View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21116_high_4 (Length: 215)

Name: NF21116_high_4
Description: NF21116
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21116_high_4
NF21116_high_4
[»] chr8 (9 HSPs)
chr8 (1-199)||(3050800-3050998)
chr8 (73-179)||(3063214-3063320)
chr8 (73-154)||(3037267-3037347)
chr8 (5-75)||(43036720-43036792)
chr8 (5-74)||(15213084-15213155)
chr8 (5-70)||(3303474-3303541)
chr8 (5-74)||(4743027-4743098)
chr8 (20-75)||(3231645-3231700)
chr8 (6-75)||(4731957-4732027)
[»] chr3 (9 HSPs)
chr3 (5-75)||(29196188-29196260)
chr3 (7-76)||(29813361-29813432)
chr3 (5-74)||(21350811-21350881)
chr3 (5-74)||(27305519-27305587)
chr3 (5-75)||(32891388-32891459)
chr3 (5-75)||(761142-761212)
chr3 (5-75)||(22834806-22834877)
chr3 (5-75)||(29811166-29811238)
chr3 (5-75)||(39153163-39153235)
[»] chr5 (7 HSPs)
chr5 (5-74)||(13488498-13488569)
chr5 (5-74)||(28750455-28750526)
chr5 (5-75)||(534056-534128)
chr5 (5-77)||(30682719-30682793)
chr5 (7-72)||(32637123-32637190)
chr5 (5-75)||(3075548-3075620)
chr5 (5-74)||(39468348-39468419)
[»] chr7 (12 HSPs)
chr7 (8-75)||(18126947-18127016)
chr7 (5-76)||(23555339-23555412)
chr7 (5-75)||(4586459-4586531)
chr7 (5-74)||(26417614-26417685)
chr7 (7-75)||(14069632-14069702)
chr7 (7-75)||(14379660-14379730)
chr7 (5-74)||(41317238-41317309)
chr7 (5-74)||(47675936-47676007)
chr7 (8-74)||(31105200-31105267)
chr7 (8-70)||(43864545-43864609)
chr7 (5-74)||(19502476-19502547)
chr7 (5-74)||(31732768-31732839)
[»] chr4 (10 HSPs)
chr4 (5-75)||(5350199-5350269)
chr4 (5-75)||(12739352-12739424)
chr4 (5-74)||(26175436-26175507)
chr4 (5-75)||(12743727-12743799)
chr4 (8-72)||(53345480-53345544)
chr4 (5-75)||(5872115-5872184)
chr4 (5-75)||(9927257-9927329)
chr4 (5-75)||(46147194-46147266)
chr4 (5-75)||(52082462-52082533)
chr4 (5-74)||(48893443-48893513)
[»] chr6 (3 HSPs)
chr6 (12-75)||(14521477-14521541)
chr6 (5-36)||(5406042-5406073)
chr6 (5-36)||(5410367-5410398)
[»] chr1 (12 HSPs)
chr1 (5-74)||(13137780-13137851)
chr1 (5-75)||(28220025-28220097)
chr1 (5-75)||(31659536-31659607)
chr1 (5-75)||(37559663-37559735)
chr1 (5-73)||(30476247-30476317)
chr1 (8-75)||(23555070-23555138)
chr1 (5-74)||(927785-927853)
chr1 (5-75)||(4552447-4552519)
chr1 (5-75)||(8550583-8550654)
chr1 (5-75)||(28223220-28223292)
chr1 (5-74)||(196710-196780)
chr1 (5-74)||(833970-834040)
[»] chr2 (10 HSPs)
chr2 (7-75)||(11690787-11690857)
chr2 (5-74)||(39285132-39285202)
chr2 (8-74)||(29868169-29868237)
chr2 (4-75)||(2838242-2838314)
chr2 (5-76)||(36987873-36987945)
chr2 (5-75)||(723546-723617)
chr2 (5-75)||(34139572-34139643)
chr2 (5-75)||(36317812-36317884)
chr2 (5-74)||(6594804-6594874)
chr2 (5-74)||(42362643-42362713)
[»] scaffold0219 (1 HSPs)
scaffold0219 (39-75)||(27249-27285)


Alignment Details
Target: chr8 (Bit Score: 199; Significance: 1e-108; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 3050998 - 3050800
Alignment:
Q  1 attgtggttactacttttctttactccacacatcattatttattggtgtgagatttgagtcccaattcacaacaactgttaatggttctaaggctttctt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3050998 attgtggttactacttttctttactccacacatcattatttattggtgtgagatttgagtcccaattcacaacaactgttaatggttctaaggctttctt 3050899  T
Q  101 aaaagtgagaagagataatgcctcccatggttccaccataactgtctcaaattagtattaattgttctctaaataagttatgtctttgtatgaacaaac 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3050898 aaaagtgagaagagataatgcctcccatggttccaccataactgtctcaaattagtattaattgttctctaaataagttatgtctttgtatgaacaaac 3050800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 73 - 179
Target Start/End: Complemental strand, 3063320 - 3063214
Alignment:
Q  73 caactgttaatggttctaaggctttcttaaaagtgagaagagataatgcctcccatggttccaccataactgtctcaaattagtattaattgttctctaa 172  Q
    ||||| |||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||| || ||||| |||||||||||||| | ||||||||    
T  3063320 caactcttaatggtgctaaggctttcttgaaagtgagaaaagataatgcctcccatggttccaccgtacctgtcacaaattagtattaaatattctctaa 3063221  T
Q  173 ataagtt 179  Q
    | |||||    
T  3063220 acaagtt 3063214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 73 - 154
Target Start/End: Complemental strand, 3037347 - 3037267
Alignment:
Q  73 caactgttaatggttctaaggctttcttaaaagtgagaagagataatgcctcccatggttccaccataactgtctcaaatta 154  Q
    ||||| |||||||| ||||||||||||| ||| |||||| ||||||| ||| |||||||||||||||||| |||||||||||    
T  3037347 caactcttaatggtgctaaggctttcttgaaaatgagaaaagataatacct-ccatggttccaccataaccgtctcaaatta 3037267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 43036720 - 43036792
Alignment:
Q  5 tggttactacttttctttactccacacatcattatt--tattggtgtgagatttgagtcccaattcacaacaa 75  Q
    ||||||||||||| |||| |||||||||||||| ||  |||||||||||| ||||||||| |||||| |||||    
T  43036720 tggttactactttcctttgctccacacatcattttttgtattggtgtgagttttgagtccaaattcataacaa 43036792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 15213084 - 15213155
Alignment:
Q  5 tggttactacttttctttactccacacatcattattt--attggtgtgagatttgagtcccaattcacaaca 74  Q
    ||||||||||||| |||| |||||||||||||  |||  ||||||||||| ||||||||| |||||||||||    
T  15213084 tggttactactttcctttgctccacacatcatagtttgtattggtgtgagttttgagtccgaattcacaaca 15213155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 3303541 - 3303474
Alignment:
Q  5 tggttactacttttctttactccacacatcattattt--attggtgtgagatttgagtcccaattcac 70  Q
    ||||||| ||||| |||| |||||||||||||  |||  ||||||||||||||||||||| |||||||    
T  3303541 tggttaccactttcctttgctccacacatcatagtttgtattggtgtgagatttgagtccgaattcac 3303474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 4743098 - 4743027
Alignment:
Q  5 tggttactacttttctttactccacacatcattattt--attggtgtgagatttgagtcccaattcacaaca 74  Q
    ||||||| ||||| |||| |||||||||| ||  |||  ||||||||||||||||||||| |||||||||||    
T  4743098 tggttaccactttcctttgctccacacattatagtttgtattggtgtgagatttgagtccgaattcacaaca 4743027  T

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Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 3231700 - 3231645
Alignment:
Q  20 tttactccacacatcattatttattggtgtgagatttgagtcccaattcacaacaa 75  Q
    |||||||||||||||    ||||||||||||||||| |||||| ||||||||||||    
T  3231700 tttactccacacatccaagtttattggtgtgagattagagtccgaattcacaacaa 3231645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 75
Target Start/End: Original strand, 4731957 - 4732027
Alignment:
Q  6 ggttactacttttctttactccacacatcattatt--tattggtgtgagatttgagtcccaattcacaacaa 75  Q
    |||||||||||| |||| |||||||||||||| ||  |||||||||||  ||||||| | ||||||||||||    
T  4731957 ggttactactttcctttgctccacacatcattgtttgtattggtgtga-ttttgagttcgaattcacaacaa 4732027  T

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Target: chr3 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 29196260 - 29196188
Alignment:
Q  5 tggttactacttttctttactccacacatcattattt--attggtgtgagatttgagtcccaattcacaacaa 75  Q
    ||||||||||||| |||| |||||||||||||  |||  ||||||||||||||||||||| ||||||||||||    
T  29196260 tggttactactttcctttgctccacacatcatagtttgtattggtgtgagatttgagtccgaattcacaacaa 29196188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 76
Target Start/End: Original strand, 29813361 - 29813432
Alignment:
Q  7 gttactacttttctttactccacacatcattattt--attggtgtgagatttgagtcccaattcacaacaac 76  Q
    |||||||||||||||| |||||||||||||  |||  ||||||||||| ||||||||| |||||||||||||    
T  29813361 gttactacttttctttgctccacacatcatagtttgtattggtgtgagttttgagtccgaattcacaacaac 29813432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 21350881 - 21350811
Alignment:
Q  5 tggttactacttttctttactccacacatcattattt-attggtgtgagatttgagtcccaattcacaaca 74  Q
    ||||||||||||| |||| || |||||||| |||||| ||||||||||| ||||||||| |||||||||||    
T  21350881 tggttactactttcctttgcttcacacatctttatttcattggtgtgagttttgagtccgaattcacaaca 21350811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 27305587 - 27305519
Alignment:
Q  5 tggttactacttttctttactccacacatcattatttattggtgtgagatttgagtcccaattcacaaca 74  Q
    ||||||||||||| |||| |||||||||||||  |||||||||||||  ||||||||| |||||||||||    
T  27305587 tggttactactttcctttgctccacacatcatagtttattggtgtga-ttttgagtccgaattcacaaca 27305519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 32891388 - 32891459
Alignment:
Q  5 tggttactacttttctttactccacacatcattattt-attggtgtgagatttgagtcccaattcacaacaa 75  Q
    ||||||||||||| |||| |||||||||||||  ||| ||||||||||| ||||||||| || |||||||||    
T  32891388 tggttactactttcctttgctccacacatcatagtttcattggtgtgagttttgagtccgaagtcacaacaa 32891459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 761142 - 761212
Alignment:
Q  5 tggttactacttttctttactccacacatcat--tatttattggtgtgagatttgagtcccaattcacaacaa 75  Q
    ||||||||||||| |||| |||||||||||||  | | |||||||||  ||||||||||| ||||||||||||    
T  761142 tggttactactttcctttgctccacacatcatagtttgtattggtgt--gatttgagtccgaattcacaacaa 761212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 22834877 - 22834806
Alignment:
Q  5 tggttactacttttctttactccacacatcat--tatttattggtgtgagatttgagtcccaattcacaacaa 75  Q
    ||||||||||||| |||| |||||||||||||  | | |||||||||||  ||||||||| ||||||||||||    
T  22834877 tggttactactttcctttgctccacacatcatagtttgtattggtgtga-ttttgagtccgaattcacaacaa 22834806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 29811166 - 29811238
Alignment:
Q  5 tggttactacttttctttactccacacatcattattt--attggtgtgagatttgagtcccaattcacaacaa 75  Q
    ||||||||||||| |||| ||||||| |||||  |||  ||||||||||| ||||||| | ||||||||||||    
T  29811166 tggttactactttcctttgctccacaaatcatattttgtattggtgtgagttttgagttcgaattcacaacaa 29811238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 39153235 - 39153163
Alignment:
Q  5 tggttactacttttctttactccacacatcat--tatttattggtgtgagatttgagtcccaattcacaacaa 75  Q
    ||||||||||||| |||| |||||||||||||  | | |||||||||||| |||||| || ||||| ||||||    
T  39153235 tggttactactttcctttgctccacacatcatagtttgtattggtgtgagttttgagcccgaattctcaacaa 39153163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 13488498 - 13488569
Alignment:
Q  5 tggttactacttttctttactccacacatcattattt--attggtgtgagatttgagtcccaattcacaaca 74  Q
    |||||| |||||| ||||||||||||||||||  |||  ||||||||||||||||||||| |||||||||||    
T  13488498 tggttattactttcctttactccacacatcatattttgtattggtgtgagatttgagtccgaattcacaaca 13488569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 28750526 - 28750455
Alignment:
Q  5 tggttactacttttctttactccacacatcattattt--attggtgtgagatttgagtcccaattcacaaca 74  Q
    ||||||||||||| |||| ||||||||||||| ||||  ||||||||||| ||||||||| |||||||||||    
T  28750526 tggttactactttcctttgctccacacatcataatttgtattggtgtgagttttgagtccaaattcacaaca 28750455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 534056 - 534128
Alignment:
Q  5 tggttactacttttctttactccacacatcattattt--attggtgtgagatttgagtcccaattcacaacaa 75  Q
    ||||||||||||| |||| |||||||||||||  |||  ||||||||||| ||||||||| ||||||||||||    
T  534056 tggttactactttcctttgctccacacatcatagtttctattggtgtgagttttgagtccgaattcacaacaa 534128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 30682793 - 30682719
Alignment:
Q  5 tggttactacttttctttactccacacatcattattt--attggtgtgagatttgagtcccaattcacaacaact 77  Q
    ||||||||||||| |||| |||||||||||||  |||  ||||||||||| |||||||||  |||||||||||||    
T  30682793 tggttactactttcctttgctccacacatcatagtttgtattggtgtgagttttgagtccgtattcacaacaact 30682719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 32637123 - 32637190
Alignment:
Q  7 gttactacttttctttactccacacatcat--tatttattggtgtgagatttgagtcccaattcacaa 72  Q
    ||||||||||| ||||||||||||||||||  | | |||||||||||| ||||| ||| |||||||||    
T  32637123 gttactactttcctttactccacacatcatagtttgtattggtgtgagttttgaatccgaattcacaa 32637190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 3075620 - 3075548
Alignment:
Q  5 tggttactacttttctttactccacacatcattattt--attggtgtgagatttgagtcccaattcacaacaa 75  Q
    |||||| |||||| |||| |||||||||||||  |||  ||||||||||| ||| ||||| ||||||||||||    
T  3075620 tggttattactttcctttgctccacacatcatagtttgtattggtgtgagtttttagtccgaattcacaacaa 3075548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 39468419 - 39468348
Alignment:
Q  5 tggttactacttttctttactccacacatcat--tatttattggtgtgagatttgagtcccaattcacaaca 74  Q
    ||||||||||||| |||| |||||||||||||  | | ||||||||| || ||||||| | |||||||||||    
T  39468419 tggttactactttcctttgctccacacatcatagtttgtattggtgtaagttttgagttcgaattcacaaca 39468348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 75
Target Start/End: Original strand, 18126947 - 18127016
Alignment:
Q  8 ttactacttttctttactccacacatcattattt--attggtgtgagatttgagtcccaattcacaacaa 75  Q
    |||||||||| ||||||||||||||||||  |||  ||||||||||| ||||||||| ||||||||||||    
T  18126947 ttactactttcctttactccacacatcatagtttgtattggtgtgagttttgagtccgaattcacaacaa 18127016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 76
Target Start/End: Original strand, 23555339 - 23555412
Alignment:
Q  5 tggttactacttttctttactccacacatcattattt--attggtgtgagatttgagtcccaattcacaacaac 76  Q
    ||||||||||||| |||| |||||||||||||  |||  ||||||||||| ||||||||| |||||||||||||    
T  23555339 tggttactactttcctttgctccacacatcatagtttgtattggtgtgagttttgagtccgaattcacaacaac 23555412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 4586459 - 4586531
Alignment:
Q  5 tggttactacttttctttactccacacatcattattta--ttggtgtgagatttgagtcccaattcacaacaa 75  Q
    ||||||| ||||| |||| |||||||||||||  ||||  |||||||||||||||||||| ||||||||||||    
T  4586459 tggttaccactttcctttgctccacacatcatagtttacattggtgtgagatttgagtccgaattcacaacaa 4586531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 26417614 - 26417685
Alignment:
Q  5 tggttactacttttctttactccacacatcattattt--attggtgtgagatttgagtcccaattcacaaca 74  Q
    ||||||||||||| |||||||||||| |||||  |||  ||||||||||| ||||||||| |||||||||||    
T  26417614 tggttactactttcctttactccacatatcatagtttgtattggtgtgagttttgagtccgaattcacaaca 26417685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 14069702 - 14069632
Alignment:
Q  7 gttactacttttctttactccacacatcattattt--attggtgtgagatttgagtcccaattcacaacaa 75  Q
    ||||||||||| |||| |||||||||||||  |||  ||||||||||| ||||||||| ||||||||||||    
T  14069702 gttactactttcctttgctccacacatcatagtttgtattggtgtgagttttgagtccgaattcacaacaa 14069632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 14379730 - 14379660
Alignment:
Q  7 gttactacttttctttactccacacatcattattt--attggtgtgagatttgagtcccaattcacaacaa 75  Q
    ||||||||||| |||| |||||||||||||  |||  ||||||||||| ||||||||| ||||||||||||    
T  14379730 gttactactttcctttgctccacacatcatagtttgtattggtgtgagttttgagtccgaattcacaacaa 14379660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 41317309 - 41317238
Alignment:
Q  5 tggttactacttttctttactccacacatcattattt--attggtgtgagatttgagtcccaattcacaaca 74  Q
    ||||||||||||| |||| ||||| |||||||  |||  ||||||||||||||||||| | |||||||||||    
T  41317309 tggttactactttcctttgctccaaacatcatagtttgtattggtgtgagatttgagttcgaattcacaaca 41317238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 47676007 - 47675936
Alignment:
Q  5 tggttactacttttctttactccacacatcat--tatttattggtgtgagatttgagtcccaattcacaaca 74  Q
    ||||||||||||| |||| |||||||||||||  | | |||||||||||| |||| |||| |||||||||||    
T  47676007 tggttactactttcctttgctccacacatcatagtttgtattggtgtgagttttgtgtccgaattcacaaca 47675936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 74
Target Start/End: Complemental strand, 31105267 - 31105200
Alignment:
Q  8 ttactacttttctttactccacacatcat-tatttattggtgtgagatttgagtcccaattcacaaca 74  Q
    |||||||||| ||||||||||||||||||   |||||||||||||| |||| || | |||||||||||    
T  31105267 ttactactttcctttactccacacatcatagttttattggtgtgagttttgtgttcgaattcacaaca 31105200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 8 - 70
Target Start/End: Original strand, 43864545 - 43864609
Alignment:
Q  8 ttactacttttctttactccacacatcattattt--attggtgtgagatttgagtcccaattcac 70  Q
    |||| ||||| ||||||||||||||||||  |||  ||||||||||| ||||||||| |||||||    
T  43864545 ttaccactttcctttactccacacatcatagtttgtattggtgtgagttttgagtccgaattcac 43864609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 19502476 - 19502547
Alignment:
Q  5 tggttactacttttctttactccacacatcat--tatttattggtgtgagatttgagtcccaattcacaaca 74  Q
    ||||||||||||| |||| |||||||||||||  | | |||| ||||||| ||||||||  |||||||||||    
T  19502476 tggttactactttcctttgctccacacatcatagtttgtattagtgtgagttttgagtctgaattcacaaca 19502547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 31732839 - 31732768
Alignment:
Q  5 tggttactacttttctttactccacacatcattatttat--tggtgtgagatttgagtcccaattcacaaca 74  Q
    |||||||||||||  ||| |||||||||||||  ||| |  ||||||||| ||||||||| |||||||||||    
T  31732839 tggttactactttcatttgctccacacatcatagtttgtactggtgtgagttttgagtccgaattcacaaca 31732768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 5350199 - 5350269
Alignment:
Q  5 tggttactacttttctttactccacacatcattatttattggtgtgagatttgagtcccaattcacaacaa 75  Q
    ||||||||||||| ||||||| |||||| |    |||||||||||||||||||||||| ||||||||||||    
T  5350199 tggttactactttcctttacttcacacacctaagtttattggtgtgagatttgagtccgaattcacaacaa 5350269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 12739424 - 12739352
Alignment:
Q  5 tggttactacttttctttactccacacatcattattt--attggtgtgagatttgagtcccaattcacaacaa 75  Q
    |||||||||||||  |||||||||||||||||  |||  ||||||||||| ||||||||| ||||||||||||    
T  12739424 tggttactactttcttttactccacacatcatagtttgtattggtgtgagttttgagtccgaattcacaacaa 12739352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 26175507 - 26175436
Alignment:
Q  5 tggttactacttttctttactccacacatcattattt--attggtgtgagatttgagtcccaattcacaaca 74  Q
    ||||||||||||| |||| |||||||||||||  |||  ||||||||||| ||||||||| |||||||||||    
T  26175507 tggttactactttcctttgctccacacatcatagtttgtattggtgtgagttttgagtccgaattcacaaca 26175436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 12743799 - 12743727
Alignment:
Q  5 tggttactacttttctttactccacacatcattattt--attggtgtgagatttgagtcccaattcacaacaa 75  Q
    ||||||||||||| |||| ||||||||| |||  |||  ||||||||||| ||||||||| ||||||||||||    
T  12743799 tggttactactttcctttgctccacacaacatagtttgtattggtgtgagttttgagtccgaattcacaacaa 12743727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 53345480 - 53345544
Alignment:
Q  8 ttactacttttctttactccacacatcattatttattggtgtgagatttgagtcccaattcacaa 72  Q
    |||||| ||||||||||||||||||||    |||||||||||||||||||| ||  |||||||||    
T  53345480 ttactatttttctttactccacacatctaagtttattggtgtgagatttgaatctgaattcacaa 53345544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 5872115 - 5872184
Alignment:
Q  5 tggttactacttttctttactccacacatcattatttattggtgtgagatttgagtcccaattcacaacaa 75  Q
    ||||||||||||| |||| |||||||||||| | | |||||||||||  |||||||||  |||||||||||    
T  5872115 tggttactactttcctttgctccacacatcagtttgtattggtgtga-ttttgagtccggattcacaacaa 5872184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 9927329 - 9927257
Alignment:
Q  5 tggttactacttttctttactccacacatcattatttat--tggtgtgagatttgagtcccaattcacaacaa 75  Q
    |||| |||||||| |||| |||||||||||||  |||||  ||||| ||| ||||||||| ||||||||||||    
T  9927329 tggtaactactttcctttgctccacacatcatagtttatattggtgcgagttttgagtccgaattcacaacaa 9927257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 46147266 - 46147194
Alignment:
Q  5 tggttactacttttctttactccacacatcattattt--attggtgtgagatttgagtcccaattcacaacaa 75  Q
    ||||||||||||| |||| |||||||||||||  |||  ||||||||||| |||||| |  ||||||||||||    
T  46147266 tggttactactttcctttgctccacacatcatagtttgcattggtgtgagttttgaggcggaattcacaacaa 46147194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 52082533 - 52082462
Alignment:
Q  5 tggttactacttttctttactccacacatcattatt--tattggtgtgagatttgagtcccaattcacaacaa 75  Q
    ||||||||||||| ||||  |||||||||||| |||  |||||||||||  ||||||||| ||||||||||||    
T  52082533 tggttactactttcctttgttccacacatcataatttgtattggtgtga-ttttgagtccgaattcacaacaa 52082462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 48893513 - 48893443
Alignment:
Q  5 tggttactacttttctttactccacacatcat--tatttattggtgtgagatttgagtcccaattcacaaca 74  Q
    ||||||||||||| |||| |||||||||||||  | | |||||||||||  ||||||||| |||||||||||    
T  48893513 tggttactactttcctttgctccacacatcatagtttgtattggtgtga-ttttgagtccgaattcacaaca 48893443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.000000000005; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 75
Target Start/End: Complemental strand, 14521541 - 14521477
Alignment:
Q  12 tacttttctttactccacacatcattattt-attggtgtgagatttgagtcccaattcacaacaa 75  Q
    ||||||||||| |||||||||||||  ||| ||||||||||| ||||||||| ||||||||||||    
T  14521541 tacttttctttgctccacacatcatagtttcattggtgtgagttttgagtccgaattcacaacaa 14521477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 36
Target Start/End: Complemental strand, 5406073 - 5406042
Alignment:
Q  5 tggttactacttttctttactccacacatcat 36  Q
    ||||||||||||||||||||||||||||||||    
T  5406073 tggttactacttttctttactccacacatcat 5406042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 36
Target Start/End: Complemental strand, 5410398 - 5410367
Alignment:
Q  5 tggttactacttttctttactccacacatcat 36  Q
    ||||||||||||||||||||||||||||||||    
T  5410398 tggttactacttttctttactccacacatcat 5410367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.000000000005; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 13137851 - 13137780
Alignment:
Q  5 tggttactacttttctttactccacacatcattatt--tattggtgtgagatttgagtcccaattcacaaca 74  Q
    ||||||||||||| |||| ||||||||||||| |||  |||||||||||| ||||||||| |||| ||||||    
T  13137851 tggttactactttcctttgctccacacatcataatttgtattggtgtgagttttgagtccgaatttacaaca 13137780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 28220097 - 28220025
Alignment:
Q  5 tggttactacttttctttactccacacatcattattt--attggtgtgagatttgagtcccaattcacaacaa 75  Q
    ||||||||| ||||||||  ||||||||||||  |||  ||||||||||| ||||||||| ||||||||||||    
T  28220097 tggttactaattttctttgttccacacatcatagtttgtattggtgtgagttttgagtccgaattcacaacaa 28220025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 31659536 - 31659607
Alignment:
Q  5 tggttactacttttctttactccacacatc--attatttattggtgtgagatttgagtcccaattcacaacaa 75  Q
    |||||||||||||||||| |||||||||||  ||| | |||||||||||  ||||||||| ||||||||||||    
T  31659536 tggttactacttttcttttctccacacatcatattttatattggtgtga-ttttgagtccgaattcacaacaa 31659607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 37559735 - 37559663
Alignment:
Q  5 tggttactacttttctttactccacacatcattatttat--tggtgtgagatttgagtcccaattcacaacaa 75  Q
    ||||||||||||| |||| ||||| |||||||  |||||  ||||||||| ||||||||| ||||||||||||    
T  37559735 tggttactactttcctttgctccagacatcatagtttatattggtgtgagttttgagtccgaattcacaacaa 37559663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 30476317 - 30476247
Alignment:
Q  5 tggttactacttttctttactccacacatcat--tatttattggtgtgagatttgagtcccaattcacaac 73  Q
    ||||||||||||| ||||||||||||||| ||  | | |||||||||||| ||||||| | ||||||||||    
T  30476317 tggttactactttcctttactccacacattatagtttgtattggtgtgagttttgagttcgaattcacaac 30476247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 75
Target Start/End: Complemental strand, 23555138 - 23555070
Alignment:
Q  8 ttactacttttctttactccacacatcattatt--tattggtgtgagatttgagtcccaattcacaacaa 75  Q
    ||||||||||||||| |||||||||||||| ||  |||||||| ||  ||||||||| ||||||||||||    
T  23555138 ttactacttttctttgctccacacatcattgtttctattggtgcga-ttttgagtccgaattcacaacaa 23555070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 927853 - 927785
Alignment:
Q  5 tggttactacttttctttactccacacatcattatttattggtgtgagatttgagtcccaattcacaaca 74  Q
    ||||||| ||||  ||||||||||||||||||  ||||||| |||||  ||||||||| |||||||||||    
T  927853 tggttaccacttccctttactccacacatcatagtttattgatgtga-ttttgagtccgaattcacaaca 927785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 4552519 - 4552447
Alignment:
Q  5 tggttactacttttctttactccacacatcattattt--attggtgtgagatttgagtcccaattcacaacaa 75  Q
    ||||||||||||| ||||||| ||| ||||||  |||  |||||||||| |||||||||| ||||| ||||||    
T  4552519 tggttactactttcctttacttcacgcatcatagtttgtattggtgtgaaatttgagtccgaattcgcaacaa 4552447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 8550654 - 8550583
Alignment:
Q  5 tggttactacttttctttactccacacatcat--tatttattggtgtgagatttgagtcccaattcacaacaa 75  Q
    ||||||||||||| |||| |||||||||||||  | | |||||||||||  ||||||||| ||||||||||||    
T  8550654 tggttactactttcctttgctccacacatcatagtttgtattggtgtga-ttttgagtccgaattcacaacaa 8550583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 28223292 - 28223220
Alignment:
Q  5 tggttactacttttctttactccacacatcattattt--attggtgtgagatttgagtcccaattcacaacaa 75  Q
    |||||||||||||  ||| |||||||||||||  |||  |||||| |||| ||||||||| ||||||||||||    
T  28223292 tggttactactttcgtttgctccacacatcatagtttgtattggtctgagttttgagtccgaattcacaacaa 28223220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 196780 - 196710
Alignment:
Q  5 tggttactacttttctttactccacacatcattatt--tattggtgtgagatttgagtcccaattcacaaca 74  Q
    ||||||||| ||| |||| ||||||||||||| |||  ||||||||||| |||||||| | |||||||||||    
T  196780 tggttactattttcctttgctccacacatcataatttgtattggtgtga-atttgagtacgaattcacaaca 196710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 834040 - 833970
Alignment:
Q  5 tggttactacttttctttactccacacatcat--tatttattggtgtgagatttgagtcccaattcacaaca 74  Q
    ||||||||||||| |||| |||||||||||||  | | |||||||||||  ||||||||| |||||||||||    
T  834040 tggttactactttcctttgctccacacatcatagtttgtattggtgtga-ttttgagtccgaattcacaaca 833970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 36; Significance: 0.00000000002; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 11690787 - 11690857
Alignment:
Q  7 gttactacttttctttactccacacatcattattt--attggtgtgagatttgagtcccaattcacaacaa 75  Q
    ||||||||||| |||| |||||||||||||  |||  ||||||||||| ||||||||| ||||||||||||    
T  11690787 gttactactttcctttgctccacacatcatagtttgtattggtgtgagttttgagtccgaattcacaacaa 11690857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 39285132 - 39285202
Alignment:
Q  5 tggttactacttttctttactccacacatcattatt-tattggtgtgagatttgagtcccaattcacaaca 74  Q
    |||||||||||||||||| |||||||||||||  || ||||||| |||| ||| ||||| |||||||||||    
T  39285132 tggttactacttttctttgctccacacatcatagttgtattggtatgagttttaagtccgaattcacaaca 39285202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 74
Target Start/End: Original strand, 29868169 - 29868237
Alignment:
Q  8 ttactacttttctttactccacacatcat--tatttattggtgtgagatttgagtcccaattcacaaca 74  Q
    ||||||||||||||| |||||||||||||  | | ||||| ||||| |||||||||| |||||||||||    
T  29868169 ttactacttttctttgctccacacatcatagtttgtattgctgtgaaatttgagtccgaattcacaaca 29868237  T

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Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 75
Target Start/End: Original strand, 2838242 - 2838314
Alignment:
Q  4 gtggttactacttttctttactccacacatcattat-ttattggtgtgagatttgagtcccaattcacaacaa 75  Q
    |||||||||||||| |||||||||||||||||   | ||||||||||||| |||| |||| || |||||||||    
T  2838242 gtggttactactttcctttactccacacatcaaagtattattggtgtgagttttgtgtccgaactcacaacaa 2838314  T

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Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 36987945 - 36987873
Alignment:
Q  5 tggttactacttttctttactccacacatcat--tatttattggtgtgagatttgagtcccaattcacaacaac 76  Q
    ||||||||||||| |||| |||||||||||||  | | |||||||||||  ||||||||| |||||||||||||    
T  36987945 tggttactactttcctttgctccacacatcatagtttgtattggtgtga-ttttgagtccgaattcacaacaac 36987873  T

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Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 723617 - 723546
Alignment:
Q  5 tggttactacttttctttactccacacatcat--tatttattggtgtgagatttgagtcccaattcacaacaa 75  Q
    ||||||||||||| |||| |||||||||||||  | | |||||||||||  ||||||||| ||||||||||||    
T  723617 tggttactactttcctttgctccacacatcatagtttgtattggtgtga-ttttgagtccgaattcacaacaa 723546  T

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Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 34139643 - 34139572
Alignment:
Q  5 tggttactacttttctttactccacacatcat--tatttattggtgtgagatttgagtcccaattcacaacaa 75  Q
    ||||||||||||| |||| |||||||||||||  | | |||||||||||  ||||||||| ||||||||||||    
T  34139643 tggttactactttcctttgctccacacatcatagtttgtattggtgtga-ttttgagtccgaattcacaacaa 34139572  T

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Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 36317884 - 36317812
Alignment:
Q  5 tggttactacttttctttactccacacatcattattt--attggtgtgagatttgagtcccaattcacaacaa 75  Q
    |||||||||||||  |||  || |||||||||| |||  ||||||||||| ||||||||| ||||||||||||    
T  36317884 tggttactactttcatttgttctacacatcattgtttgtattggtgtgagttttgagtccaaattcacaacaa 36317812  T

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Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 6594874 - 6594804
Alignment:
Q  5 tggttactacttttctttactccacacatcat--tatttattggtgtgagatttgagtcccaattcacaaca 74  Q
    ||||||||||||| |||| |||||||||||||  | | |||||||||||  ||||||||| |||||||||||    
T  6594874 tggttactactttactttgctccacacatcatagtttgtattggtgtga-ttttgagtccaaattcacaaca 6594804  T

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Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 42362643 - 42362713
Alignment:
Q  5 tggttactacttttctttactccacacatcat--tatttattggtgtgagatttgagtcccaattcacaaca 74  Q
    ||||||||||||| |||| |||||||||||||  | | |||||||||||  ||||||||| |||||||||||    
T  42362643 tggttactactttcctttgctccacacatcatagtttgtattggtgtga-ttttgagtccgaattcacaaca 42362713  T

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Target: scaffold0219 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 75
Target Start/End: Complemental strand, 27285 - 27249
Alignment:
Q  39 tttattggtgtgagatttgagtcccaattcacaacaa 75  Q
    ||||||| |||||||||||||||| ||||||||||||    
T  27285 tttattgatgtgagatttgagtccgaattcacaacaa 27249  T

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