View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21116_low_5 (Length: 250)

Name: NF21116_low_5
Description: NF21116
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21116_low_5
NF21116_low_5
[»] chr8 (34 HSPs)
chr8 (6-158)||(3051124-3051276)
chr8 (13-138)||(9054785-9054910)
chr8 (13-154)||(6813691-6813833)
chr8 (16-152)||(23799527-23799664)
chr8 (16-118)||(6127265-6127368)
chr8 (13-104)||(7493121-7493212)
chr8 (16-152)||(5702433-5702570)
chr8 (16-152)||(26403180-26403317)
chr8 (16-89)||(30291620-30291695)
chr8 (17-155)||(28307568-28307707)
chr8 (7-146)||(19752335-19752475)
chr8 (17-152)||(7412351-7412486)
chr8 (13-120)||(5990509-5990615)
chr8 (63-146)||(19175753-19175835)
chr8 (17-126)||(4456064-4456173)
chr8 (16-89)||(1292543-1292617)
chr8 (16-89)||(3303750-3303824)
chr8 (63-146)||(31071228-31071310)
chr8 (63-126)||(1261953-1262015)
chr8 (13-87)||(8863574-8863646)
chr8 (16-83)||(6598986-6599054)
chr8 (16-83)||(6674439-6674507)
chr8 (78-126)||(26287937-26287985)
chr8 (78-126)||(26301194-26301242)
chr8 (78-126)||(26313188-26313236)
chr8 (63-126)||(18853166-18853229)
chr8 (63-126)||(18870560-18870623)
chr8 (63-126)||(36979413-36979475)
chr8 (36-83)||(3772225-3772274)
chr8 (16-79)||(40328793-40328857)
chr8 (63-120)||(4760074-4760130)
chr8 (95-152)||(9765849-9765906)
chr8 (16-89)||(41364927-41365001)
chr8 (13-73)||(42093128-42093188)
[»] chr3 (54 HSPs)
chr3 (12-126)||(21353598-21353712)
chr3 (13-132)||(4386865-4386984)
chr3 (17-152)||(8370428-8370563)
chr3 (16-146)||(48438230-48438361)
chr3 (16-152)||(18552823-18552960)
chr3 (16-146)||(25795797-25795928)
chr3 (16-152)||(1736245-1736382)
chr3 (17-152)||(21711233-21711368)
chr3 (16-152)||(3715942-3716079)
chr3 (15-107)||(8126685-8126778)
chr3 (16-152)||(36029103-36029240)
chr3 (16-152)||(40592722-40592859)
chr3 (7-122)||(3328288-3328403)
chr3 (16-146)||(40844668-40844798)
chr3 (7-152)||(1417422-1417567)
chr3 (19-152)||(30709733-30709867)
chr3 (5-146)||(37466307-37466448)
chr3 (67-155)||(25929435-25929522)
chr3 (16-89)||(32891117-32891192)
chr3 (7-107)||(3323622-3323722)
chr3 (63-152)||(27974941-27975029)
chr3 (58-146)||(16264366-16264453)
chr3 (16-126)||(26299024-26299135)
chr3 (16-120)||(47923845-47923951)
chr3 (15-89)||(32744516-32744590)
chr3 (16-120)||(24695104-24695209)
chr3 (67-108)||(25929365-25929406)
chr3 (14-102)||(5366263-5366351)
chr3 (17-108)||(35925534-35925625)
chr3 (63-146)||(32143337-32143419)
chr3 (78-152)||(27986449-27986523)
chr3 (13-118)||(29100203-29100309)
chr3 (63-120)||(6794702-6794758)
chr3 (14-79)||(9666556-9666623)
chr3 (16-89)||(22835082-22835156)
chr3 (16-89)||(23391989-23392063)
chr3 (78-146)||(33386669-33386737)
chr3 (16-89)||(39153441-39153515)
chr3 (63-126)||(26928590-26928652)
chr3 (63-146)||(27452974-27453056)
chr3 (16-89)||(760861-760935)
chr3 (13-73)||(25517071-25517131)
chr3 (16-89)||(29196466-29196541)
chr3 (16-89)||(29682373-29682447)
chr3 (63-126)||(2671585-2671647)
chr3 (63-126)||(7167280-7167342)
chr3 (63-126)||(8477398-8477460)
chr3 (63-126)||(8739062-8739124)
chr3 (63-126)||(9091300-9091362)
chr3 (17-89)||(9581297-9581370)
chr3 (63-126)||(40372794-40372856)
chr3 (63-120)||(1305990-1306046)
chr3 (16-89)||(23410409-23410483)
chr3 (78-146)||(39039995-39040063)
[»] chr2 (45 HSPs)
chr2 (7-152)||(2837972-2838117)
chr2 (13-152)||(2869640-2869780)
chr2 (7-152)||(1345483-1345628)
chr2 (16-152)||(20522230-20522367)
chr2 (16-120)||(21629985-21630090)
chr2 (22-143)||(27149251-27149372)
chr2 (16-120)||(31056086-31056191)
chr2 (16-152)||(34682284-34682421)
chr2 (21-152)||(13569338-13569470)
chr2 (16-146)||(10445394-10445525)
chr2 (19-152)||(10707205-10707339)
chr2 (13-155)||(15903838-15903979)
chr2 (58-152)||(34388868-34388962)
chr2 (16-152)||(14698958-14699094)
chr2 (16-152)||(17865213-17865350)
chr2 (16-120)||(40014967-40015072)
chr2 (16-152)||(8040070-8040209)
chr2 (16-146)||(33118152-33118283)
chr2 (16-120)||(8390100-8390205)
chr2 (13-132)||(28770722-28770841)
chr2 (16-146)||(39482947-39483078)
chr2 (16-118)||(33528576-33528674)
chr2 (17-152)||(28259129-28259264)
chr2 (13-118)||(18674349-18674454)
chr2 (13-126)||(35397548-35397659)
chr2 (16-89)||(11151671-11151745)
chr2 (17-120)||(23078422-23078525)
chr2 (58-152)||(16940202-16940296)
chr2 (58-152)||(17010867-17010961)
chr2 (16-89)||(11690515-11690589)
chr2 (16-89)||(42362366-42362440)
chr2 (63-126)||(3491786-3491848)
chr2 (63-126)||(25398531-25398593)
chr2 (63-126)||(25403669-25403731)
chr2 (63-126)||(25407658-25407720)
chr2 (14-89)||(723824-723900)
chr2 (16-77)||(14202497-14202559)
chr2 (16-89)||(14633906-14633980)
chr2 (16-146)||(42039619-42039750)
chr2 (63-126)||(11098926-11098988)
chr2 (63-126)||(14291524-14291586)
chr2 (63-120)||(9296400-9296456)
chr2 (16-82)||(24885675-24885742)
chr2 (13-121)||(27139843-27139951)
chr2 (16-89)||(34139851-34139925)
[»] chr7 (31 HSPs)
chr7 (13-152)||(28617173-28617312)
chr7 (13-146)||(5817218-5817350)
chr7 (15-155)||(3047261-3047402)
chr7 (15-152)||(29159813-29159951)
chr7 (15-152)||(33332399-33332537)
chr7 (16-152)||(2647646-2647783)
chr7 (16-152)||(46516260-46516397)
chr7 (7-152)||(2580400-2580545)
chr7 (16-152)||(55958-56094)
chr7 (13-152)||(23402961-23403100)
chr7 (7-152)||(20284099-20284244)
chr7 (7-152)||(9189949-9190095)
chr7 (16-126)||(35960852-35960963)
chr7 (18-118)||(49091705-49091806)
chr7 (16-152)||(21983294-21983432)
chr7 (78-152)||(9185178-9185252)
chr7 (16-154)||(4796617-4796756)
chr7 (16-80)||(24525985-24526051)
chr7 (63-125)||(44848683-44848744)
chr7 (63-120)||(18413681-18413737)
chr7 (7-78)||(9235524-9235596)
chr7 (16-89)||(38671302-38671376)
chr7 (14-89)||(41649091-41649166)
chr7 (63-126)||(1533443-1533505)
chr7 (63-126)||(2058001-2058063)
chr7 (19-117)||(2479381-2479479)
chr7 (63-126)||(18408799-18408861)
chr7 (63-126)||(21639844-21639906)
chr7 (63-152)||(21988918-21989006)
chr7 (16-89)||(3259009-3259083)
chr7 (16-85)||(25615867-25615937)
[»] chr6 (24 HSPs)
chr6 (7-146)||(14521690-14521828)
chr6 (15-138)||(31076891-31077014)
chr6 (16-152)||(10077115-10077252)
chr6 (16-152)||(5572191-5572328)
chr6 (16-126)||(21801294-21801405)
chr6 (15-152)||(31979523-31979661)
chr6 (16-120)||(31086423-31086528)
chr6 (16-145)||(18232862-18232992)
chr6 (15-155)||(24435920-24436061)
chr6 (17-152)||(5757430-5757565)
chr6 (16-118)||(4629998-4630101)
chr6 (15-145)||(27165700-27165831)
chr6 (63-152)||(21356046-21356134)
chr6 (15-120)||(22963741-22963846)
chr6 (15-120)||(23824547-23824652)
chr6 (13-120)||(1115052-1115159)
chr6 (16-73)||(16569047-16569106)
chr6 (15-74)||(99244-99303)
chr6 (13-102)||(30518076-30518165)
chr6 (78-126)||(22709054-22709102)
chr6 (78-146)||(31936603-31936671)
chr6 (63-126)||(5674769-5674831)
chr6 (16-83)||(28137494-28137562)
chr6 (14-79)||(22424917-22424983)
[»] chr1 (37 HSPs)
chr1 (15-154)||(17345469-17345607)
chr1 (16-152)||(19072938-19073075)
chr1 (16-152)||(19120828-19120965)
chr1 (13-155)||(22819435-22819578)
chr1 (13-109)||(9023787-9023883)
chr1 (16-152)||(47703886-47704023)
chr1 (16-146)||(16124466-16124597)
chr1 (58-146)||(27104365-27104453)
chr1 (16-152)||(13598408-13598545)
chr1 (16-152)||(29651821-29651958)
chr1 (16-152)||(47098775-47098911)
chr1 (16-152)||(9476271-9476408)
chr1 (17-152)||(3281718-3281853)
chr1 (17-152)||(26644849-26644984)
chr1 (13-84)||(35109485-35109556)
chr1 (7-146)||(32889455-32889595)
chr1 (77-152)||(775682-775757)
chr1 (13-123)||(918428-918538)
chr1 (13-123)||(11032268-11032378)
chr1 (21-126)||(21536525-21536630)
chr1 (16-89)||(8550867-8550941)
chr1 (16-89)||(45644434-45644509)
chr1 (13-132)||(32736944-32737063)
chr1 (14-89)||(40122278-40122354)
chr1 (60-152)||(47102837-47102928)
chr1 (63-126)||(24202768-24202830)
chr1 (17-95)||(40816765-40816844)
chr1 (25-108)||(48382441-48382524)
chr1 (13-87)||(10997031-10997105)
chr1 (63-120)||(13604622-13604678)
chr1 (63-120)||(19358842-19358898)
chr1 (63-120)||(19361431-19361487)
chr1 (63-120)||(19380071-19380127)
chr1 (36-102)||(8281378-8281444)
chr1 (16-89)||(196988-197062)
chr1 (16-89)||(834247-834321)
chr1 (36-89)||(46064951-46065006)
[»] chr5 (27 HSPs)
chr5 (16-155)||(11181782-11181923)
chr5 (13-146)||(33030888-33031021)
chr5 (16-152)||(10281761-10281898)
chr5 (13-127)||(6741887-6742001)
chr5 (7-152)||(42127352-42127497)
chr5 (23-120)||(7160861-7160958)
chr5 (16-118)||(3880343-3880446)
chr5 (7-146)||(28832275-28832412)
chr5 (17-118)||(12084127-12084228)
chr5 (13-146)||(2630247-2630380)
chr5 (63-152)||(9353331-9353419)
chr5 (16-152)||(11916922-11917059)
chr5 (16-120)||(19588788-19588893)
chr5 (63-152)||(36932349-36932437)
chr5 (17-152)||(17003911-17004047)
chr5 (63-152)||(15464542-15464630)
chr5 (17-152)||(14520240-14520375)
chr5 (14-89)||(33831692-33831768)
chr5 (63-126)||(38192209-38192271)
chr5 (63-126)||(38219434-38219496)
chr5 (58-120)||(24553501-24553561)
chr5 (63-152)||(31300595-31300683)
chr5 (16-89)||(5887496-5887570)
chr5 (16-84)||(8566031-8566100)
chr5 (63-126)||(24135884-24135946)
chr5 (76-119)||(28537669-28537712)
chr5 (13-49)||(3651613-3651649)
[»] chr4 (32 HSPs)
chr4 (16-155)||(39774255-39774395)
chr4 (24-155)||(1983259-1983390)
chr4 (16-137)||(18377384-18377506)
chr4 (16-152)||(10047389-10047526)
chr4 (16-152)||(16623243-16623380)
chr4 (13-119)||(37781905-37782011)
chr4 (17-152)||(36315181-36315316)
chr4 (17-152)||(36329390-36329525)
chr4 (15-155)||(5112244-5112384)
chr4 (17-152)||(5396623-5396758)
chr4 (16-120)||(3796469-3796574)
chr4 (16-152)||(38152389-38152526)
chr4 (58-126)||(16630673-16630741)
chr4 (16-119)||(42599523-42599626)
chr4 (64-127)||(34495822-34495885)
chr4 (58-152)||(3777559-3777652)
chr4 (62-152)||(39246004-39246094)
chr4 (16-120)||(6743366-6743470)
chr4 (16-146)||(24333825-24333957)
chr4 (13-73)||(34670613-34670673)
chr4 (63-152)||(31985633-31985720)
chr4 (16-152)||(54867194-54867330)
chr4 (78-126)||(28468542-28468590)
chr4 (16-84)||(45687267-45687337)
chr4 (14-89)||(5871832-5871908)
chr4 (16-152)||(5147687-5147824)
chr4 (14-118)||(873467-873571)
chr4 (78-146)||(5269204-5269272)
chr4 (63-126)||(24741976-24742038)
chr4 (63-126)||(29760677-29760739)
chr4 (13-109)||(18912311-18912407)
chr4 (59-127)||(39593764-39593831)
[»] scaffold0148 (1 HSPs)
scaffold0148 (59-152)||(10739-10832)
[»] scaffold0006 (3 HSPs)
scaffold0006 (16-152)||(5693-5830)
scaffold0006 (16-152)||(2502-2639)
scaffold0006 (63-120)||(133279-133335)
[»] scaffold0036 (1 HSPs)
scaffold0036 (16-152)||(85693-85829)
[»] scaffold0140 (1 HSPs)
scaffold0140 (63-152)||(8418-8506)
[»] scaffold0087 (2 HSPs)
scaffold0087 (17-152)||(43913-44048)
scaffold0087 (17-152)||(36784-36919)
[»] scaffold0176 (1 HSPs)
scaffold0176 (16-118)||(17307-17410)
[»] scaffold0016 (1 HSPs)
scaffold0016 (13-124)||(102442-102553)
[»] scaffold0188 (2 HSPs)
scaffold0188 (63-126)||(17951-18013)
scaffold0188 (63-126)||(24044-24106)
[»] scaffold0076 (1 HSPs)
scaffold0076 (14-152)||(15937-16075)
[»] scaffold0184 (1 HSPs)
scaffold0184 (78-138)||(29506-29566)
[»] scaffold0078 (1 HSPs)
scaffold0078 (78-138)||(43278-43338)
[»] scaffold0236 (1 HSPs)
scaffold0236 (27-73)||(10515-10561)
[»] scaffold0098 (1 HSPs)
scaffold0098 (86-126)||(45289-45329)


Alignment Details
Target: chr8 (Bit Score: 149; Significance: 8e-79; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 6 - 158
Target Start/End: Complemental strand, 3051276 - 3051124
Alignment:
Q  6 agtgagatgaaaaatgggtagaaattaagttttgttctttgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattgg 105  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3051276 agtgacatgaaaaatgggtagaaattaagttttgttctttgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattgg 3051177  T
Q  106 agaggtgctctctcctccagaggaggttatattagaccgaattgggttactaa 158  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3051176 agaggtgctctctcctccagaggaggttatattagaccgaattgggttactaa 3051124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 13 - 138
Target Start/End: Original strand, 9054785 - 9054910
Alignment:
Q  13 tgaaaaatgggtagaaattaagttttgttctttgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtg 112  Q
    ||||||||||||||||||||  |||||||||||||| ||| ||| ||||||||||||||||   ||||||||||||||||||||||||||| ||||| ||    
T  9054785 tgaaaaatgggtagaaattagattttgttctttgtgcgcttttaagctaatttcttgtaaccactttgtatcactttcatcttagtggattagagagctg 9054884  T
Q  113 ctctctcctccagaggaggttatatt 138  Q
    ||||||||||||||| |||| |||||    
T  9054885 ctctctcctccagagtaggtcatatt 9054910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 13 - 154
Target Start/End: Complemental strand, 6813833 - 6813691
Alignment:
Q  13 tgaaaaatgggtagaaa-ttaagttttgttctttgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggt 111  Q
    ||||||||||||||||| ||| |||||||||||||||||||   | |||||||||||||||| | ||||| |||||||||||||| |||||||||||| |    
T  6813833 tgaaaaatgggtagaaaattaggttttgttctttgtgagcttgcaagctaatttcttgtaacccctttgtgtcactttcatcttattggattggagagct 6813734  T
Q  112 gctctctcctccagaggaggttatattagaccgaattgggtta 154  Q
    ||||||||| | || | |||||||||| ||||||| |||||||    
T  6813733 gctctctcccctagtgtaggttatattggaccgaactgggtta 6813691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 16 - 152
Target Start/End: Original strand, 23799527 - 23799664
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctt-tgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgct 114  Q
    ||||||||||||||||| || |||||||| ||| ||||  || |||||||||||||||||| |||||| |||||||||| ||||||||||||| | ||||    
T  23799527 aaaatgggtagaaattaggtcttgttcttgtgtaagcttgtaagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgct 23799626  T
Q  115 ctctcctccagaggaggttatattagaccgaattgggt 152  Q
    |||||||||| |  |||| ||||| ||||||| |||||    
T  23799627 ctctcctccaaattaggtcatattggaccgaactgggt 23799664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 118
Target Start/End: Complemental strand, 6127368 - 6127265
Alignment:
Q  16 aaaatgggtagaaattaagttttgttcttt-gtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgct 114  Q
    ||||||||||||||||| || ||||||||| || ||||  || |||||||||||||||||| |||||| |||||||||| ||||||||||||||| ||||    
T  6127368 aaaatgggtagaaattaggtcttgttcttttgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgct 6127269  T
Q  115 ctct 118  Q
    ||||    
T  6127268 ctct 6127265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 104
Target Start/End: Original strand, 7493121 - 7493212
Alignment:
Q  13 tgaaaaatgggtagaaattaagttttgttctttgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattg 104  Q
    |||||||  ||||||||||| |||||||||| |||||||| ||||| ||||||||| |||||  ||||||||||||||||||||||||||||    
T  7493121 tgaaaaacaggtagaaattaggttttgttctgtgtgagcttttatgttaatttcttataacttctttgtatcactttcatcttagtggattg 7493212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 152
Target Start/End: Original strand, 5702433 - 5702570
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctt-tgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgct 114  Q
    ||||||||||||||||| |||||| |||| ||| ||||  || |||||||||||||||||| |||||| |||||||||| ||| ||||||||| | ||||    
T  5702433 aaaatgggtagaaattaggttttgctcttgtgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcataggggattggagggatgct 5702532  T
Q  115 ctctcctccagaggaggttatattagaccgaattgggt 152  Q
    |||||| ||| |  |||| ||||| ||||||| |||||    
T  5702533 ctctcccccatattaggtcatattggaccgaactgggt 5702570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 152
Target Start/End: Original strand, 26403180 - 26403317
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctt-tgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgct 114  Q
    ||||||||||||||||| || |||||||| ||  ||||  || ||||||||| | |||||| |||||| |||||||||| ||||||||||||||| ||||    
T  26403180 aaaatgggtagaaattaggtcttgttcttgtgcaagcttgtaagctaatttcctataactcttttgtaacactttcatcatagtggattggagagctgct 26403279  T
Q  115 ctctcctccagaggaggttatattagaccgaattgggt 152  Q
    |||||| |||||  |||| ||||| ||||||| |||||    
T  26403280 ctctcccccagattaggtcatattggaccgaactgggt 26403317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 30291620 - 30291695
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctttgtgagct--cttatgctaatttcttgtaactcatttgtatcacttt 89  Q
    ||||||||||||||||| |||||||||||||||||||   | | ||||||||||||||||||||||||||||||||    
T  30291620 aaaatgggtagaaattaggttttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatcacttt 30291695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 155
Target Start/End: Complemental strand, 28307707 - 28307568
Alignment:
Q  17 aaatgggtagaaattaagttttgttctttgtgagctcttatg-ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctc 115  Q
    ||||| ||||||| || || ||||||||| |||||| |||   ||||||||||||||| ||| ||||| |||| |||||||||||||||||||| |||||    
T  28307707 aaatgtgtagaaagtaggtcttgttctttatgagcttttaaaactaatttcttgtaacccatgtgtattacttccatcttagtggattggagagctgctc 28307608  T
Q  116 tctcctccagaggaggttatattagaccgaattgggttac 155  Q
    ||  | |||||| |||| || || ||||||| ||||||||    
T  28307607 tcatccccagagtaggtcattttggaccgaactgggttac 28307568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 146
Target Start/End: Original strand, 19752335 - 19752475
Alignment:
Q  7 gtgagatgaaaaatgggtagaaattaagttttgttctt-tgtgagctcttatgctaattt-cttgtaactcatttgtatcactttcatcttagtggattg 104  Q
    |||| ||||||||||||||||||||| |  |||||||| ||| ||||   | |||| ||| ||||||||||||| ||| |||||||||||||||||||||    
T  19752335 gtgatatgaaaaatgggtagaaattaggacttgttcttgtgtaagcttgcaagctatttttcttgtaactcatt-gtaacactttcatcttagtggattg 19752433  T
Q  105 gagaggtgctctctcctccagaggaggttatattagaccgaa 146  Q
    ||||| |||||||||| | |||  |||| ||||| |||||||    
T  19752434 gagagctgctctctcccctagactaggtcatattggaccgaa 19752475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 17 - 152
Target Start/End: Complemental strand, 7412486 - 7412351
Alignment:
Q  17 aaatgggtagaaattaagttttgttctt-tgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctc 115  Q
    |||||||||||||||| || |||||||| ||| ||||   | | || ||||||||||||| |||||| |||||||||| ||||||||||||||| |||||    
T  7412486 aaatgggtagaaattaggtcttgttcttgtgtaagcttgcaagttattttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctc 7412388  T
Q  116 tctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||| ||| |  |||| ||||| ||||||| |||||    
T  7412387 tctcccccatattaggtcatattggaccgaactgggt 7412351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 5990509 - 5990615
Alignment:
Q  13 tgaaaaatgggtagaaattaagttttgttctttgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtg 112  Q
    ||||||||||||  |||| | ||  ||||||||||||||| ||| ||||||||||||||||   ||||||||||||||||||||||  |||||||||  |    
T  5990509 tgaaaaatgggtgaaaatgaggtcgtgttctttgtgagcttttaagctaatttcttgtaacatctttgtatcactttcatcttagt-aattggagagccg 5990607  T
Q  113 ctctctcc 120  Q
    ||||||||    
T  5990608 ctctctcc 5990615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 63 - 146
Target Start/End: Original strand, 19175753 - 19175835
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaa 146  Q
    ||||||||||||| |||||| |||||||||| ||||||||||||||| |||||||||| |||||  |||| ||||| |||||||    
T  19175753 tttcttgtaactc-tttgtaacactttcatcatagtggattggagagttgctctctcccccagattaggtcatattggaccgaa 19175835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 126
Target Start/End: Complemental strand, 4456173 - 4456064
Alignment:
Q  17 aaatgggtagaaattaagttttgttctt-tgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctc 115  Q
    |||||||||||||||| || |||||||| ||| ||||     |||| ||||||||||||| |||||| |||||||||| ||||||||||||||| |||||    
T  4456173 aaatgggtagaaattatgtcttgttcttgtgtaagcttgccagctattttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctc 4456075  T
Q  116 tctcctccaga 126  Q
    ||||| |||||    
T  4456074 tctcccccaga 4456064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 1292617 - 1292543
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctttgtgagct--cttatgctaatttcttgtaactcatttgtatcacttt 89  Q
    ||||||||||||||||||| |||||||||||||||||   | | ||||||||||||||||||||||||||| ||||    
T  1292617 aaaatgggtagaaattaag-tttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctcttt 1292543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 3303824 - 3303750
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctttgtgagctc--ttatgctaatttcttgtaactcatttgtatcacttt 89  Q
    |||||||||||||||||||||| ||||||||||||||   |||  |||||||||||||||||||||||||| ||||    
T  3303824 aaaatgggtagaaattaagttt-gttctttgtgagcttgtttaacctaatttcttgtaactcatttgtatctcttt 3303750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 63 - 146
Target Start/End: Original strand, 31071228 - 31071310
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaa 146  Q
    ||||||||||| | |||||| |||||||||| ||||||||||||||| |||||||||| |||||  |||| ||||| |||||||    
T  31071228 tttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaa 31071310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 126
Target Start/End: Original strand, 1261953 - 1262015
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    ||||||||||| | |||||| |||||||||| ||||||||||||||| |||||||||| |||||    
T  1261953 tttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctcccccaga 1262015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 8863574 - 8863646
Alignment:
Q  13 tgaaaaatgggtagaaattaagttttgttctttgtgagctcttatgctaatttcttgtaactcatttgtatcact 87  Q
    |||||||||||||||||||||| |||||||  |||||||| ||| | ||||||||||||||   |||||||||||    
T  8863574 tgaaaaatgggtagaaattaaggtttgttc--tgtgagcttttaagttaatttcttgtaacctctttgtatcact 8863646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 6598986 - 6599054
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctttgtgagct--cttatgctaatttcttgtaactcatttgtat 83  Q
    ||||||||||||||||||| ||||||||||| |||||   ||| |||||||||||||||| |||||||||    
T  6598986 aaaatgggtagaaattaag-tttgttctttgcgagcttgtttaagctaatttcttgtaacccatttgtat 6599054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 6674439 - 6674507
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctttgtgagct--cttatgctaatttcttgtaactcatttgtat 83  Q
    ||||||||||||||||||| ||||||||||| |||||   ||| |||||||||||||||| |||||||||    
T  6674439 aaaatgggtagaaattaag-tttgttctttgcgagcttgtttaagctaatttcttgtaacccatttgtat 6674507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 26287985 - 26287937
Alignment:
Q  78 ttgtatcactttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    ||||| |||||||||| ||||||||||||||| |||||||||| |||||    
T  26287985 ttgtaacactttcatcatagtggattggagagctgctctctcccccaga 26287937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 26301242 - 26301194
Alignment:
Q  78 ttgtatcactttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    ||||| |||||||||| ||||||||||||||| |||||||||| |||||    
T  26301242 ttgtaacactttcatcatagtggattggagagctgctctctcccccaga 26301194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 26313236 - 26313188
Alignment:
Q  78 ttgtatcactttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    ||||| |||||||||| ||||||||||||||| |||||||||| |||||    
T  26313236 ttgtaacactttcatcatagtggattggagagctgctctctcccccaga 26313188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 126
Target Start/End: Original strand, 18853166 - 18853229
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    ||||||||||| | |||||| |||||||||  || |||||||||||| |||||||||| |||||    
T  18853166 tttcttgtaacccttttgtaacactttcattatattggattggagagctgctctctcccccaga 18853229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 126
Target Start/End: Original strand, 18870560 - 18870623
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    ||||||||||| | |||||| |||||||||  || |||||||||||| |||||||||| |||||    
T  18870560 tttcttgtaacccttttgtaacactttcattatattggattggagagctgctctctcccccaga 18870623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 126
Target Start/End: Complemental strand, 36979475 - 36979413
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    ||||||||||| | |||||| |||||||||| || |||||||||||| |||||||||| |||||    
T  36979475 tttcttgtaaccc-tttgtaacactttcatcatattggattggagagctgctctctcccccaga 36979413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 83
Target Start/End: Original strand, 3772225 - 3772274
Alignment:
Q  36 tttgttctttgtgagctc--ttatgctaatttcttgtaactcatttgtat 83  Q
    |||||||||||||||||   ||| ||||||||||||||||||||||||||    
T  3772225 tttgttctttgtgagcttatttaagctaatttcttgtaactcatttgtat 3772274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 40328793 - 40328857
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctttgtgagctc--ttatgctaatttcttgtaactcattt 79  Q
    ||||||||||||||||| |||| ||||||||||||||   |||  |||||||||||||||||||||    
T  40328793 aaaatgggtagaaattaggttt-gttctttgtgagcttgtttaaactaatttcttgtaactcattt 40328857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 63 - 120
Target Start/End: Original strand, 4760074 - 4760130
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcc 120  Q
    ||||||||||| | |||||| |||||||||| || |||||||||||| ||||||||||    
T  4760074 tttcttgtaaccc-tttgtaacactttcatcatattggattggagagctgctctctcc 4760130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 152
Target Start/End: Original strand, 9765849 - 9765906
Alignment:
Q  95 tagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||||||||||||| |||||||||| |||||  |||| ||||| ||||||| |||||    
T  9765849 tagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggt 9765906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 41365001 - 41364927
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctttgtgagctc--ttatgctaatttcttgtaactcatttgtatcacttt 89  Q
    ||||| ||||||||||| |||| |||||||||||| |   ||| |||||||||||||||| |||||||||| ||||    
T  41365001 aaaattggtagaaattaggttt-gttctttgtgagtttgtttaagctaatttcttgtaacacatttgtatcccttt 41364927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 42093128 - 42093188
Alignment:
Q  13 tgaaaaatgggtagaaattaagttttgttctttgtgagctcttatgctaatttcttgtaac 73  Q
    |||||||| ||||||||||| | | ||||||||||||| |  || ||||||||||||||||    
T  42093128 tgaaaaataggtagaaattatgatatgttctttgtgagtttgtaagctaatttcttgtaac 42093188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 99; Significance: 6e-49; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 21353712 - 21353598
Alignment:
Q  12 atgaaaaatgggtagaaattaagttttgttctttgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggt 111  Q
    ||||||||||||||||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21353712 atgaaaaatgggtagaaattaggttgtgttctttgtgagctcttgtgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggt 21353613  T
Q  112 gctctctcctccaga 126  Q
    |||||||||| ||||    
T  21353612 gctctctccttcaga 21353598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 13 - 132
Target Start/End: Original strand, 4386865 - 4386984
Alignment:
Q  13 tgaaaaatgggtagaaattaagttttgttctttgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtg 112  Q
    ||||||||| |||||||||| ||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||| |||||| |||||||||||| ||    
T  4386865 tgaaaaatgagtagaaattaggttttgttctttgtgagcttttaagctaatttcttgtaacccatttgtatcacttttatcttattggattggagagctg 4386964  T
Q  113 ctctctcctccagaggaggt 132  Q
    |||||||| |||||| ||||    
T  4386965 ctctctcccccagagtaggt 4386984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 17 - 152
Target Start/End: Original strand, 8370428 - 8370563
Alignment:
Q  17 aaatgggtagaaattaagttttgttctt-tgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctc 115  Q
    |||||||||||||||| || |||||||| ||| |||| ||| |||||||||||||||||| |||||| |||||||||| ||||||||||||||| |||||    
T  8370428 aaatgggtagaaattatgtcttgttcttgtgtaagcttttaagctaatttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctc 8370526  T
Q  116 tctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||| |||||  |||| ||||| ||||||| |||||    
T  8370527 tctcccccagattaggtcatattggaccgaactgggt 8370563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 16 - 146
Target Start/End: Complemental strand, 48438361 - 48438230
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctt-tgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgct 114  Q
    ||||||||||||||||| || |||||||| ||| ||||  ||||||||||||||||||||| |||||| |||||||||| ||||||||||||| | ||||    
T  48438361 aaaatgggtagaaattaggtcttgttcttgtgtaagcttatatgctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgct 48438262  T
Q  115 ctctcctccagaggaggttatattagaccgaa 146  Q
    |||||| |||||  |||| ||||| |||||||    
T  48438261 ctctcccccagattaggtcatattggaccgaa 48438230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 16 - 152
Target Start/End: Original strand, 18552823 - 18552960
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctt-tgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgct 114  Q
    ||||||||||||||||| || |||||||| ||| ||||  || |||||||||||||||||| |||||| |||||||||| ||||||||||||| | ||||    
T  18552823 aaaatgggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgct 18552922  T
Q  115 ctctcctccagaggaggttatattagaccgaattgggt 152  Q
    |||||| |||||  |||| ||||| ||||||| |||||    
T  18552923 ctctcccccagattaggtcatattggaccgaactgggt 18552960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 146
Target Start/End: Complemental strand, 25795928 - 25795797
Alignment:
Q  16 aaaatgggtagaaattaagttttgttcttt-gtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgct 114  Q
    ||||||||||||||||| || ||||||||| || ||||  || |||||||||||||||||| || ||| ||||||||||||||| |||||||||| ||||    
T  25795928 aaaatgggtagaaattaggtcttgttcttttgtaagcttataagctaatttcttgtaactctttcgtaacactttcatcttagtagattggagagctgct 25795829  T
Q  115 ctctcctccagaggaggttatattagaccgaa 146  Q
    |||||| |||||  |||| ||||| |||||||    
T  25795828 ctctcccccagattaggtcatattggaccgaa 25795797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 152
Target Start/End: Original strand, 1736245 - 1736382
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctt-tgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgct 114  Q
    ||||||||||||||||| || |||||||| ||| ||||  || | |||||||||||||||| |||||| |||||||||| ||||||||||||| | ||||    
T  1736245 aaaatgggtagaaattaggtcttgttcttgtgtaagcttataagttaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgct 1736344  T
Q  115 ctctcctccagaggaggttatattagaccgaattgggt 152  Q
    |||||| |||||  |||| ||||| ||||||| |||||    
T  1736345 ctctcccccagattaggtcatattggaccgaactgggt 1736382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 17 - 152
Target Start/End: Complemental strand, 21711368 - 21711233
Alignment:
Q  17 aaatgggtagaaattaagttttgttctt-tgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctc 115  Q
    |||||||||||||||| || ||| |||| ||| |||| ||| |||||||||||||||||| |||||| |||||||||| ||||||||| ||||| |||||    
T  21711368 aaatgggtagaaattaggtcttgctcttgtgtaagcttttaagctaatttcttgtaactc-tttgtaacactttcatcatagtggatttgagagctgctc 21711270  T
Q  116 tctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||| |||||  |||| ||||| ||||||| |||||    
T  21711269 tctcccccagattaggtcatattggaccgaactgggt 21711233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 152
Target Start/End: Original strand, 3715942 - 3716079
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctt-tgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgct 114  Q
    |||||||||||||||||||| |||||||| ||| || |  || |||||||||||||||||| |||||| |||||||||| |||| |||||||||| ||||    
T  3715942 aaaatgggtagaaattaagtcttgttcttgtgtaagtttgtaagctaatttcttgtaactcttttgtaacactttcatcatagtagattggagagctgct 3716041  T
Q  115 ctctcctccagaggaggttatattagaccgaattgggt 152  Q
    |||||  | |||  |||| ||||| ||||||| |||||    
T  3716042 ctctctcctagattaggtcatattggaccgaactgggt 3716079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 15 - 107
Target Start/End: Complemental strand, 8126778 - 8126685
Alignment:
Q  15 aaaaatgggtagaaattaagttttgttcttt-gtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggag 107  Q
    ||||||||||||||||||||| ||||||||| || ||||  || |||||||||||||||||| |||||| |||||||||| |||||||||||||    
T  8126778 aaaaatgggtagaaattaagtattgttcttttgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcgtagtggattggag 8126685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 152
Target Start/End: Complemental strand, 36029240 - 36029103
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctt-tgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgct 114  Q
    ||||||||||||||||| || |||||||| ||| || |  || |||||||||||||||||| |||||| |||||||||| ||||||||||||||| ||||    
T  36029240 aaaatgggtagaaattaggtcttgttcttgtgtaagtttgtaagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgct 36029141  T
Q  115 ctctcctccagaggaggttatattagaccgaattgggt 152  Q
     ||||| |||||  |||| ||||| ||| ||| |||||    
T  36029140 ttctcccccagattaggtcatattggacagaactgggt 36029103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 152
Target Start/End: Original strand, 40592722 - 40592859
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctt-tgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgct 114  Q
    |||||||||||||||||  |||||||||| ||| ||||  || |||||||||||||||||| |||||| |||||||||| |||| |||||||||| | ||    
T  40592722 aaaatgggtagaaattagattttgttcttgtgtaagcttgtaagctaatttcttgtaactcttttgtaacactttcatcatagtcgattggagagcttct 40592821  T
Q  115 ctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||||  ||||  |||| ||||| ||||||| |||||    
T  40592822 ctctcccacagattaggtcatattggaccgaactgggt 40592859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 122
Target Start/End: Original strand, 3328288 - 3328403
Alignment:
Q  7 gtgagatgaaaaatgggtagaaattaagttttgttcttt-gtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattgg 105  Q
    |||| ||||||||||||||||||||| |  ||||||||| || ||||  || ||||||||||||||||||||| ||| |||||||||||||||||||||     
T  3328288 gtgatatgaaaaatgggtagaaattaggacttgttcttttgtaagcttataagctaatttcttgtaactcatt-gtaacactttcatcttagtggattga 3328386  T
Q  106 agaggtgctctctcctc 122  Q
    || | ||||||||||||    
T  3328387 agggctgctctctcctc 3328403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 146
Target Start/End: Complemental strand, 40844798 - 40844668
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctt-tgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgct 114  Q
    ||||||||||||||||| || |||||||| ||| ||||  || |||||||||||||||||| |||||| |||||||||| ||||||||| ||| | ||||    
T  40844798 aaaatgggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggatttgagggctgct 40844699  T
Q  115 ctctcctccagaggaggttatattagaccgaa 146  Q
    |||||| |||||  |||| ||||| |||||||    
T  40844698 ctctcc-ccagattaggtcatattggaccgaa 40844668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 7 - 152
Target Start/End: Original strand, 1417422 - 1417567
Alignment:
Q  7 gtgagatgaaaaatgggtagaaattaagttttgttcttt-gtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattgg 105  Q
    |||| ||||||||||||||||||||| |  ||||||||| || || |  || ||||||||||| ||||||||| ||| ||||||| ||||||||||||||    
T  1417422 gtgatatgaaaaatgggtagaaattaggacttgttcttttgtaagtttataagctaatttcttataactcatt-gtaacactttcttcttagtggattgg 1417520  T
Q  106 agaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    || | |||||||||| |||||  |||| ||||| ||||||| |||||    
T  1417521 agggatgctctctcccccagattaggtcatattggaccgaactgggt 1417567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 19 - 152
Target Start/End: Original strand, 30709733 - 30709867
Alignment:
Q  19 atgggtagaaattaagttttgttctt-tgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctc 117  Q
    |||||||||||||| || ||| |||| ||| ||||  || |||||||||||||||||| |||||| || ||||||| ||||||||||||| | |||||||    
T  30709733 atgggtagaaattaggtcttgctcttgtgtaagcttataagctaatttcttgtaactcttttgtaacaatttcatcatagtggattggagggctgctctc 30709832  T
Q  118 tcctccagaggaggttatattagaccgaattgggt 152  Q
    ||| |||||  |||| ||||| ||||||| |||||    
T  30709833 tcccccagattaggtcatattggaccgaactgggt 30709867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 146
Target Start/End: Complemental strand, 37466448 - 37466307
Alignment:
Q  5 gagtgagatgaaaaatgggtagaaattaagttttgttcttt-gtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggatt 103  Q
    |||||| ||||||||||||||||||||| |  ||||||||| || ||||  ||   ||||||||||||||||||| ||| ||||||||||||||||||||    
T  37466448 gagtgatatgaaaaatgggtagaaattaggacttgttcttttgtaagcttataaattaatttcttgtaactcatt-gtaacactttcatcttagtggatt 37466350  T
Q  104 ggagaggtgctctctcctccagaggaggttatattagaccgaa 146  Q
    |||| | | |||||||| |||||  |||| ||||| |||||||    
T  37466349 ggagggctactctctcccccagattaggtcatattggaccgaa 37466307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 67 - 155
Target Start/End: Original strand, 25929435 - 25929522
Alignment:
Q  67 ttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggttac 155  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||||| || |||||| ||||  |||| ||||||| ||||||||    
T  25929435 ttgtaactcatttgtatcactttcatcttagtggattggagggctgctctc-cccccagagtaggtcgtattggaccgaactgggttac 25929522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 32891117 - 32891192
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctttgtgagct--cttatgctaatttcttgtaactcatttgtatcacttt 89  Q
    |||||||||||||||||||||||||||||||||||||   | | ||||||||||||||||||||||||||| ||||    
T  32891117 aaaatgggtagaaattaagttttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctcttt 32891192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 107
Target Start/End: Original strand, 3323622 - 3323722
Alignment:
Q  7 gtgagatgaaaaatgggtagaaattaagttttgttcttt-gtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattgg 105  Q
    |||| ||||| ||||||||||||||| |  ||||||||| || ||||  || ||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  3323622 gtgatatgaacaatgggtagaaattatgacttgttcttttgtaagcttataagctaatttcttgtaactcatt-gtaacactttcatcttagtggattgg 3323720  T
Q  106 ag 107  Q
    ||    
T  3323721 ag 3323722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 27974941 - 27975029
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||||||||||| |||||| |||||||||| ||||||||||||||| |||||||||| |||||  |||| ||||| ||||||| |||||    
T  27974941 tttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggt 27975029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 58 - 146
Target Start/End: Complemental strand, 16264453 - 16264366
Alignment:
Q  58 gctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaa 146  Q
    |||| ||||||||||||| |||||| |||||||||| ||||||||||||||| |||||||||| |||||  |||| ||||| |||||||    
T  16264453 gctattttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaa 16264366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 26299135 - 26299024
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctt-tgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgct 114  Q
    ||||||||||||||||| || |||||||| | | || |  || |||||||||||||||||| |||||| |||||||||| |||| |||||||| | ||||    
T  26299135 aaaatgggtagaaattaggtcttgttcttgtctaagtttataagctaatttcttgtaactcttttgtaacactttcatcatagtagattggagggctgct 26299036  T
Q  115 ctctcctccaga 126  Q
    |||||| |||||    
T  26299035 ctctcccccaga 26299024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 120
Target Start/End: Original strand, 47923845 - 47923951
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctttgtg--agctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgc 113  Q
    |||||||||| |||||| |||||| ||||||||  | || ||| |||||||||||||||||| |||||| |||||||||| |||| ||||| || | |||    
T  47923845 aaaatgggtataaattaggttttgctctttgtgtaaacttttaagctaatttcttgtaactcttttgtagcactttcatcatagtagattgaagggctgc 47923944  T
Q  114 tctctcc 120  Q
    |||||||    
T  47923945 tctctcc 47923951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 32744590 - 32744516
Alignment:
Q  15 aaaaatgggtagaaattaagttttgttctttgtgagctc--ttatgctaatttcttgtaactcatttgtatcacttt 89  Q
    ||||||||||||||||||   |||||||||||||||||   ||| ||||||||||||||||||||||||||||||||    
T  32744590 aaaaatgggtagaaattag--tttgttctttgtgagcttgtttaagctaatttcttgtaactcatttgtatcacttt 32744516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 120
Target Start/End: Original strand, 24695104 - 24695209
Alignment:
Q  16 aaaatgggtagaaattaagttttgttcttt-gtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgct 114  Q
    ||||||||||||||||| || ||||||||| || || |  || |||||||||||||||||| |||||| |||||||||| ||| ||||| ||| | ||||    
T  24695104 aaaatgggtagaaattaggtcttgttcttttgtaagtttataagctaatttcttgtaactcttttgtaacactttcatcatagcggattagagggttgct 24695203  T
Q  115 ctctcc 120  Q
    ||||||    
T  24695204 ctctcc 24695209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 67 - 108
Target Start/End: Original strand, 25929365 - 25929406
Alignment:
Q  67 ttgtaactcatttgtatcactttcatcttagtggattggaga 108  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  25929365 ttgtaactcatttgtatcactttcatcttagtggattggaga 25929406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 102
Target Start/End: Original strand, 5366263 - 5366351
Alignment:
Q  14 gaaaaatgggtagaaattaagttttgttctttgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggat 102  Q
    |||||| |||||||||||||| ||| ||| ||||||| | ||| | ||||||||||||||   ||||||||||||||||| ||||||||    
T  5366263 gaaaaaagggtagaaattaagattttttcattgtgagattttaagataatttcttgtaacctctttgtatcactttcatcatagtggat 5366351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 108
Target Start/End: Complemental strand, 35925625 - 35925534
Alignment:
Q  17 aaatgggtagaaattaagttttgttctt-tgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggaga 108  Q
    |||||||||||||||| ||||||||||  ||| ||||  ||  ||||||||||||||||| |||||| |||||||||| ||||||||||||||    
T  35925625 aaatgggtagaaattaggttttgttctagtgtaagcttataaactaatttcttgtaactc-tttgtaacactttcatcatagtggattggaga 35925534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 63 - 146
Target Start/End: Complemental strand, 32143419 - 32143337
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaa 146  Q
    ||||||||||| | |||||| |||||||||| ||||||||||||||| |||||||||| |||||  |||| ||||| |||||||    
T  32143419 tttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaa 32143337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 78 - 152
Target Start/End: Original strand, 27986449 - 27986523
Alignment:
Q  78 ttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||| |||||||||| ||||||||||||||| |||||||||| |||||  |||| ||||| ||||||| |||||    
T  27986449 ttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggt 27986523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 118
Target Start/End: Complemental strand, 29100309 - 29100203
Alignment:
Q  13 tgaaaaatgggtagaaattaagttttgttctttgtgagctcttatgctaatttcttgtaactcatttgtatcact-ttcatcttagtggattggagaggt 111  Q
    ||||||| | |||||||||| | ||||||||||||||| | ||| ||||||||||| ||||   ||||||||||| || ||| ||||||| ||||||| |    
T  29100309 tgaaaaacgagtagaaattagggtttgttctttgtgagtttttaagctaatttcttataacctctttgtatcactctttatcatagtggaatggagagct 29100210  T
Q  112 gctctct 118  Q
    |||||||    
T  29100209 gctctct 29100203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 120
Target Start/End: Original strand, 6794702 - 6794758
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcc 120  Q
    ||||||||||||| |||||| |||||||||| ||||||||||||||| ||||||||||    
T  6794702 tttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctctctcc 6794758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 79
Target Start/End: Complemental strand, 9666623 - 9666556
Alignment:
Q  14 gaaaaatgggtagaaattaagttttgttctttgtgagct--cttatgctaatttcttgtaactcattt 79  Q
    |||||||||||||||||||  ||||||||||||||||||   | | ||||||||||||||||||||||    
T  9666623 gaaaaatgggtagaaattagattttgttctttgtgagcttgttgaagctaatttcttgtaactcattt 9666556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 22835156 - 22835082
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctttgtgagctc--ttatgctaatttcttgtaactcatttgtatcacttt 89  Q
    ||||||||||||||||| |||| ||||||||||||||   ||| |||||||||||||||| |||||||||| ||||    
T  22835156 aaaatgggtagaaattaggttt-gttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatcccttt 22835082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 23392063 - 23391989
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctttgtgagctc--ttatgctaatttcttgtaactcatttgtatcacttt 89  Q
    |||||| ||||||||||||||| ||||||||||||||   ||| | |||||||||||||| |||||||||||||||    
T  23392063 aaaatgagtagaaattaagttt-gttctttgtgagcttgtttaagataatttcttgtaacccatttgtatcacttt 23391989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 33386669 - 33386737
Alignment:
Q  78 ttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaa 146  Q
    ||||| |||||||||| ||||||||||||||| |||||||||| |||||  |||| ||||| |||||||    
T  33386669 ttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaa 33386737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 39153515 - 39153441
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctttgtgagctc--ttatgctaatttcttgtaactcatttgtatcacttt 89  Q
    ||||||||||||||||| |||| |||| |||||||||   ||| ||||||||||||||||||||||||||| ||||    
T  39153515 aaaatgggtagaaattaggttt-gttcattgtgagcttgtttaagctaatttcttgtaactcatttgtatcccttt 39153441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 126
Target Start/End: Original strand, 26928590 - 26928652
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    ||||||||||| | |||||| |||||||||| ||||||||||||||| |||||||||| |||||    
T  26928590 tttcttgtaaccc-tttgtaacactttcatcatagtggattggagagttgctctctcccccaga 26928652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 146
Target Start/End: Complemental strand, 27453056 - 27452974
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaa 146  Q
    ||||||||||| | |||||| |||||||||| ||||||||||||||| |||||||||| || ||  |||| ||||| |||||||    
T  27453056 tttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctcccccggattaggtcatattggaccgaa 27452974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 760861 - 760935
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctttgtgagctc--ttatgctaatttcttgtaactcatttgtatcacttt 89  Q
    ||||||||||||||||| || | ||||||||||||||   ||| |||||||||||||||| |||||||||| ||||    
T  760861 aaaatgggtagaaattaggtct-gttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatcccttt 760935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 25517131 - 25517071
Alignment:
Q  13 tgaaaaatgggtagaaattaagttttgttctttgtgagctcttatgctaatttcttgtaac 73  Q
    ||||||||  |||||||||| | ||||||||||||||||| ||| ||||||||||| ||||    
T  25517131 tgaaaaataagtagaaattagggtttgttctttgtgagcttttaagctaatttcttataac 25517071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 29196541 - 29196466
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctttgtgagctctt--atgctaatttcttgtaactcatttgtatcacttt 89  Q
    ||||||||||||||||| | |||||||||||||||||  |  | |||||||||||| ||| |||||||||| ||||    
T  29196541 aaaatgggtagaaattagggtttgttctttgtgagcttgtcaaagctaatttcttggaacccatttgtatctcttt 29196466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 29682373 - 29682447
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctttgtgagctc--ttatgctaatttcttgtaactcatttgtatcacttt 89  Q
    ||||||||||||||||| |||| ||||||||||||||   ||| ||||||||||||| || |||||||||| ||||    
T  29682373 aaaatgggtagaaattatgttt-gttctttgtgagcttgtttaagctaatttcttgtcacccatttgtatcccttt 29682447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 126
Target Start/End: Original strand, 2671585 - 2671647
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    ||||||||||| | |||||| |||||||||| || |||||||||||| |||||||||| |||||    
T  2671585 tttcttgtaaccc-tttgtaacactttcatcatattggattggagagctgctctctcccccaga 2671647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 126
Target Start/End: Complemental strand, 7167342 - 7167280
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    ||||||||||| | |||||| |||||||||| || |||||||||||| |||||||||| |||||    
T  7167342 tttcttgtaaccc-tttgtaacactttcatcatattggattggagagctgctctctcccccaga 7167280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 126
Target Start/End: Complemental strand, 8477460 - 8477398
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    ||||||||||| | |||||| |||||||||| || |||||||||||| |||||||||| |||||    
T  8477460 tttcttgtaaccc-tttgtaacactttcatcatattggattggagagctgctctctcccccaga 8477398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 126
Target Start/End: Original strand, 8739062 - 8739124
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    ||||||||||| | |||||| |||||||||| || |||||||||||| |||||||||| |||||    
T  8739062 tttcttgtaaccc-tttgtaacactttcatcatattggattggagagctgctctctcccccaga 8739124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 126
Target Start/End: Original strand, 9091300 - 9091362
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    ||||||||||| | |||||| |||||||||| || |||||||||||| |||||||||| |||||    
T  9091300 tttcttgtaaccc-tttgtaacactttcatcatattggattggagagctgctctctcccccaga 9091362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 9581297 - 9581370
Alignment:
Q  17 aaatgggtagaaattaagttttgttctttgtgagctc--ttatgctaatttcttgtaactcatttgtatcacttt 89  Q
    |||||||||||||||| |||| ||||||||||||||   ||| ||||||||||| |||| |||||||||| ||||    
T  9581297 aaatgggtagaaattaggttt-gttctttgtgagcttgtttaagctaatttcttttaacccatttgtatcccttt 9581370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 126
Target Start/End: Original strand, 40372794 - 40372856
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    ||||||||||| | |||||| |||||||||| || |||||||||||| |||||||||| |||||    
T  40372794 tttcttgtaaccc-tttgtaacactttcatcatattggattggagagctgctctctcccccaga 40372856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 63 - 120
Target Start/End: Complemental strand, 1306046 - 1305990
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcc 120  Q
    ||||||||||| | |||||| |||||||||| ||||||||||||||| |||| |||||    
T  1306046 tttcttgtaaccc-tttgtaacactttcatcgtagtggattggagagctgctatctcc 1305990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 23410483 - 23410409
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctttgtgagctc--ttatgctaatttcttgtaactcatttgtatcacttt 89  Q
    ||||||||||||||||| ||||  |||||||||||||   ||| ||||||||| | |||| |||||||||||||||    
T  23410483 aaaatgggtagaaattatgttta-ttctttgtgagcttgtttaagctaatttcgtataacccatttgtatcacttt 23410409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 39039995 - 39040063
Alignment:
Q  78 ttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaa 146  Q
    ||||| |||||||||| ||||||||||||||| || ||||| | |||||  |||| ||||| |||||||    
T  39039995 ttgtaacactttcatcatagtggattggagagttgttctcttccccagattaggtcatattggaccgaa 39040063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 90; Significance: 1e-43; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 7 - 152
Target Start/End: Original strand, 2837972 - 2838117
Alignment:
Q  7 gtgagatgaaaaatgggtagaaattaagttttgttctttgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattgga 106  Q
    |||| |||||||||||| | |||||| ||| |||||||||||||||||| | |||||||||||||||||||||||||||||||||| |||||||||||||    
T  2837972 gtgacatgaaaaatgggcaaaaattaggttgtgttctttgtgagctcttgtactaatttcttgtaactcatttgtatcactttcattttagtggattgga 2838071  T
Q  107 gaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    || ||||||||||| |||||| |||| ||||| ||||||| |||||    
T  2838072 gatgtgctctctcccccagagtaggtcatattggaccgaactgggt 2838117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 13 - 152
Target Start/End: Original strand, 2869640 - 2869780
Alignment:
Q  13 tgaaaaatgggtagaaattaagtttt-gttctttgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggt 111  Q
    |||||||||||||||||||| ||||| |||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| |    
T  2869640 tgaaaaatgggtagaaattaggtttttgttctttgtgagcttttaagctaatttcttgtaactcctttgtatcactttcatcttagtggattggagagct 2869739  T
Q  112 gctctctcctccagaggaggttatattagaccgaattgggt 152  Q
     |||||||| | |||| |||| ||||| ||||||| |||||    
T  2869740 actctctcccctagagtaggtcatattggaccgaactgggt 2869780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 7 - 152
Target Start/End: Original strand, 1345483 - 1345628
Alignment:
Q  7 gtgagatgaaaaatgggtagaaattaagttttgttctttgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatctt-agtggattgg 105  Q
    |||| ||||||||||||||||||||| ||| |||| ||||||||||| | ||||||||||||| ||||||||||||||||||||||||| ||||||| ||    
T  1345483 gtgacatgaaaaatgggtagaaattaggttgtgtt-tttgtgagctcatgtgctaatttcttgcaactcatttgtatcactttcatcttaagtggatcgg 1345581  T
Q  106 agaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||||||||||||| |||||| |||| ||||| ||||||| |||||    
T  1345582 agaggtgctctctcccccagagtaggtcatattggaccgaactgggt 1345628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 152
Target Start/End: Complemental strand, 20522367 - 20522230
Alignment:
Q  16 aaaatgggtagaaattaagttttgttcttt-gtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgct 114  Q
    |||||||||||||||||||| ||||||||| || ||||  ||  ||||||||||||||| | |||||| |||||||||| ||||||||||||| | ||||    
T  20522367 aaaatgggtagaaattaagtcttgttcttttgtaagcttataatctaatttcttgtaacccttttgtaacactttcatcatagtggattggagggttgct 20522268  T
Q  115 ctctcctccagaggaggttatattagaccgaattgggt 152  Q
    |||||| |||||  |||| ||||| ||||||| |||||    
T  20522267 ctctcccccagattaggtcatattggaccgaactgggt 20522230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 120
Target Start/End: Complemental strand, 21630090 - 21629985
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctt-tgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgct 114  Q
    |||||||||||||||||||| |||||||| ||| ||||  ||  ||||||||||||||||| |||||| |||||||||| ||||||||||||||| ||||    
T  21630090 aaaatgggtagaaattaagtcttgttcttgtgtaagcttataaactaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgct 21629991  T
Q  115 ctctcc 120  Q
    ||||||    
T  21629990 ctctcc 21629985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 143
Target Start/End: Original strand, 27149251 - 27149372
Alignment:
Q  22 ggtagaaattaagttttgttctttgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcct 121  Q
    ||||||| |||||| |||||||||||||||| ||| | ||||||||||| || | ||||||||||||||||  ||||||||||||||| ||||||||||     
T  27149251 ggtagaagttaagtcttgttctttgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgctctctccc 27149350  T
Q  122 ccagaggaggttatattagacc 143  Q
    ||| || |||| ||||| ||||    
T  27149351 ccatagtaggtcatattggacc 27149372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 120
Target Start/End: Complemental strand, 31056191 - 31056086
Alignment:
Q  16 aaaatgggtagaaattaagttttgttcttt-gtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgct 114  Q
    ||||||||||||||||| || ||||||||| || ||||  || |||||||| ||||||||| |||||| |||||||||||||||||||||||||| ||||    
T  31056191 aaaatgggtagaaattaggtcttgttcttttgtaagcttataagctaatttattgtaactcttttgtaacactttcatcttagtggattggagagctgct 31056092  T
Q  115 ctctcc 120  Q
    ||||||    
T  31056091 ctctcc 31056086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 152
Target Start/End: Original strand, 34682284 - 34682421
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctt-tgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgct 114  Q
    |||||||||||||||||||| |||||||| ||| |||   || |||||||||||||||||| |||||| |||||||||  ||||||||||||||| ||||    
T  34682284 aaaatgggtagaaattaagtcttgttcttgtgtaagcctgtaagctaatttcttgtaactcttttgtaacactttcattatagtggattggagagctgct 34682383  T
Q  115 ctctcctccagaggaggttatattagaccgaattgggt 152  Q
    |||||| |||||  | || ||||| ||||||| |||||    
T  34682384 ctctcccccagattatgtcatattggaccgaactgggt 34682421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 21 - 152
Target Start/End: Complemental strand, 13569470 - 13569338
Alignment:
Q  21 gggtagaaattaagttttgttctt-tgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctc 119  Q
    |||||||||||| || |||||||| ||| | ||  || |||||||||||||||||| |||||| |||||||||| ||||||||||||||| |||||||||    
T  13569470 gggtagaaattaggtcttgttcttgtgtaaacttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctctc 13569371  T
Q  120 ctccagaggaggttatattagaccgaattgggt 152  Q
    | |||||  |||| ||||| ||||||| |||||    
T  13569370 ccccagattaggtcatattggaccgaactgggt 13569338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 146
Target Start/End: Original strand, 10445394 - 10445525
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctt-tgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgct 114  Q
    ||||||||||||||||| || |||||||| ||| || |  || |||||||||||||||||| |||||| |||||||||  ||||||||||||||| ||||    
T  10445394 aaaatgggtagaaattaggtcttgttcttgtgtaagattgtaagctaatttcttgtaactcttttgtaacactttcataatagtggattggagagctgct 10445493  T
Q  115 ctctcctccagaggaggttatattagaccgaa 146  Q
    |||||| |||||  |||| ||||| |||||||    
T  10445494 ctctcccccagattaggtcatattggaccgaa 10445525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 152
Target Start/End: Original strand, 10707205 - 10707339
Alignment:
Q  19 atgggtagaaattaagttttgttctt-tgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctc 117  Q
    |||||||||||||| || |||||||| ||| ||||  || |||||||||||||||||| |||||| |||||||||| ||||||||||||||| || ||||    
T  10707205 atgggtagaaattaggtcttgttcttgtgtaagcttgtaagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagttgttctc 10707304  T
Q  118 tcctccagaggaggttatattagaccgaattgggt 152  Q
    ||| ||| |  |||| ||||| ||||||| |||||    
T  10707305 tcccccatattaggtcatattggaccgaactgggt 10707339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 155
Target Start/End: Original strand, 15903838 - 15903979
Alignment:
Q  13 tgaaaaatgggtagaaattaagttttgttctttgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtg 112  Q
    ||||||||||||||||||||   |||||||||||||||||  || |||| ||||||||||| | ||||||||||||| ||||||||||||||||||  |     
T  15903838 tgaaaaatgggtagaaattagaatttgttctttgtgagcttgtaagcta-tttcttgtaacccctttgtatcacttttatcttagtggattggagatttt 15903936  T
Q  113 ctctctcctccagaggaggttatattagaccgaattgggttac 155  Q
    ||||||||  ||||| |||| ||||| || |||| | ||||||    
T  15903937 ctctctccgtcagagtaggtcatattggatcgaactaggttac 15903979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 58 - 152
Target Start/End: Complemental strand, 34388962 - 34388868
Alignment:
Q  58 gctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    |||||||||||||||||| |||||| |||||||||| ||||||||||||||| | |||||||| |||||  |||| ||||| |||||||||||||    
T  34388962 gctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctactctctcccccagattaggtcatattggaccgaattgggt 34388868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 152
Target Start/End: Original strand, 14698958 - 14699094
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctt-tgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgct 114  Q
    ||||||||||||||||| || |||||||| ||| ||||  || |||||||||||||||||| |||||| | |||||||| ||||||||||||| | ||||    
T  14698958 aaaatgggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaactcttttgtaac-ctttcatcatagtggattggagggctgct 14699056  T
Q  115 ctctcctccagaggaggttatattagaccgaattgggt 152  Q
    |||||| |||||  |||| ||||| ||||||| |||||    
T  14699057 ctctcccccagattaggtcatattggaccgaactgggt 14699094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 152
Target Start/End: Complemental strand, 17865350 - 17865213
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctt-tgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgct 114  Q
    ||||| ||||||||||| || |||||||| ||| ||||  || |||||||||||||||||| |||||| |||||||||| ||||||||||||| | ||||    
T  17865350 aaaataggtagaaattatgtcttgttcttgtgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggttgct 17865251  T
Q  115 ctctcctccagaggaggttatattagaccgaattgggt 152  Q
    |||||| |||||  |||| ||||| ||| ||| |||||    
T  17865250 ctctcccccagattaggtcatattcgactgaactgggt 17865213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 120
Target Start/End: Complemental strand, 40015072 - 40014967
Alignment:
Q  16 aaaatgggtagaaattaagttttgttcttt-gtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgct 114  Q
    |||||| |||||||||| || ||||||||| ||||| | ||| |||||||||| | ||||||||||||||||||||||||||||||||||||| | || |    
T  40015072 aaaatgagtagaaattaggtcttgttcttttgtgagtttttaagctaatttctcgcaactcatttgtatcactttcatcttagtggattggagggatgtt 40014973  T
Q  115 ctctcc 120  Q
    ||||||    
T  40014972 ctctcc 40014967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 152
Target Start/End: Complemental strand, 8040209 - 8040070
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctt-tgtgagctcttatgctaatttcttgtaactca--tttgtatcactttcatcttagtggattggagaggtg 112  Q
    ||||||||||||||||| || |||||||| ||| ||||  || ||||||||||||||||||   |||||| |||||||||| ||||||||||||||| ||    
T  8040209 aaaatgggtagaaattaggtcttgttcttgtgtaagcttgtaagctaatttcttgtaactctcttttgtaacactttcatcatagtggattggagagctg 8040110  T
Q  113 ctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    |||||||| |||||  |||| ||||| ||| ||| |||||    
T  8040109 ctctctcccccagattaggtcatattggactgaactgggt 8040070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 146
Target Start/End: Complemental strand, 33118283 - 33118152
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctt-tgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgct 114  Q
    |||||||||||||||||||| |||||||| ||| ||||  || |||||||||||||||||  |||||| | |||||||| ||||||||||||| | ||||    
T  33118283 aaaatgggtagaaattaagtcttgttcttgtgtaagcttataagctaatttcttgtaactattttgtaactctttcatcatagtggattggagggctgct 33118184  T
Q  115 ctctcctccagaggaggttatattagaccgaa 146  Q
    |||||| ||| |  |||| ||||| |||||||    
T  33118183 ctctcccccaaattaggtcatattggaccgaa 33118152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 120
Target Start/End: Original strand, 8390100 - 8390205
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctt-tgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgct 114  Q
    ||||||||||||||||| || |||||||| ||  ||||  || |||||||||||||||||| ||| || |||||||||| ||||||||||||||| ||||    
T  8390100 aaaatgggtagaaattaggtcttgttcttgtgcaagcttgtaagctaatttcttgtaactcttttttaacactttcatcatagtggattggagagctgct 8390199  T
Q  115 ctctcc 120  Q
    ||||||    
T  8390200 ctctcc 8390205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 132
Target Start/End: Original strand, 28770722 - 28770841
Alignment:
Q  13 tgaaaaatgggtagaaattaagttttgttctttgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtg 112  Q
    ||||||||||||||||||||   ||||||||||||||||| ||| |||||||||||||||    ||||||||| | | ||| ||| |||| |||||| ||    
T  28770722 tgaaaaatgggtagaaattagagtttgttctttgtgagcttttaagctaatttcttgtaatatctttgtatcattcttatcgtagaggatcggagagctg 28770821  T
Q  113 ctctctcctccagaggaggt 132  Q
    |||| |||||||||| ||||    
T  28770822 ctctatcctccagagtaggt 28770841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 146
Target Start/End: Complemental strand, 39483078 - 39482947
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctt-tgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgct 114  Q
    ||||||||||||||||| || |||||||| ||| ||||  || |||||||||||||||||| |||||| || ||||||| |||||||||||||   ||||    
T  39483078 aaaatgggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaactcttttgtaacattttcatcatagtggattggaggcctgct 39482979  T
Q  115 ctctcctccagaggaggttatattagaccgaa 146  Q
    |||||| ||| |  |||| ||||| |||||||    
T  39482978 ctctcccccatattaggtcatattggaccgaa 39482947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 118
Target Start/End: Original strand, 33528576 - 33528674
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctttgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctc 115  Q
    ||||||||||||||||| || ||||||||    ||||  || |||||||||||||||||| |||||| |||||||||| ||||||||||||| | |||||    
T  33528576 aaaatgggtagaaattaggtcttgttctt----agcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggttgctc 33528671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 17 - 152
Target Start/End: Original strand, 28259129 - 28259264
Alignment:
Q  17 aaatgggtagaaattaagttttgttctt-tgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctc 115  Q
    ||||||||||||||||  | |||||||| ||| ||||   | |||| ||||||||||||| |||||| |||||||||| ||||||||||||||| |||||    
T  28259129 aaatgggtagaaattagatcttgttcttgtgtaagcttgcaagctattttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctc 28259227  T
Q  116 tctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||| ||| |  |||| ||||| ||||||| |||||    
T  28259228 tctcccccaaattaggtcatattggaccgaactgggt 28259264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 118
Target Start/End: Original strand, 18674349 - 18674454
Alignment:
Q  13 tgaaaaatgggtagaaattaagttttgttctttgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtg 112  Q
    |||||||||| ||||||||| | ||||||||||||||||| |||  ||||||||||||||| | || |||||||| |  || |||| ||| |||||| ||    
T  18674349 tgaaaaatggatagaaattatggtttgttctttgtgagcttttaaactaatttcttgtaaccccttggtatcactcttgtcatagtagatcggagagctg 18674448  T
Q  113 ctctct 118  Q
    ||||||    
T  18674449 ctctct 18674454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 126
Target Start/End: Complemental strand, 35397659 - 35397548
Alignment:
Q  13 tgaaaaatgggtagaaattaagttttgttctttgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtg 112  Q
    |||||||||| ||||||||| |||| ||||||| ||| || ||| |||||||| | |||||   ||| |||||||||||||||||||||||| |||| ||    
T  35397659 tgaaaaatggatagaaattaggttt-gttctttatgaccttttaagctaattt-tcgtaacctctttatatcactttcatcttagtggattgaagagctg 35397562  T
Q  113 ctctctcctccaga 126  Q
    || |||||||||||    
T  35397561 ctatctcctccaga 35397548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 11151745 - 11151671
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctttgtgagctc--ttatgctaatttcttgtaactcatttgtatcacttt 89  Q
    ||||||||||||||||| | |||||||||||||||||   ||| |||||||||||||||| |||||||||||||||    
T  11151745 aaaatgggtagaaatta-gatttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatcacttt 11151671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 120
Target Start/End: Original strand, 23078422 - 23078525
Alignment:
Q  17 aaatgggtagaaattaagttttgttctt-tgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctc 115  Q
    ||||||||||||||||||| |||||||| ||| ||||   | |||| ||||||||||||| ||| || |||||||||| ||||||||||||||| || ||    
T  23078422 aaatgggtagaaattaagtcttgttcttgtgtaagcttgcaagctattttcttgtaactc-tttctaacactttcatcatagtggattggagagttgttc 23078520  T
Q  116 tctcc 120  Q
    |||||    
T  23078521 tctcc 23078525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 58 - 152
Target Start/End: Original strand, 16940202 - 16940296
Alignment:
Q  58 gctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||||||||||||| || |||||| |||||||||| ||||||||||||| | || ||| ||| |||||  | || ||||| |||||||||||||    
T  16940202 gctaatttcttgtaattcttttgtaacactttcatcatagtggattggagggctgatctttcccccagattatgtcatattggaccgaattgggt 16940296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 58 - 152
Target Start/End: Original strand, 17010867 - 17010961
Alignment:
Q  58 gctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||||||||||||| || |||||| |||||||||| ||||||||||||| | || ||| ||| |||||  | || ||||| |||||||||||||    
T  17010867 gctaatttcttgtaattcttttgtaacactttcatcatagtggattggagggctgatctttcccccagattatgtcatattggaccgaattgggt 17010961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 11690515 - 11690589
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctttgtgagctc--ttatgctaatttcttgtaactcatttgtatcacttt 89  Q
    ||||||||||||||||| |||| ||||||||||||||   ||| |||||||||||||||| |||||||||| ||||    
T  11690515 aaaatgggtagaaattaggttt-gttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatcccttt 11690589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 42362366 - 42362440
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctttgtgagctc--ttatgctaatttcttgtaactcatttgtatcacttt 89  Q
    ||||||||||||||||| |||| ||||||||||||||   ||| |||||||||||||||| |||||||||| ||||    
T  42362366 aaaatgggtagaaattaggttt-gttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatcccttt 42362440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 126
Target Start/End: Complemental strand, 3491848 - 3491786
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    ||||||||||| | |||||| |||||||||| ||||||||||||||| |||||||||| |||||    
T  3491848 tttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctcccccaga 3491786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 126
Target Start/End: Complemental strand, 25398593 - 25398531
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    ||||||||||| | |||||| |||||||||| ||||||||||||||| |||||||||| |||||    
T  25398593 tttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctcccccaga 25398531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 126
Target Start/End: Complemental strand, 25403731 - 25403669
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    ||||||||||| | |||||| |||||||||| ||||||||||||||| |||||||||| |||||    
T  25403731 tttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctcccccaga 25403669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 126
Target Start/End: Complemental strand, 25407720 - 25407658
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    ||||||||||| | |||||| |||||||||| ||||||||||||||| |||||||||| |||||    
T  25407720 tttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctcccccaga 25407658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 723900 - 723824
Alignment:
Q  14 gaaaaatgggtagaaattaagttttgttctttgtgagctc--ttatgctaatttcttgtaactcatttgtatcacttt 89  Q
    ||||| ||||||||||||| |||| ||||||||||||||   ||| |||||||||||||||| |||||||||| ||||    
T  723900 gaaaactgggtagaaattaggttt-gttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatcccttt 723824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 77
Target Start/End: Complemental strand, 14202559 - 14202497
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctttgtgagctc--ttatgctaatttcttgtaactcat 77  Q
    ||||||||||||||||| |||| ||||||||||||||   ||| ||||||||||||||||||||    
T  14202559 aaaatgggtagaaattatgttt-gttctttgtgagcttgtttaagctaatttcttgtaactcat 14202497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 14633980 - 14633906
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctttgtgagctc--ttatgctaatttcttgtaactcatttgtatcacttt 89  Q
    ||||||||||||||||| | || ||||||||||||||   ||| |||||||||||||||| |||||||||| ||||    
T  14633980 aaaatgggtagaaattaggatt-gttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatcccttt 14633906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 146
Target Start/End: Original strand, 42039619 - 42039750
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctt-tgtgagctcttatgctaa-tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgc 113  Q
    ||||||||||||||||| || ||||| || ||| ||||   | ||||| ||||||||||||| || ||| |||||||||| ||||||||| ||||| |||    
T  42039619 aaaatgggtagaaattaggtcttgtttttgtgtaagcttgcaagctaattttcttgtaactc-ttcgtaacactttcatcatagtggattagagagctgc 42039717  T
Q  114 tctctcctccagaggaggttatattagaccgaa 146  Q
    |||||||  ||||  |||| ||||| |||||||    
T  42039718 tctctcccacagattaggtcatattggaccgaa 42039750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 126
Target Start/End: Original strand, 11098926 - 11098988
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    ||||||||||| | |||||| |||||||||| || |||||||||||| |||||||||| |||||    
T  11098926 tttcttgtaaccc-tttgtaacactttcatcatattggattggagagctgctctctcccccaga 11098988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 126
Target Start/End: Complemental strand, 14291586 - 14291524
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    ||||||||||| | |||||| |||||||||| || |||||||||||| |||||||||| |||||    
T  14291586 tttcttgtaaccc-tttgtaacactttcatcatattggattggagagctgctctctcccccaga 14291524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 63 - 120
Target Start/End: Original strand, 9296400 - 9296456
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcc 120  Q
    ||||||||||| | |||||| |||||||||| || |||||||||||| ||||||||||    
T  9296400 tttcttgtaaccc-tttgtaacactttcatcatattggattggagagctgctctctcc 9296456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 24885675 - 24885742
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctttgtgagctc--ttatgctaatttcttgtaactcatttgta 82  Q
    |||||| |||||||||| |||| ||||||||||||||   ||| |||||||||||||||| ||||||||    
T  24885675 aaaatgagtagaaattaggttt-gttctttgtgagcttgtttaagctaatttcttgtaacccatttgta 24885742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 121
Target Start/End: Complemental strand, 27139951 - 27139843
Alignment:
Q  13 tgaaaaatgggtagaaattaagttttgttctttgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtg 112  Q
    ||||| ||| |||||||||| | ||||| ||||||||||| | |   ||||||| ||||||   ||||||||||| |  || ||||| ||||||||| ||    
T  27139951 tgaaatatgtgtagaaattagggtttgtactttgtgagctttaaatttaatttcctgtaacatttttgtatcactattttcatagtgaattggagagctg 27139852  T
Q  113 ctctctcct 121  Q
    |||||||||    
T  27139851 ctctctcct 27139843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 34139925 - 34139851
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctttgtgagctc--ttatgctaatttcttgtaactcatttgtatcacttt 89  Q
    ||||||||||||||||| | || ||||||||||||||   ||| |||||||||||||||| ||| |||||| ||||    
T  34139925 aaaatgggtagaaattagggtt-gttctttgtgagcttgtttaagctaatttcttgtaacccatatgtatcccttt 34139851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 88; Significance: 2e-42; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 13 - 152
Target Start/End: Original strand, 28617173 - 28617312
Alignment:
Q  13 tgaaaaatgggtagaaattaagttttgttctttgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtg 112  Q
    |||||||| ||||||||||| ||||||||||||||||||| ||| |||||||||||||||| |  |||||||||||||||||||||||||||||||| ||    
T  28617173 tgaaaaataggtagaaattaggttttgttctttgtgagcttttaagctaatttcttgtaaccccattgtatcactttcatcttagtggattggagagctg 28617272  T
Q  113 ctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    |||||||| |||||| |||| ||||| ||||||| |||||    
T  28617273 ctctctcccccagagtaggtcatattggaccgaactgggt 28617312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 13 - 146
Target Start/End: Original strand, 5817218 - 5817350
Alignment:
Q  13 tgaaaaatgggtagaaattaagttttgttctttgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtg 112  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||| | |||||||||||||||| |||||||||||||||| ||    
T  5817218 tgaaaaatggatagaaattaggttttgttctttgtgagctcttatgcaaatttcttgtaacccctttgtatcactttcatattagtggattggagagctg 5817317  T
Q  113 ctctctcctccagaggaggttatattagaccgaa 146  Q
    |||||||| |||||| |||| ||||| |||||||    
T  5817318 ctctctcc-ccagagtaggtcatattggaccgaa 5817350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 15 - 155
Target Start/End: Complemental strand, 3047402 - 3047261
Alignment:
Q  15 aaaaatgggtagaaattaagttttgttctttgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgct 114  Q
    |||||||||||||||||| || |||||||||||||||| ||| | | ||||||||||||||||||||| ||||||||| ||||||||||||| |   |||    
T  3047402 aaaaatgggtagaaattaggtcttgttctttgtgagcttttaagttgatttcttgtaactcatttgtaccactttcatattagtggattggataacggct 3047303  T
Q  115 ctct-cctccagaggaggttatattagaccgaattgggttac 155  Q
    |||| || |||||| |||| ||||| ||||||| ||||||||    
T  3047302 ctctccccccagagcaggtcatattggaccgaactgggttac 3047261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 15 - 152
Target Start/End: Complemental strand, 29159951 - 29159813
Alignment:
Q  15 aaaaatgggtagaaattaagttttgttctt-tgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgc 113  Q
    |||||||||||||||||| || |||||||| ||| ||||  || |||||||||||||||||| |||||| |||||||||| ||||||||||||||| |||    
T  29159951 aaaaatgggtagaaattaggtcttgttcttgtgtaagcttgtaagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgc 29159852  T
Q  114 tctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||||| | |||  |||| ||||| ||||||| |||||    
T  29159851 tctctcccctagattaggtcatattggaccgaactgggt 29159813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 15 - 152
Target Start/End: Original strand, 33332399 - 33332537
Alignment:
Q  15 aaaaatgggtagaaattaagttttgttcttt-gtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgc 113  Q
    ||||||| |||||||||| || ||||||||| || ||||  || |||||||||||||||||| |||||| |||||||||||||||||||||||| | |||    
T  33332399 aaaaatgagtagaaattaggtcttgttcttttgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcttagtggattggagggctgc 33332498  T
Q  114 tctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||||| |||||  |||| |||||||| |||| |||||    
T  33332499 tctctcccccagattaggtcatattagatcgaactgggt 33332537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 16 - 152
Target Start/End: Original strand, 2647646 - 2647783
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctt-tgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgct 114  Q
    ||||||||||||||||| || |||||||| ||| ||||  || |||||||||||||||||| |||||| |||||||||| ||||||||||||| | ||||    
T  2647646 aaaatgggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgct 2647745  T
Q  115 ctctcctccagaggaggttatattagaccgaattgggt 152  Q
    |||||| |||||  |||| ||||| | |||||||||||    
T  2647746 ctctcccccagaataggtcatattgggccgaattgggt 2647783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 16 - 152
Target Start/End: Original strand, 46516260 - 46516397
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctt-tgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgct 114  Q
    ||||||||||||||||| || |||||||| ||| |||| ||| |||||||||||||||||| |||||| |||||||||| ||||||||||||| | ||||    
T  46516260 aaaatgggtagaaattatgtcttgttcttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgct 46516359  T
Q  115 ctctcctccagaggaggttatattagaccgaattgggt 152  Q
    |||||| | |||  |||| ||||| ||||||| |||||    
T  46516360 ctctcccctagattaggtcatattggaccgaactgggt 46516397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 7 - 152
Target Start/End: Complemental strand, 2580545 - 2580400
Alignment:
Q  7 gtgagatgaaaaatgggtagaaattaagttttgttctt-tgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattgg 105  Q
    |||| |||||||||||||||||| || |  |||||||| ||| ||||   | |||| |||||||||||||||| ||| ||||||||||||||||||||||    
T  2580545 gtgatatgaaaaatgggtagaaactaggacttgttcttgtgtaagcttgcaagctattttcttgtaactcatt-gtaacactttcatcttagtggattgg 2580447  T
Q  106 agaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    |||| |||||||||| |||||  |||| ||||| |||||||||||||    
T  2580446 agagctgctctctcccccagactaggtcatattggaccgaattgggt 2580400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 152
Target Start/End: Complemental strand, 56094 - 55958
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctt-tgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgct 114  Q
    ||||||||||||||||| || |||||||| ||| ||||  || |||||||||||||||||| |||||| |||||||||| ||||||||||||| | ||||    
T  56094 aaaatgggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgct 55995  T
Q  115 ctctcctccagaggaggttatattagaccgaattgggt 152  Q
    |||||| |||||  |||| ||||| ||||||| |||||    
T  55994 ctctcc-ccagattaggtcatattggaccgaactgggt 55958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 13 - 152
Target Start/End: Original strand, 23402961 - 23403100
Alignment:
Q  13 tgaaaaatgggtagaaattaagttttgttcttt-gtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggt 111  Q
    |||||||||||||||||||| |  ||||||||| || ||||  || ||||||||||||||||||||| ||| ||||||||||||||| |||||||| | |    
T  23402961 tgaaaaatgggtagaaattaggacttgttcttttgtaagcttataagctaatttcttgtaactcatt-gtaacactttcatcttagtagattggagggct 23403059  T
Q  112 gctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    |||| ||||  ||||  |||| |||||||||||||||||||    
T  23403060 gctcactccctcagattaggtcatattagaccgaattgggt 23403100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 7 - 152
Target Start/End: Complemental strand, 20284244 - 20284099
Alignment:
Q  7 gtgagatgaaaaatgggtagaaattaagttttgttcttt-gtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattgg 105  Q
    |||| |||||||| |||||||||||| |  ||||||||| || ||||  || |||||||||||||||| |||| ||| ||||||||||||||||||||||    
T  20284244 gtgatatgaaaaaagggtagaaattaggacttgttcttttgtaagcttataagctaatttcttgtaacgcatt-gtaacactttcatcttagtggattgg 20284146  T
Q  106 agaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    || | |||||||||| |||||  |||| ||||| ||||||| |||||    
T  20284145 agggctgctctctcccccagattaggtcatattggaccgaactgggt 20284099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 7 - 152
Target Start/End: Original strand, 9189949 - 9190095
Alignment:
Q  7 gtgagatgaaaaatgggtagaaattaagttttgttctt-tgtgagctcttatgctaattt-cttgtaactcatttgtatcactttcatcttagtggattg 104  Q
    |||| ||||||||||||||||||||| |  |||||||| ||| ||||   | |||| ||| ||||||||||||| ||| |||||||||||||||||||||    
T  9189949 gtgatatgaaaaatgggtagaaattaggacttgttcttgtgtaagcttgcaagctatttttcttgtaactcatt-gtaacactttcatcttagtggattg 9190047  T
Q  105 gagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||| |||||||||| |||||  |||| ||||| ||||||| |||||    
T  9190048 gagagctgctctctcccccagactaggtcatattggaccgaactgggt 9190095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 35960963 - 35960852
Alignment:
Q  16 aaaatgggtagaaattaagttttgttcttt-gtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgct 114  Q
    ||||||||||||||||| || ||||||||| || ||||  || ||||||||||| ||||||||||||| |||||||||| |||||| |||||| | ||||    
T  35960963 aaaatgggtagaaattaggtattgttcttttgtaagcttataagctaatttcttctaactcatttgtaacactttcatcatagtggtttggagggctgct 35960864  T
Q  115 ctctcctccaga 126  Q
    |||||| |||||    
T  35960863 ctctcccccaga 35960852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 118
Target Start/End: Complemental strand, 49091806 - 49091705
Alignment:
Q  18 aatgggtagaaattaagttttgttctt-tgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctct 116  Q
    ||||||||||||||| || |||||||| ||| ||||  || | |||||||||||||||| |||||| |||||||||| ||||||||||||||| ||||||    
T  49091806 aatgggtagaaattaggtcttgttcttgtgtaagcttataaggtaatttcttgtaactcttttgtaacactttcatcatagtggattggagagttgctct 49091707  T
Q  117 ct 118  Q
    ||    
T  49091706 ct 49091705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 152
Target Start/End: Complemental strand, 21983432 - 21983294
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctt-tgtgagctcttatgctaatttcttgtaactcattt-gtatcactttcatcttagtggattggagaggtgc 113  Q
    |||||||||||||| || || |||||||| ||| ||||   | |||| ||||||||||||| ||| ||| |||||||||| ||||||||||||||| |||    
T  21983432 aaaatgggtagaaactaggtcttgttcttgtgtaagcttgcaagctattttcttgtaactctttttgtaacactttcatcatagtggattggagagctgc 21983333  T
Q  114 tctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||||| |||||  |||| ||||| ||||||| |||||    
T  21983332 tctctcccccagattaggtcatattggaccgaactgggt 21983294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 78 - 152
Target Start/End: Original strand, 9185178 - 9185252
Alignment:
Q  78 ttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||| |||||||||||||||||||||||||| | |||||||| |||||  |||||||||| ||||||| |||||    
T  9185178 ttgtaacactttcatcttagtggattggagagcttctctctcccccagactaggttatattggaccgaactgggt 9185252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 154
Target Start/End: Original strand, 4796617 - 4796756
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctt-tgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgct 114  Q
    |||||||||| |||| | || |||||||| ||| ||||  || |||||||||||||||||| |||||| || ||||||| ||||||||| ||| | ||||    
T  4796617 aaaatgggtataaatgaggtcttgttcttgtgtaagcttataagctaatttcttgtaactcttttgtaacaatttcatcatagtggatttgagggctgct 4796716  T
Q  115 ctctcctccagaggaggttatattagaccgaattgggtta 154  Q
     ||||| |||||  |||| || || ||||||| |||||||    
T  4796717 ttctcccccagattaggtcattttggaccgaactgggtta 4796756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 24526051 - 24525985
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctttgtgagctctt--atgctaatttcttgtaactcatttg 80  Q
    ||||||||||||||||| |||||||||||||||||||  |  | |||||||||||||||||||||||    
T  24526051 aaaatgggtagaaattaggttttgttctttgtgagcttgtcaaagctaatttcttgtaactcatttg 24525985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 63 - 125
Target Start/End: Original strand, 44848683 - 44848744
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccag 125  Q
    ||||||||||||| |||||| |||||||||| ||||||||||||||| |||||||||| ||||    
T  44848683 tttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctctctcccccag 44848744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 120
Target Start/End: Complemental strand, 18413737 - 18413681
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcc 120  Q
    ||||||||||| | |||||| |||||||||| ||||||||||||||| ||||||||||    
T  18413737 tttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctcc 18413681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 78
Target Start/End: Original strand, 9235524 - 9235596
Alignment:
Q  7 gtgagatgaaaaatgggtagaaattaagttttgttc-tttgtgagctcttatgctaatttcttgtaactcatt 78  Q
    |||| ||||||||||||||||||||| |  |||||| ||||| ||||  || |||||||||||||||||||||    
T  9235524 gtgatatgaaaaatgggtagaaattaggacttgttcttttgtaagcttataagctaatttcttgtaactcatt 9235596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 38671376 - 38671302
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctttgtgagctc--ttatgctaatttcttgtaactcatttgtatcacttt 89  Q
    ||||||||||||||||| | || ||||||||||||||   ||| |||||||| ||||||| |||||||||||||||    
T  38671376 aaaatgggtagaaattagggtt-gttctttgtgagcttgtttaagctaatttattgtaacacatttgtatcacttt 38671302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 41649166 - 41649091
Alignment:
Q  14 gaaaaatgggtagaaattaagttttgttctttgtgagctcttat-gctaatttcttgtaactcatttgtatcacttt 89  Q
    ||||||| ||||||||||| |||| ||||||||||||||  | | |||||||||||||||| |||||||||| ||||    
T  41649166 gaaaaattggtagaaattaggttt-gttctttgtgagcttgtttagctaatttcttgtaacccatttgtatcccttt 41649091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 126
Target Start/End: Original strand, 1533443 - 1533505
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    ||||||||||| | |||||| |||||||||| || |||||||||||| |||||||||| |||||    
T  1533443 tttcttgtaaccc-tttgtaacactttcatcatattggattggagagatgctctctcccccaga 1533505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 126
Target Start/End: Complemental strand, 2058063 - 2058001
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    ||||||||||| | |||||| |||||||||| || |||||||||||| |||||||||| |||||    
T  2058063 tttcttgtaaccc-tttgtaacactttcatcatattggattggagagctgctctctcccccaga 2058001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 2479479 - 2479381
Alignment:
Q  19 atgggtagaaattaagttttgttctt-tgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctc 117  Q
    |||||||||||||| || |||||||| ||| ||||   | |||| |||||| |||||| |||||| |||||||||| ||||||||| ||||| |||||||    
T  2479479 atgggtagaaattaggtcttgttcttgtgtaagcttgcaagctattttcttataactc-tttgtaacactttcatcatagtggatttgagagctgctctc 2479381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 126
Target Start/End: Complemental strand, 18408861 - 18408799
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    ||||||||||| | |||||| |||||||||| || |||||||||||| |||||||||| |||||    
T  18408861 tttcttgtaaccc-tttgtaacactttcatcatactggattggagagctgctctctcccccaga 18408799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 126
Target Start/End: Complemental strand, 21639906 - 21639844
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    ||||||||||| | |||||| |||||||||  ||||||||||||||| |||||||||| |||||    
T  21639906 tttcttgtaaccc-tttgtaacactttcattatagtggattggagagctgctctctcccccaga 21639844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 21989006 - 21988918
Alignment:
Q  63 tttcttgtaactcattt-gtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||||||||||| ||| ||| ||||||||||  |||||||||||||| ||  ||||||||||||  |||| ||||| ||||||| |||||    
T  21989006 tttcttgtaactctttttgtaacactttcatcaaagtggattggagagttg--ctctcctccagattaggtcatattggaccgaactgggt 21988918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 3259009 - 3259083
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctttgtgagctc--ttatgctaatttcttgtaactcatttgtatcacttt 89  Q
    |||||||||||||| || | || ||||||||||||||   ||| |||||||| |||||||||||||||||| ||||    
T  3259009 aaaatgggtagaaactagggtt-gttctttgtgagcttgtttaagctaatttattgtaactcatttgtatctcttt 3259083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 25615867 - 25615937
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctttgtgagctc--ttatgctaatttcttgtaactcatttgtatca 85  Q
    ||||||||||||||||| |||| ||||| |||| |||   ||| |||||||||||||||| |||||||||||    
T  25615867 aaaatgggtagaaattaggttt-gttctatgtgcgcttgtttaagctaatttcttgtaacccatttgtatca 25615937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 88; Significance: 2e-42; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 7 - 146
Target Start/End: Complemental strand, 14521828 - 14521690
Alignment:
Q  7 gtgagatgaaaaatgggtagaaattaagttttgttctttgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattgga 106  Q
    |||| |||||||||| |||||||||| ||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| || ||||||    
T  14521828 gtgacatgaaaaatgtgtagaaattaggttgtgttctttgtgagctcttgtgctaattt-ttgtaactcatttgtatcactttcatcttattgaattgga 14521730  T
Q  107 gaggtgctctctcctccagaggaggttatattagaccgaa 146  Q
    |||||||||||||||| |||| |||| ||||| |||||||    
T  14521729 gaggtgctctctcctcgagagtaggtcatattggaccgaa 14521690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 15 - 138
Target Start/End: Original strand, 31076891 - 31077014
Alignment:
Q  15 aaaaatgggtagaaattaagttttgttctttgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgct 114  Q
    |||||||| || |||||| || ||||||||||||| |||||| |||||||| ||||||| ||||||||||||||| ||||||||||||||||||| ||||    
T  31076891 aaaaatggataaaaattaggtcttgttctttgtgaactcttaagctaatttattgtaacccatttgtatcacttttatcttagtggattggagagctgct 31076990  T
Q  115 ctctcctccagaggaggttatatt 138  Q
     ||||||  |||| |||| |||||    
T  31076991 atctcctagagagtaggtcatatt 31077014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 16 - 152
Target Start/End: Original strand, 10077115 - 10077252
Alignment:
Q  16 aaaatgggtagaaattaagttttgttcttt-gtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgct 114  Q
    ||||||||||||||||| || ||||||||| || ||||  || |||||||||||||||||  |||||| |||||||||| ||||||||||||| | ||||    
T  10077115 aaaatgggtagaaattaggtcttgttcttttgtaagcttataagctaatttcttgtaacttttttgtaacactttcatcatagtggattggagggctgct 10077214  T
Q  115 ctctcctccagaggaggttatattagaccgaattgggt 152  Q
    |||||| |||||  |||| ||||| |||||||||||||    
T  10077215 ctctcccccagattaggtcatattggaccgaattgggt 10077252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 152
Target Start/End: Original strand, 5572191 - 5572328
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctt-tgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgct 114  Q
    |||||| |||||||||| || |||||||| ||| ||||  || |||||||||||||||||| |||||| |||||||||| ||||||||||||| | ||||    
T  5572191 aaaatgcgtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgct 5572290  T
Q  115 ctctcctccagaggaggttatattagaccgaattgggt 152  Q
    |||||| | |||  |||| ||||| |||||||||||||    
T  5572291 ctctcccctagattaggtcatattggaccgaattgggt 5572328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 21801294 - 21801405
Alignment:
Q  16 aaaatgggtagaaattaagttttgttcttt-gtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgct 114  Q
    |||||||||||||||||||| ||||||||| || ||||  || | |||||||||||||||| |||||| |||||| ||||||||||||||||||| ||||    
T  21801294 aaaatgggtagaaattaagtcttgttcttttgtaagcttataagataatttcttgtaactcttttgtaacacttttatcttagtggattggagagctgct 21801393  T
Q  115 ctctcctccaga 126  Q
    | |||| |||||    
T  21801394 cgctcccccaga 21801405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 152
Target Start/End: Complemental strand, 31979661 - 31979523
Alignment:
Q  15 aaaaatgggtagaaattaagttttgttcttt-gtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgc 113  Q
    |||||||||||||||||| || ||||||||| || ||||  || | |||||||||||||||| |||| | |||||||||||||||||||||||| | |||    
T  31979661 aaaaatgggtagaaattaggtcttgttcttttgtaagcttataagttaatttcttgtaactcttttgcaacactttcatcttagtggattggagggctgc 31979562  T
Q  114 tctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||||| |||||  | || ||||| ||||||| |||||    
T  31979561 tctctcccccagattatgtcatattggaccgaactgggt 31979523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 120
Target Start/End: Original strand, 31086423 - 31086528
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctt-tgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgct 114  Q
    ||||||||||||||||| || ||| |||| ||| ||||  || |||||||||||||||||| |||||| |||||||||| ||||||||||||||| ||||    
T  31086423 aaaatgggtagaaattaggtcttgctcttgtgtaagcttataagctaatttcttgtaactcctttgtaacactttcatcatagtggattggagagttgct 31086522  T
Q  115 ctctcc 120  Q
    ||||||    
T  31086523 ctctcc 31086528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 18232992 - 18232862
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctt-tgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgct 114  Q
    ||||||||||||||||| || |||||||| ||| ||||  || ||| |||||||||||||| |||||| |||||||||| ||||| ||||||| | ||||    
T  18232992 aaaatgggtagaaattaggtcttgttcttgtgtaagcttataagctgatttcttgtaactcttttgtaacactttcatcatagtgaattggagggttgct 18232893  T
Q  115 ctctcctccagaggaggttatattagaccga 145  Q
    |||||| |||||  |||| ||||| ||||||    
T  18232892 ctctcccccagattaggtcatattggaccga 18232862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 15 - 155
Target Start/End: Original strand, 24435920 - 24436061
Alignment:
Q  15 aaaaatgggtagaaattaagttttgttcttt-gtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgc 113  Q
    |||||||||||||||||| || ||||| ||| || ||||  || ||||||||||||||| ||||||||| || ||||||| |||||||| |||| | |||    
T  24435920 aaaaatgggtagaaattaggtcttgtttttttgtaagcttataagctaatttcttgtaattcatttgtaacattttcatcctagtggatcggagggctgc 24436019  T
Q  114 tctctcctccagaggaggttatattagaccgaattgggttac 155  Q
    ||||||| | |||| |||| ||||| || |||| ||||||||    
T  24436020 tctctcccctagagtaggtcatattggatcgaactgggttac 24436061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 152
Target Start/End: Original strand, 5757430 - 5757565
Alignment:
Q  17 aaatgggtagaaattaagttttgttctt-tgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctc 115  Q
    |||||||||||||||| || |||||||| | | ||||   | |||| ||||||||||||| |||||| |||||||||| ||||||||||||||| |||||    
T  5757430 aaatgggtagaaattaggtcttgttcttgtataagcttgcaagctattttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctc 5757528  T
Q  116 tctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||| |||||  |||| ||||| ||||||| |||||    
T  5757529 tctcccccagattaggtcatattggaccgaactgggt 5757565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 118
Target Start/End: Complemental strand, 4630101 - 4629998
Alignment:
Q  16 aaaatgggtagaaattaagttttgttcttt-gtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgct 114  Q
    ||||| ||||||||||| || ||||||||| || ||||  || | |||||||||||||||  |||||| |||||||||||||||||||||||||| ||||    
T  4630101 aaaataggtagaaattaggtcttgttcttttgtaagcttataagttaatttcttgtaactattttgtaacactttcatcttagtggattggagagctgct 4630002  T
Q  115 ctct 118  Q
    ||||    
T  4630001 ctct 4629998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 145
Target Start/End: Complemental strand, 27165831 - 27165700
Alignment:
Q  15 aaaaatgggtagaaattaagttttgttctttgtgagctcttatgctaa-tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgc 113  Q
    |||||||| |||||||| ||||||||||| | | |||||||||||||| ||| ||||||| |  ||||||||||||||||||||| |||||||| | | |    
T  27165831 aaaaatggatagaaattcagttttgttctctataagctcttatgctaatttttttgtaaccccgttgtatcactttcatcttagttgattggagggctac 27165732  T
Q  114 tctctcctccagaggaggttatattagaccga 145  Q
    ||| ||| ||| || |||| ||||| ||||||    
T  27165731 tctgtcccccatagtaggtcatattggaccga 27165700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 21356134 - 21356046
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||||||||||| || ||| |||||||||| ||||||||||||||| ||||||||||||||||  |||| ||||| ||||||| |||||    
T  21356134 tttcttgtaactc-ttagtaacactttcatcatagtggattggagagctgctctctcctccagattaggtcatattggaccgaactgggt 21356046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 15 - 120
Target Start/End: Complemental strand, 22963846 - 22963741
Alignment:
Q  15 aaaaatgggtagaaattaagttttgttctttgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgct 114  Q
    |||||||||||||||||| |  ||||| | ||| || |  || |||||||||||||||||| |||||| |||||||||| ||||||||||||| | ||||    
T  22963846 aaaaatgggtagaaattacggcttgttttgtgtaaggttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgct 22963747  T
Q  115 ctctcc 120  Q
    ||||||    
T  22963746 ctctcc 22963741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 15 - 120
Target Start/End: Original strand, 23824547 - 23824652
Alignment:
Q  15 aaaaatgggtagaaattaagttttgttctttgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgct 114  Q
    |||||||||||||||||| |  ||||| | ||| || |  || |||||||||||||||||| |||||| |||||||||| ||||||||||||| | ||||    
T  23824547 aaaaatgggtagaaattacggcttgttttgtgtaaggttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgct 23824646  T
Q  115 ctctcc 120  Q
    ||||||    
T  23824647 ctctcc 23824652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 1115052 - 1115159
Alignment:
Q  13 tgaaaaatgggtagaaattaagttttgttctttgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtg 112  Q
    |||||||||| ||||||||| | |||||| ||| |||||| ||| | | ||||||||||||  |||||||||| | | ||| ||||||||||||||  ||    
T  1115052 tgaaaaatggatagaaattagggtttgttatttttgagcttttaagttgatttcttgtaacctatttgtatcattcttatcatagtggattggagatctg 1115151  T
Q  113 ctctctcc 120  Q
    ||||||||    
T  1115152 ctctctcc 1115159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 16569047 - 16569106
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctttgtgagct--cttatgctaatttcttgtaac 73  Q
    ||||||||||||||||| |||||||||||||||||||   ||| ||||||||||||||||    
T  16569047 aaaatgggtagaaattaggttttgttctttgtgagcttgtttaagctaatttcttgtaac 16569106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 74
Target Start/End: Complemental strand, 99303 - 99244
Alignment:
Q  15 aaaaatgggtagaaattaagttttgttctttgtgagctcttatgctaatttcttgtaact 74  Q
    |||||||||||||||||||  |||||||| ||||||||  || |||||||||||||||||    
T  99303 aaaaatgggtagaaattaaagtttgttctctgtgagcttctaagctaatttcttgtaact 99244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 102
Target Start/End: Original strand, 30518076 - 30518165
Alignment:
Q  13 tgaaaaatgggtagaaattaagttttgttctttgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggat 102  Q
    |||||||| ||||||||||||| |||||||||||||| || ||| | || |||| ||||||   ||||||||||| | ||| ||||||||    
T  30518076 tgaaaaataggtagaaattaaggtttgttctttgtgaacttttaagttagtttcatgtaacctctttgtatcactcttatcatagtggat 30518165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 22709102 - 22709054
Alignment:
Q  78 ttgtatcactttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    ||||| |||||||||| ||||||||||||||| |||||||||| |||||    
T  22709102 ttgtaacactttcatcatagtggattggagagctgctctctcccccaga 22709054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 31936671 - 31936603
Alignment:
Q  78 ttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaa 146  Q
    ||||| ||||||||| |||||||||||||||| |||||||||  |||||  |||| ||||| |||||||    
T  31936671 ttgtaacactttcatattagtggattggagagctgctctctctcccagactaggtcatattggaccgaa 31936603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 126
Target Start/End: Original strand, 5674769 - 5674831
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    ||||||||||| | |||||| |||||||||| || |||||||||||| |||||||||| |||||    
T  5674769 tttcttgtaaccc-tttgtaacactttcatcatattggattggagagctgctctctcccccaga 5674831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 28137562 - 28137494
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctttgtgagctc--ttatgctaatttcttgtaactcatttgtat 83  Q
    ||||||||||||||||| | || ||||||||||||||   ||| |||||||||||||||| |||||||||    
T  28137562 aaaatgggtagaaattagggtt-gttctttgtgagcttgtttaagctaatttcttgtaacccatttgtat 28137494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 79
Target Start/End: Complemental strand, 22424983 - 22424917
Alignment:
Q  14 gaaaaatgggtagaaattaagttttgttctttgtgagct--cttatgctaatttcttgtaactcattt 79  Q
    |||||||||||||||||| ||  ||||||||||||||||   ||| |||||||||||||||| |||||    
T  22424983 gaaaaatgggtagaaatt-agggttgttctttgtgagcttgtttaagctaatttcttgtaacccattt 22424917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 84; Significance: 5e-40; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 15 - 154
Target Start/End: Original strand, 17345469 - 17345607
Alignment:
Q  15 aaaaatgggtagaaattaagttttgttctttgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgct 114  Q
    |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| | |||||||| ||| |||||||||||||||||||||| | ||    
T  17345469 aaaaatgggtagaaattaggttttgttctttgtgggctcttatgctaatttcttgtagcacatttgtaccacgttcatcttagtggattggagagctcct 17345568  T
Q  115 ctctcctccagaggaggttatattagaccgaattgggtta 154  Q
    || ||| |||||| |||| ||||||||||||| |||||||    
T  17345569 ctttcc-ccagagtaggtcatattagaccgaactgggtta 17345607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 152
Target Start/End: Complemental strand, 19073075 - 19072938
Alignment:
Q  16 aaaatgggtagaaattaagttttgttcttt-gtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgct 114  Q
    ||||||||||||||||| || ||||||||| || ||||  || |||||||||||||||||| |||||| |||||||||||||||||||||||||| ||||    
T  19073075 aaaatgggtagaaattaggtattgttcttttgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcttagtggattggagagctgct 19072976  T
Q  115 ctctcctccagaggaggttatattagaccgaattgggt 152  Q
    |||||| |||||  |||| ||||| ||||||| |||||    
T  19072975 ctctcccccagattaggtcatattggaccgaactgggt 19072938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 152
Target Start/End: Complemental strand, 19120965 - 19120828
Alignment:
Q  16 aaaatgggtagaaattaagttttgttcttt-gtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgct 114  Q
    ||||||||||||||||| || ||||||||| || ||||  || |||||||||||||||||| |||||| |||||||||||||||||||||||||| ||||    
T  19120965 aaaatgggtagaaattaggtattgttcttttgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcttagtggattggagagctgct 19120866  T
Q  115 ctctcctccagaggaggttatattagaccgaattgggt 152  Q
    |||||| |||||  |||| ||||| ||||||| |||||    
T  19120865 ctctcccccagattaggtcatattggaccgaactgggt 19120828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 13 - 155
Target Start/End: Complemental strand, 22819578 - 22819435
Alignment:
Q  13 tgaaaaatgggtagaaattaagttttgttctttgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtg 112  Q
    |||||||||| ||||||||| || || |||||||||||||   | |||||||||||||||||||||||||||||||||||||| ||||||||||| | |     
T  22819578 tgaaaaatggttagaaattatgtcttattctttgtgagctaaaaagctaatttcttgtaactcatttgtatcactttcatcttggtggattggagggcta 22819479  T
Q  113 ctctct-cctccagaggaggttatattagaccgaattgggttac 155  Q
    |||||| || |||||| |||| ||||| |||| |||||||||||    
T  22819478 ctctctccccccagagtaggtcatattggaccaaattgggttac 22819435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 13 - 109
Target Start/End: Original strand, 9023787 - 9023883
Alignment:
Q  13 tgaaaaatgggtagaaattaagttttgttctttgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagag 109  Q
    |||||| ||||||||||||| || || ||||||||||||| |||||||||||| ||||| | |||||||||||||||||||||||||||||||||||    
T  9023787 tgaaaagtgggtagaaattaggtcttattctttgtgagcttttatgctaatttattgtatcccatttgtatcactttcatcttagtggattggagag 9023883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 16 - 152
Target Start/End: Original strand, 47703886 - 47704023
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctt-tgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgct 114  Q
    ||||||||||||||||| || |||||||| ||| ||||  || ||||||||||||||| || |||||| |||||||||| ||||||||||||||| ||||    
T  47703886 aaaatgggtagaaattaggtcttgttcttgtgtaagcttgtaagctaatttcttgtaattcttttgtaacactttcatcatagtggattggagagctgct 47703985  T
Q  115 ctctcctccagaggaggttatattagaccgaattgggt 152  Q
    |||||| |||||  |||| ||||| ||||||| |||||    
T  47703986 ctctcccccagattaggtcatattggaccgaactgggt 47704023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 146
Target Start/End: Original strand, 16124466 - 16124597
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctt-tgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgct 114  Q
    ||||||||||||||||| || |||||||| ||| ||||  || |||||||||||||||||| |||||| |||||||||| ||||||||||||| | ||||    
T  16124466 aaaatgggtagaaattaggtcttgttcttatgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgct 16124565  T
Q  115 ctctcctccagaggaggttatattagaccgaa 146  Q
    |||||| |||||  |||| ||||| |||||||    
T  16124566 ctctcccccagattaggtcatattggaccgaa 16124597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 58 - 146
Target Start/End: Original strand, 27104365 - 27104453
Alignment:
Q  58 gctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaa 146  Q
    |||||||||||||||||| |||||| |||||||||| ||||||||||||||| |||||||||| |||||  |||||||||| |||||||    
T  27104365 gctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggttatattggaccgaa 27104453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 152
Target Start/End: Complemental strand, 13598545 - 13598408
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctt-tgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgct 114  Q
    |||||| ||||||||||||| |||||||| ||| ||||  || |||||||||||||| ||| |||||| |||||||||| |||||||||| || | ||||    
T  13598545 aaaatgagtagaaattaagtcttgttcttgtgtaagcttataagctaatttcttgtatctcttttgtaacactttcatcatagtggattgaagggctgct 13598446  T
Q  115 ctctcctccagaggaggttatattagaccgaattgggt 152  Q
    |||||| |||||  |||| ||||| ||||||| |||||    
T  13598445 ctctcccccagattaggtcatattggaccgaactgggt 13598408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 152
Target Start/End: Complemental strand, 29651958 - 29651821
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctt-tgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgct 114  Q
    ||||||||||||||||| || |||||||| ||| ||||  || | ||||||||||||| || |||||| |||||||||| ||||||||||||| | ||||    
T  29651958 aaaatgggtagaaattaggtcttgttcttgtgtaagcttataagttaatttcttgtaattcttttgtaacactttcatcatagtggattggagtgctgct 29651859  T
Q  115 ctctcctccagaggaggttatattagaccgaattgggt 152  Q
    |||||| |||||  |||| ||||| ||||||| |||||    
T  29651858 ctctcccccagattaggtcatattggaccgaactgggt 29651821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 152
Target Start/End: Original strand, 47098775 - 47098911
Alignment:
Q  16 aaaatgggtagaaattaagttttgttcttt-gtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgct 114  Q
    ||||||||||||||||| |  ||||||||| || ||||  || ||||||||||||||||||||| ||| |||||||||||||||||||||||| | ||||    
T  47098775 aaaatgggtagaaattaggacttgttcttttgtaagcttataagctaatttcttgtaactcatt-gtaacactttcatcttagtggattggagggctgct 47098873  T
Q  115 ctctcctccagaggaggttatattagaccgaattgggt 152  Q
    |||||| |||||   ||| ||||| ||||||| |||||    
T  47098874 ctctcccccagattcggtcatattggaccgaactgggt 47098911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 152
Target Start/End: Complemental strand, 9476408 - 9476271
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctt-tgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgct 114  Q
    ||||||| ||||||||| || |||||||| ||| ||||  || ||||||||||| |||||| ||||||  ||||||||| ||||||||||||||| ||||    
T  9476408 aaaatggatagaaattaggtcttgttcttgtgtaagcttgtaagctaatttcttataactcttttgtaatactttcatcatagtggattggagagctgct 9476309  T
Q  115 ctctcctccagaggaggttatattagaccgaattgggt 152  Q
    |||||| | |||  |||| ||||| ||||||| |||||    
T  9476308 ctctcccctagattaggtcatattggaccgaactgggt 9476271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 152
Target Start/End: Complemental strand, 3281853 - 3281718
Alignment:
Q  17 aaatgggtagaaattaagttttgttctt-tgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctc 115  Q
    |||||||||||||||| || |||||||| ||| ||||   | |||| ||||||||||||| |||||| |||||||||| | ||||||||||||| |||||    
T  3281853 aaatgggtagaaattaggtcttgttcttgtgtaagcttgcaagctattttcttgtaactc-tttgtaacactttcatcatcgtggattggagagctgctc 3281755  T
Q  116 tctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||| |||||  |||| ||||| ||||||| |||||    
T  3281754 tctcccccagattaggtcatattggaccgaactgggt 3281718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 152
Target Start/End: Original strand, 26644849 - 26644984
Alignment:
Q  17 aaatgggtagaaattaagttttgttctt-tgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctc 115  Q
    |||||||||||||||| || |||||||| ||| ||||   | |||| ||||||||||||| |||||| |||||||||| || |||||||||||| |||||    
T  26644849 aaatgggtagaaattaggtcttgttcttgtgtaagcttgcaagctattttcttgtaactc-tttgtaacactttcatcataatggattggagagctgctc 26644947  T
Q  116 tctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||| |||||  |||| ||||| ||||||| |||||    
T  26644948 tctcccccagattaggtcatattggaccgaactgggt 26644984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 35109485 - 35109556
Alignment:
Q  13 tgaaaaatgggtagaaattaagttttgttctttgtgagctcttatgctaatttcttgtaactcatttgtatc 84  Q
    |||||| ||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||  |||||||||    
T  35109485 tgaaaattgggtagaaattaaggtttgttctttgtgagcttttaagctaatttcttgtaacctatttgtatc 35109556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 146
Target Start/End: Complemental strand, 32889595 - 32889455
Alignment:
Q  7 gtgagatgaaaaatgggtagaaattaagttttgttctt-tgtgagctcttatgctaattt-cttgtaactcatttgtatcactttcatcttagtggattg 104  Q
    |||| ||||||||||||||||||||| |  |||||||| ||| ||||   | |||| ||| ||||||||||||| ||| |||||||||||||||||||||    
T  32889595 gtgatatgaaaaatgggtagaaattaggacttgttcttgtgtaagcttgcaagctatttttcttgtaactcatt-gtaacactttcatcttagtggattg 32889497  T
Q  105 gagaggtgctctctcctccagaggaggttatattagaccgaa 146  Q
    ||||| |||||| ||| |||||  |||| ||||| |||||||    
T  32889496 gagagctgctctatcccccagactaggtcatattggaccgaa 32889455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 77 - 152
Target Start/End: Complemental strand, 775757 - 775682
Alignment:
Q  77 tttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    |||||| |||||||||||||||||||||||||| | |||||||| |||||  |||| ||||| |||||||||||||    
T  775757 tttgtaacactttcatcttagtggattggagagctactctctcccccagattaggtcatattggaccgaattgggt 775682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 123
Target Start/End: Original strand, 918428 - 918538
Alignment:
Q  13 tgaaaaatgggtagaaattaagttttgttctttgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtg 112  Q
    |||||||||||||||||||| | ||||||||||||||| |  || | |||||||||||||    ||||||||||| | ||| |||||| |||||||| |     
T  918428 tgaaaaatgggtagaaattatggtttgttctttgtgagtttgtaagataatttcttgtaatatctttgtatcactcttatcatagtggtttggagagttt 918527  T
Q  113 ctctctcctcc 123  Q
    |||||||||||    
T  918528 ctctctcctcc 918538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 123
Target Start/End: Original strand, 11032268 - 11032378
Alignment:
Q  13 tgaaaaatgggtagaaattaagttttgttctttgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtg 112  Q
    |||||||||||||||||||| ||||||||||||||||| | |||  |||||||||||||||   ||| ||||||| | ||| ||||||||  || || ||    
T  11032268 tgaaaaatgggtagaaattatgttttgttctttgtgagtttttaatctaatttcttgtaacctctttatatcactattatcatagtggatcagatagttg 11032367  T
Q  113 ctctctcctcc 123  Q
    |||| ||||||    
T  11032368 ctctatcctcc 11032378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 126
Target Start/End: Original strand, 21536525 - 21536630
Alignment:
Q  21 gggtagaaattaagttttgttctt-tgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctc 119  Q
    ||||||||||||||| |||||||| ||| ||||   | |||| ||||||||||||| |||||| |||||||||  ||||||||||||||| |||||||||    
T  21536525 gggtagaaattaagtattgttcttgtgtaagcttgcaagctattttcttgtaactc-tttgtaacactttcattatagtggattggagagctgctctctc 21536623  T
Q  120 ctccaga 126  Q
    | |||||    
T  21536624 ccccaga 21536630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 8550941 - 8550867
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctttgtgagctc--ttatgctaatttcttgtaactcatttgtatcacttt 89  Q
    ||||||||||||||||| |||| ||||||||||||||   ||| ||||||||||||||||||||||||||| ||||    
T  8550941 aaaatgggtagaaattaggttt-gttctttgtgagcttgtttaagctaatttcttgtaactcatttgtatcccttt 8550867  T

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Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 45644509 - 45644434
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctttgtgagctctt--atgctaatttcttgtaactcatttgtatcacttt 89  Q
    ||||||| |||||||||||||||||||||||||||||  |  | |||||||||||| |||||||||||||| ||||    
T  45644509 aaaatggatagaaattaagttttgttctttgtgagcttgtcaaagctaatttcttgcaactcatttgtatctcttt 45644434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 132
Target Start/End: Original strand, 32736944 - 32737063
Alignment:
Q  13 tgaaaaatgggtagaaattaagttttgttctttgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtg 112  Q
    |||||||||||||||||||| | |||||||||| ||| || ||| |||||||| |||||||   |||||||||| |||||| |||| |||  ||||| |     
T  32736944 tgaaaaatgggtagaaattagggtttgttctttatgaacttttaagctaattttttgtaacctctttgtatcaccttcatcatagttgatcagagagttt 32737043  T
Q  113 ctctctcctccagaggaggt 132  Q
    |||||||  |||||| ||||    
T  32737044 ctctctctcccagagtaggt 32737063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 40122354 - 40122278
Alignment:
Q  14 gaaaaatgggtagaaattaagttttgttctttgtgagctc--ttatgctaatttcttgtaactcatttgtatcacttt 89  Q
    ||||||||||| ||||||| | |||||||||||||||||   ||| ||||||||||| ||||||||||||||||||||    
T  40122354 gaaaaatgggtcgaaatta-gatttgttctttgtgagcttgtttaagctaatttcttataactcatttgtatcacttt 40122278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 152
Target Start/End: Original strand, 47102837 - 47102928
Alignment:
Q  60 taatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||||||||||||||||| ||| || ||||||||||||||||||||  | |||||||||| | |||  |||| ||||| ||||||| |||||    
T  47102837 taatttcttgtaactcatt-gtaacattttcatcttagtggattggatggctgctctctcccctagattaggtcatattggaccgaactgggt 47102928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 126
Target Start/End: Original strand, 24202768 - 24202830
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    ||||||||||| | |||||| |||||||||| ||||||||||||||| |||||||||| |||||    
T  24202768 tttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctcccccaga 24202830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 40816765 - 40816844
Alignment:
Q  17 aaatgggtagaaattaagttttgttcttt-gtgagctcttatgctaatttcttgtaactcatttgtatcactttcatctt 95  Q
    ||||| |||||||||| || ||||||||| || ||||  || |||||||||||||||||| |||||| ||||||||||||    
T  40816765 aaatgagtagaaattaggtcttgttcttttgtaagcttataagctaatttcttgtaactcttttgtaacactttcatctt 40816844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 108
Target Start/End: Original strand, 48382441 - 48382524
Alignment:
Q  25 agaaattaagttttgttctttgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggaga 108  Q
    |||||||| | |||| ||||||||| ||  || | ||||||||||||||  |||||||||||||||||| || |||||||||||    
T  48382441 agaaattagggtttgatctttgtgaacttgtaagttaatttcttgtaacctatttgtatcactttcatcatattggattggaga 48382524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 10997105 - 10997031
Alignment:
Q  13 tgaaaaatgggtagaaattaagttttgttctttgtgagctcttatgctaatttcttgtaactcatttgtatcact 87  Q
    |||||||||||||||||||| | |||||| ||||| | || ||| | ||||||||||||||  ||||||||||||    
T  10997105 tgaaaaatgggtagaaattagggtttgttatttgttatcttttaagttaatttcttgtaacatatttgtatcact 10997031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 120
Target Start/End: Original strand, 13604622 - 13604678
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcc 120  Q
    ||||||||||||| |||||| || ||||||| ||||||||||||||| ||||||||||    
T  13604622 tttcttgtaactc-tttgtaacattttcatcatagtggattggagagctgctctctcc 13604678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 120
Target Start/End: Original strand, 19358842 - 19358898
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcc 120  Q
    ||||||||||| | |||||| |||||||||| ||||||||||||||| ||||||||||    
T  19358842 tttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctcc 19358898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 120
Target Start/End: Original strand, 19361431 - 19361487
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcc 120  Q
    ||||||||||| | |||||| |||||||||| ||||||||||||||| ||||||||||    
T  19361431 tttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctcc 19361487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 120
Target Start/End: Original strand, 19380071 - 19380127
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcc 120  Q
    ||||||||||| | |||||| |||||||||| ||||||||||||||| ||||||||||    
T  19380071 tttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctcc 19380127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 8281444 - 8281378
Alignment:
Q  36 tttgttctttgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggat 102  Q
    ||||||||||||||||  ||||| ||||||||||||||  |||||||||| | | ||| ||||||||    
T  8281444 tttgttctttgtgagcgattatgttaatttcttgtaacatatttgtatcattcttatcatagtggat 8281378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 197062 - 196988
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctttgtgagctc--ttatgctaatttcttgtaactcatttgtatcacttt 89  Q
    ||||| ||||||||||| | || ||||||||||||||   ||| | ||||||||||||||||||||||||| ||||    
T  197062 aaaattggtagaaattagggtt-gttctttgtgagcttgtttaagttaatttcttgtaactcatttgtatcccttt 196988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 834321 - 834247
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctttgtgagctc--ttatgctaatttcttgtaactcatttgtatcacttt 89  Q
    ||||||| ||||||||| | || ||||||||||||||   ||| |||||||||||||||| |||||||||| ||||    
T  834321 aaaatggatagaaattagggtt-gttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatcccttt 834247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 89
Target Start/End: Original strand, 46064951 - 46065006
Alignment:
Q  36 tttgttctttgtgagctctt--atgctaatttcttgtaactcatttgtatcacttt 89  Q
    |||||||||||||||||| |  | |||||||||||||||||||| |||||| ||||    
T  46064951 tttgttctttgtgagctcgttgaagctaatttcttgtaactcatgtgtatctcttt 46065006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 78; Significance: 2e-36; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 16 - 155
Target Start/End: Original strand, 11181782 - 11181923
Alignment:
Q  16 aaaatgggtagaaattaagttttgttc-tttgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgct 114  Q
    ||||||||||||||||| || |||||| |||| ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||    
T  11181782 aaaatgggtagaaattaggtcttgttcatttgagagcttttaggctaatttcttgtaactcatttgtatcactttcatcttagtggattggagggttgct 11181881  T
Q  115 ctctcctcc-agaggaggttatattagaccgaattgggttac 155  Q
    |||||| || |||| |||| ||||||||||||| | ||||||    
T  11181882 ctctccccctagagtaggtcatattagaccgaactaggttac 11181923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 13 - 146
Target Start/End: Original strand, 33030888 - 33031021
Alignment:
Q  13 tgaaaaatgggtagaaattaagttttgttctttgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtg 112  Q
    |||||||||||||||||||| ||||||||||||||||||| ||| |||||||||||||||| |  ||| |||||||||||||||||| ||||||||| ||    
T  33030888 tgaaaaatgggtagaaattatgttttgttctttgtgagcttttaagctaatttcttgtaaccccattgcatcactttcatcttagtgaattggagagctg 33030987  T
Q  113 ctctctcctccagaggaggttatattagaccgaa 146  Q
    |||||||| |||||| | || ||||| |||||||    
T  33030988 ctctctcccccagagtatgtcatatttgaccgaa 33031021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 152
Target Start/End: Complemental strand, 10281898 - 10281761
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctt-tgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgct 114  Q
    ||||||||||||||||| || |||||||| ||| ||||  || |||||||||||||||||| |||||| |||||||||| ||||||||||||||| ||||    
T  10281898 aaaatgggtagaaattaggtcttgttcttgtgtaagcttgtaagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgct 10281799  T
Q  115 ctctcctccagaggaggttatattagaccgaattgggt 152  Q
    |||||| |||||  |||| ||||| ||||||| |||||    
T  10281798 ctctcccccagatcaggtcatattggaccgaactgggt 10281761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 13 - 127
Target Start/End: Complemental strand, 6742001 - 6741887
Alignment:
Q  13 tgaaaaatgggtagaaattaagttttgttctttgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtg 112  Q
    ||||||||| |||||||||| ||||||||||||||||| |   | |||||||||||||||||  |||||||||||| ||||||| |||||||||||| ||    
T  6742001 tgaaaaatgagtagaaattaggttttgttctttgtgagtttgcaagctaatttcttgtaacttctttgtatcacttccatcttaatggattggagagctg 6741902  T
Q  113 ctctctcctccagag 127  Q
    |||| ||| ||||||    
T  6741901 ctctatcccccagag 6741887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 7 - 152
Target Start/End: Original strand, 42127352 - 42127497
Alignment:
Q  7 gtgagatgaaaaatgggtagaaattaagttttgttcttt-gtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattgg 105  Q
    |||| |||||||||||||||||| || |  ||||||||| || ||||  || ||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  42127352 gtgatatgaaaaatgggtagaaagtaggacttgttcttttgtaagcttataagctaatttcttgtaactcatt-gtaacactttcatcttagtggattgg 42127450  T
Q  106 agaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
     | | |||||||||| |||||  |||| |||||||| |||| |||||    
T  42127451 ggggctgctctctcccccagattaggtcatattagatcgaactgggt 42127497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 23 - 120
Target Start/End: Original strand, 7160861 - 7160958
Alignment:
Q  23 gtagaaattaagttttgttctttgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcc 120  Q
    ||||||||||||| |||||||||||||||| | |  ||||||| ||||||| | |||||||||||||||||| |||||||||||||| || |||||||    
T  7160861 gtagaaattaagtcttgttctttgtgagctttaaatctaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgatctctcc 7160958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 118
Target Start/End: Complemental strand, 3880446 - 3880343
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctt-tgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgct 114  Q
    ||||||||||||||||| || |||||||| ||| ||||  ||  ||||||||||||||||| |||||| |||||||||| ||||||||||||||| ||||    
T  3880446 aaaatgggtagaaattaggtcttgttcttgtgtaagcttgtaaactaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgct 3880347  T
Q  115 ctct 118  Q
    ||||    
T  3880346 ctct 3880343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 7 - 146
Target Start/End: Complemental strand, 28832412 - 28832275
Alignment:
Q  7 gtgagatgaaaaatgggtagaaattaagttttgttctttgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattgga 106  Q
    |||| |||||||||||||||||||||    ||||||||| ||  ||  || ||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  28832412 gtgatatgaaaaatgggtagaaattagaacttgttcttt-tgtacttataagctaatttcttgtaactcatt-gtaacactttcatcttagtggattgga 28832315  T
Q  107 gaggtgctctctcctccagaggaggttatattagaccgaa 146  Q
    | | |||||||||| |||||  |||| ||||| |||||||    
T  28832314 gggctgctctctcccccagattaggtcatattggaccgaa 28832275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 12084127 - 12084228
Alignment:
Q  17 aaatgggtagaaattaagttttgttctt-tgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctc 115  Q
    |||||||||||||||| || |||||||| ||| |||| ||| | |||||||||||||||| |||||| |||||||||| ||||||||||||||| |||||    
T  12084127 aaatgggtagaaattaggtcttgttcttgtgtaagcttttaagttaatttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctc 12084225  T
Q  116 tct 118  Q
    |||    
T  12084226 tct 12084228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 146
Target Start/End: Complemental strand, 2630380 - 2630247
Alignment:
Q  13 tgaaaaatgggtagaaattaagttttgttctttgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtg 112  Q
    |||||||||  || |||||| ||||||||||||||| | | ||| |||||||| ||||||| | ||||||||||||||||| |||||||||| |||| ||    
T  2630380 tgaaaaatgtataaaaattaggttttgttctttgtgtgtttttaagctaatttattgtaacccttttgtatcactttcatcatagtggattgaagagctg 2630281  T
Q  113 ctctctcctccagaggaggttatattagaccgaa 146  Q
    || |||||  || || |||| ||||| |||||||    
T  2630280 ctatctccctcaaagcaggtcatattggaccgaa 2630247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 9353331 - 9353419
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||||||||||| |||||| |||||||||| ||||||||||||||| |||||||||| |||||  |||| ||||| ||||||| |||||    
T  9353331 tttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggt 9353419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 152
Target Start/End: Original strand, 11916922 - 11917059
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctt-tgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgct 114  Q
    ||||||||||||||||| || |||||||| ||| ||||   |  ||| ||||||||||||| |||||| |||||||||  ||||||||||||||| ||||    
T  11916922 aaaatgggtagaaattaggtcttgttcttgtgtaagcttgcaaactattttcttgtaactcttttgtaacactttcattatagtggattggagagctgct 11917021  T
Q  115 ctctcctccagaggaggttatattagaccgaattgggt 152  Q
    |||||| ||| |  |||| ||||| ||||||| |||||    
T  11917022 ctctcccccatattaggtcatattggaccgaactgggt 11917059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 120
Target Start/End: Complemental strand, 19588893 - 19588788
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctt-tgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgct 114  Q
    |||| |||||||||||| || |||||||| ||| ||||  || | |||||||||||||||| |||||| |||||||||| ||||||||||||| | ||||    
T  19588893 aaaaagggtagaaattaggtcttgttcttgtgtaagcttataaggtaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgct 19588794  T
Q  115 ctctcc 120  Q
    ||||||    
T  19588793 ctctcc 19588788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 36932349 - 36932437
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||||||||||| |||||| |||||||||| ||||||||||||||| |||||||||| |||||  |||| ||||| ||||||| |||||    
T  36932349 tttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggt 36932437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 17 - 152
Target Start/End: Original strand, 17003911 - 17004047
Alignment:
Q  17 aaatgggtagaaattaagttttgttctt-tgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctc 115  Q
    |||||||||||||||| || |||||||| ||| ||||  || | |||||| ||||||||| |||| |  ||||||||| |||||||||| |||| |||||    
T  17003911 aaatgggtagaaattaggtcttgttcttgtgtaagcttgtaagttaattttttgtaactcttttgaaatactttcatcatagtggattgaagagctgctc 17004010  T
Q  116 tctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||| |||||  |||| ||||| ||||||| |||||    
T  17004011 tctcccccagattaggtcatattggaccgaactgggt 17004047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 15464630 - 15464542
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||||||||||| |||||| |||||||||| ||||||||||||||| |||||||||| |||||  || | ||||| ||||||| |||||    
T  15464630 tttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctctctcccccagattagatcatattggaccgaactgggt 15464542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 152
Target Start/End: Complemental strand, 14520375 - 14520240
Alignment:
Q  17 aaatgggtagaaattaagttttgttctt-tgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctc 115  Q
    |||||||||||||||| || |||||||| ||| ||||   | |||| ||||||||||||| |||||| |||||||||| |||||||||| |||| |||||    
T  14520375 aaatgggtagaaattaggtcttgttcttgtgtaagcttgcaagctattttcttgtaactc-tttgtaacactttcatcatagtggattgaagagctgctc 14520277  T
Q  116 tctcctccagaggaggttatattagaccgaattgggt 152  Q
    || || | |||  |||| ||||| ||||||| |||||    
T  14520276 tcccccctagattaggtcatattggaccgaactgggt 14520240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 89
Target Start/End: Original strand, 33831692 - 33831768
Alignment:
Q  14 gaaaaatgggtagaaattaagttttgttctttgtgagctc--ttatgctaatttcttgtaactcatttgtatcacttt 89  Q
    ||||||||||||||||||| |||| ||||||||||||||   ||| |||||||||||||||| |||||||||| ||||    
T  33831692 gaaaaatgggtagaaattaggttt-gttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatctcttt 33831768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 126
Target Start/End: Complemental strand, 38192271 - 38192209
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    ||||||||||| | |||||| |||||||||| ||||||||||||||| |||||||||| |||||    
T  38192271 tttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctcccccaga 38192209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 126
Target Start/End: Complemental strand, 38219496 - 38219434
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    ||||||||||| | |||||| |||||||||| ||||||||||||||| |||||||||| |||||    
T  38219496 tttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctcccccaga 38219434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 58 - 120
Target Start/End: Original strand, 24553501 - 24553561
Alignment:
Q  58 gctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcc 120  Q
    ||||||||||||||||||||| ||| |||||||||||||||||| ||||| | ||||||||||    
T  24553501 gctaatttcttgtaactcatt-gtaacactttcatcttagtggagtggag-gctgctctctcc 24553561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 31300595 - 31300683
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||||| ||||||||  || |||||||||||||||||||||||||| | ||||||||  ||||  |||| ||||| ||||||| |||||    
T  31300595 tttcttgcaactcatta-taacactttcatcttagtggattggagagtttctctctccctcagactaggtcatattggaccgaactgggt 31300683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 5887570 - 5887496
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctttgtgagctc--ttatgctaatttcttgtaactcatttgtatcacttt 89  Q
    ||||||| ||||||||| | |||||||||||||||||   ||| |||||||||||| ||| |||||||||||||||    
T  5887570 aaaatggatagaaatta-gatttgttctttgtgagcttgtttaagctaatttcttgcaacccatttgtatcacttt 5887496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 8566100 - 8566031
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctttgtgagctc--ttatgctaatttcttgtaactcatttgtatc 84  Q
    ||||||||||||| ||| |||| ||||||||||||||   ||| |||||||||||||||| ||||||||||    
T  8566100 aaaatgggtagaacttaggttt-gttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatc 8566031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 126
Target Start/End: Complemental strand, 24135946 - 24135884
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    ||||||||||| | |||||| |||||||||||||||| |||||| || |||||||||| |||||    
T  24135946 tttcttgtaaccc-tttgtaacactttcatcttagtgcattggatagctgctctctcccccaga 24135884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 119
Target Start/End: Complemental strand, 28537712 - 28537669
Alignment:
Q  76 atttgtatcactttcatcttagtggattggagaggtgctctctc 119  Q
    |||| ||||||||| ||||||||||||||||||| |||||||||    
T  28537712 atttatatcacttttatcttagtggattggagagctgctctctc 28537669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 3651649 - 3651613
Alignment:
Q  13 tgaaaaatgggtagaaattaagttttgttctttgtga 49  Q
    |||||||||||||||||||| | ||||||||||||||    
T  3651649 tgaaaaatgggtagaaattagggtttgttctttgtga 3651613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 69; Significance: 5e-31; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 16 - 155
Target Start/End: Original strand, 39774255 - 39774395
Alignment:
Q  16 aaaatgggtagaaattaagttttgtt-ctttgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgct 114  Q
    ||||| ||||||||||| || ||||| ||||||||||| ||| ||||||||||||||||  ||||||||||||||||| |||||||||||||||| ||||    
T  39774255 aaaattggtagaaattaggtcttgtttctttgtgagcttttaagctaatttcttgtaacctatttgtatcactttcattttagtggattggagagctgct 39774354  T
Q  115 ctctcctccagaggaggttatattagaccgaattgggttac 155  Q
    || ||| |||||| |||| ||||| ||||||| || |||||    
T  39774355 ctatcccccagagtaggtcatattggaccgaactgagttac 39774395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 24 - 155
Target Start/End: Original strand, 1983259 - 1983390
Alignment:
Q  24 tagaaattaagttttgttctttgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctcc 123  Q
    ||||||||| |||||||||||||||||||   | |||||||||||||||| | ||||||||||||| ||| ||||||||||||||| |||| ||||| ||    
T  1983259 tagaaattatgttttgttctttgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctagtggattggagagctgctatctccccc 1983358  T
Q  124 agaggaggttatattagaccgaattgggttac 155  Q
    | || |||| ||||| ||||||| ||||||||    
T  1983359 atagtaggtcatattggaccgaactgggttac 1983390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 137
Target Start/End: Complemental strand, 18377506 - 18377384
Alignment:
Q  16 aaaatgggtagaaattaagttttgtt-ctttgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgct 114  Q
    ||||||||||||||||| |  ||||| ||||||||||| ||| ||| ||||||| |||| ||||||||||||||||||||||||||| ||||| | ||||    
T  18377506 aaaatgggtagaaattagggcttgtttctttgtgagcttttaagctgatttcttataacccatttgtatcactttcatcttagtggaatggagggctgct 18377407  T
Q  115 ctctcctccagaggaggttatat 137  Q
    ||||||||||||| |||| ||||    
T  18377406 ctctcctccagagtaggtcatat 18377384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 16 - 152
Target Start/End: Complemental strand, 10047526 - 10047389
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctt-tgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgct 114  Q
    ||||||||||||||||| || |||||||| ||| ||||  || |||||||||||||||||| |||||| |||||||||| ||||||||||||| | ||||    
T  10047526 aaaatgggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgct 10047427  T
Q  115 ctctcctccagaggaggttatattagaccgaattgggt 152  Q
    |||||| |||||  |||| ||||| ||||||| |||||    
T  10047426 ctctcccccagattaggtcatattggaccgaactgggt 10047389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 16 - 152
Target Start/End: Original strand, 16623243 - 16623380
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctt-tgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgct 114  Q
    ||||||||||||||||| || |||||||| ||| ||||  |  |||||||||||||||||| |||||| |||||||||| ||||||||||||||| ||||    
T  16623243 aaaatgggtagaaattaggtcttgttcttctgtaagcttattagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgct 16623342  T
Q  115 ctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||||||||||  |||| |||||  |||||| |||||    
T  16623343 ctctcctccagattaggtcatattgaaccgaactgggt 16623380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 13 - 119
Target Start/End: Complemental strand, 37782011 - 37781905
Alignment:
Q  13 tgaaaaatgggtagaaattaagttttgttctttgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtg 112  Q
    |||||||||||||||||||||| ||||||||||||||| | ||| ||||||||||||||||   ||||||||||||| ||  ||||||||||||||| |     
T  37782011 tgaaaaatgggtagaaattaagatttgttctttgtgagtttttaagctaatttcttgtaacctctttgtatcacttttattatagtggattggagagtta 37781912  T
Q  113 ctctctc 119  Q
    |||||||    
T  37781911 ctctctc 37781905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 17 - 152
Target Start/End: Original strand, 36315181 - 36315316
Alignment:
Q  17 aaatgggtagaaattaagttttgttctt-tgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctc 115  Q
    |||||||||||||||| || ||| |||| ||| ||||  || |||||||||||||||||| |||||| |||||||||| ||||||||||||||| |||||    
T  36315181 aaatgggtagaaattaggtcttgctcttgtgtaagcttctaagctaatttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctc 36315279  T
Q  116 tctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||| |||||  |||| ||||| ||||||| |||||    
T  36315280 tctcccccagattaggtcatattggaccgaactgggt 36315316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 17 - 152
Target Start/End: Original strand, 36329390 - 36329525
Alignment:
Q  17 aaatgggtagaaattaagttttgttctt-tgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctc 115  Q
    |||||||||||||||| || ||| |||| ||| ||||  || |||||||||||||||||| |||||| |||||||||| ||||||||||||||| |||||    
T  36329390 aaatgggtagaaattaggtcttgctcttgtgtaagcttctaagctaatttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctc 36329488  T
Q  116 tctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||| |||||  |||| ||||| ||||||| |||||    
T  36329489 tctcccccagattaggtcatattggaccgaactgggt 36329525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 155
Target Start/End: Complemental strand, 5112384 - 5112244
Alignment:
Q  15 aaaaatgggtagaaattaagttttgttctttgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgct 114  Q
    |||||| |||| |||||| || | ||| ||| |||| | ||| |||||||||||||||| |||||||| ||||||||| |||||||||||||||| ||||    
T  5112384 aaaaataggtacaaattaggtctcgttttttatgagtttttaagctaatttcttgtaacccatttgtaacactttcatattagtggattggagagctgct 5112285  T
Q  115 ctctcctccagaggaggttatattagaccgaattgggttac 155  Q
    ||| || ||| || || | ||||| ||||||| ||||||||    
T  5112284 ctcacccccaaagtagatcatattggaccgaactgggttac 5112244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 152
Target Start/End: Original strand, 5396623 - 5396758
Alignment:
Q  17 aaatgggtagaaattaagttttgttctt-tgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctc 115  Q
    |||||||||||||||| || |||||||| ||| ||||   | |||| ||||||||||||| |||| | |||||||||| ||||||||||||||| |||||    
T  5396623 aaatgggtagaaattaggtcttgttcttgtgtaagcttgcaagctattttcttgtaactc-tttgcaacactttcatcatagtggattggagagctgctc 5396721  T
Q  116 tctcctccagaggaggttatattagaccgaattgggt 152  Q
    |||||||||||  |||| ||||| ||||||| |||||    
T  5396722 tctcctccagattaggtcatattggaccgaactgggt 5396758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 120
Target Start/End: Original strand, 3796469 - 3796574
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctt-tgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgct 114  Q
    ||||||||||||||||| || |||||||| ||  ||||  || |||||||||||||||||| |||||| |||||||||| ||||||||| ||||| ||||    
T  3796469 aaaatgggtagaaattaggtcttgttcttgtgcaagcttgtaagctaatttcttgtaactcttttgtaacactttcatcatagtggattagagagttgct 3796568  T
Q  115 ctctcc 120  Q
    ||||||    
T  3796569 ctctcc 3796574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 152
Target Start/End: Original strand, 38152389 - 38152526
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctt-tgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgct 114  Q
    ||||| ||||||||||| || |||||||| ||| ||||  || ||||||||||| |||||| |||||| |||||||| | ||||||||||||||| ||||    
T  38152389 aaaattggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttataactcttttgtaacactttcaccatagtggattggagagctgct 38152488  T
Q  115 ctctcctccagaggaggttatattagaccgaattgggt 152  Q
    |||||| |||||  | || ||||| ||||||| |||||    
T  38152489 ctctcccccagattatgtcatattggaccgaactgggt 38152526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 58 - 126
Target Start/End: Original strand, 16630673 - 16630741
Alignment:
Q  58 gctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    |||||||||||||||||| |||||| |||||||||| ||||||||||||||| || |||||||||||||    
T  16630673 gctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgttctctcctccaga 16630741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 119
Target Start/End: Original strand, 42599523 - 42599626
Alignment:
Q  16 aaaatgggtagaaattaagttttgttcttt-gtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgct 114  Q
    ||||||||||||||||| || ||||||||| || ||||  || ||||||||||||||||||||| ||| || ||||||||||||||||||||| | ||||    
T  42599523 aaaatgggtagaaattaggtcttgttcttttgtaagcttataagctaatttcttgtaactcatt-gtaacattttcatcttagtggattggagggttgct 42599621  T
Q  115 ctctc 119  Q
    |||||    
T  42599622 ctctc 42599626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 64 - 127
Target Start/End: Original strand, 34495822 - 34495885
Alignment:
Q  64 ttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagag 127  Q
    |||||||||| ||||||||||||||||||||||||||||||||| | |||||||||| ||||||    
T  34495822 ttcttgtaacccatttgtatcactttcatcttagtggattggagggctgctctctcccccagag 34495885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 58 - 152
Target Start/End: Complemental strand, 3777652 - 3777559
Alignment:
Q  58 gctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    |||| ||||||||||||| |||||| |||||||||| ||||||||||||||| | |||||||||| |||  |||||||||| ||||||| |||||    
T  3777652 gctattttcttgtaactc-tttgtaacactttcatcatagtggattggagagctactctctcctctagattaggttatattggaccgaactgggt 3777559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 62 - 152
Target Start/End: Complemental strand, 39246094 - 39246004
Alignment:
Q  62 atttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    |||||||||||||| |||||| |||||||||| ||||||||||||| | |||||||||| |||||  |||| ||||| ||||||| |||||    
T  39246094 atttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaactgggt 39246004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 120
Target Start/End: Original strand, 6743366 - 6743470
Alignment:
Q  16 aaaatgggtagaaattaagttttgttcttt-gtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgct 114  Q
    ||||||||||||||||| || ||||||||| || |||| | | |||||||| ||||| ||| |||||| |||||||||| ||||||||||||| | ||||    
T  6743366 aaaatgggtagaaattaggtcttgttcttttgtaagctataa-gctaattttttgtagctcttttgtaacactttcatcatagtggattggagggctgct 6743464  T
Q  115 ctctcc 120  Q
    ||||||    
T  6743465 ctctcc 6743470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 146
Target Start/End: Complemental strand, 24333957 - 24333825
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctttgtg--agctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgc 113  Q
    ||||||||||||||||| ||||| ||  |||||  ||||  || |||||||| || |||||| |||||| ||| |||||| ||||||||||||||| |||    
T  24333957 aaaatgggtagaaattaggttttttttcttgtgtaagcttgtaagctaattttttataactcttttgtaacacgttcatcatagtggattggagagctgc 24333858  T
Q  114 tctctcctccagaggaggttatattagaccgaa 146  Q
    ||||||| ||| |  |||| ||||| |||||||    
T  24333857 tctctcccccaaattaggtcatattggaccgaa 24333825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 34670613 - 34670673
Alignment:
Q  13 tgaaaaatgggtagaaattaagttttgttctttgtgagctcttatgctaatttcttgtaac 73  Q
    |||||||||| ||||||||| | ||||||||||||||||| ||| ||||||||||||||||    
T  34670613 tgaaaaatggatagaaattatgatttgttctttgtgagctattaagctaatttcttgtaac 34670673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 31985633 - 31985720
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||||||||| | |||||| |||||||||| ||||||||||||||| |||||||||| |||||  |||| ||||| ||||||| |||||    
T  31985633 tttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctcc-ccagattaggtcatattggaccgaactgggt 31985720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 152
Target Start/End: Complemental strand, 54867330 - 54867194
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctt-tgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgct 114  Q
    ||||||||||||||||| || |||||||| ||| ||||  || ||||||||||| |||||  |||||| || ||||||| |||| ||||| || | ||||    
T  54867330 aaaatgggtagaaattaggtattgttcttgtgtaagcttataagctaatttcttataactattttgtaacattttcatcatagttgattgaagggctgct 54867231  T
Q  115 ctctcctccagaggaggttatattagaccgaattgggt 152  Q
    |||||| |||||  |||| ||||| ||||||| |||||    
T  54867230 ctctcc-ccagactaggtcatattggaccgaactgggt 54867194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 78 - 126
Target Start/End: Original strand, 28468542 - 28468590
Alignment:
Q  78 ttgtatcactttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    ||||| |||||||||| ||||||||||||||| ||||||||||||||||    
T  28468542 ttgtaacactttcatcatagtggattggagagctgctctctcctccaga 28468590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 45687337 - 45687267
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctttgtgagctctt--atgctaatttcttgtaactcatttgtatc 84  Q
    |||||||| |||||||| |||||||||||||||||||  |  | ||||||||||| |||||||||||||||    
T  45687337 aaaatgggaagaaattaggttttgttctttgtgagcttgtcaaagctaatttcttataactcatttgtatc 45687267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 89
Target Start/End: Original strand, 5871832 - 5871908
Alignment:
Q  14 gaaaaatgggtagaaattaagttttgttctttgtgagctc--ttatgctaatttcttgtaactcatttgtatcacttt 89  Q
    ||||||||||||||||||| |||| ||||||||||||||   ||| || ||||||||||||| ||||| |||||||||    
T  5871832 gaaaaatgggtagaaattaggttt-gttctttgtgagcttgtttaagcaaatttcttgtaacccatttttatcacttt 5871908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 152
Target Start/End: Complemental strand, 5147824 - 5147687
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctt-tgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgct 114  Q
    ||||||||||||||||| |  |||||||| ||| ||||   | |||| ||||||||||||  |||||| |||||||||| || |||| ||||||| ||||    
T  5147824 aaaatgggtagaaattaggccttgttcttgtgtaagcttgcaagctattttcttgtaactattttgtaacactttcatcataatggactggagagctgct 5147725  T
Q  115 ctctcctccagaggaggttatattagaccgaattgggt 152  Q
    | |||| ||| |  |||| ||||| ||||||| |||||    
T  5147724 ccctcccccaaattaggtcatattggaccgaactgggt 5147687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 118
Target Start/End: Original strand, 873467 - 873571
Alignment:
Q  14 gaaaaatgggtagaaattaagttttgttctttgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgc 113  Q
    |||| ||| |||||||||| | |||||| |||| ||||| ||| | ||||||||||||||  ||| |||||| | | ||| |||||||| |||||| |||    
T  873467 gaaatatgagtagaaattaggatttgttatttgcgagcttttaagttaatttcttgtaacctattggtatcattctaatcatagtggatcggagagttgc 873566  T
Q  114 tctct 118  Q
    |||||    
T  873567 tctct 873571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 5269204 - 5269272
Alignment:
Q  78 ttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaa 146  Q
    ||||| |||||||||| ||||||||||||| | |||||||||| |||||  |||| ||||| |||||||    
T  5269204 ttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaa 5269272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 126
Target Start/End: Complemental strand, 24742038 - 24741976
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    ||||||||||| | |||||| |||||||||| || |||||||||||| |||||||||| |||||    
T  24742038 tttcttgtaaccc-tttgtaacactttcatcatattggattggagagctgctctctcccccaga 24741976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 126
Target Start/End: Complemental strand, 29760739 - 29760677
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    ||||||||||| | |||||| |||||||||| || |||||||||||| |||||||||| |||||    
T  29760739 tttcttgtaaccc-tttgtaacactttcatcatattggattggagagctgctctctcccccaga 29760677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 109
Target Start/End: Original strand, 18912311 - 18912407
Alignment:
Q  13 tgaaaaatgggtagaaattaagttttgttctttgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagag 109  Q
    |||||||||| || || ||| | ||||||||||||||| |  ||  ||||||||||||| |   ||||||||||| | ||| |||||||||||||||    
T  18912311 tgaaaaatggatataatttagggtttgttctttgtgagtttgtaaactaatttcttgtatcctttttgtatcactcttatcatagtggattggagag 18912407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 127
Target Start/End: Complemental strand, 39593831 - 39593764
Alignment:
Q  59 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagag 127  Q
    |||||||||||||||| |||||||||||| | ||| ||||| | ||||||| | |||||||| ||||||    
T  39593831 ctaatttcttgtaacttatttgtatcactcttatcatagtgaagtggagagat-ctctctcccccagag 39593764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 59 - 152
Target Start/End: Complemental strand, 10832 - 10739
Alignment:
Q  59 ctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||| ||| |  |||| ||||| ||||||| |||||    
T  10832 ctaatttcttgtaactcttttgtaacactttcatcttagtggattggagagctgctctctcccccaaattaggtcatattggaccgaactgggt 10739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 54; Significance: 4e-22; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 152
Target Start/End: Complemental strand, 5830 - 5693
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctt-tgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgct 114  Q
    |||||| ||||||||||||| |||||||| ||| ||||  || |||||||||||||| ||| |||||| |||||||||| |||||||||| || | ||||    
T  5830 aaaatgagtagaaattaagtcttgttcttgtgtaagcttataagctaatttcttgtatctcttttgtaacactttcatcatagtggattgaagggctgct 5731  T
Q  115 ctctcctccagaggaggttatattagaccgaattgggt 152  Q
    |||||| |||||  |||| ||||| ||||||| |||||    
T  5730 ctctcccccagattaggtcatattggaccgaactgggt 5693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 152
Target Start/End: Complemental strand, 2639 - 2502
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctt-tgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgct 114  Q
    |||||||||||||||||  | |||||||| ||| ||||  || ||||||||||| ||| || |||||| |||||||||| ||||||||||||| | ||||    
T  2639 aaaatgggtagaaattagttcttgttcttgtgtaagcttataagctaatttcttataattcttttgtaacactttcatcatagtggattggagggctgct 2540  T
Q  115 ctctcctccagaggaggttatattagaccgaattgggt 152  Q
     ||||| |||||  |||| ||||| || |||| |||||    
T  2539 gtctcccccagattaggtcatattggagcgaactgggt 2502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 120
Target Start/End: Original strand, 133279 - 133335
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcc 120  Q
    ||||||||||||| |||||| || ||||||| ||||||||||||||| ||||||||||    
T  133279 tttcttgtaactc-tttgtaacattttcatcatagtggattggagagctgctctctcc 133335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 152
Target Start/End: Complemental strand, 85829 - 85693
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctt-tgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgct 114  Q
    ||||||||||||||||| || ||| |||| ||| |||| ||| |||||||||||||||||| |||||| |||||||||| | |||||||||||||  |||    
T  85829 aaaatgggtagaaattaggtcttgctcttgtgtaagcttttaagctaatttcttgtaactc-tttgtaacactttcatcatggtggattggagagccgct 85731  T
Q  115 ctctcctccagaggaggttatattagaccgaattgggt 152  Q
    |||||| |||||  |||| ||||| ||| ||| |||||    
T  85730 ctctcccccagattaggtcatattggactgaactgggt 85693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 8418 - 8506
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||||||||||| |||||| |||||||||| ||||||||||||||| |||||||||| |||||  |||| ||||| ||||||| |||||    
T  8418 tttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggt 8506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 17 - 152
Target Start/End: Original strand, 43913 - 44048
Alignment:
Q  17 aaatgggtagaaattaagttttgttctt-tgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctc 115  Q
    |||||||||||||||| || |||||||| | | ||||   | |||| ||||||||||||| |||||| |||||||||| ||||||||||||||| |||||    
T  43913 aaatgggtagaaattaggtcttgttcttgtataagcttgcaagctattttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctc 44011  T
Q  116 tctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||| |||||  || | ||||| ||||||| |||||    
T  44012 tctcccccagaatagatcatattggaccgaactgggt 44048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 152
Target Start/End: Original strand, 36784 - 36919
Alignment:
Q  17 aaatgggtagaaattaagttttgttctt-tgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctc 115  Q
    |||||||||||||| | || |||||||| ||| ||||   | |||| ||||||||||||| |||||| |||||||||| |||||| |||| ||| |||||    
T  36784 aaatgggtagaaatcatgtcttgttcttgtgtaagcttgcaagctattttcttgtaactc-tttgtaacactttcatcatagtgggttggcgagctgctc 36882  T
Q  116 tctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||| | | |||  |||| ||||| ||||||| |||||    
T  36883 tcttccctagattaggtcatattggaccgaactgggt 36919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 118
Target Start/End: Complemental strand, 17410 - 17307
Alignment:
Q  16 aaaatgggtagaaattaagttttgttctt-tgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgct 114  Q
    ||||| ||||||||||| || |||||||| ||| ||||  || |||||||||||||||||| |||||| |||||||||| || |||||||||| | ||||    
T  17410 aaaataggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcataatggattggagggttgct 17311  T
Q  115 ctct 118  Q
    ||||    
T  17310 ctct 17307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 124
Target Start/End: Original strand, 102442 - 102553
Alignment:
Q  13 tgaaaaatgggtagaaattaagttttgttctttgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtg 112  Q
    |||||||||||||||||||| | |||||| |||||||||| ||| | ||||||||||||||   ||||||||||| | ||| | ||||||  ||||| ||    
T  102442 tgaaaaatgggtagaaattagggtttgttttttgtgagcttttaagataatttcttgtaacctctttgtatcactcttatcattgtggatcagagagttg 102541  T
Q  113 ctctctcctcca 124  Q
     |||||| ||||    
T  102542 ttctctcttcca 102553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 126
Target Start/End: Original strand, 17951 - 18013
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    ||||||||||| | |||||| |||||||||| ||||||||||||||| |||||||||| |||||    
T  17951 tttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctcccccaga 18013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 126
Target Start/End: Original strand, 24044 - 24106
Alignment:
Q  63 tttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    ||||||||||| | |||||| |||||||||| ||||||||||||||| |||||||||| |||||    
T  24044 tttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctcccccaga 24106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 152
Target Start/End: Original strand, 15937 - 16075
Alignment:
Q  14 gaaaaatgggtagaaattaagttttgttctttgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgc 113  Q
    ||||||||||   |||||| ||||||||||||||| | | ||| ||||||||||||||||   ||||||| ||| | ||| ||||||||| ||| | ||     
T  15937 gaaaaatgggggaaaattaggttttgttctttgtgggtttttaagctaatttcttgtaacatctttgtataactcttatcatagtggattagagtgttgt 16036  T
Q  114 tctctcctccagaggaggttatattagaccgaattgggt 152  Q
    ||||| ||||| || || |||| || ||||||| |||||    
T  16037 tctcttctccatagtagattattttggaccgaactgggt 16075  T

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Target: scaffold0184 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 138
Target Start/End: Original strand, 29506 - 29566
Alignment:
Q  78 ttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatatt 138  Q
    |||||||||||||||||||||||||| ||||  || ||||||||| |||| |||| |||||    
T  29506 ttgtatcactttcatcttagtggattagagaattgttctctcctctagagtaggtcatatt 29566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 138
Target Start/End: Complemental strand, 43338 - 43278
Alignment:
Q  78 ttgtatcactttcatcttagtggattggagaggtgctctctcctccagaggaggttatatt 138  Q
    |||||||||||||||||||||||||| ||||  || ||||||||| |||| |||| |||||    
T  43338 ttgtatcactttcatcttagtggattagagaattgttctctcctctagagtaggtcatatt 43278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 73
Target Start/End: Original strand, 10515 - 10561
Alignment:
Q  27 aaattaagttttgttctttgtgagctcttatgctaatttcttgtaac 73  Q
    |||||| | |||||||||||||||||||| ||||||||| |||||||    
T  10515 aaattagggtttgttctttgtgagctcttgtgctaatttattgtaac 10561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 126
Target Start/End: Complemental strand, 45329 - 45289
Alignment:
Q  86 ctttcatcttagtggattggagaggtgctctctcctccaga 126  Q
    |||||||| ||||||||||||||| |||||||||| |||||    
T  45329 ctttcatcatagtggattggagagctgctctctcccccaga 45289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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