 |
gtattattttattgttgagaaaatagaaataatgacgtggagtgggaggtggtttgagagaattaaaaggaacgaggaggagtgtcctaacaaaataaat |
123 |
Q |
| |
|
|||||||||| ||| | || ||||||||||||||| |||||||||||||||||| ||| |||||||||| |||||| ||| ||||||||||||| |
|
|
| T |
15084 |
gtattattttgttggtaagtaaatagaaataatgatttggagtgggaggtggtttaaga------aaaggaacgaagaggagagtcttaacaaaataaat |
14991 |
T |
|
| Q |
124 |
aaagagtcgtggatgtagaaagtaagattataacaagtgggggaggggagaagtaaaagagtaatgtgtaagaaaggaagacaattatagcgaatagtga |
223 |
Q |
| |
|
|||||||||||| ||||||||||||| || ||| ||||||||||||||||||||||||||||| || || |||| ||| |||| ||| | |||||| |
|
|
| T |
14990 |
aaagagtcgtgggtgtagaaagtaagtttttaataagtgggggaggggagaagtaaaagagtagtgcataggaaataaaggtaattctagatattagtga |
14891 |
T |
|
| Q |
224 |
gcccaaatataaataggaatattagggattagaaatcagatttg-ctaatcagagaaaagggagaggaaaagcagatggagagaagcggaaccctagtgc |
322 |
Q |
| |
|
||||| |||| ||||||||||||||||||||||||||| |||| ||||| |||||||||||||| | ||||| | || ||||| ||||||||| ||| |
|
|
| T |
14890 |
gcccatttatatataggaatattagggattagaaatcagttttggctaataagagaaaagggagaaaagaagcaaagagaaagaagtggaaccctactgc |
14791 |
T |
|
| Q |
323 |
agcaacatcaagtcaaaccaaaggtttctacggattcgaggtaagggggagaatctcttcatctctagggttta |
396 |
Q |
| |
|
||||||||| |||||||||||| |||||||||| |||||||||||||||||||||| ||||||| ||||||||| |
|
|
| T |
14790 |
agcaacatcgagtcaaaccaaatgtttctacgggttcgaggtaagggggagaatctattcatctatagggttta |
14717 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 97; Significance: 2e-47; HSPs: 4)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 275 - 447
Target Start/End: Complemental strand, 15119111 - 15118940
Alignment:
| Q |
275 |
gagaaaagggagaggaaaagcagatggagagaagcggaaccctagtgcagcaacatcaagtcaaaccaaaggtttctacggattcgaggtaagggggaga |
374 |
Q |
| |
|
||||||||||||| |||||| ||| |||||||||| ||||||||||||||||||||| || ||| | |||||||||||| ||||||||||||||| ||| |
|
|
| T |
15119111 |
gagaaaagggagaagaaaagaagacggagagaagcagaaccctagtgcagcaacatcgagctaaatcgaaggtttctacg-attcgaggtaaggggaaga |
15119013 |
T |
|
| Q |
375 |
atctcttcatctctagggtttaatattttgttgtggggatgtaaaggggttatactaagagtgttgttatgat |
447 |
Q |
| |
|
||||||||||||||||| |||||||||| ||||||| |||||||||||||||| || |||||||||||||| |
|
|
| T |
15119012 |
atctcttcatctctaggatttaatatttgtttgtgggaatgtaaaggggttataatagtagtgttgttatgat |
15118940 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 354 - 418
Target Start/End: Original strand, 7680599 - 7680663
Alignment:
| Q |
354 |
ggattcgaggtaagggggagaatctcttcatctctagggtttaatattttgttgtggggatgtaa |
418 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||| ||||| |
|
|
| T |
7680599 |
ggattcgaggtaagggggagaatctcttcatgtctagggtttattatttcattgtggggctgtaa |
7680663 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 361 - 423
Target Start/End: Original strand, 20145859 - 20145921
Alignment:
| Q |
361 |
aggtaagggggagaatctcttcatctctagggtttaatattttgttgtggggatgtaaagggg |
423 |
Q |
| |
|
|||||||||| ||||||||||||||||| ||||||| |||| |||||||||| | |||||||| |
|
|
| T |
20145859 |
aggtaaggggaagaatctcttcatctcttgggtttactattctgttgtggggctttaaagggg |
20145921 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 361 - 423
Target Start/End: Complemental strand, 22186980 - 22186918
Alignment:
| Q |
361 |
aggtaagggggagaatctcttcatctctagggtttaatattttgttgtggggatgtaaagggg |
423 |
Q |
| |
|
|||||||||| ||||||||||||||||| ||||||| |||| |||||||||| | |||||||| |
|
|
| T |
22186980 |
aggtaaggggaagaatctcttcatctcttgggtttactattctgttgtggggctttaaagggg |
22186918 |
T |
|
Back To:
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Target: chr8 (Bit Score: 65; Significance: 2e-28; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 112 - 392
Target Start/End: Complemental strand, 17883558 - 17883280
Alignment:
| Q |
112 |
aacaaaataaataaagagtcgtggatgtagaaagtaagattataacaagtgggggaggggagaagtaaaagagtaatgtgtaagaaaggaagacaattat |
211 |
Q |
| |
|
||||| ||||||||||||||| |||| ||| ||||| ||| || ||||||||||||| |||||||||| ||| | ||| ||||||| || || || |
|
|
| T |
17883558 |
aacaagataaataaagagtcggagatgcagagagtaatatttaaataagtgggggagggaagaagtaaaattgtagcgcgtaggaaaggaggaaaaccat |
17883459 |
T |
|
| Q |
212 |
agcgaatagtgagcccaaatataaataggaatattagggattagaaatcagatttgctaatcagagaaaagggagaggaaaagcagatggagagaagcgg |
311 |
Q |
| |
|
| |||||| |||| ||| | ||||| |||| |||||||||||||||||| |||| | ||| | | |||| |||| || ||||||| |||||||| ||| |
|
|
| T |
17883458 |
aacgaatattgagaccatgtttaaatgagaatgttagggattagaaatcagttttgttgatccggggaaagagagaagagaagcagaaggagagaaacgg |
17883359 |
T |
|
| Q |
312 |
aaccctagtgcagcaacatcaagtcaaaccaaaggtttctacggattcgaggtaagggggagaatctcttcatctctaggg |
392 |
Q |
| |
|
|||||||||||| | | | || |||||| |||||||||| ||||||||||||| ||||||||||| ||||||| ||||| |
|
|
| T |
17883358 |
aaccctagtgcattga-accgagccaaaccgaaggtttctatggattcgaggtaa-ggggagaatctattcatctataggg |
17883280 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 330 - 396
Target Start/End: Complemental strand, 22554047 - 22553981
Alignment:
| Q |
330 |
tcaagtcaaaccaaaggtttctacggattcgaggtaagggggagaatctcttcatctctagggttta |
396 |
Q |
| |
|
||||| |||||||||| |||| ||| ||| ||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
22554047 |
tcaagccaaaccaaagatttcgacgaatttgaggtaagggggagaatctattcatctctagggttta |
22553981 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 356 - 403
Target Start/End: Original strand, 26859181 - 26859228
Alignment:
| Q |
356 |
attcgaggtaagggggagaatctcttcatctctagggtttaatatttt |
403 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||| |||||| |
|
|
| T |
26859181 |
attcgaggtaagggggagaatctcttcatctctagggcttattatttt |
26859228 |
T |
|
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Target: scaffold0218 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0218
Description:
Target: scaffold0218; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 358 - 448
Target Start/End: Complemental strand, 16624 - 16534
Alignment:
| Q |
358 |
tcgaggtaagggggagaatctcttcatctctagggtttaatattttgttgtggggatgtaaaggggttatactaagagtgttgttatgatg |
448 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||| | || |||||||||||||||| |
|
|
| T |
16624 |
tcgaggtaagggggagaatctcttcatctctagggtttaatatttttctgtagggttgtaaaggggttagagtatgagtgttgttatgatg |
16534 |
T |
|
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Target: scaffold0091 (Bit Score: 59; Significance: 8e-25; HSPs: 1)
Name: scaffold0091
Description:
Target: scaffold0091; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 358 - 448
Target Start/End: Complemental strand, 31276 - 31186
Alignment:
| Q |
358 |
tcgaggtaagggggagaatctcttcatctctagggtttaatattttgttgtggggatgtaaaggggttatactaagagtgttgttatgatg |
448 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||||||| | ||| |||||||||||| | || |||||||||||||||| |
|
|
| T |
31276 |
tcgaggtaagggggagaatctcttcatctctagggtttattattttgtttttgggttgtaaaggggttggagtatgagtgttgttatgatg |
31186 |
T |
|
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Target: scaffold0063 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0063
Description:
Target: scaffold0063; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 358 - 448
Target Start/End: Original strand, 26065 - 26155
Alignment:
| Q |
358 |
tcgaggtaagggggagaatctcttcatctctagggtttaatattttgttgtggggatgtaaaggggttatactaagagtgttgttatgatg |
448 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||||| | | ||| |||||||||||| | || |||||||||||||||| |
|
|
| T |
26065 |
tcgaggtaagggggagaatctcttcatctctagggtttattattttgctatagggttgtaaaggggttggagtatgagtgttgttatgatg |
26155 |
T |
|
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Target: scaffold0003 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0003
Description:
Target: scaffold0003; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 358 - 448
Target Start/End: Complemental strand, 132810 - 132720
Alignment:
| Q |
358 |
tcgaggtaagggggagaatctcttcatctctagggtttaatattttgttgtggggatgtaaaggggttatactaagagtgttgttatgatg |
448 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||| |||||||||||| | || |||| ||||||||||| |
|
|
| T |
132810 |
tcgaggtaagggggagaatctcttcatttctagggtttattattttgttgtagggttgtaaaggggttggaatatgagttttgttatgatg |
132720 |
T |
|
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Target: chr1 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 358 - 448
Target Start/End: Original strand, 51624858 - 51624947
Alignment:
| Q |
358 |
tcgaggtaagggggagaatctcttcatctctagggtttaatattttgttgtggggatgtaaaggggttatactaagagtgttgttatgatg |
448 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| |||||||||||||| ||| ||| ||||||||||||| | || |||||||||||||||| |
|
|
| T |
51624858 |
tcgaggtaaggggg-gaatctcttcatctctaaggtttaatattttgctgtagggttgtaaaggggttagagtatgagtgttgttatgatg |
51624947 |
T |
|
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Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 325 - 406
Target Start/End: Original strand, 24852651 - 24852730
Alignment:
| Q |
325 |
caacatcaagtcaaaccaaaggtttctacggattcgaggtaagggggagaatctcttcatctctagggtttaatattttgtt |
406 |
Q |
| |
|
||||| |||| ||||||| || |||| ||||||||||||||||||| |||||||||||||| |||| ||| || ||||||| |
|
|
| T |
24852651 |
caacaacaagccaaaccagagatttcgacggattcgaggtaagggg--gaatctcttcatctttaggatttgattttttgtt |
24852730 |
T |
|
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Target: scaffold0061 (Bit Score: 54; Significance: 8e-22; HSPs: 2)
Name: scaffold0061
Description:
Target: scaffold0061; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 363 - 448
Target Start/End: Original strand, 16665 - 16750
Alignment:
| Q |
363 |
gtaagggggagaatctcttcatctctagggtttaatattttgttgtggggatgtaaaggggttatactaagagtgttgttatgatg |
448 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||| ||| ||| |||||||||||| | || |||||||||||||||| |
|
|
| T |
16665 |
gtaagggggagaatctcttcatctctagggtttattattttgctgtagggttgtaaaggggttggagtatgagtgttgttatgatg |
16750 |
T |
|
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Target: scaffold0061; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 363 - 448
Target Start/End: Original strand, 25723 - 25808
Alignment:
| Q |
363 |
gtaagggggagaatctcttcatctctagggtttaatattttgttgtggggatgtaaaggggttatactaagagtgttgttatgatg |
448 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||| ||| ||| |||||||||||| | || |||||||||||||||| |
|
|
| T |
25723 |
gtaagggggagaatctcttcatctctagggtttattattttgctgtagggttgtaaaggggttggagtatgagtgttgttatgatg |
25808 |
T |
|
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Target: scaffold0054 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0054
Description:
Target: scaffold0054; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 356 - 421
Target Start/End: Complemental strand, 71376 - 71311
Alignment:
| Q |
356 |
attcgaggtaagggggagaatctcttcatctctagggtttaatattttgttgtggggatgtaaagg |
421 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||| |||| |||||||||| | |||||| |
|
|
| T |
71376 |
attcgaggtaagggggagaatctcttcatctcttgggtttactattctgttgtggggctttaaagg |
71311 |
T |
|
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Target: scaffold0601 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0601
Description:
Target: scaffold0601; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 356 - 420
Target Start/End: Original strand, 4127 - 4191
Alignment:
| Q |
356 |
attcgaggtaagggggagaatctcttcatctctagggtttaatattttgttgtggggatgtaaag |
420 |
Q |
| |
|
|||||||||||||| ||||||||||||||| ||||||||| |||||| |||||||| ||||||| |
|
|
| T |
4127 |
attcgaggtaagggagagaatctcttcatccttagggtttattattttattgtggggctgtaaag |
4191 |
T |
|
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